2021-07-14T07:30:22,774 Created temporary directory: /tmp/pip-ephem-wheel-cache-bghn4rbx
2021-07-14T07:30:22,777 Created temporary directory: /tmp/pip-req-tracker-i8c0c62k
2021-07-14T07:30:22,777 Initialized build tracking at /tmp/pip-req-tracker-i8c0c62k
2021-07-14T07:30:22,777 Created build tracker: /tmp/pip-req-tracker-i8c0c62k
2021-07-14T07:30:22,778 Entered build tracker: /tmp/pip-req-tracker-i8c0c62k
2021-07-14T07:30:22,778 Created temporary directory: /tmp/pip-wheel-6fg73bek
2021-07-14T07:30:22,809 1 location(s) to search for versions of teca:
2021-07-14T07:30:22,809 * https://pypi.org/simple/teca/
2021-07-14T07:30:22,810 Fetching project page and analyzing links: https://pypi.org/simple/teca/
2021-07-14T07:30:22,810 Getting page https://pypi.org/simple/teca/
2021-07-14T07:30:22,813 Found index url https://pypi.org/simple
2021-07-14T07:30:22,987   Found link https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 (from https://pypi.org/simple/teca/), version: 2.2.1
2021-07-14T07:30:22,987   Found link https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e (from https://pypi.org/simple/teca/), version: 2.2.2
2021-07-14T07:30:22,988   Found link https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b (from https://pypi.org/simple/teca/), version: 3.0.0
2021-07-14T07:30:22,988   Found link https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 (from https://pypi.org/simple/teca/), version: 4.0.0
2021-07-14T07:30:22,988   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/70/4b/3ecb17552872c808d9b3f16d428780dae6a6fbb1c3dfdf1fa7af11141f2c/teca-4.1.0-py3.9-linux-x86_64.egg#sha256=3cf2bc49c8b6feea1450fb17e9c9a4f23cce8cdcf16d12148c9e9ee753c12725 (from https://pypi.org/simple/teca/)
2021-07-14T07:30:22,989   Found link https://files.pythonhosted.org/packages/5f/83/21a8fdb68f6211299f8154270d1e8dbac541f1fde15c15dde0c7cb46e143/teca-4.1.0.tar.gz#sha256=170d8f9f8a38e196597c37c67882e85fdf19e53729cd3bbf27be65ac9d3132e8 (from https://pypi.org/simple/teca/), version: 4.1.0
2021-07-14T07:30:22,989 Skipping link: not a file: https://pypi.org/simple/teca/
2021-07-14T07:30:23,010 Given no hashes to check 1 links for project 'teca': discarding no candidates
2021-07-14T07:30:23,036 Collecting teca==2.2.1
2021-07-14T07:30:23,037   Created temporary directory: /tmp/pip-unpack-7jeewr5k
2021-07-14T07:30:24,714   Downloading teca-2.2.1.tar.gz (22.6 MB)
2021-07-14T07:30:28,637   Added teca==2.2.1 from https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 to build tracker '/tmp/pip-req-tracker-i8c0c62k'
2021-07-14T07:30:28,638     Running setup.py (path:/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py) egg_info for package teca
2021-07-14T07:30:28,639     Created temporary directory: /tmp/pip-pip-egg-info-cs77ziqq
2021-07-14T07:30:28,639     Running command python setup.py egg_info
2021-07-14T07:30:30,457     running egg_info
2021-07-14T07:30:30,460     creating /tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info
2021-07-14T07:30:30,462     writing /tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/PKG-INFO
2021-07-14T07:30:30,465     writing dependency_links to /tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/dependency_links.txt
2021-07-14T07:30:30,468     writing requirements to /tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/requires.txt
2021-07-14T07:30:30,469     writing top-level names to /tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/top_level.txt
2021-07-14T07:30:30,471     writing manifest file '/tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/SOURCES.txt'
2021-07-14T07:30:30,515     reading manifest file '/tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/SOURCES.txt'
2021-07-14T07:30:30,518     reading manifest template 'MANIFEST.in'
