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https://files.pythonhosted.org/packages/31/b4/f7d533c9099a7be91b964685e2d86f1986e25c45c6ec7174528f95d4c732/jcvi-1.1.6.tar.gz#sha256=c3a54f22140e4e3962f3cb05a5d9c47952d48b67d0459bf499193828018255a3 (from https://pypi.org/simple/jcvi/), version: 1.1.6 2021-07-14T03:50:22,869 Found link https://files.pythonhosted.org/packages/01/be/3ae008ee2b3a53b46f8953bbaf1c5372b5faaf790ee7c5813201d50fbdaf/jcvi-1.1.7.tar.gz#sha256=2709f0e2420da0f9d5a5da581f8f19bd54d7bb9a9720f0d0e9141f30e84b5ab2 (from https://pypi.org/simple/jcvi/), version: 1.1.7 2021-07-14T03:50:22,869 Found link https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 (from https://pypi.org/simple/jcvi/), version: 1.1.8 2021-07-14T03:50:22,869 Found link https://files.pythonhosted.org/packages/f8/da/21a544f6e7177504462669d1d882703c9d189aa18acfe4fb7ae28f541b12/jcvi-1.1.9.tar.gz#sha256=9711e6c5dec2436a4f712385ee165051e6c60c07f2ab0e2984e1139874879c77 (from https://pypi.org/simple/jcvi/), version: 1.1.9 2021-07-14T03:50:22,869 Found link https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a (from https://pypi.org/simple/jcvi/), version: 1.1.10 2021-07-14T03:50:22,870 Found link https://files.pythonhosted.org/packages/5b/36/1ed66483a5d733d87bd77466e425ef557fa4e1aa8c779b0acf02a810f822/jcvi-1.1.11.tar.gz#sha256=871ea81abb709470fc2f86038372915211dfb211901a9faed0b84714783780e7 (from https://pypi.org/simple/jcvi/), version: 1.1.11 2021-07-14T03:50:22,870 Found link https://files.pythonhosted.org/packages/7e/5c/76e236becc18806e305a68068ab84eab0eeeb862fbcea38674a7775c72c5/jcvi-1.1.12.tar.gz#sha256=9c688816d2770300a137fe0cdb7c4cdbc0f94e9f96d849cf0c1465af4464f8fe (from https://pypi.org/simple/jcvi/), version: 1.1.12 2021-07-14T03:50:22,870 Found link https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d (from https://pypi.org/simple/jcvi/), version: 1.1.13 2021-07-14T03:50:22,871 Found link https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0 (from https://pypi.org/simple/jcvi/), version: 1.1.14 2021-07-14T03:50:22,871 Found link https://files.pythonhosted.org/packages/89/97/1497942bf5ec52ada7cee1ad1961eecbe87361494812c57c9fb7cf659834/jcvi-1.1.15.tar.gz#sha256=d22c72cd566f41ca8e9e47e30ca430ec03fe06cc62dd22a652e8e0257c3a3e90 (from https://pypi.org/simple/jcvi/), version: 1.1.15 2021-07-14T03:50:22,871 Found link https://files.pythonhosted.org/packages/c6/49/63254eb560d3df5dece01e116fa6533f04b18dd76f0b51d8b778c7143864/jcvi-1.1.16.tar.gz#sha256=3e05eccc3d98c496adecb53eae0bdef7da82c1f733b2b0b859123e99e5778170 (from https://pypi.org/simple/jcvi/), version: 1.1.16 2021-07-14T03:50:22,871 Skipping link: not a file: https://pypi.org/simple/jcvi/ 2021-07-14T03:50:22,898 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2021-07-14T03:50:22,917 Collecting jcvi==0.8.12 2021-07-14T03:50:22,919 Created temporary directory: /tmp/pip-unpack-plc2fe64 2021-07-14T03:50:23,435 Downloading jcvi-0.8.12.tar.gz (790 kB) 2021-07-14T03:50:24,148 Added jcvi==0.8.12 from https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d to build tracker '/tmp/pip-req-tracker-gvashfwe' 2021-07-14T03:50:24,149 Running setup.py (path:/tmp/pip-wheel-ayqh16q8/jcvi_79cb838f09e94d37bc1405fb14d52d2a/setup.py) egg_info for package jcvi 2021-07-14T03:50:24,150 Created temporary directory: /tmp/pip-pip-egg-info-804wjqil 2021-07-14T03:50:24,150 Running command python setup.py egg_info 2021-07-14T03:50:26,182 running egg_info 2021-07-14T03:50:26,184 creating /tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info 2021-07-14T03:50:26,185 writing /tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/PKG-INFO 2021-07-14T03:50:26,188 writing dependency_links to /tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/dependency_links.txt 2021-07-14T03:50:26,190 writing requirements to /tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/requires.txt 2021-07-14T03:50:26,191 writing top-level names to /tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/top_level.txt 2021-07-14T03:50:26,193 writing manifest file '/tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/SOURCES.txt' 2021-07-14T03:50:26,352 reading manifest file '/tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/SOURCES.txt' 2021-07-14T03:50:26,354 reading manifest template 'MANIFEST.in' 2021-07-14T03:50:26,357 adding license file 'LICENSE' 2021-07-14T03:50:26,366 writing manifest file '/tmp/pip-pip-egg-info-804wjqil/jcvi.egg-info/SOURCES.txt' 2021-07-14T03:50:26,469 Source in /tmp/pip-wheel-ayqh16q8/jcvi_79cb838f09e94d37bc1405fb14d52d2a has version 0.8.12, which satisfies requirement jcvi==0.8.12 from https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d 2021-07-14T03:50:26,470 Removed jcvi==0.8.12 from https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d from build tracker '/tmp/pip-req-tracker-gvashfwe' 2021-07-14T03:50:26,475 Created temporary directory: /tmp/pip-unpack-xxq8oaeh 2021-07-14T03:50:26,475 Building wheels for collected packages: jcvi 2021-07-14T03:50:26,480 Created temporary directory: /tmp/pip-wheel-sq6ciwi7 2021-07-14T03:50:26,480 Building wheel for jcvi (setup.py): started 2021-07-14T03:50:26,481 Destination directory: /tmp/pip-wheel-sq6ciwi7 2021-07-14T03:50:26,481 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ayqh16q8/jcvi_79cb838f09e94d37bc1405fb14d52d2a/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ayqh16q8/jcvi_79cb838f09e94d37bc1405fb14d52d2a/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-sq6ciwi7 2021-07-14T03:50:28,488 running bdist_wheel 2021-07-14T03:50:28,493 running build 2021-07-14T03:50:28,493 running build_py 2021-07-14T03:50:28,629 creating build 2021-07-14T03:50:28,629 creating build/lib.linux-armv7l-3.9 2021-07-14T03:50:28,630 creating build/lib.linux-armv7l-3.9/jcvi 2021-07-14T03:50:28,631 copying ./__init__.py -> build/lib.linux-armv7l-3.9/jcvi 2021-07-14T03:50:28,633 copying ./tests.py -> build/lib.linux-armv7l-3.9/jcvi 2021-07-14T03:50:28,634 copying ./setup_helper.py -> build/lib.linux-armv7l-3.9/jcvi 2021-07-14T03:50:28,636 copying ./__main__.py -> build/lib.linux-armv7l-3.9/jcvi 2021-07-14T03:50:28,639 creating build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,640 copying ./assembly/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,642 copying ./assembly/geneticmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,645 copying ./assembly/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,646 copying ./assembly/goldenpath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,650 copying ./assembly/postprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,653 copying ./assembly/gaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,655 copying ./assembly/preprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,658 copying ./assembly/opticalmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,660 copying ./assembly/trinity.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,662 copying ./assembly/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,665 copying ./assembly/amos.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,667 copying ./assembly/hic.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,671 copying ./assembly/sspace.