2021-07-13T19:06:49,380 Created temporary directory: /tmp/pip-ephem-wheel-cache-gwj76nk7 2021-07-13T19:06:49,385 Created temporary directory: /tmp/pip-req-tracker-1m16dry4 2021-07-13T19:06:49,386 Initialized build tracking at /tmp/pip-req-tracker-1m16dry4 2021-07-13T19:06:49,386 Created build tracker: /tmp/pip-req-tracker-1m16dry4 2021-07-13T19:06:49,387 Entered build tracker: /tmp/pip-req-tracker-1m16dry4 2021-07-13T19:06:49,397 Created temporary directory: /tmp/pip-wheel-x6q6j4i3 2021-07-13T19:06:49,475 1 location(s) to search for versions of camoco: 2021-07-13T19:06:49,475 * https://pypi.org/simple/camoco/ 2021-07-13T19:06:49,476 Fetching project page and analyzing links: https://pypi.org/simple/camoco/ 2021-07-13T19:06:49,477 Getting page https://pypi.org/simple/camoco/ 2021-07-13T19:06:49,480 Found index url https://pypi.org/simple 2021-07-13T19:06:49,718 Found link https://files.pythonhosted.org/packages/43/41/d0d81fb45e70fbeb4eecd8a45e1cf580cd00221f41110291c9d81431051f/camoco-0.1.0.tar.gz#sha256=c10fe092c2ab4d1776e387cf6a71862f0dd8f676ad4a4e5c5bc3859dbb5b43e3 (from https://pypi.org/simple/camoco/), version: 0.1.0 2021-07-13T19:06:49,719 Found link https://files.pythonhosted.org/packages/ac/2a/a2d57a86796705e676e89ba06ac5ca9d6031f8257d3d191fe1b62cb3e027/camoco-0.1.1.tar.gz#sha256=163accc022c638875f41fb78bf53081d78fb83359c770c8a5dd2fe2b4959e0bf (from https://pypi.org/simple/camoco/), version: 0.1.1 2021-07-13T19:06:49,720 Found link https://files.pythonhosted.org/packages/36/76/4ead6259156a34138d5a1470a6fffe90bf84060ecbf6ba24d35ff6444556/camoco-0.1.2.tar.gz#sha256=a48a88d15143d9167866ebdf444b7d692a840d1d739d68fe634166967be13b1f (from https://pypi.org/simple/camoco/), version: 0.1.2 2021-07-13T19:06:49,721 Found link https://files.pythonhosted.org/packages/b8/39/ef06f826443955669d6b53c265239e080a7d419ab14e479fb2f0dc30e3a0/camoco-0.1.3.tar.gz#sha256=0a459a64c1a716c96f5101de7d05844f7fd49f493cb4a0778b66d1699e888a8c (from https://pypi.org/simple/camoco/), version: 0.1.3 2021-07-13T19:06:49,722 Found link https://files.pythonhosted.org/packages/2f/89/053c4d7d7e219d10a8f79a57f55b054e3d2072597332a06dbc62f567ee59/camoco-0.1.4.tar.gz#sha256=d64e9ca46de62d0605853905db625d63d12bec82fbb9b62a489d869116786670 (from https://pypi.org/simple/camoco/), version: 0.1.4 2021-07-13T19:06:49,723 Found link https://files.pythonhosted.org/packages/1b/b1/231f9627750ca9cabee0762a3682cc2bb3f30650f6a8232d8e3af32a3823/camoco-0.1.5.tar.gz#sha256=a9b2065c30a2501d90220124cd324262e774ebb88da74d4296c67f576ee5e3f6 (from https://pypi.org/simple/camoco/), version: 0.1.5 2021-07-13T19:06:49,724 Found link https://files.pythonhosted.org/packages/fa/6e/370a6eff0d3fb9ff43b0ea5899a393ccca0773a5d0ced60193672a08ca9d/camoco-0.1.6.tar.gz#sha256=01bfad661df4b0957ef74d5f7219deea4a619a31c0f92ebcbbd5cc5f35a2f14b (from https://pypi.org/simple/camoco/), version: 0.1.6 2021-07-13T19:06:49,725 Found link https://files.pythonhosted.org/packages/cb/99/3aeb19604c709bafd7be0564423b6d56ec9dbb608f9ec763b58faedf361c/camoco-0.1.7.tar.gz#sha256=5f97b9777f530dd1020efcfbc9b95c2f04dc25ccb0eafe4b377bdc83f4637e79 (from https://pypi.org/simple/camoco/), version: 0.1.7 2021-07-13T19:06:49,726 Found link https://files.pythonhosted.org/packages/86/b9/74946b1d3f0214e451528e29131ca23b99bbe78720b9981638d20838bfeb/camoco-0.1.8.tar.gz#sha256=cafb540c7417a18ee5c34e6560c25e3cef08045cc2251f78f568423036f8513e (from https://pypi.org/simple/camoco/), version: 0.1.8 2021-07-13T19:06:49,727 Found link https://files.pythonhosted.org/packages/52/a8/a249e717bcc0e09f6adfad9d9aefe49f58a611730cb5002c13ef8fa7ef55/camoco-0.6.0.tar.gz#sha256=843c0d742cc7894ca8a076b762267289910badf6486ccf82d3e615cd25d8aa88 (from https://pypi.org/simple/camoco/), version: 0.6.0 2021-07-13T19:06:49,728 Found link https://files.pythonhosted.org/packages/89/1f/b09a750aad7666bc593123781cc284d610df777a4360f6f1bd8fb0d7ff27/camoco-0.6.1.tar.gz#sha256=82e9200793e5b5cd8fd3f359508995f6cc76fc6b964c28e75341bed1c0974caf (from https://pypi.org/simple/camoco/) (requires-python:>=3.6), version: 0.6.1 2021-07-13T19:06:49,730 Found link https://files.pythonhosted.org/packages/93/58/a1a019531c166ea0c32326ff0cbb6e2c29b8b9550b3b52215facac02e214/camoco-0.6.2.tar.gz#sha256=1298ce9a26b1ce5b2861a41bb4ad6079a1ad65619b81c405f850af0cc65ed9e8 (from https://pypi.org/simple/camoco/) (requires-python:>=3.6), version: 0.6.2 2021-07-13T19:06:49,731 Link requires a different Python (3.9.2 not in: '>=3.6, <3.7'): https://files.pythonhosted.org/packages/23/0e/3616fbe340618546b8ddab8711e9f1442c2a9ff2ec315eb1cc9afd6d2123/camoco-0.6.3.tar.gz#sha256=550159a5a32949a8f28efd6d0cfde07e28859cdcd457df105a9420d2e4322fa2 (from https://pypi.org/simple/camoco/) (requires-python:>=3.6, <3.7) 2021-07-13T19:06:49,733 Link requires a different Python (3.9.2 not in: '>=3.6,<3.8'): https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f (from https://pypi.org/simple/camoco/) (requires-python:>=3.6,<3.8) 2021-07-13T19:06:49,734 Skipping link: not a file: https://pypi.org/simple/camoco/ 2021-07-13T19:06:49,765 Given no hashes to check 1 links for project 'camoco': discarding no candidates 2021-07-13T19:06:49,796 Collecting camoco==0.6.0 2021-07-13T19:06:49,800 Created temporary directory: /tmp/pip-unpack-fbeisaij 2021-07-13T19:06:50,007 Downloading camoco-0.6.0.tar.gz (100 kB) 2021-07-13T19:06:50,229 Added camoco==0.6.0 from https://files.pythonhosted.org/packages/52/a8/a249e717bcc0e09f6adfad9d9aefe49f58a611730cb5002c13ef8fa7ef55/camoco-0.6.0.tar.gz#sha256=843c0d742cc7894ca8a076b762267289910badf6486ccf82d3e615cd25d8aa88 to build tracker '/tmp/pip-req-tracker-1m16dry4' 2021-07-13T19:06:50,231 Running setup.py (path:/tmp/pip-wheel-x6q6j4i3/camoco_186b7a29d74641989a3460d2a2498608/setup.py) egg_info for package camoco 2021-07-13T19:06:50,232 Created temporary directory: /tmp/pip-pip-egg-info-i_a44qn6 2021-07-13T19:06:50,232 Running command python setup.py egg_info 2021-07-13T19:06:52,730 running egg_info 2021-07-13T19:06:52,734 creating /tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info 2021-07-13T19:06:52,736 writing /tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/PKG-INFO 2021-07-13T19:06:52,739 writing dependency_links to /tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/dependency_links.txt 2021-07-13T19:06:52,743 writing requirements to /tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/requires.txt 2021-07-13T19:06:52,745 writing top-level names to /tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/top_level.txt 2021-07-13T19:06:52,748 writing manifest file '/tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/SOURCES.txt' 2021-07-13T19:06:53,360 reading manifest file '/tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/SOURCES.txt' 2021-07-13T19:06:53,365 writing manifest file '/tmp/pip-pip-egg-info-i_a44qn6/camoco.egg-info/SOURCES.txt' 2021-07-13T19:06:53,541 Source in /tmp/pip-wheel-x6q6j4i3/camoco_186b7a29d74641989a3460d2a2498608 has version 0.6.0, which satisfies requirement camoco==0.6.0 from https://files.pythonhosted.org/packages/52/a8/a249e717bcc0e09f6adfad9d9aefe49f58a611730cb5002c13ef8fa7ef55/camoco-0.6.0.tar.gz#sha256=843c0d742cc7894ca8a076b762267289910badf6486ccf82d3e615cd25d8aa88 2021-07-13T19:06:53,542 Removed camoco==0.6.0 from https://files.pythonhosted.org/packages/52/a8/a249e717bcc0e09f6adfad9d9aefe49f58a611730cb5002c13ef8fa7ef55/camoco-0.6.0.tar.gz#sha256=843c0d742cc7894ca8a076b762267289910badf6486ccf82d3e615cd25d8aa88 from build tracker '/tmp/pip-req-tracker-1m16dry4' 2021-07-13T19:06:53,567 Created temporary directory: /tmp/pip-unpack-rf53tz1l 2021-07-13T19:06:53,569 Building wheels for collected packages: camoco 2021-07-13T19:06:53,575 Created temporary directory: /tmp/pip-wheel-r9pcwrai 2021-07-13T19:06:53,576 Building wheel for camoco (setup.py): started 2021-07-13T19:06:53,576 Destination directory: /tmp/pip-wheel-r9pcwrai 2021-07-13T19:06:53,577 