2021-07-14T07:35:34,549 Created temporary directory: /tmp/pip-ephem-wheel-cache-ibow1zh0 2021-07-14T07:35:34,552 Created temporary directory: /tmp/pip-req-tracker-6oij0x9g 2021-07-14T07:35:34,553 Initialized build tracking at /tmp/pip-req-tracker-6oij0x9g 2021-07-14T07:35:34,553 Created build tracker: /tmp/pip-req-tracker-6oij0x9g 2021-07-14T07:35:34,553 Entered build tracker: /tmp/pip-req-tracker-6oij0x9g 2021-07-14T07:35:34,554 Created temporary directory: /tmp/pip-wheel-9mp5__9q 2021-07-14T07:35:34,586 1 location(s) to search for versions of probabilistic2020: 2021-07-14T07:35:34,586 * https://pypi.org/simple/probabilistic2020/ 2021-07-14T07:35:34,587 Fetching project page and analyzing links: https://pypi.org/simple/probabilistic2020/ 2021-07-14T07:35:34,588 Getting page https://pypi.org/simple/probabilistic2020/ 2021-07-14T07:35:34,590 Found index url https://pypi.org/simple 2021-07-14T07:35:34,781 Found link 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https://files.pythonhosted.org/packages/dc/60/e3cb0c222d9f2a4fba7cfe9aa180095e689eda05ff5315201176c0f0813e/probabilistic2020-1.0.3.post1.tar.gz#sha256=42487a6e36a4b32a36b7ecfe3bdfb1d347211cc93e7652faf7480dd55713d33c (from https://pypi.org/simple/probabilistic2020/), version: 1.0.3.post1 2021-07-14T07:35:34,783 Found link https://files.pythonhosted.org/packages/b3/8b/d9a2de8ccb78f50bb9c2107a39b645472e156ef2b53bf7edea89ed243b4c/probabilistic2020-1.0.4.tar.gz#sha256=be3d5d06f97274543ee68dc0a1c79eab86d2c2ea9825b03cf6716f775a7cfad1 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.4 2021-07-14T07:35:34,784 Found link https://files.pythonhosted.org/packages/b8/50/de8d0ec282eb853467b5d01df38bc34b654a55349bfeca92744b1af51659/probabilistic2020-1.0.5.tar.gz#sha256=0dffe64edab37eff89e9f5c00ba858964d9cb765c096983b28950fe820c6a24d (from https://pypi.org/simple/probabilistic2020/), version: 1.0.5 2021-07-14T07:35:34,784 Found link https://files.pythonhosted.org/packages/42/3c/41a788891b605cbace92168f2e2048cc30f89e9ae74c8fb79eb58227987a/probabilistic2020-1.0.6.tar.gz#sha256=daa8401db708d6d892d2186752d3554a83fc2d822719d05f4eb772fa1d32f795 (from https://pypi.org/simple/probabilistic2020/), version: 1.0.6 2021-07-14T07:35:34,784 Found link https://files.pythonhosted.org/packages/ba/85/aeb7d2b0a42d2572bef16ec4b54ab19025b14939f5d266319b88c9253f5a/probabilistic2020-1.0.7.tar.gz#sha256=f8985ba2bfc144156b4f30747d4648e9127e8b8983ba55baa94d6d5314a1218b (from https://pypi.org/simple/probabilistic2020/), version: 1.0.7 2021-07-14T07:35:34,785 Found link https://files.pythonhosted.org/packages/41/d7/a142a18c9676a20c5f309c027c39779f1e312f44af98a04c301d9862c6fb/probabilistic2020-1.1.0.tar.gz#sha256=240d10a6b6b906e479023c7c9ec0b203d3f885abc074fad23b66c2c1b299d8d2 (from https://pypi.org/simple/probabilistic2020/), version: 1.1.0 2021-07-14T07:35:34,785 Found link https://files.pythonhosted.org/packages/96/5b/4a1b571cdf716507dc83b4b763df3b09a5def7562814d7aef8364ca5d270/probabilistic2020-1.1.1.tar.gz#sha256=befec6379d283e5e3b1c607941540f3a4f7e46c671706181e13783f6973abbc0 (from https://pypi.org/simple/probabilistic2020/), version: 1.1.1 2021-07-14T07:35:34,786 Found link https://files.pythonhosted.org/packages/30/ff/feae37090012be833521cf374700b1609d102fd3dfa8b5690ee657c9708f/probabilistic2020-1.2.0.tar.gz#sha256=12e0f9dc3fc47ed2b6edf2d4c9106c20ab442c6282b1b1d51c0146e61362bd49 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.0 2021-07-14T07:35:34,786 Found link https://files.pythonhosted.org/packages/ab/e3/41b006a57ddc39d0d598212f83eb4a31319839b0b2d1551c1747d9da83a2/probabilistic2020-1.2.1.tar.gz#sha256=65e32e4aa5d0f7b93bf0aa649c35524a9503906731c05dc55b179a1ba29ffa30 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.1 2021-07-14T07:35:34,786 Found link https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz#sha256=f1b250e12c06bc425b4c3819f9cc31d93f27e5a788ce9792ed5eb2c0d92c7bc2 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.2 2021-07-14T07:35:34,787 Found link https://files.pythonhosted.org/packages/d7/58/32b490f92ab7a44a8ea617134ca5666a53e167634fa7c82d445a861577d1/probabilistic2020-1.2.3.tar.gz#sha256=6b907c9255e6fa4717cd1c03622f51513199ed477cc27fa06a59da2f852fff05 (from https://pypi.org/simple/probabilistic2020/), version: 1.2.3 