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,673 copying ./assembly/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,678 copying ./assembly/ca.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,681 copying ./assembly/base.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,683 copying ./assembly/pbjelly.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,686 copying ./assembly/kmer.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,688 copying ./assembly/meraculous.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,690 copying ./assembly/bambus.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,692 copying ./assembly/syntenypath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,695 copying ./assembly/soap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,697 copying ./assembly/allpaths.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,700 copying ./assembly/patch.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,703 copying ./assembly/sim.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,705 copying ./assembly/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,707 copying ./assembly/unitig.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-14T03:50:28,710 creating build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,711 copying ./projects/misc.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,714 copying ./projects/ies.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,717 copying ./projects/bites.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,719 copying ./projects/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,721 copying ./projects/tgbs.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,723 copying ./projects/pistachio.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,725 copying ./projects/napus.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,728 copying ./projects/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,731 copying ./projects/heterosis.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,733 copying ./projects/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,736 copying ./projects/age.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,739 copying ./projects/alfalfa.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,741 copying ./projects/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,743 copying ./projects/str.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,749 copying ./projects/pineapple.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-14T03:50:28,753 creating build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,754 copying ./algorithms/supermap.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,756 copying ./algorithms/maxsum.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,758 copying ./algorithms/ec.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,760 copying ./algorithms/formula.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,763 copying ./algorithms/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,764 copying ./algorithms/ml.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,766 copying ./algorithms/lis.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,768 copying ./algorithms/lpsolve.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,771 copying ./algorithms/matrix.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,774 copying ./algorithms/tsp.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,776 copying ./algorithms/graph.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,779 copying ./algorithms/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-14T03:50:28,781 creating build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,782 copying ./variation/tassel.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,784 copying ./variation/delly.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,787 copying ./variation/snp.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,789 copying ./variation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,791 copying ./variation/cnv.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,794 copying ./variation/deconvolute.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,796 copying ./variation/impute.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,799 copying ./variation/phase.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,801 copying ./variation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,802 copying ./variation/str.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-14T03:50:28,807 creating build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,808 copying ./utils/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,810 copying ./utils/taxonomy.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,812 copying ./utils/webcolors.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,815 copying ./utils/progressbar.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,818 copying ./utils/cbook.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,821 copying ./utils/brewer2mpl.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,823 copying ./utils/orderedcollections.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,826 copying ./utils/counter.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,828 copying ./utils/range.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,831 copying ./utils/ez_setup.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,833 copying ./utils/table.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,835 copying ./utils/aws.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,837 copying ./utils/natsort.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,840 copying ./utils/grouper.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,842 copying ./utils/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,844 copying ./utils/iter.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,846 copying ./utils/db.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-14T03:50:28,850 creating build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,851 copying ./apps/align.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,854 copying ./apps/gmap.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,856 copying ./apps/vecscreen.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,858 copying ./apps/ks.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,861 copying ./apps/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,863 copying ./apps/bowtie.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,865 copying ./apps/mask.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,867 copying ./apps/uclust.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,870 copying ./apps/fetch.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,872 copying ./apps/lastz.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,874 copying ./apps/biomart.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,877 copying ./apps/phylo.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,880 copying ./apps/uniprot.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,882 copying ./apps/softlink.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,884 copying ./apps/cap3.