2021-07-14T02:00:19,274 Created temporary directory: /tmp/pip-ephem-wheel-cache-ziuo7unh 2021-07-14T02:00:19,278 Created temporary directory: /tmp/pip-req-tracker-_tx8xkw8 2021-07-14T02:00:19,278 Initialized build tracking at /tmp/pip-req-tracker-_tx8xkw8 2021-07-14T02:00:19,278 Created build tracker: /tmp/pip-req-tracker-_tx8xkw8 2021-07-14T02:00:19,279 Entered build tracker: /tmp/pip-req-tracker-_tx8xkw8 2021-07-14T02:00:19,280 Created temporary directory: /tmp/pip-wheel-xftm1epa 2021-07-14T02:00:19,314 1 location(s) to search for versions of pyteomics-cythonize: 2021-07-14T02:00:19,314 * https://pypi.org/simple/pyteomics-cythonize/ 2021-07-14T02:00:19,315 Fetching project page and analyzing links: https://pypi.org/simple/pyteomics-cythonize/ 2021-07-14T02:00:19,316 Getting page https://pypi.org/simple/pyteomics-cythonize/ 2021-07-14T02:00:19,318 Found index url https://pypi.org/simple 2021-07-14T02:00:19,467 Skipping link: none of the wheel's tags (cp27-none-win_amd64) are 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candidates 2021-07-14T02:00:19,516 Collecting pyteomics-cythonize==0.2.2 2021-07-14T02:00:19,518 Created temporary directory: /tmp/pip-unpack-e3wno5ke 2021-07-14T02:00:19,747 Downloading pyteomics.cythonize-0.2.2.tar.gz (181 kB) 2021-07-14T02:00:19,903 Added pyteomics-cythonize==0.2.2 from https://files.pythonhosted.org/packages/9d/b3/254553b8959a947f35e614160c2695f7c81d19f8106cbaa8500fae36fe0c/pyteomics.cythonize-0.2.2.tar.gz#sha256=7259bcac192908a8f7da4d458bc90b4cb4542056438ab313e1196d87bc13496e to build tracker '/tmp/pip-req-tracker-_tx8xkw8' 2021-07-14T02:00:19,904 Running setup.py (path:/tmp/pip-wheel-xftm1epa/pyteomics-cythonize_b1c4a9f5818c48c4912cd3b7f4108bf7/setup.py) egg_info for package pyteomics-cythonize 2021-07-14T02:00:19,905 Created temporary directory: /tmp/pip-pip-egg-info-_aeqsk93 2021-07-14T02:00:19,905 Running command python setup.py egg_info 2021-07-14T02:00:22,201 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-xftm1epa/pyteomics-cythonize_b1c4a9f5818c48c4912cd3b7f4108bf7/pyteomics/cmass.pxd 2021-07-14T02:00:22,202 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T02:00:25,172 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-xftm1epa/pyteomics-cythonize_b1c4a9f5818c48c4912cd3b7f4108bf7/pyteomics/cparser.pxd 2021-07-14T02:00:25,173 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T02:00:26,830 Compiling pyteomics/cparser.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd. 2021-07-14T02:00:26,831 Compiling pyteomics/cmass.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd. 2021-07-14T02:00:26,831 [1/2] Cythonizing pyteomics/cmass.pyx 2021-07-14T02:00:26,832 [2/2] Cythonizing pyteomics/cparser.pyx 2021-07-14T02:00:27,056 running egg_info 2021-07-14T02:00:27,058 creating /tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info 2021-07-14T02:00:27,060 writing /tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/PKG-INFO 2021-07-14T02:00:27,063 writing dependency_links to /tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/dependency_links.txt 2021-07-14T02:00:27,064 writing namespace_packages to /tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/namespace_packages.txt 2021-07-14T02:00:27,066 writing requirements to /tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/requires.txt 2021-07-14T02:00:27,067 writing top-level names to /tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/top_level.txt 2021-07-14T02:00:27,068 writing manifest file '/tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/SOURCES.txt' 2021-07-14T02:00:27,374 reading manifest file '/tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/SOURCES.txt' 2021-07-14T02:00:27,376 reading manifest template 'MANIFEST.in' 2021-07-14T02:00:27,399 writing