2021-07-14T07:35:34,787 Skipping link: not a file: https://pypi.org/simple/probabilistic2020/ 2021-07-14T07:35:34,809 Given no hashes to check 1 links for project 'probabilistic2020': discarding no candidates 2021-07-14T07:35:34,834 Collecting probabilistic2020==1.2.1 2021-07-14T07:35:34,836 Created temporary directory: /tmp/pip-unpack-p9uwkx98 2021-07-14T07:35:35,079 Downloading probabilistic2020-1.2.1.tar.gz (375 kB) 2021-07-14T07:35:35,354 Added probabilistic2020==1.2.1 from https://files.pythonhosted.org/packages/ab/e3/41b006a57ddc39d0d598212f83eb4a31319839b0b2d1551c1747d9da83a2/probabilistic2020-1.2.1.tar.gz#sha256=65e32e4aa5d0f7b93bf0aa649c35524a9503906731c05dc55b179a1ba29ffa30 to build tracker '/tmp/pip-req-tracker-6oij0x9g' 2021-07-14T07:35:35,356 Running setup.py (path:/tmp/pip-wheel-9mp5__9q/probabilistic2020_7d96e8da7480407f84c377bd8e5c535c/setup.py) egg_info for package probabilistic2020 2021-07-14T07:35:35,356 Created temporary directory: /tmp/pip-pip-egg-info-6yrebsct 2021-07-14T07:35:35,357 Running command python setup.py egg_info 2021-07-14T07:35:37,050 running egg_info 2021-07-14T07:35:37,053 creating /tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info 2021-07-14T07:35:37,055 writing /tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/PKG-INFO 2021-07-14T07:35:37,058 writing dependency_links to /tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/dependency_links.txt 2021-07-14T07:35:37,060 writing entry points to /tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/entry_points.txt 2021-07-14T07:35:37,062 writing requirements to /tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/requires.txt 2021-07-14T07:35:37,063 writing top-level names to /tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/top_level.txt 2021-07-14T07:35:37,065 writing manifest file '/tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/SOURCES.txt' 2021-07-14T07:35:37,520 reading manifest file '/tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/SOURCES.txt' 2021-07-14T07:35:37,523 reading manifest template 'MANIFEST.in' 2021-07-14T07:35:37,526 warning: no files found matching 'prob2020/console/frameshift_lrt.R' 2021-07-14T07:35:37,531 writing manifest file '/tmp/pip-pip-egg-info-6yrebsct/probabilistic2020.egg-info/SOURCES.txt' 2021-07-14T07:35:37,668 Source in /tmp/pip-wheel-9mp5__9q/probabilistic2020_7d96e8da7480407f84c377bd8e5c535c has version 1.2.1, which satisfies requirement probabilistic2020==1.2.1 from https://files.pythonhosted.org/packages/ab/e3/41b006a57ddc39d0d598212f83eb4a31319839b0b2d1551c1747d9da83a2/probabilistic2020-1.2.1.tar.gz#sha256=65e32e4aa5d0f7b93bf0aa649c35524a9503906731c05dc55b179a1ba29ffa30 2021-07-14T07:35:37,669 Removed probabilistic2020==1.2.1 from https://files.pythonhosted.org/packages/ab/e3/41b006a57ddc39d0d598212f83eb4a31319839b0b2d1551c1747d9da83a2/probabilistic2020-1.2.1.tar.gz#sha256=65e32e4aa5d0f7b93bf0aa649c35524a9503906731c05dc55b179a1ba29ffa30 from build tracker '/tmp/pip-req-tracker-6oij0x9g' 2021-07-14T07:35:37,674 Created temporary directory: /tmp/pip-unpack-7vrn6kw0 2021-07-14T07:35:37,674 Building wheels for collected packages: probabilistic2020 2021-07-14T07:35:37,678 Created temporary directory: /tmp/pip-wheel-f3h2krwg 2021-07-14T07:35:37,679 Building wheel for probabilistic2020 (setup.py): started 2021-07-14T07:35:37,679 Destination directory: /tmp/pip-wheel-f3h2krwg 2021-07-14T07:35:37,680 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9mp5__9q/probabilistic2020_7d96e8da7480407f84c377bd8e5c535c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9mp5__9q/probabilistic2020_7d96e8da7480407f84c377bd8e5c535c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-f3h2krwg 2021-07-14T07:35:39,308 running bdist_wheel 2021-07-14T07:35:39,546 running build 2021-07-14T07:35:39,546 running build_py 2021-07-14T07:35:39,688 creating build 2021-07-14T07:35:39,688 creating build/lib.linux-armv7l-3.9 2021-07-14T07:35:39,689 creating build/lib.linux-armv7l-3.9/prob2020 2021-07-14T07:35:39,690 copying prob2020/__init__.py -> build/lib.linux-armv7l-3.9/prob2020 2021-07-14T07:35:39,693 creating build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,694 copying prob2020/python/scores.