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,886 copying ./apps/base.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,890 copying ./apps/blastplus.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,892 copying ./apps/emboss.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,894 copying ./apps/grid.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,897 copying ./apps/tesseract.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,899 copying ./apps/restriction.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,901 copying ./apps/bwa.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,904 copying ./apps/r.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,906 copying ./apps/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,908 copying ./apps/gbsubmit.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,911 copying ./apps/console.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,913 copying ./apps/cdhit.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,915 copying ./apps/script.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-14T03:50:28,919 creating build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,919 copying ./graphics/align.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,922 copying ./graphics/blastplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,925 copying ./graphics/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,926 copying ./graphics/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,928 copying ./graphics/wheel.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,931 copying ./graphics/dotplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,933 copying ./graphics/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,935 copying ./graphics/grabseeds.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,938 copying ./graphics/assembly.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,941 copying ./graphics/logo.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,943 copying ./graphics/glyph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,945 copying ./graphics/base.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,948 copying ./graphics/landscape.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,951 copying ./graphics/tree.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,953 copying ./graphics/karyotype.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,956 copying ./graphics/heatmap.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,958 copying ./graphics/graph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,960 copying ./graphics/chromosome.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,962 copying ./graphics/mummerplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,965 copying ./graphics/histogram.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,967 copying ./graphics/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,969 copying ./graphics/whisker.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-14T03:50:28,972 creating build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,972 copying ./compara/quota.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,975 copying ./compara/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,977 copying ./compara/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,980 copying ./compara/reconstruct.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,983 copying ./compara/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,986 copying ./compara/pad.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,988 copying ./compara/catalog.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,991 copying ./compara/blastfilter.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,994 copying ./compara/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:28,995 copying ./compara/fractionation.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-14T03:50:29,000 creating build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,001 copying ./formats/sizes.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,003 copying ./formats/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,005 copying ./formats/contig.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,007 copying ./formats/cdt.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,009 copying ./formats/coords.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,012 copying ./formats/btab.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,014 copying ./formats/pyblast.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,016 copying ./formats/pdf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,018 copying ./formats/sam.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,021 copying ./formats/excel.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,023 copying ./formats/vcf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,027 copying ./formats/agp.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,031 copying ./formats/html.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,033 copying ./formats/fastq.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,036 copying ./formats/maf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,038 copying ./formats/obo.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,040 copying ./formats/posmap.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,043 copying ./formats/base.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,046 copying ./formats/fpc.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,048 copying ./formats/ace.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,050 copying ./formats/blast.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,054 copying ./formats/gff.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,059 copying ./formats/genbank.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,062 copying ./formats/psl.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,064 copying ./formats/bed.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,068 copying ./formats/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,070 copying ./formats/fasta.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,074 copying ./formats/chain.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,077 copying ./formats/sbt.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-14T03:50:29,080 creating build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,081 copying ./annotation/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,085 copying ./annotation/reformat.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,088 copying ./annotation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,090 copying ./annotation/qc.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,093 copying ./annotation/stats.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,096 copying ./annotation/train.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,098 copying ./annotation/evm.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,101 copying ./annotation/depth.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,103 copying ./annotation/pasa.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,106 copying ./annotation/ahrd.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,109 copying ./annotation/maker.