2021-07-14T07:24:59,324 Created temporary directory: /tmp/pip-ephem-wheel-cache-mmr2eycp 2021-07-14T07:24:59,327 Created temporary directory: /tmp/pip-req-tracker-ufqzcwak 2021-07-14T07:24:59,327 Initialized build tracking at /tmp/pip-req-tracker-ufqzcwak 2021-07-14T07:24:59,328 Created build tracker: /tmp/pip-req-tracker-ufqzcwak 2021-07-14T07:24:59,328 Entered build tracker: /tmp/pip-req-tracker-ufqzcwak 2021-07-14T07:24:59,328 Created temporary directory: /tmp/pip-wheel-m6hnko3a 2021-07-14T07:24:59,358 1 location(s) to search for versions of camoco: 2021-07-14T07:24:59,358 * https://pypi.org/simple/camoco/ 2021-07-14T07:24:59,359 Fetching project page and analyzing links: https://pypi.org/simple/camoco/ 2021-07-14T07:24:59,359 Getting page https://pypi.org/simple/camoco/ 2021-07-14T07:24:59,361 Found index url https://pypi.org/simple 2021-07-14T07:24:59,544 Found link https://files.pythonhosted.org/packages/43/41/d0d81fb45e70fbeb4eecd8a45e1cf580cd00221f41110291c9d81431051f/camoco-0.1.0.tar.gz#sha256=c10fe092c2ab4d1776e387cf6a71862f0dd8f676ad4a4e5c5bc3859dbb5b43e3 (from https://pypi.org/simple/camoco/), version: 0.1.0 2021-07-14T07:24:59,545 Found link https://files.pythonhosted.org/packages/ac/2a/a2d57a86796705e676e89ba06ac5ca9d6031f8257d3d191fe1b62cb3e027/camoco-0.1.1.tar.gz#sha256=163accc022c638875f41fb78bf53081d78fb83359c770c8a5dd2fe2b4959e0bf (from https://pypi.org/simple/camoco/), version: 0.1.1 2021-07-14T07:24:59,545 Found link https://files.pythonhosted.org/packages/36/76/4ead6259156a34138d5a1470a6fffe90bf84060ecbf6ba24d35ff6444556/camoco-0.1.2.tar.gz#sha256=a48a88d15143d9167866ebdf444b7d692a840d1d739d68fe634166967be13b1f (from https://pypi.org/simple/camoco/), version: 0.1.2 2021-07-14T07:24:59,545 Found link https://files.pythonhosted.org/packages/b8/39/ef06f826443955669d6b53c265239e080a7d419ab14e479fb2f0dc30e3a0/camoco-0.1.3.tar.gz#sha256=0a459a64c1a716c96f5101de7d05844f7fd49f493cb4a0778b66d1699e888a8c (from https://pypi.org/simple/camoco/), version: 0.1.3 2021-07-14T07:24:59,546 Found link https://files.pythonhosted.org/packages/2f/89/053c4d7d7e219d10a8f79a57f55b054e3d2072597332a06dbc62f567ee59/camoco-0.1.4.tar.gz#sha256=d64e9ca46de62d0605853905db625d63d12bec82fbb9b62a489d869116786670 (from https://pypi.org/simple/camoco/), version: 0.1.4 2021-07-14T07:24:59,546 Found link https://files.pythonhosted.org/packages/1b/b1/231f9627750ca9cabee0762a3682cc2bb3f30650f6a8232d8e3af32a3823/camoco-0.1.5.tar.gz#sha256=a9b2065c30a2501d90220124cd324262e774ebb88da74d4296c67f576ee5e3f6 (from https://pypi.org/simple/camoco/), version: 0.1.5 2021-07-14T07:24:59,546 Found link https://files.pythonhosted.org/packages/fa/6e/370a6eff0d3fb9ff43b0ea5899a393ccca0773a5d0ced60193672a08ca9d/camoco-0.1.6.tar.gz#sha256=01bfad661df4b0957ef74d5f7219deea4a619a31c0f92ebcbbd5cc5f35a2f14b (from https://pypi.org/simple/camoco/), version: 0.1.6 2021-07-14T07:24:59,547 Found link https://files.pythonhosted.org/packages/cb/99/3aeb19604c709bafd7be0564423b6d56ec9dbb608f9ec763b58faedf361c/camoco-0.1.7.tar.gz#sha256=5f97b9777f530dd1020efcfbc9b95c2f04dc25ccb0eafe4b377bdc83f4637e79 (from https://pypi.org/simple/camoco/), version: 0.1.7 2021-07-14T07:24:59,547 Found link https://files.pythonhosted.org/packages/86/b9/74946b1d3f0214e451528e29131ca23b99bbe78720b9981638d20838bfeb/camoco-0.1.8.tar.gz#sha256=cafb540c7417a18ee5c34e6560c25e3cef08045cc2251f78f568423036f8513e (from https://pypi.org/simple/camoco/), version: 0.1.8 2021-07-14T07:24:59,547 Found link https://files.pythonhosted.org/packages/52/a8/a249e717bcc0e09f6adfad9d9aefe49f58a611730cb5002c13ef8fa7ef55/camoco-0.6.0.tar.gz#sha256=843c0d742cc7894ca8a076b762267289910badf6486ccf82d3e615cd25d8aa88 (from https://pypi.org/simple/camoco/), version: 0.6.0 2021-07-14T07:24:59,548 Found link https://files.pythonhosted.org/packages/89/1f/b09a750aad7666bc593123781cc284d610df777a4360f6f1bd8fb0d7ff27/camoco-0.6.1.tar.gz#sha256=82e9200793e5b5cd8fd3f359508995f6cc76fc6b964c28e75341bed1c0974caf (from https://pypi.org/simple/camoco/) (requires-python:>=3.6), version: 0.6.1 2021-07-14T07:24:59,548 Found link https://files.pythonhosted.org/packages/93/58/a1a019531c166ea0c32326ff0cbb6e2c29b8b9550b3b52215facac02e214/camoco-0.6.2.tar.gz#sha256=1298ce9a26b1ce5b2861a41bb4ad6079a1ad65619b81c405f850af0cc65ed9e8 (from https://pypi.org/simple/camoco/) (requires-python:>=3.6), version: 0.6.2 2021-07-14T07:24:59,549 Link requires a different Python (3.9.2 not in: '>=3.6, <3.7'): https://files.pythonhosted.org/packages/23/0e/3616fbe340618546b8ddab8711e9f1442c2a9ff2ec315eb1cc9afd6d2123/camoco-0.6.3.tar.gz#sha256=550159a5a32949a8f28efd6d0cfde07e28859cdcd457df105a9420d2e4322fa2 (from https://pypi.org/simple/camoco/) (requires-python:>=3.6, <3.7) 2021-07-14T07:24:59,550 Link requires a different Python (3.9.2 not in: '>=3.6,<3.8'): https://files.pythonhosted.org/packages/d6/cf/de367502c08f3d8e0573d22627ce777a358353beba4747adf88b06bf3eb6/camoco-0.6.4.tar.gz#sha256=9706e85d0fa2411bd5e611f05d703cdbcb93a2eeb684a662c339af59a3e7e79f (from https://pypi.org/simple/camoco/) (requires-python:>=3.6,<3.8) 2021-07-14T07:24:59,550 Skipping link: not a file: https://pypi.org/simple/camoco/ 2021-07-14T07:24:59,570 Given no hashes to check 1 links for project 'camoco': discarding no candidates 2021-07-14T07:24:59,588 Collecting camoco==0.6.2 2021-07-14T07:24:59,590 Created temporary directory: /tmp/pip-unpack-pavs9sqm 2021-07-14T07:24:59,771 Downloading camoco-0.6.2.tar.gz (96 kB) 2021-07-14T07:24:59,907 Added camoco==0.6.2 from https://files.pythonhosted.org/packages/93/58/a1a019531c166ea0c32326ff0cbb6e2c29b8b9550b3b52215facac02e214/camoco-0.6.2.tar.gz#sha256=1298ce9a26b1ce5b2861a41bb4ad6079a1ad65619b81c405f850af0cc65ed9e8 to build tracker '/tmp/pip-req-tracker-ufqzcwak' 2021-07-14T07:24:59,908 Running setup.py (path:/tmp/pip-wheel-m6hnko3a/camoco_679bb0ec0bee40bdb4f6b629aa1fda97/setup.py) egg_info for package camoco 2021-07-14T07:24:59,908 Created temporary directory: /tmp/pip-pip-egg-info-e0702rhv 2021-07-14T07:24:59,909 Running command python setup.py egg_info 2021-07-14T07:25:01,365 running egg_info 2021-07-14T07:25:01,368 creating /tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info 2021-07-14T07:25:01,369 writing /tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/PKG-INFO 2021-07-14T07:25:01,371 writing dependency_links to /tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/dependency_links.txt 2021-07-14T07:25:01,373 writing requirements to /tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/requires.txt 2021-07-14T07:25:01,373 writing top-level names to /tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/top_level.txt 2021-07-14T07:25:01,375 writing manifest file '/tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/SOURCES.txt' 2021-07-14T07:25:01,755 reading manifest file '/tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/SOURCES.txt' 2021-07-14T07:25:01,759 writing manifest file '/tmp/pip-pip-egg-info-e0702rhv/camoco.egg-info/SOURCES.txt' 2021-07-14T07:25:01,860 Source in /tmp/pip-wheel-m6hnko3a/camoco_679bb0ec0bee40bdb4f6b629aa1fda97 has version 0.6.2, which satisfies requirement camoco==0.6.2 from https://files.pythonhosted.org/packages/93/58/a1a019531c166ea0c32326ff0cbb6e2c29b8b9550b3b52215facac02e214/camoco-0.6.2.tar.gz#sha256=1298ce9a26b1ce5b2861a41bb4ad6079a1ad65619b81c405f850af0cc65ed9e8 2021-07-14T07:25:01,861 Removed camoco==0.6.2 from https://files.pythonhosted.org/packages/93/58/a1a019531c166ea0c32326ff0cbb6e2c29b8b9550b3b52215facac02e214/camoco-0.6.2.tar.gz#sha256=1298ce9a26b1ce5b2861a41bb4ad6079a1ad65619b81c405f850af0cc65ed9e8 from build tracker '/tmp/pip-req-tracker-ufqzcwak' 2021-07-14T07:25:01,868 Created temporary directory: /tmp/pip-unpack-zql8rjwp 2021-07-14T07:25:01,868 Building wheels for collected packages: camoco 2021-07-14T07:25:01,872 Created temporary directory: /tmp/pip-wheel-bq55gd9v 2021-07-14T07:25:01,873 Building wheel for camoco (setup.py): started 2021-07-14T07:25:01,873 Destination directory: /tmp/pip-wheel-bq55gd9v 2021-07-14T07:25:01,873 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-m6hnko3a/camoco_679bb0ec0bee40bdb4f6b629aa1fda97/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-m6hnko3a/camoco_679bb0ec0bee40bdb4f6b629aa1fda97/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bq55gd9v 2021-07-14T07:25:03,246 running bdist_wheel 2021-07-14T07:25:03,443 running build 2021-07-14T07:25:03,443 running build_py 2021-07-14T07:25:03,602 creating build 2021-07-14T07:25:03,602 creating build/lib.linux-armv7l-3.9 2021-07-14T07:25:03,602 creating build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,603 copying camoco/COB.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,607 copying camoco/Ontology.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,610 copying camoco/Overlap.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,613 copying camoco/Expr.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,615 copying camoco/Config.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,617 copying camoco/Tools.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,619 copying camoco/GOnt.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,622 copying camoco/RefGen.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,626 copying camoco/Chrom.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,628 copying camoco/GWAS.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,630 copying camoco/Term.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,632 copying camoco/Exceptions.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,634 copying camoco/Genome.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,636 copying camoco/NetComp.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,638 copying camoco/Locus.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,640 copying camoco/__init__.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,642 copying camoco/Camoco.py -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,645 creating build/lib.linux-armv7l-3.9/camoco/cli 2021-07-14T07:25:03,646 copying camoco/cli/__init__.py -> build/lib.linux-armv7l-3.9/camoco/cli 2021-07-14T07:25:03,649 creating build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,650 copying camoco/cli/commands/simulateGWAS.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,653 copying camoco/cli/commands/remove.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,655 copying camoco/cli/commands/list.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,657 copying camoco/cli/commands/geneneighbors.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,659 copying camoco/cli/commands/plotGWAS.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,661 copying camoco/cli/commands/Analysis.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,663 copying camoco/cli/commands/build.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,665 copying camoco/cli/commands/locality.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,667 copying camoco/cli/commands/health.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,670 copying camoco/cli/commands/cistrans.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,671 copying camoco/cli/commands/snp2gene.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,673 copying camoco/cli/commands/__init__.