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,697 copying prob2020/python/sequence_context.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,699 copying prob2020/python/indel.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,701 copying prob2020/python/__init__.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,703 copying prob2020/python/bed_line.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,705 copying prob2020/python/permutation.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,708 copying prob2020/python/count_frameshifts.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,711 copying prob2020/python/utils.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,714 copying prob2020/python/process_result.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,717 copying prob2020/python/gene_sequence.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,720 copying prob2020/python/mymath.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,722 copying prob2020/python/amino_acid.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,725 copying prob2020/python/mutation_context.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,728 copying prob2020/python/p_value.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,731 copying prob2020/python/annotate.py -> build/lib.linux-armv7l-3.9/prob2020/python 2021-07-14T07:35:39,735 creating build/lib.linux-armv7l-3.9/prob2020/cython 2021-07-14T07:35:39,736 copying prob2020/cython/__init__.py -> build/lib.linux-armv7l-3.9/prob2020/cython 2021-07-14T07:35:39,738 creating build/lib.linux-armv7l-3.9/prob2020/cpp 2021-07-14T07:35:39,739 copying prob2020/cpp/__init__.py -> build/lib.linux-armv7l-3.9/prob2020/cpp 2021-07-14T07:35:39,743 creating build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,744 copying prob2020/console/__init__.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,746 copying prob2020/console/extract_gene_seq.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,748 copying prob2020/console/probabilistic2020.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,751 copying prob2020/console/randomization_test.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,754 copying prob2020/console/count_frameshifts.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,757 copying prob2020/console/simulate_non_silent_ratio.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,760 copying prob2020/console/annotate.py -> build/lib.linux-armv7l-3.9/prob2020/console 2021-07-14T07:35:39,769 running build_ext 2021-07-14T07:35:39,776 building 'prob2020.cython.uniform_kde' extension 2021-07-14T07:35:39,777 creating build/temp.linux-armv7l-3.9 2021-07-14T07:35:39,777 creating build/temp.linux-armv7l-3.9/prob2020 2021-07-14T07:35:39,778 creating build/temp.linux-armv7l-3.9/prob2020/cython 2021-07-14T07:35:39,779 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iprob2020/cython/ -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c prob2020/cython/uniform_kde.cpp -o build/temp.linux-armv7l-3.9/prob2020/cython/uniform_kde.o 2021-07-14T07:35:40,403 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-14T07:35:40,403 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-14T07:35:40,403 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-14T07:35:40,403 from prob2020/cython/uniform_kde.cpp:303: 2021-07-14T07:35:40,403 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-14T07:35:40,404 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-14T07:35:40,404 | ^~~~~~~ 2021-07-14T07:35:42,478 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-14T07:35:42,479 from /usr/include/python3.9/Python.h:97, 2021-07-14T07:35:42,479 from prob2020/cython/uniform_kde.cpp:16: 2021-07-14T07:35:42,479 prob2020/cython/uniform_kde.cpp: In function ‘int __Pyx_ParseOptionalKeywords(PyObject*, PyObject***, PyObject*, PyObject**, Py_ssize_t, const char*)’: 2021-07-14T07:35:42,479 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,480 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,480 | ^ 2021-07-14T07:35:42,480 /usr/include/python3.9/cpython/unicodeobject.h:261:7: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,480 261 | PyUnicode_WSTR_LENGTH(op) : \ 2021-07-14T07:35:42,480 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,481 