2021-07-13T18:26:09,834 Created temporary directory: /tmp/pip-ephem-wheel-cache-hbbmjq5j 2021-07-13T18:26:09,838 Created temporary directory: /tmp/pip-req-tracker-oom4b8e8 2021-07-13T18:26:09,838 Initialized build tracking at /tmp/pip-req-tracker-oom4b8e8 2021-07-13T18:26:09,839 Created build tracker: /tmp/pip-req-tracker-oom4b8e8 2021-07-13T18:26:09,839 Entered build tracker: /tmp/pip-req-tracker-oom4b8e8 2021-07-13T18:26:09,840 Created temporary directory: /tmp/pip-wheel-f4as0q_3 2021-07-13T18:26:09,880 1 location(s) to search for versions of scikit-bio: 2021-07-13T18:26:09,880 * https://pypi.org/simple/scikit-bio/ 2021-07-13T18:26:09,881 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2021-07-13T18:26:09,881 Getting page https://pypi.org/simple/scikit-bio/ 2021-07-13T18:26:09,883 Found index url https://pypi.org/simple 2021-07-13T18:26:10,003 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz#sha256=e68193db29015e8f861b7d548f432384aa1741575028ce9a138b39ebee66e1ed (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2021-07-13T18:26:10,004 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz#sha256=f758a5136a211cba16c8e6f1ed250f0fadb27fab436c5b7a73902dbb114618df (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2021-07-13T18:26:10,004 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz#sha256=bdd9cb68dcc5e3ffc00fa5ae21e9e0f92f1f9c2e5a24a671596bb39d0d3e02a7 (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2021-07-13T18:26:10,005 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz#sha256=11af62a5d8302da204c004b16bc625cc055e7322633b289353929ccc4b872e74 (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2021-07-13T18:26:10,005 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2021-07-13T18:26:10,006 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz#sha256=f136639c66f48d1e83b9799e044c49f0febefa4ead4b4fb7c88ec503147bdb03 (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2021-07-13T18:26:10,006 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz#sha256=348687b973be55505ec7e90c40a21921533d3b5021599705922b8c730cb8c872 (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2021-07-13T18:26:10,007 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz#sha256=adc7a3aa93ca7a3f642531e2cf64778ae243087fd6279d5354fdf157943f41cb (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2021-07-13T18:26:10,007 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz#sha256=6c5fb4b6baec0abde209d33e86e95ff4a776f653a6c3916aa95831eafe03472a (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2021-07-13T18:26:10,008 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz#sha256=5feec63b49249360d2bb55d0163d7066f530d163b5474a3319ec197e7e74c683 (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2021-07-13T18:26:10,008 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz#sha256=90a3f1ffd9401d8a8f8c1ba8fdd1ea63577fb2063209440d27e8e0834322a1e3 (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2021-07-13T18:26:10,009 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz#sha256=66e755b6c7d5b861c7eb63aeb46f4d9afe74ee0ac93c1215e0aa57003e573b0b (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2021-07-13T18:26:10,009 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz#sha256=fe33a6cd7e6eb3fd8c088491422e499cfb36fab63c38659b587230f3dd63d91a (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2021-07-13T18:26:10,010 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip#sha256=482194dd827b86fdf340d1576b07d70f8c62158d471d733fa3e73fe316afaa3a (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2021-07-13T18:26:10,010 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2021-07-13T18:26:10,011 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz#sha256=566c83249d2d338104d106c3a8ba36fa1afeabf10ead8e95b84605b71c65b743 (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2021-07-13T18:26:10,011 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2021-07-13T18:26:10,012 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz#sha256=3243f1995ef24643c09ff4d9391a79528aadd8232e5aa5d66c38d7b2e0c92f24 (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2021-07-13T18:26:10,012 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz#sha256=9fa813be66e88a994f7b7a68b8ba2216e205c525caa8585386ebdeebed6428df (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2021-07-13T18:26:10,013 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2021-07-13T18:26:10,014 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2021-07-13T18:26:10,041 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2021-07-13T18:26:10,070 Collecting scikit-bio==0.5.3 2021-07-13T18:26:10,071 Created temporary directory: /tmp/pip-unpack-xflnohky 2021-07-13T18:26:11,660 Downloading scikit-bio-0.5.3.tar.gz (8.3 MB) 2021-07-13T18:26:14,870 Added scikit-bio==0.5.3 from https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 to build tracker '/tmp/pip-req-tracker-oom4b8e8' 2021-07-13T18:26:14,872 Running setup.py (path:/tmp/pip-wheel-f4as0q_3/scikit-bio_d1ecf0dc816c4dd483746eaa7003d9eb/setup.py) egg_info for package scikit-bio 2021-07-13T18:26:14,873 Created temporary directory: /tmp/pip-pip-egg-info-dua_axjp 2021-07-13T18:26:14,873 Running command python setup.py egg_info 2021-07-13T18:26:16,451 running egg_info 2021-07-13T18:26:16,453 creating /tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info 2021-07-13T18:26:16,454 writing /tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/PKG-INFO 2021-07-13T18:26:16,457 writing dependency_links to /tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/dependency_links.txt 2021-07-13T18:26:16,459 writing requirements to /tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/requires.txt 2021-07-13T18:26:16,460 writing top-level names to /tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/top_level.txt 2021-07-13T18:26:16,462 writing manifest file '/tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/SOURCES.txt' 2021-07-13T18:26:16,940 reading manifest file '/tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/SOURCES.txt' 2021-07-13T18:26:16,942 reading manifest template 'MANIFEST.in' 2021-07-13T18:26:16,997 no previously-included directories found matching 'doc/build' 2021-07-13T18:26:16,999 no previously-included directories found matching 'doc/source/generated' 2021-07-13T18:26:17,002 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-07-13T18:26:17,006 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2021-07-13T18:26:17,009 warning: no previously-included files matching '*.so' found anywhere in distribution 2021-07-13T18:26:17,012 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2021-07-13T18:26:17,012 adding license file 'COPYING.txt' 2021-07-13T18:26:17,074 writing manifest file '/tmp/pip-pip-egg-info-dua_axjp/scikit_bio.egg-info/SOURCES.txt' 2021-07-13T18:26:17,192 Source in /tmp/pip-wheel-f4as0q_3/scikit-bio_d1ecf0dc816c4dd483746eaa7003d9eb has version 0.5.3, which satisfies requirement scikit-bio==0.5.3 from https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 2021-07-13T18:26:17,193 Removed scikit-bio==0.5.3 from https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 from build tracker '/tmp/pip-req-tracker-oom4b8e8' 2021-07-13T18:26:17,199 Created temporary directory: /tmp/pip-unpack-2ayms5k2 2021-07-13T18:26:17,199 Building wheels for collected packages: scikit-bio 2021-07-13T18:26:17,204 Created temporary directory: /tmp/pip-wheel-cmh8k7yq 2021-07-13T18:26:17,204 Building wheel for scikit-bio (setup.py): started 2021-07-13T18:26:17,205 Destination directory: /tmp/pip-wheel-cmh8k7yq 2021-07-13T18:26:17,205 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-f4as0q_3/scikit-bio_d1ecf0dc816c4dd483746eaa7003d9eb/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-f4as0q_3/scikit-bio_d1ecf0dc816c4dd483746eaa7003d9eb/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-cmh8k7yq 2021-07-13T18:26:18,748 running bdist_wheel 2021-07-13T18:26:18,958 running build 2021-07-13T18:26:18,958 running build_py 2021-07-13T18:26:19,125 creating build 2021-07-13T18:26:19,125 creating build/lib.linux-armv7l-3.9 2021-07-13T18:26:19,126 creating build/lib.linux-armv7l-3.9/benchmarks 2021-07-13T18:26:19,127 copying benchmarks/benchmarks.py -> build/lib.linux-armv7l-3.9/benchmarks 2021-07-13T18:26:19,129 copying benchmarks/__init__.py -> build/lib.linux-armv7l-3.9/benchmarks 2021-07-13T18:26:19,131 creating build/lib.linux-armv7l-3.9/skbio 2021-07-13T18:26:19,131 copying skbio/__init__.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-13T18:26:19,133 copying skbio/test.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-13T18:26:19,135 copying skbio/_base.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-13T18:26:19,137 copying skbio/workflow.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-13T18:26:19,140 creating build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-13T18:26:19,141 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-13T18:26:19,145 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-13T18:26:19,148 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-13T18:26:19,151 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-13T18:26:19,153 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-13T18:26:19,156 creating build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-13T18:26:19,157 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-13T18:26:19,160 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-13T18:26:19,163 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-13T18:26:19,166 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-13T18:26:19,169 creating build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,170 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,173 copying skbio/io/_warning.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,175 copying skbio/io/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,178 copying skbio/io/util.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,180 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,182 copying skbio/io/_exception.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,184 copying skbio/io/registry.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-13T18:26:19,189 creating build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,190 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,192 copying skbio/stats/composition.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,196 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,198 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,202 copying skbio/stats/power.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,206 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-13T18:26:19,210 creating build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:19,211 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:19,214 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:19,218 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:19,221 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:19,225 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:19,230 creating build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,232 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,236 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,240 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,243 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,246 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,248 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,252 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,257 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,260 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,263 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-13T18:26:19,268 creating build/lib.linux-armv7l-3.9/skbio/tests 2021-07-13T18:26:19,269 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-13T18:26:19,272 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-13T18:26:19,275 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-13T18:26:19,279 creating build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,281 copying skbio/util/_misc.