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,675 copying camoco/cli/commands/crossRef.py -> build/lib.linux-armv7l-3.9/camoco/cli/commands 2021-07-14T07:25:03,676 running egg_info 2021-07-14T07:25:03,691 writing camoco.egg-info/PKG-INFO 2021-07-14T07:25:03,693 writing dependency_links to camoco.egg-info/dependency_links.txt 2021-07-14T07:25:03,695 writing requirements to camoco.egg-info/requires.txt 2021-07-14T07:25:03,696 writing top-level names to camoco.egg-info/top_level.txt 2021-07-14T07:25:03,705 reading manifest file 'camoco.egg-info/SOURCES.txt' 2021-07-14T07:25:03,712 writing manifest file 'camoco.egg-info/SOURCES.txt' 2021-07-14T07:25:03,716 copying camoco/PCCUP.pyx -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,718 copying camoco/RefGenDist.pyx -> build/lib.linux-armv7l-3.9/camoco 2021-07-14T07:25:03,720 copying camoco/cli/camoco -> build/lib.linux-armv7l-3.9/camoco/cli 2021-07-14T07:25:03,727 running build_ext 2021-07-14T07:25:03,731 cythoning camoco/PCCUP.pyx to camoco/PCCUP.c 2021-07-14T07:25:04,334 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-m6hnko3a/camoco_679bb0ec0bee40bdb4f6b629aa1fda97/camoco/PCCUP.pyx 2021-07-14T07:25:04,335 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T07:25:10,989 cythoning camoco/RefGenDist.pyx to camoco/RefGenDist.c 2021-07-14T07:25:10,996 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-m6hnko3a/camoco_679bb0ec0bee40bdb4f6b629aa1fda97/camoco/RefGenDist.pyx 2021-07-14T07:25:10,996 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T07:25:16,070 building 'camoco.PCCUP' extension 2021-07-14T07:25:16,070 creating build/temp.linux-armv7l-3.9 2021-07-14T07:25:16,071 creating build/temp.linux-armv7l-3.9/camoco 2021-07-14T07:25:16,072 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c camoco/PCCUP.c -o build/temp.linux-armv7l-3.9/camoco/PCCUP.o 2021-07-14T07:25:16,474 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-14T07:25:16,474 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-14T07:25:16,474 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-14T07:25:16,475 from camoco/PCCUP.c:612: 2021-07-14T07:25:16,475 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-14T07:25:16,475 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-14T07:25:16,475 | ^~~~~~~ 2021-07-14T07:25:30,354 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/camoco/PCCUP.o -o build/lib.linux-armv7l-3.9/camoco/PCCUP.cpython-39-arm-linux-gnueabihf.so 2021-07-14T07:25:30,530 building 'camoco.RefGenDist' extension 2021-07-14T07:25:30,530 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c camoco/RefGenDist.c -o build/temp.linux-armv7l-3.9/camoco/RefGenDist.o 2021-07-14T07:25:30,950 camoco/RefGenDist.c: In function ‘__pyx_pf_6camoco_10RefGenDist_gene_distances’: 2021-07-14T07:25:30,951 camoco/RefGenDist.c:2578:35: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-14T07:25:30,951 2578 | if (unlikely(!((__pyx_v_index == __pyx_t_9) != 0))) { 2021-07-14T07:25:30,951 | ^~ 2021-07-14T07:25:30,951 camoco/RefGenDist.c:802:43: note: in definition of macro ‘unlikely’ 2021-07-14T07:25:30,952 802 | #define unlikely(x) __builtin_expect(!!(x), 0) 2021-07-14T07:25:30,952 | ^ 2021-07-14T07:25:42,883 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/camoco/RefGenDist.o -o build/lib.linux-armv7l-3.9/camoco/RefGenDist.cpython-39-arm-linux-gnueabihf.so 2021-07-14T07:25:43,045 running build_scripts 2021-07-14T07:25:43,045 creating build/scripts-3.9 2021-07-14T07:25:43,047 copying and adjusting camoco/cli/camoco -> build/scripts-3.9 2021-07-14T07:25:43,050 changing mode of build/scripts-3.9/camoco from 644 to 755 2021-07-14T07:25:43,059 installing to build/bdist.linux-armv7l/wheel 2021-07-14T07:25:43,059 running install 2021-07-14T07:25:43,060 running install_lib 2021-07-14T07:25:43,065 creating build/bdist.linux-armv7l 2021-07-14T07:25:43,065 creating build/bdist.linux-armv7l/wheel 2021-07-14T07:25:43,067 creating build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,068 copying build/lib.linux-armv7l-3.9/camoco/COB.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,073 copying build/lib.linux-armv7l-3.9/camoco/RefGenDist.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,095 copying build/lib.linux-armv7l-3.9/camoco/PCCUP.