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-x6q6j4i3/camoco_186b7a29d74641989a3460d2a2498608/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-x6q6j4i3/camoco_186b7a29d74641989a3460d2a2498608/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-r9pcwrai 2021-07-13T19:06:56,735 running bdist_wheel 2021-07-13T19:06:57,255 running build 2021-07-13T19:06:57,255 running build_py 2021-07-13T19:06:57,483 creating build 2021-07-13T19:06:57,484 creating build/lib.linux-armv7l-3.9 2021-07-13T19:06:57,485 creating build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,487 copying camoco/Overlap.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,492 copying camoco/Ontology.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,501 copying camoco/Camoco.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,505 copying camoco/Tools.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,509 copying camoco/Exceptions.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,513 copying camoco/Genome.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,516 copying camoco/MapOnt.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,519 copying camoco/GOnt.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,523 copying camoco/__init__.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,528 copying camoco/COB.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,534 copying camoco/Chrom.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,538 copying camoco/GWAS.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,542 copying camoco/Config.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,545 copying camoco/RefGen.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,550 copying camoco/Locus.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,554 copying camoco/Expr.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,568 copying camoco/GEO.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,571 copying camoco/SimulationAnalysis.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,575 copying camoco/Term.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,579 creating build/lib.linux-armv7l-3.9/camoco/cli 2021-07-13T19:06:57,580 copying camoco/cli/__init__.py -> build/lib.linux-armv7l-3.9/camoco/cli 2021-07-13T19:06:57,584 creating build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,585 copying camoco/cli/commands/remove.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,588 copying camoco/cli/commands/geneneighbors.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,600 copying camoco/cli/commands/locality.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,603 copying camoco/cli/commands/build.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,607 copying camoco/cli/commands/plotGWAS.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,610 copying camoco/cli/commands/__init__.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,613 copying camoco/cli/commands/list.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,616 copying camoco/cli/commands/simulateGWAS.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,620 copying camoco/cli/commands/Analysis.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,628 copying camoco/cli/commands/cistrans.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,632 copying camoco/cli/commands/crossRef.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,635 copying camoco/cli/commands/snp2gene.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,638 copying camoco/cli/commands/health.