2021-07-14T07:30:30,715     warning: no previously-included files matching '*.pdf' found anywhere in distribution
2021-07-14T07:30:30,718     warning: no previously-included files matching '*.sw?' found anywhere in distribution
2021-07-14T07:30:30,719     adding license file 'LICENSE.md'
2021-07-14T07:30:30,735     writing manifest file '/tmp/pip-pip-egg-info-cs77ziqq/teca.egg-info/SOURCES.txt'
2021-07-14T07:30:30,826   Source in /tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36 has version 2.2.1, which satisfies requirement teca==2.2.1 from https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785
2021-07-14T07:30:30,827   Removed teca==2.2.1 from https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 from build tracker '/tmp/pip-req-tracker-i8c0c62k'
2021-07-14T07:30:30,831 Created temporary directory: /tmp/pip-unpack-izxwg1un
2021-07-14T07:30:30,832 Building wheels for collected packages: teca
2021-07-14T07:30:30,836   Created temporary directory: /tmp/pip-wheel-2pu6crse
2021-07-14T07:30:30,836   Building wheel for teca (setup.py): started
2021-07-14T07:30:30,837   Destination directory: /tmp/pip-wheel-2pu6crse
2021-07-14T07:30:30,837   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-2pu6crse
2021-07-14T07:30:32,666   running bdist_wheel
2021-07-14T07:30:32,673   running build
2021-07-14T07:30:32,673   running build_ext
2021-07-14T07:30:33,681   -- The C compiler identification is GNU 10.2.1
2021-07-14T07:30:34,133   -- The CXX compiler identification is GNU 10.2.1
2021-07-14T07:30:35,084   -- The Fortran compiler identification is GNU 10.2.1
2021-07-14T07:30:35,240   -- Detecting C compiler ABI info
2021-07-14T07:30:35,766   -- Detecting C compiler ABI info - done
2021-07-14T07:30:35,838   -- Check for working C compiler: /usr/bin/cc - skipped
2021-07-14T07:30:35,840   -- Detecting C compile features
2021-07-14T07:30:35,846   -- Detecting C compile features - done
2021-07-14T07:30:35,878   -- Detecting CXX compiler ABI info
2021-07-14T07:30:36,385   -- Detecting CXX compiler ABI info - done
2021-07-14T07:30:36,452   -- Check for working CXX compiler: /usr/bin/c++ - skipped
2021-07-14T07:30:36,454   -- Detecting CXX compile features
2021-07-14T07:30:36,457   -- Detecting CXX compile features - done
2021-07-14T07:30:36,487   -- Detecting Fortran compiler ABI info
2021-07-14T07:30:37,059   -- Detecting Fortran compiler ABI info - done
2021-07-14T07:30:37,135   -- Check for working Fortran compiler: /usr/bin/gfortran - skipped
2021-07-14T07:30:37,135   -- Checking whether /usr/bin/gfortran supports Fortran 90
2021-07-14T07:30:37,733   -- Checking whether /usr/bin/gfortran supports Fortran 90 - yes
2021-07-14T07:30:37,744   -- Configuring a Release build
2021-07-14T07:30:37,744   -- Check for c++ regex support
2021-07-14T07:30:47,517   -- Check for c++ regex support -- enabled
2021-07-14T07:30:48,957   -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1")
2021-07-14T07:30:53,652   -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1")
2021-07-14T07:30:59,498   -- Found MPI_Fortran: /usr/lib/arm-linux-gnueabihf/libmpi_usempif08.so (found version "3.1")
2021-07-14T07:30:59,501   -- Found MPI: TRUE (found version "3.1")
2021-07-14T07:30:59,504   -- MPI features -- enabled
2021-07-14T07:30:59,537   -- Could NOT find NetCDF (missing: NETCDF_LIBRARIES NETCDF_INCLUDE_DIRS)
2021-07-14T07:30:59,537   CMake Error at CMakeLists.txt:112 (message):
2021-07-14T07:30:59,537     NetCDF features -- required but not found.  set NETCDF_DIR to enable.


2021-07-14T07:30:59,540   -- Configuring incomplete, errors occurred!
2021-07-14T07:30:59,540   See also "/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/build/temp.linux-armv7l-3.9/CMakeFiles/CMakeOutput.log".