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,120 copying build/lib.linux-armv7l-3.9/camoco/Ontology.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,122 copying build/lib.linux-armv7l-3.9/camoco/Overlap.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,125 copying build/lib.linux-armv7l-3.9/camoco/Expr.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,128 copying build/lib.linux-armv7l-3.9/camoco/Config.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,131 creating build/bdist.linux-armv7l/wheel/camoco/cli 2021-07-14T07:25:43,132 creating build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,133 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/simulateGWAS.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,136 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/remove.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,138 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/list.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,140 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/geneneighbors.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,142 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/plotGWAS.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,144 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/Analysis.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,146 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/build.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,148 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/locality.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,150 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/health.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,153 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/cistrans.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,155 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/snp2gene.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,157 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/__init__.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,158 copying build/lib.linux-armv7l-3.9/camoco/cli/commands/crossRef.py -> build/bdist.linux-armv7l/wheel/camoco/cli/commands 2021-07-14T07:25:43,161 copying build/lib.linux-armv7l-3.9/camoco/cli/camoco -> build/bdist.linux-armv7l/wheel/camoco/cli 2021-07-14T07:25:43,164 copying build/lib.linux-armv7l-3.9/camoco/cli/__init__.py -> build/bdist.linux-armv7l/wheel/camoco/cli 2021-07-14T07:25:43,166 copying build/lib.linux-armv7l-3.9/camoco/Tools.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,168 copying build/lib.linux-armv7l-3.9/camoco/GOnt.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,172 copying build/lib.linux-armv7l-3.9/camoco/RefGen.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,176 copying build/lib.linux-armv7l-3.9/camoco/Chrom.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,178 copying build/lib.linux-armv7l-3.9/camoco/RefGenDist.pyx -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,180 copying build/lib.linux-armv7l-3.9/camoco/GWAS.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,182 copying build/lib.linux-armv7l-3.9/camoco/Term.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,185 copying build/lib.linux-armv7l-3.9/camoco/Exceptions.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,187 copying build/lib.linux-armv7l-3.9/camoco/Genome.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,189 copying build/lib.linux-armv7l-3.9/camoco/NetComp.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,191 copying build/lib.linux-armv7l-3.9/camoco/Locus.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,193 copying build/lib.linux-armv7l-3.9/camoco/__init__.