2021-07-14T15:30:47,736 Created temporary directory: /tmp/pip-ephem-wheel-cache-j6p37ggh
2021-07-14T15:30:47,739 Created temporary directory: /tmp/pip-req-tracker-lq08c7tp
2021-07-14T15:30:47,739 Initialized build tracking at /tmp/pip-req-tracker-lq08c7tp
2021-07-14T15:30:47,739 Created build tracker: /tmp/pip-req-tracker-lq08c7tp
2021-07-14T15:30:47,739 Entered build tracker: /tmp/pip-req-tracker-lq08c7tp
2021-07-14T15:30:47,740 Created temporary directory: /tmp/pip-wheel-zm47vkxu
2021-07-14T15:30:47,770 1 location(s) to search for versions of deepgmap:
2021-07-14T15:30:47,770 * https://pypi.org/simple/deepgmap/
2021-07-14T15:30:47,770 Fetching project page and analyzing links: https://pypi.org/simple/deepgmap/
2021-07-14T15:30:47,771 Getting page https://pypi.org/simple/deepgmap/
2021-07-14T15:30:47,772 Found index url https://pypi.org/simple
2021-07-14T15:30:47,954   Found link https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 (from https://pypi.org/simple/deepgmap/), version: 0.2.0
2021-07-14T15:30:47,955 Skipping link: not a file: https://pypi.org/simple/deepgmap/
2021-07-14T15:30:47,972 Given no hashes to check 1 links for project 'deepgmap': discarding no candidates
2021-07-14T15:30:47,991 Collecting deepgmap==0.2.0
2021-07-14T15:30:47,992   Created temporary directory: /tmp/pip-unpack-ukxydfwn
2021-07-14T15:30:48,034   Downloading DeepGMAP-0.2.0.tar.gz (191 kB)
2021-07-14T15:30:48,344   Added deepgmap==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 to build tracker '/tmp/pip-req-tracker-lq08c7tp'
2021-07-14T15:30:48,345     Running setup.py (path:/tmp/pip-wheel-zm47vkxu/deepgmap_39e11fd7ce464c8893f7762f4d94e9f8/setup.py) egg_info for package deepgmap
2021-07-14T15:30:48,345     Created temporary directory: /tmp/pip-pip-egg-info-69av2k_9
2021-07-14T15:30:48,346     Running command python setup.py egg_info
2021-07-14T15:30:49,396     running egg_info
2021-07-14T15:30:49,399     creating /tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info
2021-07-14T15:30:49,400     writing /tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/PKG-INFO
2021-07-14T15:30:49,403     writing dependency_links to /tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/dependency_links.txt
2021-07-14T15:30:49,406     writing requirements to /tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/requires.txt
2021-07-14T15:30:49,407     writing top-level names to /tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/top_level.txt
2021-07-14T15:30:49,409     writing manifest file '/tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/SOURCES.txt'
2021-07-14T15:30:49,570     reading manifest file '/tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/SOURCES.txt'
2021-07-14T15:30:49,577     writing manifest file '/tmp/pip-pip-egg-info-69av2k_9/DeepGMAP.egg-info/SOURCES.txt'
2021-07-14T15:30:49,643   Source in /tmp/pip-wheel-zm47vkxu/deepgmap_39e11fd7ce464c8893f7762f4d94e9f8 has version 0.2.0, which satisfies requirement deepgmap==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43
2021-07-14T15:30:49,644   Removed deepgmap==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz#sha256=8ce141cb3002e11cfa516d78254d98f8f1b5cc699fbe4efec287c69b68089d43 from build tracker '/tmp/pip-req-tracker-lq08c7tp'
2021-07-14T15:30:49,649 Created temporary directory: /tmp/pip-unpack-z2fh6uz6
2021-07-14T15:30:49,649 Building wheels for collected packages: deepgmap
2021-07-14T15:30:49,653   Created temporary directory: /tmp/pip-wheel-2tcq1nn0
2021-07-14T15:30:49,653   Building wheel for deepgmap (setup.py): started
2021-07-14T15:30:49,653   Destination directory: /tmp/pip-wheel-2tcq1nn0
2021-07-14T15:30:49,654   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-zm47vkxu/deepgmap_39e11fd7ce464c8893f7762f4d94e9f8/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-zm47vkxu/deepgmap_39e11fd7ce464c8893f7762f4d94e9f8/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-2tcq1nn0
2021-07-14T15:30:50,728   running bdist_wheel
2021-07-14T15:30:50,733   running build
2021-07-14T15:30:50,733   running build_py
2021-07-14T15:30:50,874   creating build
2021-07-14T15:30:50,875   creating build/lib.linux-armv7l-3.9
2021-07-14T15:30:50,876   creating build/lib.linux-armv7l-3.9/deepgmap
2021-07-14T15:30:50,877   copying deepgmap/__init__.py -> build/lib.linux-armv7l-3.9/deepgmap
2021-07-14T15:30:50,880   creating build/lib.linux-armv7l-3.9/deepgmap/train
2021-07-14T15:30:50,881   copying deepgmap/train/deepshark_local_oop_1d.py -> build/lib.linux-armv7l-3.9/deepgmap/train
2021-07-14T15:30:50,884   copying deepgmap/train/train_loop.py -> build/lib.linux-armv7l-3.9/deepgmap/train
2021-07-14T15:30:50,887   copying deepgmap/train/__init__.py -> build/lib.linux-armv7l-3.9/deepgmap/train