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,112 copying ./annotation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-14T03:50:29,115 creating build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,116 copying ./utils/data/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,118 running egg_info 2021-07-14T03:50:29,134 writing jcvi.egg-info/PKG-INFO 2021-07-14T03:50:29,136 writing dependency_links to jcvi.egg-info/dependency_links.txt 2021-07-14T03:50:29,138 writing requirements to jcvi.egg-info/requires.txt 2021-07-14T03:50:29,139 writing top-level names to jcvi.egg-info/top_level.txt 2021-07-14T03:50:29,161 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2021-07-14T03:50:29,170 reading manifest template 'MANIFEST.in' 2021-07-14T03:50:29,173 adding license file 'LICENSE' 2021-07-14T03:50:29,185 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2021-07-14T03:50:29,191 copying ./utils/data/instance.json -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,194 copying ./utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,196 copying ./utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,199 copying ./utils/data/colorbrewer_all_schemes.json -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,204 copying ./utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,207 copying ./utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,210 copying ./utils/data/blosum80.mat -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,212 copying ./utils/data/adapters.fasta -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,215 copying ./utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,218 copying ./utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,222 copying ./utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,224 copying ./utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,228 copying ./utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-14T03:50:29,250 running build_ext 2021-07-14T03:50:29,339 cythoning assembly/chic.pyx to assembly/chic.c 2021-07-14T03:50:29,903 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayqh16q8/jcvi_79cb838f09e94d37bc1405fb14d52d2a/assembly/chic.pyx 2021-07-14T03:50:29,904 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T03:50:32,752 cythoning formats/cblast.pyx to formats/cblast.c 2021-07-14T03:50:32,759 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ayqh16q8/jcvi_79cb838f09e94d37bc1405fb14d52d2a/formats/cblast.pyx 2021-07-14T03:50:32,759 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T03:50:33,673 building 'jcvi.assembly.chic' extension 2021-07-14T03:50:33,674 creating build/temp.linux-armv7l-3.9 2021-07-14T03:50:33,674 creating build/temp.linux-armv7l-3.9/assembly 2021-07-14T03:50:33,675 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c assembly/chic.c -o build/temp.linux-armv7l-3.9/assembly/chic.o -O3 2021-07-14T03:50:34,085 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-14T03:50:34,085 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-14T03:50:34,085 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-14T03:50:34,085 from assembly/chic.c:612: 2021-07-14T03:50:34,085 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-14T03:50:34,086 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-14T03:50:34,086 | ^~~~~~~ 2021-07-14T03:50:37,814 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/assembly/chic.o -o build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so 2021-07-14T03:50:37,941 building 'jcvi.formats.cblast' extension 2021-07-14T03:50:37,942 creating build/temp.linux-armv7l-3.9/formats 2021-07-14T03:50:37,942 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c formats/cblast.c -o build/temp.linux-armv7l-3.9/formats/cblast.o -O3 2021-07-14T03:50:47,338 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/formats/cblast.o -o build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so 2021-07-14T03:50:47,493 installing to build/bdist.linux-armv7l/wheel 2021-07-14T03:50:47,493 running install 2021-07-14T03:50:47,495 running install_lib 2021-07-14T03:50:47,500 creating build/bdist.linux-armv7l 2021-07-14T03:50:47,500 creating build/bdist.linux-armv7l/wheel 2021-07-14T03:50:47,502 creating build/bdist.linux-armv7l/wheel/jcvi 2021-07-14T03:50:47,504 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,505 copying build/lib.linux-armv7l-3.9/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,508 copying build/lib.linux-armv7l-3.9/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,510 copying build/lib.linux-armv7l-3.9/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,512 copying build/lib.linux-armv7l-3.9/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,515 copying build/lib.linux-armv7l-3.9/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,517 copying build/lib.linux-armv7l-3.9/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,520 copying build/lib.linux-armv7l-3.9/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,522 copying build/lib.linux-armv7l-3.9/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,525 copying build/lib.linux-armv7l-3.9/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,527 copying build/lib.linux-armv7l-3.9/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,529 copying build/lib.linux-armv7l-3.9/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,531 copying build/lib.linux-armv7l-3.9/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,535 copying build/lib.linux-armv7l-3.9/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,537 copying build/lib.linux-armv7l-3.9/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,541 copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,549 copying build/lib.linux-armv7l-3.9/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,552 copying build/lib.linux-armv7l-3.9/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,555 copying build/lib.linux-armv7l-3.9/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,557 copying build/lib.linux-armv7l-3.9/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,560 copying build/lib.linux-armv7l-3.9/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,562 copying build/lib.linux-armv7l-3.9/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,564 copying build/lib.linux-armv7l-3.9/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,567 copying build/lib.linux-armv7l-3.9/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,570 copying build/lib.linux-armv7l-3.9/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,572 copying build/lib.linux-armv7l-3.9/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,576 copying build/lib.linux-armv7l-3.9/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,578 copying build/lib.linux-armv7l-3.9/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,580 copying build/lib.linux-armv7l-3.9/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-14T03:50:47,584 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,585 copying build/lib.linux-armv7l-3.9/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,588 copying build/lib.linux-armv7l-3.9/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,591 copying