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,284 copying skbio/util/_warning.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,286 copying skbio/util/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,289 copying skbio/util/_testing.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,292 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,296 copying skbio/util/_exception.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-13T18:26:19,300 creating build/lib.linux-armv7l-3.9/skbio/tree 2021-07-13T18:26:19,301 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-13T18:26:19,304 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-13T18:26:19,307 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-13T18:26:19,310 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-13T18:26:19,316 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-13T18:26:19,320 creating build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-13T18:26:19,321 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-13T18:26:19,325 creating build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-13T18:26:19,327 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-13T18:26:19,334 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-13T18:26:19,336 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-13T18:26:19,340 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-13T18:26:19,345 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,347 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,350 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,353 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,355 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,358 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,362 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,365 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-13T18:26:19,370 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-13T18:26:19,372 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-13T18:26:19,376 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-13T18:26:19,379 creating build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-13T18:26:19,381 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-13T18:26:19,384 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-13T18:26:19,387 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-13T18:26:19,391 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-13T18:26:19,395 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,397 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,400 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,403 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,406 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,409 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,412 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,415 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-13T18:26:19,419 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-13T18:26:19,420 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-13T18:26:19,423 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-13T18:26:19,429 creating build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,430 copying skbio/io/format/embl.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,435 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,438 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,441 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,445 copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,448 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,451 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,453 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,455 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,457 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,461 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,464 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,467 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,470 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,473 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,476 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,479 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,482 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,485 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-13T18:26:19,488 creating build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-13T18:26:19,489 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-13T18:26:19,494 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-13T18:26:19,497 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-13T18:26:19,500 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-13T18:26:19,507 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,508 copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,513 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,517 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,521 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,525 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,529 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,532 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,535 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,538 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,541 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,544 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,547 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,551 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,554 copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,558 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,561 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,565 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,568 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-13T18:26:19,572 creating build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,574 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,578 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,581 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,585 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,589 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,592 copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,596 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-13T18:26:19,600 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,602 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,605 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,608 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,611 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,614 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,618 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,621 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-13T18:26:19,626 creating build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,628 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,632 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,634 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,638 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,640 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,645 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-13T18:26:19,651 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-13T18:26:19,653 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-13T18:26:19,655 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-13T18:26:19,660 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,661 copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,665 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,667 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,670 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,673 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,676 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,678 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-13T18:26:19,682 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,683 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,687 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,690 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,692 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,694 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,697 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,700 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-13T18:26:19,703 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-13T18:26:19,704 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-13T18:26:19,706 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-13T18:26:19,710 creating build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-13T18:26:19,711 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-13T18:26:19,714 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-13T18:26:19,716 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-13T18:26:19,719 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-13T18:26:19,722 creating build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,724 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,727 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,731 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,733 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,735 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,738 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,741 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,743 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,749 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-13T18:26:19,752 creating build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-13T18:26:19,754 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-13T18:26:19,757 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-13T18:26:19,759 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-13T18:26:19,761 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-13T18:26:19,765 creating build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-13T18:26:19,766 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-13T18:26:19,770 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-13T18:26:19,772 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-13T18:26:19,775 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-13T18:26:19,914 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data 2021-07-13T18:26:19,914 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-13T18:26:19,915 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-13T18:26:19,918 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-13T18:26:19,920 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-13T18:26:19,923 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-13T18:26:19,925 