prob2020/cython/uniform_kde.cpp:18124:22: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,481 18124 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,481 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,481 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,482 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,482 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,482 /usr/include/python3.9/cpython/unicodeobject.h:262:52: warning: ‘Py_UNICODE* PyUnicode_AsUnicode(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,482 262 | ((void)PyUnicode_AsUnicode(_PyObject_CAST(op)),\ 2021-07-14T07:35:42,482 | ^ 2021-07-14T07:35:42,483 prob2020/cython/uniform_kde.cpp:18124:22: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,483 18124 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,483 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,483 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-14T07:35:42,483 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-14T07:35:42,484 | ^~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,484 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,484 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,484 | ^ 2021-07-14T07:35:42,484 /usr/include/python3.9/cpython/unicodeobject.h:264:8: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,485 264 | PyUnicode_WSTR_LENGTH(op))) 2021-07-14T07:35:42,485 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,485 prob2020/cython/uniform_kde.cpp:18124:22: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,485 18124 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,486 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,486 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,486 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,486 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,486 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,487 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,487 | ^ 2021-07-14T07:35:42,487 /usr/include/python3.9/cpython/unicodeobject.h:261:7: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,487 261 | PyUnicode_WSTR_LENGTH(op) : \ 2021-07-14T07:35:42,487 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,488 prob2020/cython/uniform_kde.cpp:18124:52: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,488 18124 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,488 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,488 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,488 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,489 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,489 /usr/include/python3.9/cpython/unicodeobject.h:262:52: warning: ‘Py_UNICODE* PyUnicode_AsUnicode(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,489 262 | ((void)PyUnicode_AsUnicode(_PyObject_CAST(op)),\ 2021-07-14T07:35:42,489 | ^ 2021-07-14T07:35:42,489 prob2020/cython/uniform_kde.cpp:18124:52: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,490 18124 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,490 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,490 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-14T07:35:42,490 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-14T07:35:42,490 | ^~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,491 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,491 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,491 | ^ 2021-07-14T07:35:42,491 /usr/include/python3.9/cpython/unicodeobject.h:264:8: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,492 264 | PyUnicode_WSTR_LENGTH(op))) 2021-07-14T07:35:42,492 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,492 prob2020/cython/uniform_kde.cpp:18124:52: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,492 18124 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,492 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,493 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,493 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,493 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,493 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,493 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,494 | ^ 2021-07-14T07:35:42,494 /usr/include/python3.9/cpython/unicodeobject.h:261:7: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,494 