build/lib.linux-armv7l-3.9/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,594 copying build/lib.linux-armv7l-3.9/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,595 copying build/lib.linux-armv7l-3.9/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,599 copying build/lib.linux-armv7l-3.9/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,601 copying build/lib.linux-armv7l-3.9/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,604 copying build/lib.linux-armv7l-3.9/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,608 copying build/lib.linux-armv7l-3.9/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,610 copying build/lib.linux-armv7l-3.9/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,613 copying build/lib.linux-armv7l-3.9/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,616 copying build/lib.linux-armv7l-3.9/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,618 copying build/lib.linux-armv7l-3.9/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,620 copying build/lib.linux-armv7l-3.9/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,624 copying build/lib.linux-armv7l-3.9/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-14T03:50:47,627 copying build/lib.linux-armv7l-3.9/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-07-14T03:50:47,630 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,630 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,633 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,635 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,637 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,640 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,641 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,643 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,646 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,649 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,651 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,654 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,657 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-14T03:50:47,660 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,661 copying build/lib.linux-armv7l-3.9/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,663 copying build/lib.linux-armv7l-3.9/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,666 copying build/lib.linux-armv7l-3.9/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,669 copying build/lib.linux-armv7l-3.9/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,670 copying build/lib.linux-armv7l-3.9/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,674 copying build/lib.linux-armv7l-3.9/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,677 copying build/lib.linux-armv7l-3.9/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,679 copying build/lib.linux-armv7l-3.9/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,681 copying build/lib.linux-armv7l-3.9/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,683 copying build/lib.linux-armv7l-3.9/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-14T03:50:47,689 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,690 copying build/lib.linux-armv7l-3.9/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,691 copying build/lib.linux-armv7l-3.9/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,694 copying build/lib.linux-armv7l-3.9/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,697 copying build/lib.linux-armv7l-3.9/jcvi/utils/progressbar.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,700 copying build/lib.linux-armv7l-3.9/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,702 copying build/lib.linux-armv7l-3.9/jcvi/utils/brewer2mpl.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,705 copying build/lib.linux-armv7l-3.9/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,708 copying build/lib.linux-armv7l-3.9/jcvi/utils/counter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,710 copying build/lib.linux-armv7l-3.9/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,713 copying build/lib.linux-armv7l-3.9/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,716 copying build/lib.linux-armv7l-3.9/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,718 copying build/lib.linux-armv7l-3.9/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,721 copying build/lib.linux-armv7l-3.9/jcvi/utils/natsort.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,724 copying build/lib.linux-armv7l-3.9/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,726 copying build/lib.linux-armv7l-3.9/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,728 copying build/lib.linux-armv7l-3.9/jcvi/utils/iter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,731 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,732 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,734 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,736 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,738 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,741 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/colorbrewer_all_schemes.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,748 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,751 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,755 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,757 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,759 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,762 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,764 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,766 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,770 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-14T03:50:47,775 copying build/lib.linux-armv7l-3.9/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-14T03:50:47,779 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,780 copying build/lib.linux-armv7l-3.9/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,783 copying build/lib.linux-armv7l-3.9/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,785 copying build/lib.linux-armv7l-3.9/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,787 copying build/lib.linux-armv7l-3.9/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,791 copying build/lib.linux-armv7l-3.9/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,792 copying build/lib.linux-armv7l-3.9/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,795 copying build/lib.linux-armv7l-3.9/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,797 copying build/lib.linux-armv7l-3.9/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,800 copying build/lib.linux-armv7l-3.9/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,803 copying build/lib.linux-armv7l-3.9/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,805 copying build/lib.linux-armv7l-3.9/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,808 copying build/lib.linux-armv7l-3.9/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,811 copying build/lib.linux-armv7l-3.9/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,814 copying build/lib.linux-armv7l-3.9/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,816 copying build/lib.linux-armv7l-3.9/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,818 copying build/lib.linux-armv7l-3.9/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,823 copying build/lib.linux-armv7l-3.9/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,825 copying build/lib.linux-armv7l-3.9/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,827 copying build/lib.linux-armv7l-3.9/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,830 copying build/lib.linux-armv7l-3.9/jcvi/apps/tesseract.