manifest file '/tmp/pip-pip-egg-info-_aeqsk93/pyteomics.cythonize.egg-info/SOURCES.txt' 2021-07-14T02:00:27,568 Source in /tmp/pip-wheel-xftm1epa/pyteomics-cythonize_b1c4a9f5818c48c4912cd3b7f4108bf7 has version 0.2.2, which satisfies requirement pyteomics-cythonize==0.2.2 from https://files.pythonhosted.org/packages/9d/b3/254553b8959a947f35e614160c2695f7c81d19f8106cbaa8500fae36fe0c/pyteomics.cythonize-0.2.2.tar.gz#sha256=7259bcac192908a8f7da4d458bc90b4cb4542056438ab313e1196d87bc13496e 2021-07-14T02:00:27,569 Removed pyteomics-cythonize==0.2.2 from https://files.pythonhosted.org/packages/9d/b3/254553b8959a947f35e614160c2695f7c81d19f8106cbaa8500fae36fe0c/pyteomics.cythonize-0.2.2.tar.gz#sha256=7259bcac192908a8f7da4d458bc90b4cb4542056438ab313e1196d87bc13496e from build tracker '/tmp/pip-req-tracker-_tx8xkw8' 2021-07-14T02:00:27,574 Created temporary directory: /tmp/pip-unpack-3goohqdu 2021-07-14T02:00:27,575 Building wheels for collected packages: pyteomics-cythonize 2021-07-14T02:00:27,582 Created temporary directory: /tmp/pip-wheel-iuutdxs7 2021-07-14T02:00:27,583 Building wheel for pyteomics-cythonize (setup.py): started 2021-07-14T02:00:27,584 Destination directory: /tmp/pip-wheel-iuutdxs7 2021-07-14T02:00:27,584 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-xftm1epa/pyteomics-cythonize_b1c4a9f5818c48c4912cd3b7f4108bf7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-xftm1epa/pyteomics-cythonize_b1c4a9f5818c48c4912cd3b7f4108bf7/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-iuutdxs7 2021-07-14T02:00:29,794 running bdist_wheel 2021-07-14T02:00:29,801 running build 2021-07-14T02:00:29,801 running build_py 2021-07-14T02:00:29,973 creating build 2021-07-14T02:00:29,973 creating build/lib.linux-armv7l-3.9 2021-07-14T02:00:29,974 creating build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:29,975 copying pyteomics/__init__.py -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:29,977 copying pyteomics/_capi.py -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:29,979 running egg_info 2021-07-14T02:00:29,994 writing pyteomics.cythonize.egg-info/PKG-INFO 2021-07-14T02:00:29,996 writing dependency_links to pyteomics.cythonize.egg-info/dependency_links.txt 2021-07-14T02:00:29,998 writing namespace_packages to pyteomics.cythonize.egg-info/namespace_packages.txt 2021-07-14T02:00:29,999 writing requirements to pyteomics.cythonize.egg-info/requires.txt 2021-07-14T02:00:30,000 writing top-level names to pyteomics.cythonize.egg-info/top_level.txt 2021-07-14T02:00:30,041 reading manifest file 'pyteomics.cythonize.egg-info/SOURCES.txt' 2021-07-14T02:00:30,044 reading manifest template 'MANIFEST.in' 2021-07-14T02:00:30,064 writing manifest file 'pyteomics.cythonize.egg-info/SOURCES.txt' 2021-07-14T02:00:30,067 copying pyteomics/cmass.c -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,093 copying pyteomics/cmass.pxd -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,095 copying pyteomics/cmass.pyx -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,099 copying pyteomics/cparser.c -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,112 copying pyteomics/cparser.pxd -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,114 copying pyteomics/cparser.pyx -> build/lib.