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-13T19:06:57,641 running egg_info 2021-07-13T19:06:57,689 writing camoco.egg-info/PKG-INFO 2021-07-13T19:06:57,692 writing dependency_links to camoco.egg-info/dependency_links.txt 2021-07-13T19:06:57,699 writing requirements to camoco.egg-info/requires.txt 2021-07-13T19:06:57,700 writing top-level names to camoco.egg-info/top_level.txt 2021-07-13T19:06:57,724 reading manifest file 'camoco.egg-info/SOURCES.txt' 2021-07-13T19:06:57,742 writing manifest file 'camoco.egg-info/SOURCES.txt' 2021-07-13T19:06:57,748 copying camoco/PCCUP.pyx -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,752 copying camoco/RefGenDist.pyx -> build/lib.linux-armv7l-3.9/camoco 2021-07-13T19:06:57,770 copying camoco/cli/camoco -> build/lib.linux-armv7l-3.9/camoco/cli 2021-07-13T19:06:57,781 running build_ext 2021-07-13T19:06:57,822 cythoning camoco/PCCUP.pyx to camoco/PCCUP.c 2021-07-13T19:06:58,773 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x6q6j4i3/camoco_186b7a29d74641989a3460d2a2498608/camoco/PCCUP.pyx 2021-07-13T19:06:58,774 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-13T19:07:11,383 cythoning camoco/RefGenDist.pyx to camoco/RefGenDist.c 2021-07-13T19:07:11,392 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x6q6j4i3/camoco_186b7a29d74641989a3460d2a2498608/camoco/RefGenDist.pyx 2021-07-13T19:07:11,393 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-13T19:07:21,322 building 'camoco.PCCUP' extension 2021-07-13T19:07:21,324 creating build/temp.linux-armv7l-3.9 2021-07-13T19:07:21,325 creating build/temp.linux-armv7l-3.9/camoco 2021-07-13T19:07:21,328 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c camoco/PCCUP.c -o build/temp.linux-armv7l-3.9/camoco/PCCUP.o 2021-07-13T19:07:22,151 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-13T19:07:22,152 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-13T19:07:22,152 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-13T19:07:22,152 from camoco/PCCUP.c:612: 2021-07-13T19:07:22,153 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-13T19:07:22,153 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-13T19:07:22,153 | ^~~~~~~ 2021-07-13T19:07:47,345 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/camoco/PCCUP.o -o build/lib.linux-armv7l-3.9/camoco/PCCUP.cpython-39-arm-linux-gnueabihf.so 2021-07-13T19:07:47,556 building 'camoco.RefGenDist' extension 2021-07-13T19:07:47,556 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c camoco/RefGenDist.c -o build/temp.linux-armv7l-3.9/camoco/RefGenDist.o 2021-07-13T19:07:48,244 camoco/RefGenDist.c: In function ‘__pyx_pf_6camoco_10RefGenDist_gene_distances’: 2021-07-13T19:07:48,246 camoco/RefGenDist.c:2578:35: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-13T19:07:48,246 2578 | if (unlikely(!((__pyx_v_index == __pyx_t_9) != 0))) { 2021-07-13T19:07:48,246 | ^~ 2021-07-13T19:07:48,247 camoco/RefGenDist.c:802:43: note: in definition of macro ‘unlikely’ 2021-07-13T19:07:48,247 802 | #define unlikely(x) __builtin_expect(!!(x), 0) 2021-07-13T19:07:48,247 | ^ 2021-07-13T19:08:10,898 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/camoco/RefGenDist.o -o build/lib.linux-armv7l-3.9/camoco/RefGenDist.cpython-39-arm-linux-gnueabihf.so 2021-07-13T19:08:11,163 running build_scripts 2021-07-13T19:08:11,164 creating build/scripts-3.9 2021-07-13T19:08:11,165 copying and adjusting camoco/cli/camoco -> build/scripts-3.9 2021-07-13T19:08:11,170 changing mode of build/scripts-3.9/camoco from 644 to 755 2021-07-13T19:08:11,183 installing to build/bdist.linux-armv7l/wheel 2021-07-13T19:08:11,183 running install 2021-07-13T19:08:11,185 running install_lib 2021-07-13T19:08:11,191 creating build/bdist.linux-armv7l 2021-07-13T19:08:11,193 creating build/bdist.linux-armv7l/wheel 2021-07-13T19:08:11,195 creating build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,196 copying build/lib.linux-armv7l-3.9/camoco/Overlap.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,200 copying build/lib.linux-armv7l-3.9/camoco/RefGenDist.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,221 copying build/lib.linux-armv7l-3.9/camoco/Ontology.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,225 copying build/lib.linux-armv7l-3.9/camoco/Camoco.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,229 copying build/lib.linux-armv7l-3.9/camoco/Tools.