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,832 copying build/lib.linux-armv7l-3.9/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,835 copying build/lib.linux-armv7l-3.9/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,839 copying build/lib.linux-armv7l-3.9/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,841 copying build/lib.linux-armv7l-3.9/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,843 copying build/lib.linux-armv7l-3.9/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,846 copying build/lib.linux-armv7l-3.9/jcvi/apps/console.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,848 copying build/lib.linux-armv7l-3.9/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,851 copying build/lib.linux-armv7l-3.9/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-14T03:50:47,854 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,855 copying build/lib.linux-armv7l-3.9/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,858 copying build/lib.linux-armv7l-3.9/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,861 copying build/lib.linux-armv7l-3.9/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,862 copying build/lib.linux-armv7l-3.9/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,865 copying build/lib.linux-armv7l-3.9/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,868 copying build/lib.linux-armv7l-3.9/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,870 copying build/lib.linux-armv7l-3.9/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,873 copying build/lib.linux-armv7l-3.9/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,876 copying build/lib.linux-armv7l-3.9/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,878 copying build/lib.linux-armv7l-3.9/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,880 copying build/lib.linux-armv7l-3.9/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,883 copying build/lib.linux-armv7l-3.9/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,887 copying build/lib.linux-armv7l-3.9/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,889 copying build/lib.linux-armv7l-3.9/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,892 copying build/lib.linux-armv7l-3.9/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,895 copying build/lib.linux-armv7l-3.9/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,897 copying build/lib.linux-armv7l-3.9/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,899 copying build/lib.linux-armv7l-3.9/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,902 copying build/lib.linux-armv7l-3.9/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,904 copying build/lib.linux-armv7l-3.9/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,906 copying build/lib.linux-armv7l-3.9/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,908 copying build/lib.linux-armv7l-3.9/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-14T03:50:47,910 copying build/lib.linux-armv7l-3.9/jcvi/tests.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-07-14T03:50:47,913 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,914 copying build/lib.linux-armv7l-3.9/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,917 copying build/lib.linux-armv7l-3.9/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,918 copying build/lib.linux-armv7l-3.9/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,923 copying build/lib.linux-armv7l-3.9/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,925 copying build/lib.linux-armv7l-3.9/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,928 copying build/lib.linux-armv7l-3.9/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,931 copying build/lib.linux-armv7l-3.9/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,934 copying build/lib.linux-armv7l-3.9/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,937 copying build/lib.linux-armv7l-3.9/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,939 copying build/lib.linux-armv7l-3.9/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-14T03:50:47,943 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,944 copying build/lib.linux-armv7l-3.9/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,946 copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,972 copying build/lib.linux-armv7l-3.9/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,974 copying build/lib.linux-armv7l-3.9/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,976 copying build/lib.linux-armv7l-3.9/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,978 copying build/lib.linux-armv7l-3.9/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,980 copying build/lib.linux-armv7l-3.9/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,984 copying build/lib.linux-armv7l-3.9/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,986 copying build/lib.linux-armv7l-3.9/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,988 copying build/lib.linux-armv7l-3.9/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,991 copying build/lib.linux-armv7l-3.9/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:47,995 copying build/lib.linux-armv7l-3.9/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,012 copying build/lib.linux-armv7l-3.9/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,016 copying build/lib.linux-armv7l-3.9/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,018 copying build/lib.linux-armv7l-3.9/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,021 copying build/lib.linux-armv7l-3.9/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,023 copying build/lib.linux-armv7l-3.9/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,026 copying build/lib.linux-armv7l-3.9/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,028 copying build/lib.linux-armv7l-3.9/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,031 copying build/lib.linux-armv7l-3.9/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,034 copying build/lib.linux-armv7l-3.9/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,036 copying build/lib.linux-armv7l-3.9/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,039 copying build/lib.linux-armv7l-3.9/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,044 copying build/lib.linux-armv7l-3.9/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,047 copying build/lib.linux-armv7l-3.9/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,049 copying build/lib.linux-armv7l-3.9/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,053 copying build/lib.linux-armv7l-3.9/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,055 copying build/lib.linux-armv7l-3.9/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,059 copying build/lib.linux-armv7l-3.9/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,062 copying build/lib.linux-armv7l-3.9/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-14T03:50:48,064 copying build/lib.linux-armv7l-3.9/jcvi/setup_helper.