2021-07-13T21:48:39,333 Created temporary directory: /tmp/pip-ephem-wheel-cache-ejrihg_2
2021-07-13T21:48:39,335 Created temporary directory: /tmp/pip-req-tracker-238_0aeq
2021-07-13T21:48:39,336 Initialized build tracking at /tmp/pip-req-tracker-238_0aeq
2021-07-13T21:48:39,336 Created build tracker: /tmp/pip-req-tracker-238_0aeq
2021-07-13T21:48:39,336 Entered build tracker: /tmp/pip-req-tracker-238_0aeq
2021-07-13T21:48:39,337 Created temporary directory: /tmp/pip-wheel-9t6b09cg
2021-07-13T21:48:39,368 1 location(s) to search for versions of comp-chem-py:
2021-07-13T21:48:39,368 * https://pypi.org/simple/comp-chem-py/
2021-07-13T21:48:39,368 Fetching project page and analyzing links: https://pypi.org/simple/comp-chem-py/
2021-07-13T21:48:39,369 Getting page https://pypi.org/simple/comp-chem-py/
2021-07-13T21:48:39,371 Found index url https://pypi.org/simple
2021-07-13T21:48:39,550   Found link https://files.pythonhosted.org/packages/98/3c/0b317a2890b7bc5bdfc8f1dc69714490f108b1dc50dd6bb14382904ad713/comp_chem_py-1.0.tar.gz#sha256=40fb0c5ca4c4f72b140a7e926a36a2a09700d59a603de53e7c8050c3da9c5e4f (from https://pypi.org/simple/comp-chem-py/), version: 1.0
2021-07-13T21:48:39,550 Skipping link: not a file: https://pypi.org/simple/comp-chem-py/
2021-07-13T21:48:39,569 Given no hashes to check 1 links for project 'comp-chem-py': discarding no candidates
2021-07-13T21:48:39,590 Collecting comp-chem-py==1.0
2021-07-13T21:48:39,591   Created temporary directory: /tmp/pip-unpack-xy8n55cp
2021-07-13T21:48:39,771   Downloading comp_chem_py-1.0.tar.gz (53 kB)
2021-07-13T21:48:39,883   Added comp-chem-py==1.0 from https://files.pythonhosted.org/packages/98/3c/0b317a2890b7bc5bdfc8f1dc69714490f108b1dc50dd6bb14382904ad713/comp_chem_py-1.0.tar.gz#sha256=40fb0c5ca4c4f72b140a7e926a36a2a09700d59a603de53e7c8050c3da9c5e4f to build tracker '/tmp/pip-req-tracker-238_0aeq'
2021-07-13T21:48:39,884     Running setup.py (path:/tmp/pip-wheel-9t6b09cg/comp-chem-py_e6caf9017d75404ab76bf8979385d11b/setup.py) egg_info for package comp-chem-py
2021-07-13T21:48:39,885     Created temporary directory: /tmp/pip-pip-egg-info-1u0bgdis
2021-07-13T21:48:39,885     Running command python setup.py egg_info
2021-07-13T21:48:41,080     running egg_info
2021-07-13T21:48:41,083     creating /tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info
2021-07-13T21:48:41,084     writing /tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/PKG-INFO
2021-07-13T21:48:41,086     writing dependency_links to /tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/dependency_links.txt
2021-07-13T21:48:41,088     writing requirements to /tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/requires.txt
2021-07-13T21:48:41,089     writing top-level names to /tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/top_level.txt
2021-07-13T21:48:41,091     writing manifest file '/tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/SOURCES.txt'
2021-07-13T21:48:41,285     reading manifest file '/tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/SOURCES.txt'
2021-07-13T21:48:41,290     writing manifest file '/tmp/pip-pip-egg-info-1u0bgdis/comp_chem_py.egg-info/SOURCES.txt'
2021-07-13T21:48:41,372   Source in /tmp/pip-wheel-9t6b09cg/comp-chem-py_e6caf9017d75404ab76bf8979385d11b has version 1.0, which satisfies requirement comp-chem-py==1.0 from https://files.pythonhosted.org/packages/98/3c/0b317a2890b7bc5bdfc8f1dc69714490f108b1dc50dd6bb14382904ad713/comp_chem_py-1.0.tar.gz#sha256=40fb0c5ca4c4f72b140a7e926a36a2a09700d59a603de53e7c8050c3da9c5e4f
2021-07-13T21:48:41,373   Removed comp-chem-py==1.0 from https://files.pythonhosted.org/packages/98/3c/0b317a2890b7bc5bdfc8f1dc69714490f108b1dc50dd6bb14382904ad713/comp_chem_py-1.0.tar.gz#sha256=40fb0c5ca4c4f72b140a7e926a36a2a09700d59a603de53e7c8050c3da9c5e4f from build tracker '/tmp/pip-req-tracker-238_0aeq'
2021-07-13T21:48:41,377 Created temporary directory: /tmp/pip-unpack-qgr7qsk_
2021-07-13T21:48:41,377 Building wheels for collected packages: comp-chem-py
2021-07-13T21:48:41,381   Created temporary directory: /tmp/pip-wheel-_5tnqion
2021-07-13T21:48:41,382   Building wheel for comp-chem-py (setup.py): started
2021-07-13T21:48:41,382   Destination directory: /tmp/pip-wheel-_5tnqion
2021-07-13T21:48:41,383   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9t6b09cg/comp-chem-py_e6caf9017d75404ab76bf8979385d11b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9t6b09cg/comp-chem-py_e6caf9017d75404ab76bf8979385d11b/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_5tnqion
2021-07-13T21:48:42,576   running bdist_wheel
2021-07-13T21:48:42,783   running build
2021-07-13T21:48:42,784   running build_py
2021-07-13T21:48:42,961   creating build
2021-07-13T21:48:42,961   creating build/lib
2021-07-13T21:48:42,962   creating build/lib/comp_chem_utils