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,234 copying build/lib.linux-armv7l-3.9/camoco/Exceptions.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,237 copying build/lib.linux-armv7l-3.9/camoco/PCCUP.pyx -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,241 creating build/bdist.linux-armv7l/wheel/camoco/cli 2021-07-13T19:08:11,242 copying build/lib.linux-armv7l-3.9/camoco/cli/camoco -> build/bdist.linux-armv7l/wheel/camoco/cli 2021-07-13T19:08:11,246 copying build/lib.linux-armv7l-3.9/camoco/cli/__init__.py -> build/bdist.linux-armv7l/wheel/camoco/cli 2021-07-13T19:08:11,257 creating build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,259 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/remove.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,262 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/geneneighbors.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,265 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/locality.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,268 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/build.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,270 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/plotGWAS.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,274 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/__init__.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,277 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/list.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,279 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/simulateGWAS.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,301 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/Analysis.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,303 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/cistrans.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,306 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/crossRef.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,309 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/snp2gene.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,312 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/health.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-13T19:08:11,316 copying build/lib.linux-armv7l-3.9/camoco/Genome.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,319 copying build/lib.linux-armv7l-3.9/camoco/MapOnt.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,322 copying build/lib.linux-armv7l-3.9/camoco/GOnt.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,326 copying build/lib.linux-armv7l-3.9/camoco/RefGenDist.pyx -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,329 copying build/lib.linux-armv7l-3.9/camoco/__init__.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,332 copying build/lib.linux-armv7l-3.9/camoco/COB.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,337 copying build/lib.linux-armv7l-3.9/camoco/Chrom.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,341 copying build/lib.linux-armv7l-3.9/camoco/GWAS.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,344 copying build/lib.linux-armv7l-3.9/camoco/Config.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,347 copying build/lib.linux-armv7l-3.9/camoco/PCCUP.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,372 copying build/lib.linux-armv7l-3.9/camoco/RefGen.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,377 copying build/lib.linux-armv7l-3.9/camoco/Locus.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,380 copying build/lib.linux-armv7l-3.9/camoco/Expr.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,384 copying build/lib.linux-armv7l-3.9/camoco/GEO.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,387 copying build/lib.linux-armv7l-3.9/camoco/SimulationAnalysis.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,391 copying build/lib.linux-armv7l-3.9/camoco/Term.