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-07-14T03:50:48,066 copying build/lib.linux-armv7l-3.9/jcvi/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-07-14T03:50:48,069 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,070 copying build/lib.linux-armv7l-3.9/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,072 copying build/lib.linux-armv7l-3.9/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,076 copying build/lib.linux-armv7l-3.9/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,077 copying build/lib.linux-armv7l-3.9/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,080 copying build/lib.linux-armv7l-3.9/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,083 copying build/lib.linux-armv7l-3.9/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,085 copying build/lib.linux-armv7l-3.9/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,088 copying build/lib.linux-armv7l-3.9/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,090 copying build/lib.linux-armv7l-3.9/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,093 copying build/lib.linux-armv7l-3.9/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,096 copying build/lib.linux-armv7l-3.9/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,099 copying build/lib.linux-armv7l-3.9/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-14T03:50:48,101 running install_egg_info 2021-07-14T03:50:48,111 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-0.8.12-py3.9.egg-info 2021-07-14T03:50:48,127 running install_scripts 2021-07-14T03:50:48,174 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-14T03:50:48,179 creating build/bdist.linux-armv7l/wheel/jcvi-0.8.12.dist-info/WHEEL 2021-07-14T03:50:48,182 creating '/tmp/pip-wheel-sq6ciwi7/jcvi-0.8.12-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-14T03:50:48,185 adding 'jcvi/__init__.py' 2021-07-14T03:50:48,186 adding 'jcvi/__main__.py' 2021-07-14T03:50:48,188 adding 'jcvi/setup_helper.py' 2021-07-14T03:50:48,189 adding 'jcvi/tests.py' 2021-07-14T03:50:48,191 adding 'jcvi/algorithms/__init__.py' 2021-07-14T03:50:48,192 adding 'jcvi/algorithms/__main__.py' 2021-07-14T03:50:48,194 adding 'jcvi/algorithms/ec.py' 2021-07-14T03:50:48,196 adding 'jcvi/algorithms/formula.py' 2021-07-14T03:50:48,199 adding 'jcvi/algorithms/graph.py' 2021-07-14T03:50:48,201 adding 'jcvi/algorithms/lis.py' 2021-07-14T03:50:48,205 adding 'jcvi/algorithms/lpsolve.py' 2021-07-14T03:50:48,207 adding 'jcvi/algorithms/matrix.py' 2021-07-14T03:50:48,209 adding 'jcvi/algorithms/maxsum.py' 2021-07-14T03:50:48,210 adding 'jcvi/algorithms/ml.py' 2021-07-14T03:50:48,212 adding 'jcvi/algorithms/supermap.py' 2021-07-14T03:50:48,216 adding 'jcvi/algorithms/tsp.py' 2021-07-14T03:50:48,219 adding 'jcvi/annotation/__init__.py' 2021-07-14T03:50:48,220 adding 'jcvi/annotation/__main__.py' 2021-07-14T03:50:48,224 adding 'jcvi/annotation/ahrd.py' 2021-07-14T03:50:48,226 adding 'jcvi/annotation/automaton.py' 2021-07-14T03:50:48,228 adding 'jcvi/annotation/depth.py' 2021-07-14T03:50:48,230 adding 'jcvi/annotation/evm.py' 2021-07-14T03:50:48,233 adding 'jcvi/annotation/maker.py' 2021-07-14T03:50:48,237 adding 'jcvi/annotation/pasa.py' 2021-07-14T03:50:48,239 adding 'jcvi/annotation/qc.py' 2021-07-14T03:50:48,246 adding 'jcvi/annotation/reformat.py' 2021-07-14T03:50:48,248 adding 'jcvi/annotation/stats.py' 2021-07-14T03:50:48,250 adding 'jcvi/annotation/train.py' 2021-07-14T03:50:48,253 adding 'jcvi/apps/__init__.py' 2021-07-14T03:50:48,254 adding 'jcvi/apps/__main__.py' 2021-07-14T03:50:48,257 adding 'jcvi/apps/align.py' 2021-07-14T03:50:48,266 adding 'jcvi/apps/base.py' 2021-07-14T03:50:48,268 adding 'jcvi/apps/biomart.py' 2021-07-14T03:50:48,270 adding 'jcvi/apps/blastplus.py' 2021-07-14T03:50:48,272 adding 'jcvi/apps/bowtie.py' 2021-07-14T03:50:48,274 adding 'jcvi/apps/bwa.py' 2021-07-14T03:50:48,276 adding 'jcvi/apps/cap3.py' 2021-07-14T03:50:48,278 adding 'jcvi/apps/cdhit.py' 2021-07-14T03:50:48,280 adding 'jcvi/apps/console.py' 2021-07-14T03:50:48,282 adding 'jcvi/apps/emboss.py' 2021-07-14T03:50:48,285 adding 'jcvi/apps/fetch.py' 2021-07-14T03:50:48,288 adding 'jcvi/apps/gbsubmit.py' 2021-07-14T03:50:48,290 adding 'jcvi/apps/gmap.py' 2021-07-14T03:50:48,293 adding 'jcvi/apps/grid.py' 2021-07-14T03:50:48,298 adding 'jcvi/apps/ks.py' 2021-07-14T03:50:48,300 adding 'jcvi/apps/lastz.py' 2021-07-14T03:50:48,302 adding 'jcvi/apps/mask.py' 2021-07-14T03:50:48,307 adding 'jcvi/apps/phylo.py' 2021-07-14T03:50:48,309 adding 'jcvi/apps/r.py' 2021-07-14T03:50:48,311 adding 'jcvi/apps/restriction.py' 2021-07-14T03:50:48,312 adding 'jcvi/apps/script.py' 2021-07-14T03:50:48,314 adding 'jcvi/apps/softlink.py' 2021-07-14T03:50:48,316 adding 'jcvi/apps/tesseract.py' 2021-07-14T03:50:48,321 adding 'jcvi/apps/uclust.py' 2021-07-14T03:50:48,323 adding 'jcvi/apps/uniprot.py' 2021-07-14T03:50:48,325 adding 'jcvi/apps/vecscreen.py' 2021-07-14T03:50:48,328 adding 'jcvi/assembly/__init__.py' 2021-07-14T03:50:48,329 adding 'jcvi/assembly/__main__.py' 2021-07-14T03:50:48,339 adding 'jcvi/assembly/allmaps.py' 2021-07-14T03:50:48,342 adding 'jcvi/assembly/allpaths.py' 2021-07-14T03:50:48,345 adding 'jcvi/assembly/amos.py' 2021-07-14T03:50:48,347 adding 'jcvi/assembly/automaton.py' 2021-07-14T03:50:48,349 adding 'jcvi/assembly/bambus.py' 2021-07-14T03:50:48,351 adding 'jcvi/assembly/base.py' 2021-07-14T03:50:48,356 adding 'jcvi/assembly/ca.py' 2021-07-14T03:50:48,408 adding 'jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so' 2021-07-14T03:50:48,412 adding 'jcvi/assembly/coverage.py' 2021-07-14T03:50:48,414 adding 'jcvi/assembly/gaps.py' 2021-07-14T03:50:48,417 adding 'jcvi/assembly/geneticmap.py' 2021-07-14T03:50:48,422 adding 'jcvi/assembly/goldenpath.py' 2021-07-14T03:50:48,430 adding 'jcvi/assembly/hic.py' 2021-07-14T03:50:48,434 adding 'jcvi/assembly/kmer.py' 2021-07-14T03:50:48,436 adding 'jcvi/assembly/meraculous.py' 2021-07-14T03:50:48,438 adding 'jcvi/assembly/opticalmap.py' 2021-07-14T03:50:48,443 adding 'jcvi/assembly/patch.py' 2021-07-14T03:50:48,446 adding 'jcvi/assembly/pbjelly.py' 2021-07-14T03:50:48,448 adding 'jcvi/assembly/postprocess.py' 2021-07-14T03:50:48,452 adding 'jcvi/assembly/preprocess.py' 2021-07-14T03:50:48,454 adding 'jcvi/assembly/sim.py' 2021-07-14T03:50:48,456 adding 'jcvi/assembly/soap.py' 2021-07-14T03:50:48,459 adding 'jcvi/assembly/sspace.py' 2021-07-14T03:50:48,462 adding 'jcvi/assembly/syntenypath.py' 2021-07-14T03:50:48,464 adding 'jcvi/assembly/trinity.py' 2021-07-14T03:50:48,466 adding 'jcvi/assembly/unitig.py' 2021-07-14T03:50:48,468 adding 'jcvi/compara/__init__.py' 2021-07-14T03:50:48,470 adding 'jcvi/compara/__main__.py' 2021-07-14T03:50:48,472 adding 'jcvi/compara/blastfilter.py' 2021-07-14T03:50:48,476 adding 'jcvi/compara/catalog.py' 2021-07-14T03:50:48,480 adding 'jcvi/compara/fractionation.py' 2021-07-14T03:50:48,483 adding 'jcvi/compara/pad.py' 2021-07-14T03:50:48,485 adding 'jcvi/compara/quota.py' 2021-07-14T03:50:48,488 adding 'jcvi/compara/reconstruct.py' 2021-07-14T03:50:48,490 adding 'jcvi/compara/synfind.py' 