2021-07-14T07:30:59,557   ================================================================
2021-07-14T07:30:59,558     An error ocured building TECA. This is usually a symptom
2021-07-14T07:30:59,558     of a missing dependency. The error messages above will indicate
2021-07-14T07:30:59,558     which package is missing. Install the development package for
2021-07-14T07:30:59,558     the missing dependency using your system's package manager
2021-07-14T07:30:59,559   ================================================================

2021-07-14T07:30:59,559   Traceback (most recent call last):
2021-07-14T07:30:59,560     File "<string>", line 1, in <module>
2021-07-14T07:30:59,560     File "/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py", line 97, in <module>
2021-07-14T07:30:59,560       setup(name='teca',
2021-07-14T07:30:59,560     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-07-14T07:30:59,561       return distutils.core.setup(**attrs)
2021-07-14T07:30:59,561     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-07-14T07:30:59,561       dist.run_commands()
2021-07-14T07:30:59,561     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-07-14T07:30:59,562       self.run_command(cmd)
2021-07-14T07:30:59,563     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-14T07:30:59,564       cmd_obj.run()
2021-07-14T07:30:59,564     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-07-14T07:30:59,564       self.run_command('build')
2021-07-14T07:30:59,565     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-14T07:30:59,565       self.distribution.run_command(command)
2021-07-14T07:30:59,566     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-14T07:30:59,567       cmd_obj.run()
2021-07-14T07:30:59,567     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-07-14T07:30:59,567       self.run_command(cmd_name)
2021-07-14T07:30:59,568     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-14T07:30:59,568       self.distribution.run_command(command)
2021-07-14T07:30:59,569     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-14T07:30:59,570       cmd_obj.run()
2021-07-14T07:30:59,570     File "/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py", line 34, in run
2021-07-14T07:30:59,570       self.build_extension(ext)
2021-07-14T07:30:59,571     File "/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py", line 72, in build_extension
2021-07-14T07:30:59,571       subprocess.check_call(['cmake', ext.sourcedir] + cmake_args, cwd=self.build_temp)
2021-07-14T07:30:59,571     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-07-14T07:30:59,572       raise CalledProcessError(retcode, cmd)
2021-07-14T07:30:59,572   subprocess.CalledProcessError: Command '['cmake', '/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36', '-DCMAKE_INSTALL_PREFIX=/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/build/lib.linux-armv7l-3.9', '-DLIB_PREFIX=.', '-DREQUIRE_PYTHON=TRUE', '-DREQUIRE_MPI=TRUE', '-DREQUIRE_UDUNITS=TRUE', '-DREQUIRE_NETCDF=TRUE', '-DREQUIRE_BOOST=TRUE', '-DTECA_PYTHON_VERSION=3', '-DTECA_VERSION=2.2.1(PyPi)', '-DCMAKE_BUILD_TYPE=Release']' returned non-zero exit status 1.
2021-07-14T07:30:59,662   Building wheel for teca (setup.py): finished with status 'error'
2021-07-14T07:30:59,662   ERROR: Failed building wheel for teca
2021-07-14T07:30:59,663   Running setup.py clean for teca
2021-07-14T07:30:59,663   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-6fg73bek/teca_3029ddadd18f4362af62fa26f272db36/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-14T07:31:01,155   running clean
2021-07-14T07:31:01,158   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-14T07:31:01,231   'build/lib.linux-armv7l-3.9' does not exist -- can't clean it
2021-07-14T07:31:01,232   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-14T07:31:01,232   'build/scripts-3.9' does not exist -- can't clean it
2021-07-14T07:31:01,233   removing 'build'
2021-07-14T07:31:01,311 Failed to build teca
2021-07-14T07:31:01,312 ERROR: Failed to build one or more wheels
2021-07-14T07:31:01,313 Exception information:
2021-07-14T07:31:01,313 Traceback (most recent call last):
2021-07-14T07:31:01,313   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-14T07:31:01,313     status = self.run(options, args)
2021-07-14T07:31:01,313   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-14T07:31:01,313     return func(self, options, args)
2021-07-14T07:31:01,313   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-14T07:31:01,313     raise CommandError(
2021-07-14T07:31:01,313 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-14T07:31:01,316 Removed build tracker: '/tmp/pip-req-tracker-i8c0c62k'