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-13T19:08:11,393 running install_egg_info 2021-07-13T19:08:11,407 Copying camoco.egg-info to build/bdist.linux-armv7l/wheel/camoco-0.6.0-py3.9.egg-info 2021-07-13T19:08:11,424 running install_scripts 2021-07-13T19:08:11,457 creating build/bdist.linux-armv7l/wheel/camoco-0.6.0.data 2021-07-13T19:08:11,458 creating build/bdist.linux-armv7l/wheel/camoco-0.6.0.data/scripts 2021-07-13T19:08:11,460 copying build/scripts-3.9/camoco -> build/bdist.linux-armv7l/wheel/camoco-0.6.0.data/scripts 2021-07-13T19:08:11,464 changing mode of build/bdist.linux-armv7l/wheel/camoco-0.6.0.data/scripts/camoco to 755 2021-07-13T19:08:11,537 creating build/bdist.linux-armv7l/wheel/camoco-0.6.0.dist-info/WHEEL 2021-07-13T19:08:11,542 creating '/tmp/pip-wheel-r9pcwrai/camoco-0.6.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-13T19:08:11,556 adding 'camoco/COB.py' 2021-07-13T19:08:11,560 adding 'camoco/Camoco.py' 2021-07-13T19:08:11,562 adding 'camoco/Chrom.py' 2021-07-13T19:08:11,564 adding 'camoco/Config.py' 2021-07-13T19:08:11,567 adding 'camoco/Exceptions.py' 2021-07-13T19:08:11,572 adding 'camoco/Expr.py' 2021-07-13T19:08:11,576 adding 'camoco/GEO.py' 2021-07-13T19:08:11,581 adding 'camoco/GOnt.py' 2021-07-13T19:08:11,584 adding 'camoco/GWAS.py' 2021-07-13T19:08:11,586 adding 'camoco/Genome.py' 2021-07-13T19:08:11,589 adding 'camoco/Locus.py' 2021-07-13T19:08:11,592 adding 'camoco/MapOnt.py' 2021-07-13T19:08:11,596 adding 'camoco/Ontology.py' 2021-07-13T19:08:11,602 adding 'camoco/Overlap.py' 2021-07-13T19:08:11,889 adding 'camoco/PCCUP.cpython-39-arm-linux-gnueabihf.so' 2021-07-13T19:08:11,898 adding 'camoco/PCCUP.pyx' 2021-07-13T19:08:11,905 adding 'camoco/RefGen.py' 2021-07-13T19:08:12,200 adding 'camoco/RefGenDist.cpython-39-arm-linux-gnueabihf.so' 2021-07-13T19:08:12,228 adding 'camoco/RefGenDist.pyx' 2021-07-13T19:08:12,231 adding 'camoco/SimulationAnalysis.py' 2021-07-13T19:08:12,233 adding 'camoco/Term.py' 2021-07-13T19:08:12,236 adding 'camoco/Tools.py' 2021-07-13T19:08:12,248 adding 'camoco/__init__.py' 2021-07-13T19:08:12,251 adding 'camoco/cli/__init__.py' 2021-07-13T19:08:12,255 adding 'camoco/cli/camoco' 2021-07-13T19:08:12,269 adding 'camoco/cli/commands/Analysis.py' 2021-07-13T19:08:12,271 adding 'camoco/cli/commands/__init__.py' 2021-07-13T19:08:12,274 adding 'camoco/cli/commands/build.py' 2021-07-13T19:08:12,276 adding 'camoco/cli/commands/cistrans.py' 2021-07-13T19:08:12,278 adding 'camoco/cli/commands/crossRef.py' 2021-07-13T19:08:12,288 adding 'camoco/cli/commands/geneneighbors.py' 2021-07-13T19:08:12,292 adding 'camoco/cli/commands/health.py' 2021-07-13T19:08:12,294 adding 'camoco/cli/commands/list.py' 2021-07-13T19:08:12,296 adding 'camoco/cli/commands/locality.py' 2021-07-13T19:08:12,299 adding 'camoco/cli/commands/plotGWAS.py' 2021-07-13T19:08:12,301 adding 'camoco/cli/commands/remove.py' 2021-07-13T19:08:12,304 adding 'camoco/cli/commands/simulateGWAS.py' 2021-07-13T19:08:12,307 adding 'camoco/cli/commands/snp2gene.py' 2021-07-13T19:08:12,314 adding 'camoco-0.6.0.data/scripts/camoco' 2021-07-13T19:08:12,317 adding 'camoco-0.6.0.dist-info/METADATA' 2021-07-13T19:08:12,319 adding 'camoco-0.6.0.dist-info/WHEEL' 2021-07-13T19:08:12,321 adding 'camoco-0.6.0.dist-info/top_level.txt' 2021-07-13T19:08:12,323 adding 'camoco-0.6.0.dist-info/RECORD' 2021-07-13T19:08:12,339 removing build/bdist.linux-armv7l/wheel 2021-07-13T19:08:12,965 Building wheel for camoco (setup.py): finished with status 'done' 2021-07-13T19:08:12,987 Created wheel for camoco: filename=camoco-0.6.0-cp39-cp39-linux_armv7l.whl size=780076 sha256=4bdafca9724ecc4955293e68bfabb83823855cd749021d49fb3f5067ce7d9228 2021-07-13T19:08:12,987 Stored in directory: /tmp/pip-ephem-wheel-cache-gwj76nk7/wheels/79/67/c9/21d0004c3437e9b951c546debd9e7a6758b0d9f0c9f8c090d5 2021-07-13T19:08:13,012 Successfully built camoco 2021-07-13T19:08:13,077 Removed build tracker: '/tmp/pip-req-tracker-1m16dry4'