2021-07-14T03:50:48,497 adding 'jcvi/compara/synteny.py' 2021-07-14T03:50:48,500 adding 'jcvi/formats/__init__.py' 2021-07-14T03:50:48,502 adding 'jcvi/formats/__main__.py' 2021-07-14T03:50:48,503 adding 'jcvi/formats/ace.py' 2021-07-14T03:50:48,511 adding 'jcvi/formats/agp.py' 2021-07-14T03:50:48,517 adding 'jcvi/formats/base.py' 2021-07-14T03:50:48,528 adding 'jcvi/formats/bed.py' 2021-07-14T03:50:48,534 adding 'jcvi/formats/blast.py' 2021-07-14T03:50:48,537 adding 'jcvi/formats/btab.py' 2021-07-14T03:50:48,671 adding 'jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so' 2021-07-14T03:50:48,678 adding 'jcvi/formats/cdt.py' 2021-07-14T03:50:48,680 adding 'jcvi/formats/chain.py' 2021-07-14T03:50:48,682 adding 'jcvi/formats/contig.py' 2021-07-14T03:50:48,685 adding 'jcvi/formats/coords.py' 2021-07-14T03:50:48,687 adding 'jcvi/formats/excel.py' 2021-07-14T03:50:48,697 adding 'jcvi/formats/fasta.py' 2021-07-14T03:50:48,702 adding 'jcvi/formats/fastq.py' 2021-07-14T03:50:48,704 adding 'jcvi/formats/fpc.py' 2021-07-14T03:50:48,706 adding 'jcvi/formats/genbank.py' 2021-07-14T03:50:48,721 adding 'jcvi/formats/gff.py' 2021-07-14T03:50:48,724 adding 'jcvi/formats/html.py' 2021-07-14T03:50:48,725 adding 'jcvi/formats/maf.py' 2021-07-14T03:50:48,727 adding 'jcvi/formats/obo.py' 2021-07-14T03:50:48,729 adding 'jcvi/formats/pdf.py' 2021-07-14T03:50:48,730 adding 'jcvi/formats/posmap.py' 2021-07-14T03:50:48,732 adding 'jcvi/formats/psl.py' 2021-07-14T03:50:48,734 adding 'jcvi/formats/pyblast.py' 2021-07-14T03:50:48,738 adding 'jcvi/formats/sam.py' 2021-07-14T03:50:48,740 adding 'jcvi/formats/sbt.py' 2021-07-14T03:50:48,743 adding 'jcvi/formats/sizes.py' 2021-07-14T03:50:48,747 adding 'jcvi/formats/vcf.py' 2021-07-14T03:50:48,749 adding 'jcvi/graphics/__init__.py' 2021-07-14T03:50:48,751 adding 'jcvi/graphics/__main__.py' 2021-07-14T03:50:48,754 adding 'jcvi/graphics/align.py' 2021-07-14T03:50:48,757 adding 'jcvi/graphics/assembly.py' 2021-07-14T03:50:48,760 adding 'jcvi/graphics/base.py' 2021-07-14T03:50:48,762 adding 'jcvi/graphics/blastplot.py' 2021-07-14T03:50:48,765 adding 'jcvi/graphics/chromosome.py' 2021-07-14T03:50:48,766 adding 'jcvi/graphics/coverage.py' 2021-07-14T03:50:48,769 adding 'jcvi/graphics/dotplot.py' 2021-07-14T03:50:48,771 adding 'jcvi/graphics/glyph.py' 2021-07-14T03:50:48,775 adding 'jcvi/graphics/grabseeds.py' 2021-07-14T03:50:48,776 adding 'jcvi/graphics/graph.py' 2021-07-14T03:50:48,778 adding 'jcvi/graphics/heatmap.py' 2021-07-14T03:50:48,779 adding 'jcvi/graphics/histogram.py' 2021-07-14T03:50:48,782 adding 'jcvi/graphics/karyotype.py' 2021-07-14T03:50:48,784 adding 'jcvi/graphics/landscape.py' 2021-07-14T03:50:48,786 adding 'jcvi/graphics/logo.py' 2021-07-14T03:50:48,787 adding 'jcvi/graphics/mummerplot.py' 2021-07-14T03:50:48,790 adding 'jcvi/graphics/synteny.py' 2021-07-14T03:50:48,792 adding 'jcvi/graphics/tree.py' 2021-07-14T03:50:48,794 adding 'jcvi/graphics/wheel.py' 2021-07-14T03:50:48,795 adding 'jcvi/graphics/whisker.py' 2021-07-14T03:50:48,797 adding 'jcvi/projects/__init__.py' 2021-07-14T03:50:48,798 adding 'jcvi/projects/__main__.py' 2021-07-14T03:50:48,801 adding 'jcvi/projects/age.py' 2021-07-14T03:50:48,802 adding 'jcvi/projects/alfalfa.py' 2021-07-14T03:50:48,805 adding 'jcvi/projects/allmaps.py' 2021-07-14T03:50:48,807 adding 'jcvi/projects/bites.py' 2021-07-14T03:50:48,808 adding 'jcvi/projects/heterosis.py' 2021-07-14T03:50:48,810 adding 'jcvi/projects/ies.py' 2021-07-14T03:50:48,813 adding 'jcvi/projects/misc.py' 2021-07-14T03:50:48,817 adding 'jcvi/projects/napus.py' 2021-07-14T03:50:48,819 adding 'jcvi/projects/pineapple.py' 2021-07-14T03:50:48,820 adding 'jcvi/projects/pistachio.py' 2021-07-14T03:50:48,829 adding 'jcvi/projects/str.py' 2021-07-14T03:50:48,832 adding 'jcvi/projects/synfind.py' 2021-07-14T03:50:48,836 adding 'jcvi/projects/tgbs.py' 2021-07-14T03:50:48,838 adding 'jcvi/utils/__init__.py' 2021-07-14T03:50:48,839 adding 'jcvi/utils/__main__.py' 2021-07-14T03:50:48,842 adding 'jcvi/utils/aws.py' 2021-07-14T03:50:48,844 adding 'jcvi/utils/brewer2mpl.py' 2021-07-14T03:50:48,847 adding 'jcvi/utils/cbook.py' 2021-07-14T03:50:48,848 adding 'jcvi/utils/counter.py' 2021-07-14T03:50:48,850 adding 'jcvi/utils/db.py' 2021-07-14T03:50:48,852 adding 'jcvi/utils/ez_setup.py' 2021-07-14T03:50:48,854 adding 'jcvi/utils/grouper.py' 2021-07-14T03:50:48,856 adding 'jcvi/utils/iter.py' 2021-07-14T03:50:48,858 adding 'jcvi/utils/natsort.py' 2021-07-14T03:50:48,860 adding 'jcvi/utils/orderedcollections.py' 2021-07-14T03:50:48,863 adding 'jcvi/utils/progressbar.py' 2021-07-14T03:50:48,866 adding 'jcvi/utils/range.py' 2021-07-14T03:50:48,867 adding 'jcvi/utils/table.py' 2021-07-14T03:50:48,869 adding 'jcvi/utils/taxonomy.py' 2021-07-14T03:50:48,872 adding 'jcvi/utils/webcolors.py' 2021-07-14T03:50:48,876 adding 'jcvi/utils/data/Airswing.ttf' 2021-07-14T03:50:48,893 adding 'jcvi/utils/data/Collegia.ttf' 2021-07-14T03:50:48,897 adding 'jcvi/utils/data/HookedUp.ttf' 2021-07-14T03:50:48,903 adding 'jcvi/utils/data/Humor-Sans.ttf' 2021-07-14T03:50:48,907 adding 'jcvi/utils/data/TREDs.meta.csv' 2021-07-14T03:50:48,909 adding 'jcvi/utils/data/__init__.py' 2021-07-14T03:50:48,910 adding 'jcvi/utils/data/adapters.fasta' 2021-07-14T03:50:48,911 adding 'jcvi/utils/data/blosum80.mat' 2021-07-14T03:50:48,913 adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc' 2021-07-14T03:50:48,918 adding 'jcvi/utils/data/colorbrewer_all_schemes.json' 2021-07-14T03:50:48,920 adding 'jcvi/utils/data/colorchecker.txt' 2021-07-14T03:50:48,926 adding 'jcvi/utils/data/hg38.band.txt' 2021-07-14T03:50:48,929 adding 'jcvi/utils/data/hg38.chrom.sizes' 2021-07-14T03:50:48,930 adding 'jcvi/utils/data/instance.json' 2021-07-14T03:50:48,932 adding 'jcvi/variation/__init__.py' 2021-07-14T03:50:48,933 adding 'jcvi/variation/__main__.py' 2021-07-14T03:50:48,938 adding 'jcvi/variation/cnv.py' 2021-07-14T03:50:48,940 adding 'jcvi/variation/deconvolute.py' 2021-07-14T03:50:48,942 adding 'jcvi/variation/delly.py' 2021-07-14T03:50:48,944 adding 'jcvi/variation/impute.py' 2021-07-14T03:50:48,946 adding 'jcvi/variation/phase.py' 2021-07-14T03:50:48,948 adding 'jcvi/variation/snp.py' 2021-07-14T03:50:48,954 adding 'jcvi/variation/str.py' 2021-07-14T03:50:48,956 adding 'jcvi/variation/tassel.py' 2021-07-14T03:50:48,959 adding 'jcvi-0.8.12.dist-info/LICENSE' 2021-07-14T03:50:48,960 adding 'jcvi-0.8.12.dist-info/METADATA' 2021-07-14T03:50:48,961 adding 'jcvi-0.8.12.dist-info/WHEEL' 2021-07-14T03:50:48,962 adding 'jcvi-0.8.12.dist-info/top_level.txt' 2021-07-14T03:50:48,965 adding 'jcvi-0.8.12.dist-info/RECORD' 2021-07-14T03:50:48,987 removing build/bdist.linux-armv7l/wheel 2021-07-14T03:50:49,286 Building wheel for jcvi (setup.py): finished with status 'done' 2021-07-14T03:50:49,305 Created wheel for jcvi: filename=jcvi-0.8.12-cp39-cp39-linux_armv7l.whl size=1214824 sha256=11b61f3e3252f7933181b4d2f54acac3b24cc94aefccbfe98ebc97bb357a0c6d 2021-07-14T03:50:49,306 Stored in directory: /tmp/pip-ephem-wheel-cache-8cupdv9n/wheels/5f/c6/62/96a34e3d8f847fa8bcc3f4b66ad6d2176d18219712c671c28b 2021-07-14T03:50:49,325 Successfully built jcvi 2021-07-14T03:50:49,366 Removed build tracker: '/tmp/pip-req-tracker-gvashfwe'