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,195 copying build/lib.linux-armv7l-3.9/camoco/Camoco.py -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,197 copying build/lib.linux-armv7l-3.9/camoco/PCCUP.pyx -> build/bdist.linux-armv7l/wheel/camoco 2021-07-14T07:25:43,199 running install_egg_info 2021-07-14T07:25:43,211 Copying camoco.egg-info to build/bdist.linux-armv7l/wheel/camoco-0.6.2-py3.9.egg-info 2021-07-14T07:25:43,223 running install_scripts 2021-07-14T07:25:43,246 creating build/bdist.linux-armv7l/wheel/camoco-0.6.2.data 2021-07-14T07:25:43,246 creating build/bdist.linux-armv7l/wheel/camoco-0.6.2.data/scripts 2021-07-14T07:25:43,247 copying build/scripts-3.9/camoco -> build/bdist.linux-armv7l/wheel/camoco-0.6.2.data/scripts 2021-07-14T07:25:43,250 changing mode of build/bdist.linux-armv7l/wheel/camoco-0.6.2.data/scripts/camoco to 755 2021-07-14T07:25:43,293 creating build/bdist.linux-armv7l/wheel/camoco-0.6.2.dist-info/WHEEL 2021-07-14T07:25:43,296 creating '/tmp/pip-wheel-bq55gd9v/camoco-0.6.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-14T07:25:43,308 adding 'camoco/COB.py' 2021-07-14T07:25:43,310 adding 'camoco/Camoco.py' 2021-07-14T07:25:43,311 adding 'camoco/Chrom.py' 2021-07-14T07:25:43,313 adding 'camoco/Config.py' 2021-07-14T07:25:43,314 adding 'camoco/Exceptions.py' 2021-07-14T07:25:43,318 adding 'camoco/Expr.py' 2021-07-14T07:25:43,322 adding 'camoco/GOnt.py' 2021-07-14T07:25:43,324 adding 'camoco/GWAS.py' 2021-07-14T07:25:43,325 adding 'camoco/Genome.py' 2021-07-14T07:25:43,327 adding 'camoco/Locus.py' 2021-07-14T07:25:43,328 adding 'camoco/NetComp.py' 2021-07-14T07:25:43,332 adding 'camoco/Ontology.py' 2021-07-14T07:25:43,336 adding 'camoco/Overlap.py' 2021-07-14T07:25:43,533 adding 'camoco/PCCUP.cpython-39-arm-linux-gnueabihf.so' 2021-07-14T07:25:43,542 adding 'camoco/PCCUP.pyx' 2021-07-14T07:25:43,548 adding 'camoco/RefGen.py' 2021-07-14T07:25:43,720 adding 'camoco/RefGenDist.cpython-39-arm-linux-gnueabihf.so' 2021-07-14T07:25:43,728 adding 'camoco/RefGenDist.pyx' 2021-07-14T07:25:43,729 adding 'camoco/Term.py' 2021-07-14T07:25:43,731 adding 'camoco/Tools.py' 2021-07-14T07:25:43,732 adding 'camoco/__init__.py' 2021-07-14T07:25:43,734 adding 'camoco/cli/__init__.py' 2021-07-14T07:25:43,738 adding 'camoco/cli/camoco' 2021-07-14T07:25:43,740 adding 'camoco/cli/commands/Analysis.py' 2021-07-14T07:25:43,741 adding 'camoco/cli/commands/__init__.py' 2021-07-14T07:25:43,743 adding 'camoco/cli/commands/build.py' 2021-07-14T07:25:43,744 adding 'camoco/cli/commands/cistrans.py' 2021-07-14T07:25:43,745 adding 'camoco/cli/commands/crossRef.py' 2021-07-14T07:25:43,747 adding 'camoco/cli/commands/geneneighbors.py' 2021-07-14T07:25:43,749 adding 'camoco/cli/commands/health.py' 2021-07-14T07:25:43,750 adding 'camoco/cli/commands/list.py' 2021-07-14T07:25:43,751 adding 'camoco/cli/commands/locality.py' 2021-07-14T07:25:43,753 adding 'camoco/cli/commands/plotGWAS.py' 2021-07-14T07:25:43,754 adding 'camoco/cli/commands/remove.py' 2021-07-14T07:25:43,756 adding 'camoco/cli/commands/simulateGWAS.py' 2021-07-14T07:25:43,757 adding 'camoco/cli/commands/snp2gene.py' 2021-07-14T07:25:43,763 adding 'camoco-0.6.2.data/scripts/camoco' 2021-07-14T07:25:43,765 adding 'camoco-0.6.2.dist-info/METADATA' 2021-07-14T07:25:43,766 adding 'camoco-0.6.2.dist-info/WHEEL' 2021-07-14T07:25:43,767 adding 'camoco-0.6.2.dist-info/top_level.txt' 2021-07-14T07:25:43,768 adding 'camoco-0.6.2.dist-info/RECORD' 2021-07-14T07:25:43,787 removing build/bdist.linux-armv7l/wheel 2021-07-14T07:25:44,121 Building wheel for camoco (setup.py): finished with status 'done' 2021-07-14T07:25:44,134 Created wheel for camoco: filename=camoco-0.6.2-cp39-cp39-linux_armv7l.whl size=777443 sha256=ff1d8441751a2549de7aa0d0368f745f8c63fba7d2d7366dd4e73b665253d8f3 2021-07-14T07:25:44,135 Stored in directory: /tmp/pip-ephem-wheel-cache-mmr2eycp/wheels/45/03/cf/998fd78b47396d39fa45e42bf99d70a101f4704159b2b75433 2021-07-14T07:25:44,148 Successfully built camoco 2021-07-14T07:25:44,177 Removed build tracker: '/tmp/pip-req-tracker-ufqzcwak'