261 | PyUnicode_WSTR_LENGTH(op) : \ 2021-07-14T07:35:42,494 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,494 prob2020/cython/uniform_kde.cpp:18140:26: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,495 18140 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,495 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,495 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,495 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,495 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,496 /usr/include/python3.9/cpython/unicodeobject.h:262:52: warning: ‘Py_UNICODE* PyUnicode_AsUnicode(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,496 262 | ((void)PyUnicode_AsUnicode(_PyObject_CAST(op)),\ 2021-07-14T07:35:42,496 | ^ 2021-07-14T07:35:42,496 prob2020/cython/uniform_kde.cpp:18140:26: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,496 18140 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,497 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,497 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-14T07:35:42,497 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-14T07:35:42,497 | ^~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,498 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,498 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,498 | ^ 2021-07-14T07:35:42,498 /usr/include/python3.9/cpython/unicodeobject.h:264:8: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,499 264 | PyUnicode_WSTR_LENGTH(op))) 2021-07-14T07:35:42,499 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,499 prob2020/cython/uniform_kde.cpp:18140:26: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,499 18140 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,499 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,500 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,500 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,500 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,500 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,500 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,501 | ^ 2021-07-14T07:35:42,501 /usr/include/python3.9/cpython/unicodeobject.h:261:7: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,501 261 | PyUnicode_WSTR_LENGTH(op) : \ 2021-07-14T07:35:42,501 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,501 prob2020/cython/uniform_kde.cpp:18140:59: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,502 18140 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,502 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,502 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,502 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,502 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,503 /usr/include/python3.9/cpython/unicodeobject.h:262:52: warning: ‘Py_UNICODE* PyUnicode_AsUnicode(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,503 262 | ((void)PyUnicode_AsUnicode(_PyObject_CAST(op)),\ 2021-07-14T07:35:42,503 | ^ 2021-07-14T07:35:42,503 prob2020/cython/uniform_kde.cpp:18140:59: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,503 18140 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,504 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,504 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-14T07:35:42,504 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-14T07:35:42,504 | ^~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,504 /usr/include/python3.9/cpython/unicodeobject.h:451:75: warning: ‘Py_ssize_t _PyUnicode_get_wstr_length(PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,505 451 | #define PyUnicode_WSTR_LENGTH(op) _PyUnicode_get_wstr_length((PyObject*)op) 2021-07-14T07:35:42,505 | ^ 2021-07-14T07:35:42,505 /usr/include/python3.9/cpython/unicodeobject.h:264:8: note: in expansion of macro ‘PyUnicode_WSTR_LENGTH’ 2021-07-14T07:35:42,505 264 | PyUnicode_WSTR_LENGTH(op))) 2021-07-14T07:35:42,505 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,506 prob2020/cython/uniform_kde.cpp:18140:59: note: in expansion of macro ‘PyUnicode_GET_SIZE’ 2021-07-14T07:35:42,506 18140 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-14T07:35:42,506 | ^~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,506 