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,119 running build_ext 2021-07-14T02:00:30,125 building 'pyteomics.cparser' extension 2021-07-14T02:00:30,125 creating build/temp.linux-armv7l-3.9 2021-07-14T02:00:30,126 creating build/temp.linux-armv7l-3.9/pyteomics 2021-07-14T02:00:30,127 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c pyteomics/cparser.c -o build/temp.linux-armv7l-3.9/pyteomics/cparser.o 2021-07-14T02:00:37,154 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyteomics/cparser.o -o build/lib.linux-armv7l-3.9/pyteomics/cparser.cpython-39-arm-linux-gnueabihf.so 2021-07-14T02:00:37,317 building 'pyteomics.cmass' extension 2021-07-14T02:00:37,318 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c pyteomics/cmass.c -o build/temp.linux-armv7l-3.9/pyteomics/cmass.o 2021-07-14T02:01:02,416 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyteomics/cmass.o -o build/lib.linux-armv7l-3.9/pyteomics/cmass.cpython-39-arm-linux-gnueabihf.so 2021-07-14T02:01:02,667 installing to build/bdist.linux-armv7l/wheel 2021-07-14T02:01:02,667 running install 2021-07-14T02:01:02,669 running install_lib 2021-07-14T02:01:02,676 copying pyteomics/cmass.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,771 Skipping installation of build/bdist.linux-armv7l/wheel/pyteomics/__init__.py (namespace package) 2021-07-14T02:01:02,771 copying pyteomics/cparser.pxd -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,777 copying pyteomics/_capi.py -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,783 copying pyteomics/cparser.pyx -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,788 copying pyteomics/cparser.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,808 copying pyteomics/cparser.c -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,827 copying pyteomics/cmass.c -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,851 copying pyteomics/cmass.pyx -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,855 copying pyteomics/cmass.pxd -> build/bdist.linux-armv7l/wheel/pyteomics 2021-07-14T02:01:02,859 running install_egg_info 2021-07-14T02:01:02,863 Copying pyteomics.cythonize.egg-info to build/bdist.linux-armv7l/wheel/pyteomics.cythonize-0.2.2-py3.9.egg-info 2021-07-14T02:01:02,935 Installing build/bdist.linux-armv7l/wheel/pyteomics.cythonize-0.2.2-py3.9-nspkg.pth 2021-07-14T02:01:02,937 running install_scripts 2021-07-14T02:01:03,033 creating build/bdist.linux-armv7l/wheel/pyteomics.cythonize-0.2.2.dist-info/WHEEL 2021-07-14T02:01:03,039 creating '/tmp/pip-wheel-iuutdxs7/pyteomics.cythonize-0.2.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-14T02:01:03,043 adding 'pyteomics.cythonize-0.2.2-py3.9-nspkg.pth' 2021-07-14T02:01:03,046 adding 'pyteomics/_capi.py' 2021-07-14T02:01:03,124 adding 'pyteomics/cmass.c' 2021-07-14T02:01:03,407 adding 'pyteomics/cmass.cpython-39-arm-linux-gnueabihf.so' 2021-07-14T02:01:03,443 adding 'pyteomics/cmass.pxd' 2021-07-14T02:01:03,453 adding 'pyteomics/cmass.pyx' 2021-07-14T02:01:03,495 adding 'pyteomics/cparser.c' 2021-07-14T02:01:03,591 adding 'pyteomics/cparser.cpython-39-arm-linux-gnueabihf.so' 2021-07-14T02:01:03,596 adding 'pyteomics/cparser.pxd' 2021-07-14T02:01:03,599 adding 'pyteomics/cparser.pyx' 2021-07-14T02:01:03,602 adding 'pyteomics.cythonize-0.2.2.dist-info/METADATA' 2021-07-14T02:01:03,603 adding 'pyteomics.cythonize-0.2.2.dist-info/WHEEL' 2021-07-14T02:01:03,605 adding 'pyteomics.cythonize-0.2.2.dist-info/namespace_packages.txt' 2021-07-14T02:01:03,606 adding 'pyteomics.cythonize-0.2.2.dist-info/top_level.txt' 2021-07-14T02:01:03,607 adding 'pyteomics.cythonize-0.2.2.dist-info/RECORD' 2021-07-14T02:01:03,623 removing build/bdist.linux-armv7l/wheel 2021-07-14T02:01:03,758 Building wheel for pyteomics-cythonize (setup.py): finished with status 'done' 2021-07-14T02:01:03,772 Created wheel for pyteomics-cythonize: filename=pyteomics.cythonize-0.2.2-cp39-cp39-linux_armv7l.whl size=825049 sha256=0a8804d7c25277277f587e9b53917dade1727c4598543f2bdcdd7eba02cc0a7d 2021-07-14T02:01:03,772 Stored in directory: /tmp/pip-ephem-wheel-cache-ziuo7unh/wheels/bc/aa/75/c7cf6cd945924c7223660526cf87e6ffa8b50f30994fbd027c 2021-07-14T02:01:03,782 Successfully built pyteomics-cythonize 2021-07-14T02:01:03,828 Removed build tracker: '/tmp/pip-req-tracker-_tx8xkw8'