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data 2021-07-13T18:26:19,925 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,927 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,929 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,932 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,934 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,937 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,939 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-13T18:26:19,941 creating build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,942 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,945 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,948 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,950 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,952 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,955 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,957 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,960 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-13T18:26:19,962 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,963 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,966 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,969 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,971 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,974 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,976 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,979 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,981 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,984 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,987 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,989 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,992 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,994 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,997 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:19,999 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,001 copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,004 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,007 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,009 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,012 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,014 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,016 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,019 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,021 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,024 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,026 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,029 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,031 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,034 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,036 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,039 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,041 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,044 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,047 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,050 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,054 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,057 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,060 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,062 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,065 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,069 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,072 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,074 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,077 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,080 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,083 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,087 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,090 copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,092 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,095 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,098 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,102 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,105 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,108 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,111 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,114 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,117 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,119 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,122 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,125 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,127 copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,130 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,132 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,135 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,138 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,141 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,145 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,148 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,151 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,154 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,157 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,160 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,162 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,165 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,168 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,171 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,174 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,177 copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,180 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,184 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,186 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,189 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,191 copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,194 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,197 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,200 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,202 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,205 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,207 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,210 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,212 copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,215 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,217 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,220 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,222 copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,225 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,228 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,232 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,235 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,238 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,241 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,244 copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,248 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,251 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,254 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,256 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,260 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,263 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,266 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,270 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,273 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,278 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,282 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,285 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,289 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,292 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,296 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,299 copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,302 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,306 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,310 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,314 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,317 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,321 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,325 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,329 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,337 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,351 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,355 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,361 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,366 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,370 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,373 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,377 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,380 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,383 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,387 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,390 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,393 copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,395 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,398 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,401 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,404 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,407 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,410 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,413 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,416 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,419 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,422 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,425 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,428 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,431 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,434 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,437 copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,440 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,443 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,446 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,449 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,452 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,455 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,458 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,461 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,464 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,467 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,472 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,475 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,479 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,481 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,484 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,487 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,490 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,493 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,496 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,499 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,502 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,506 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,509 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,511 