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-14T07:35:42,506 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-14T07:35:42,507 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,533 In file included from /usr/include/python3.9/Python.h:145, 2021-07-14T07:35:42,533 from prob2020/cython/uniform_kde.cpp:16: 2021-07-14T07:35:42,533 prob2020/cython/uniform_kde.cpp: In function ‘void __Pyx_Raise(PyObject*, PyObject*, PyObject*, PyObject*)’: 2021-07-14T07:35:42,534 /usr/include/python3.9/ceval.h:24:66: warning: ‘PyObject* PyEval_CallObjectWithKeywords(PyObject*, PyObject*, PyObject*)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,534 24 | PyEval_CallObjectWithKeywords(callable, arg, (PyObject *)NULL) 2021-07-14T07:35:42,534 | ^ 2021-07-14T07:35:42,534 prob2020/cython/uniform_kde.cpp:19157:26: note: in expansion of macro ‘PyEval_CallObject’ 2021-07-14T07:35:42,535 19157 | owned_instance = PyEval_CallObject(type, args); 2021-07-14T07:35:42,535 | ^~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,535 /usr/include/python3.9/ceval.h:17:43: note: declared here 2021-07-14T07:35:42,535 17 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( 2021-07-14T07:35:42,535 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,547 prob2020/cython/uniform_kde.cpp: In function ‘PyObject* __Pyx_decode_c_string(const char*, Py_ssize_t, Py_ssize_t, const char*, const char*, PyObject* (*)(const char*, Py_ssize_t, const char*))’: 2021-07-14T07:35:42,548 prob2020/cython/uniform_kde.cpp:19389:45: warning: ‘PyObject* PyUnicode_FromUnicode(const Py_UNICODE*, Py_ssize_t)’ is deprecated [-Wdeprecated-declarations] 2021-07-14T07:35:42,548 19389 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-14T07:35:42,548 | ^ 2021-07-14T07:35:42,548 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-14T07:35:42,549 from /usr/include/python3.9/Python.h:97, 2021-07-14T07:35:42,549 from prob2020/cython/uniform_kde.cpp:16: 2021-07-14T07:35:42,549 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-14T07:35:42,549 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-14T07:35:42,549 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-14T07:35:42,550 prob2020/cython/uniform_kde.cpp: In function ‘int __Pyx_GetException(PyObject**, PyObject**, PyObject**)’: 2021-07-14T07:35:42,550 prob2020/cython/uniform_kde.cpp:19430:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-14T07:35:42,550 19430 | tmp_type = tstate->exc_type; 2021-07-14T07:35:42,550 | ^~~~~~~~ 2021-07-14T07:35:42,550 | curexc_type 2021-07-14T07:35:42,551 prob2020/cython/uniform_kde.cpp:19431:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-14T07:35:42,551 19431 | tmp_value = tstate->exc_value; 2021-07-14T07:35:42,551 | ^~~~~~~~~ 2021-07-14T07:35:42,551 | curexc_value 2021-07-14T07:35:42,551 prob2020/cython/uniform_kde.cpp:19432:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-14T07:35:42,552 19432 | tmp_tb = tstate->exc_traceback; 2021-07-14T07:35:42,552 | ^~~~~~~~~~~~~ 2021-07-14T07:35:42,552 | curexc_traceback 2021-07-14T07:35:42,552 prob2020/cython/uniform_kde.cpp:19433:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-14T07:35:42,553 19433 | tstate->exc_type = local_type; 2021-07-14T07:35:42,553 | ^~~~~~~~ 2021-07-14T07:35:42,553 | curexc_type 2021-07-14T07:35:42,553 prob2020/cython/uniform_kde.cpp:19434:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-14T07:35:42,553 19434 | tstate->exc_value = local_value; 2021-07-14T07:35:42,554 | ^~~~~~~~~ 2021-07-14T07:35:42,554 | curexc_value 2021-07-14T07:35:42,554 prob2020/cython/uniform_kde.cpp:19435:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-14T07:35:42,554 19435 | tstate->exc_traceback = local_tb; 2021-07-14T07:35:42,555 | ^~~~~~~~~~~~~ 2021-07-14T07:35:42,555 | curexc_traceback 2021-07-14T07:35:42,560 prob2020/cython/uniform_kde.cpp: In function ‘void __Pyx_ExceptionSave(PyObject**, PyObject**, PyObject**)’: 2021-07-14T07:35:42,560 prob2020/cython/uniform_kde.cpp:19557:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-14T07:35:42,561 19557 | *type = tstate->exc_type; 2021-07-14T07:35:42,561 | ^~~~~~~~ 2021-07-14T07:35:42,561 | curexc_type 2021-07-14T07:35:42,561 prob2020/cython/uniform_kde.cpp:19558:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-14T07:35:42,562 