2021-07-13T21:48:42,963   copying src/comp_chem_utils/pdbfile.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,966   copying src/comp_chem_utils/molecule_data.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,968   copying src/comp_chem_utils/periodic.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,971   copying src/comp_chem_utils/cpmd_utils.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,973   copying src/comp_chem_utils/amino_acids.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,975   copying src/comp_chem_utils/physcon.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,978   copying src/comp_chem_utils/conversions.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,980   copying src/comp_chem_utils/utils.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,982   copying src/comp_chem_utils/__init__.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,984   copying src/comp_chem_utils/spectrum.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,987   copying src/comp_chem_utils/mysql_tables.py -> build/lib/comp_chem_utils
2021-07-13T21:48:42,989   creating build/lib/cpmd_scripts
2021-07-13T21:48:42,991   copying src/cpmd_scripts/plot_PES.py -> build/lib/cpmd_scripts
2021-07-13T21:48:42,993   copying src/cpmd_scripts/select_state.py -> build/lib/cpmd_scripts
2021-07-13T21:48:42,995   copying src/cpmd_scripts/truncate_solvent.py -> build/lib/cpmd_scripts
2021-07-13T21:48:42,998   copying src/cpmd_scripts/__init__.py -> build/lib/cpmd_scripts
2021-07-13T21:48:42,999   copying src/cpmd_scripts/cell_size.py -> build/lib/cpmd_scripts
2021-07-13T21:48:43,002   creating build/lib/PDOS
2021-07-13T21:48:43,003   copying src/PDOS/PDOS_GUI.py -> build/lib/PDOS
2021-07-13T21:48:43,005   copying src/PDOS/__init__.py -> build/lib/PDOS
2021-07-13T21:48:43,007   copying src/PDOS/PDOS.py -> build/lib/PDOS
2021-07-13T21:48:43,009   copying src/PDOS/group_of_AOs.py -> build/lib/PDOS
2021-07-13T21:48:43,012   creating build/lib/PDOS/modules
2021-07-13T21:48:43,013   copying src/PDOS/modules/PDOS_module.py -> build/lib/PDOS/modules
2021-07-13T21:48:43,016   copying src/PDOS/modules/read_gaussian.py -> build/lib/PDOS/modules
2021-07-13T21:48:43,019   copying src/PDOS/modules/__init__.py -> build/lib/PDOS/modules
2021-07-13T21:48:43,021   creating build/lib/simp_sec_quant
2021-07-13T21:48:43,022   copying src/simp_sec_quant/simp_sec_quant.py -> build/lib/simp_sec_quant
2021-07-13T21:48:43,026   copying src/simp_sec_quant/__init__.py -> build/lib/simp_sec_quant
2021-07-13T21:48:43,027   running egg_info
2021-07-13T21:48:43,045   creating src/comp_chem_py.egg-info
2021-07-13T21:48:43,046   writing src/comp_chem_py.egg-info/PKG-INFO
2021-07-13T21:48:43,048   writing dependency_links to src/comp_chem_py.egg-info/dependency_links.txt
2021-07-13T21:48:43,050   writing requirements to src/comp_chem_py.egg-info/requires.txt
2021-07-13T21:48:43,052   writing top-level names to src/comp_chem_py.egg-info/top_level.txt
2021-07-13T21:48:43,054   writing manifest file 'src/comp_chem_py.egg-info/SOURCES.txt'
2021-07-13T21:48:43,063   reading manifest file 'src/comp_chem_py.egg-info/SOURCES.txt'
2021-07-13T21:48:43,068   writing manifest file 'src/comp_chem_py.egg-info/SOURCES.txt'
2021-07-13T21:48:43,074   running build_scripts
2021-07-13T21:48:43,075   creating build/scripts-3.9
2021-07-13T21:48:43,075   error: [Errno 2] No such file or directory: 'bin/basis_count'
2021-07-13T21:48:43,171   Building wheel for comp-chem-py (setup.py): finished with status 'error'
2021-07-13T21:48:43,172   ERROR: Failed building wheel for comp-chem-py
2021-07-13T21:48:43,172   Running setup.py clean for comp-chem-py
2021-07-13T21:48:43,173   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9t6b09cg/comp-chem-py_e6caf9017d75404ab76bf8979385d11b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9t6b09cg/comp-chem-py_e6caf9017d75404ab76bf8979385d11b/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-13T21:48:44,233   running clean
2021-07-13T21:48:44,236   removing 'build/lib' (and everything under it)
2021-07-13T21:48:44,248   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-13T21:48:44,248   removing 'build/scripts-3.9' (and everything under it)
2021-07-13T21:48:44,250   removing 'build'
2021-07-13T21:48:44,313 Failed to build comp-chem-py
2021-07-13T21:48:44,314 ERROR: Failed to build one or more wheels
2021-07-13T21:48:44,315 Exception information:
2021-07-13T21:48:44,315 Traceback (most recent call last):
2021-07-13T21:48:44,315   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-13T21:48:44,315     status = self.run(options, args)
2021-07-13T21:48:44,315   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-13T21:48:44,315     return func(self, options, args)
2021-07-13T21:48:44,315   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-13T21:48:44,315     raise CommandError(
2021-07-13T21:48:44,315 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-13T21:48:44,318 Removed build tracker: '/tmp/pip-req-tracker-238_0aeq'