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,514 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,517 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,520 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,522 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,525 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,527 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,529 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,532 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,535 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,537 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,540 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,542 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,545 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,548 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,550 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,553 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,556 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,558 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,561 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,563 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,565 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,568 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,570 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,573 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,575 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,578 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,580 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,583 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,585 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,588 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,590 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,593 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,595 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,598 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,600 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,603 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,605 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,608 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,610 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,612 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,615 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,618 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,620 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,623 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,625 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,628 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,630 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,633 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,635 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,638 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,640 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,643 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,645 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,648 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,651 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,653 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,656 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,659 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,661 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,664 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,667 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,669 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,672 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,674 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,677 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,679 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,681 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,684 copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,687 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,689 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,692 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,694 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,696 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,699 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,701 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,704 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,706 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,709 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,711 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,713 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,716 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,719 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,721 copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,724 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,726 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,729 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,731 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,734 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,736 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,738 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,741 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,743 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,746 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,748 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,751 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,753 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,755 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,758 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,760 copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,763 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,765 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,768 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,770 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,772 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,775 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,777 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,779 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,782 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,784 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,787 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,789 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,792 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,794 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,797 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,799 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,802 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,804 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,807 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,809 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,812 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,814 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,817 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,819 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,822 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,824 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,827 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,829 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,832 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,834 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,837 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,840 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,842 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,844 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,847 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,849 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,852 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,854 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,857 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,860 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,862 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,865 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,867 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,870 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,872 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,875 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,877 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,879 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,881 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,883 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,887 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,889 copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,891 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,893 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,895 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,897 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-13T18:26:20,899 creating build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,900 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,903 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,905 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,907 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,909 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,911 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,913 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,916 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,918 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,920 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,922 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,924 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-13T18:26:20,926 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,927 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,930 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,932 copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,934 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,937 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,939 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,941 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,943 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,946 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,949 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,951 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,953 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,956 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,958 copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,961 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,964 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,967 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,969 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,971 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,973 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,976 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,978 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,980 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,982 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-13T18:26:20,984 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:20,985 copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:20,988 