19558 | *value = tstate->exc_value; 2021-07-14T07:35:42,562 | ^~~~~~~~~ 2021-07-14T07:35:42,562 | curexc_value 2021-07-14T07:35:42,562 prob2020/cython/uniform_kde.cpp:19559:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-14T07:35:42,562 19559 | *tb = tstate->exc_traceback; 2021-07-14T07:35:42,563 | ^~~~~~~~~~~~~ 2021-07-14T07:35:42,563 | curexc_traceback 2021-07-14T07:35:42,563 prob2020/cython/uniform_kde.cpp: In function ‘void __Pyx_ExceptionReset(PyObject*, PyObject*, PyObject*)’: 2021-07-14T07:35:42,563 prob2020/cython/uniform_kde.cpp:19571:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-14T07:35:42,563 19571 | tmp_type = tstate->exc_type; 2021-07-14T07:35:42,564 | ^~~~~~~~ 2021-07-14T07:35:42,564 | curexc_type 2021-07-14T07:35:42,564 prob2020/cython/uniform_kde.cpp:19572:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-14T07:35:42,564 19572 | tmp_value = tstate->exc_value; 2021-07-14T07:35:42,564 | ^~~~~~~~~ 2021-07-14T07:35:42,565 | curexc_value 2021-07-14T07:35:42,565 prob2020/cython/uniform_kde.cpp:19573:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-14T07:35:42,565 19573 | tmp_tb = tstate->exc_traceback; 2021-07-14T07:35:42,565 | ^~~~~~~~~~~~~ 2021-07-14T07:35:42,565 | curexc_traceback 2021-07-14T07:35:42,566 prob2020/cython/uniform_kde.cpp:19574:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2021-07-14T07:35:42,566 19574 | tstate->exc_type = type; 2021-07-14T07:35:42,566 | ^~~~~~~~ 2021-07-14T07:35:42,566 | curexc_type 2021-07-14T07:35:42,566 prob2020/cython/uniform_kde.cpp:19575:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2021-07-14T07:35:42,567 19575 | tstate->exc_value = value; 2021-07-14T07:35:42,567 | ^~~~~~~~~ 2021-07-14T07:35:42,567 | curexc_value 2021-07-14T07:35:42,567 prob2020/cython/uniform_kde.cpp:19576:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2021-07-14T07:35:42,567 19576 | tstate->exc_traceback = tb; 2021-07-14T07:35:42,568 | ^~~~~~~~~~~~~ 2021-07-14T07:35:42,568 | curexc_traceback 2021-07-14T07:35:42,939 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, 2021-07-14T07:35:42,940 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-14T07:35:42,940 from prob2020/cython/uniform_kde.cpp:303: 2021-07-14T07:35:42,940 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope: 2021-07-14T07:35:42,940 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1464:1: warning: ‘int _import_array()’ defined but not used [-Wunused-function] 2021-07-14T07:35:42,941 1464 | _import_array(void) 2021-07-14T07:35:42,941 | ^~~~~~~~~~~~~ 2021-07-14T07:35:42,956 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-14T07:35:43,089 Building wheel for probabilistic2020 (setup.py): finished with status 'error' 2021-07-14T07:35:43,090 ERROR: Failed building wheel for probabilistic2020 2021-07-14T07:35:43,090 Running setup.py clean for probabilistic2020 2021-07-14T07:35:43,091 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9mp5__9q/probabilistic2020_7d96e8da7480407f84c377bd8e5c535c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9mp5__9q/probabilistic2020_7d96e8da7480407f84c377bd8e5c535c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-14T07:35:44,804 running clean 2021-07-14T07:35:44,808 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-14T07:35:44,810 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-14T07:35:44,824 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-14T07:35:44,825 'build/scripts-3.9' does not exist -- can't clean it 2021-07-14T07:35:44,825 removing 'build' 2021-07-14T07:35:44,943 Failed to build probabilistic2020 2021-07-14T07:35:44,944 ERROR: Failed to build one or more wheels 2021-07-14T07:35:44,945 Exception information: 2021-07-14T07:35:44,945 Traceback (most recent call last): 2021-07-14T07:35:44,945 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-14T07:35:44,945 status = self.run(options, args) 2021-07-14T07:35:44,945 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-14T07:35:44,945 return func(self, options, args) 2021-07-14T07:35:44,945 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-14T07:35:44,945 raise CommandError( 2021-07-14T07:35:44,945 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-14T07:35:44,948 Removed build tracker: '/tmp/pip-req-tracker-6oij0x9g'