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:20,990 copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:20,993 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:20,995 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:20,997 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,000 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,002 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,004 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,006 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,009 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,011 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,013 copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,016 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,018 copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,021 copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,023 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,026 copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,028 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,030 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,032 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,034 copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,037 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,039 copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,041 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,044 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,046 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,048 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,050 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,053 copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,055 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,057 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,059 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,061 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,064 copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,066 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,068 copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-13T18:26:21,095 running build_ext 2021-07-13T18:26:21,102 building 'skbio.metadata._intersection' extension 2021-07-13T18:26:21,102 creating build/temp.linux-armv7l-3.9 2021-07-13T18:26:21,103 creating build/temp.linux-armv7l-3.9/skbio 2021-07-13T18:26:21,103 creating build/temp.linux-armv7l-3.9/skbio/metadata 2021-07-13T18:26:21,104 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-3.9/skbio/metadata/_intersection.o 2021-07-13T18:26:21,739 skbio/metadata/_intersection.c: In function ‘PyInit__intersection’: 2021-07-13T18:26:21,745 skbio/metadata/_intersection.c:8617:59: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-13T18:26:21,745 8617 | __pyx_type_5skbio_8metadata_13_intersection_IntervalNode.tp_print = 0; 2021-07-13T18:26:21,745 | ^ 2021-07-13T18:26:21,751 skbio/metadata/_intersection.c:8622:58: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-13T18:26:21,752 8622 | __pyx_type_5skbio_8metadata_13_intersection_IntervalObj.tp_print = 0; 2021-07-13T18:26:21,752 | ^ 2021-07-13T18:26:21,757 skbio/metadata/_intersection.c:8626:59: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2021-07-13T18:26:21,758 8626 | __pyx_type_5skbio_8metadata_13_intersection_IntervalTree.tp_print = 0; 2021-07-13T18:26:21,758 | ^ 2021-07-13T18:26:21,768 skbio/metadata/_intersection.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-13T18:26:21,773 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,774 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,774 | ^ 2021-07-13T18:26:21,775 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,775 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,775 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,776 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,776 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,776 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,782 skbio/metadata/_intersection.c:8877:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,783 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,783 | ^ 2021-07-13T18:26:21,783 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,784 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,784 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,784 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-13T18:26:21,784 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-13T18:26:21,784 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,791 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,791 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,791 | ^ 2021-07-13T18:26:21,792 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,792 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,792 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,792 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,792 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,793 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,799 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,799 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,800 | ^ 2021-07-13T18:26:21,800 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,800 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,800 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,801 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,801 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,801 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,807 skbio/metadata/_intersection.c:8877:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,808 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,808 | ^ 2021-07-13T18:26:21,808 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,808 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,809 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,809 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-13T18:26:21,809 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-13T18:26:21,809 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,816 skbio/metadata/_intersection.c:8877:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,816 8877 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,816 | ^ 2021-07-13T18:26:21,817 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,817 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,817 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,817 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,817 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,818 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,826 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,826 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,826 | ^ 2021-07-13T18:26:21,827 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,827 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,827 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,827 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,827 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,828 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,834 skbio/metadata/_intersection.c:8893:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,834 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,834 | ^ 2021-07-13T18:26:21,835 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,835 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,835 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,836 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-13T18:26:21,836 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-13T18:26:21,836 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,842 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,843 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,843 | ^ 2021-07-13T18:26:21,843 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,843 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,844 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,844 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,844 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,844 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,851 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,851 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,851 | ^ 2021-07-13T18:26:21,852 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,852 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,852 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,852 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,852 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,853 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,859 skbio/metadata/_intersection.c:8893:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,859 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,860 | ^ 2021-07-13T18:26:21,860 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,860 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,860 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,861 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-13T18:26:21,861 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-13T18:26:21,861 | ^~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:21,867 skbio/metadata/_intersection.c:8893:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-13T18:26:21,868 8893 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-13T18:26:21,868 | ^ 2021-07-13T18:26:21,868 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-13T18:26:21,869 from /usr/include/python3.9/Python.h:97, 2021-07-13T18:26:21,869 from skbio/metadata/_intersection.c:4: 2021-07-13T18:26:21,869 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-13T18:26:21,869 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-13T18:26:21,869 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-13T18:26:22,144 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-13T18:26:22,274 Building wheel for scikit-bio (setup.py): finished with status 'error' 2021-07-13T18:26:22,275 ERROR: Failed building wheel for scikit-bio 2021-07-13T18:26:22,276 Running setup.py clean for scikit-bio 2021-07-13T18:26:22,276 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-f4as0q_3/scikit-bio_d1ecf0dc816c4dd483746eaa7003d9eb/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-f4as0q_3/scikit-bio_d1ecf0dc816c4dd483746eaa7003d9eb/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-13T18:26:23,789 running clean 2021-07-13T18:26:23,792 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-13T18:26:23,794 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-13T18:26:24,058 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-13T18:26:24,059 'build/scripts-3.9' does not exist -- can't clean it 2021-07-13T18:26:24,060 removing 'build' 2021-07-13T18:26:24,160 Failed to build scikit-bio 2021-07-13T18:26:24,160 ERROR: Failed to build one or more wheels 2021-07-13T18:26:24,161 Exception information: 2021-07-13T18:26:24,161 Traceback (most recent call last): 2021-07-13T18:26:24,161 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-13T18:26:24,161 status = self.run(options, args) 2021-07-13T18:26:24,161 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-13T18:26:24,161 return func(self, options, args) 2021-07-13T18:26:24,161 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-13T18:26:24,161 raise CommandError( 2021-07-13T18:26:24,161 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-13T18:26:24,165 Removed build tracker: '/tmp/pip-req-tracker-oom4b8e8'