2021-07-14T15:30:50,890   creating build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,891   copying deepgmap/network_constructors/danq4.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,894   copying deepgmap/network_constructors/danq3.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,897   copying deepgmap/network_constructors/basset.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,900   copying deepgmap/network_constructors/conv4.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,903   copying deepgmap/network_constructors/conv4frssplus.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,906   copying deepgmap/network_constructors/danqblock.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,909   copying deepgmap/network_constructors/template_model.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,911   copying deepgmap/network_constructors/conv3rc.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,914   copying deepgmap/network_constructors/conv4frss3.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,917   copying deepgmap/network_constructors/danq.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,920   copying deepgmap/network_constructors/conv4frssplus2.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,923   copying deepgmap/network_constructors/auc_calc.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,925   copying deepgmap/network_constructors/__init__.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,927   copying deepgmap/network_constructors/danqfrss.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,930   copying deepgmap/network_constructors/conv4frssplus4.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,933   copying deepgmap/network_constructors/conv4frss2.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,936   copying deepgmap/network_constructors/conv3frss.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,939   copying deepgmap/network_constructors/deepsea.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,942   copying deepgmap/network_constructors/conv4frssplus3.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,945   copying deepgmap/network_constructors/conv4frss.py -> build/lib.linux-armv7l-3.9/deepgmap/network_constructors
2021-07-14T15:30:50,950   creating build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,951   copying deepgmap/post_train_tools/sequence_visualizer2.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,954   copying deepgmap/post_train_tools/deconv_deepshark_local4.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,958   copying deepgmap/post_train_tools/class_saliency_extraction.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,960   copying deepgmap/post_train_tools/motif_compare2.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,963   copying deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,965   copying deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,968   copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,970   copying deepgmap/post_train_tools/predict.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,973   copying deepgmap/post_train_tools/unpooling.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,976   copying deepgmap/post_train_tools/kernel_visualizer.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,979   copying deepgmap/post_train_tools/deconv_deepshark_local_extend.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,982   copying deepgmap/post_train_tools/ROC_space_plotter3.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,984   copying deepgmap/post_train_tools/deconv_deepshark_local3.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,987   copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,990   copying deepgmap/post_train_tools/trained_deepshark_local_pca.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,992   copying deepgmap/post_train_tools/precision_recall_handmade.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,995   copying deepgmap/post_train_tools/merge_bigwig.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:50,997   copying deepgmap/post_train_tools/fimo_to_numpy_array.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,000   copying deepgmap/post_train_tools/PCA.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,002   copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,004   copying deepgmap/post_train_tools/__init__.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,006   copying deepgmap/post_train_tools/ROC_space_plotter.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,008   copying deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,011   copying deepgmap/post_train_tools/Clustering_analizer.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,013   copying deepgmap/post_train_tools/kernel_visualizer2.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,015   copying deepgmap/post_train_tools/sequence_visualizer.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,018   copying deepgmap/post_train_tools/ROC_space_plotter2.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,020   copying deepgmap/post_train_tools/randomize_labels.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,022   copying deepgmap/post_train_tools/motif_compare.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,025   copying deepgmap/post_train_tools/activation_maximization.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,028   copying deepgmap/post_train_tools/compare_narrowPeak_scores.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,030   copying deepgmap/post_train_tools/deconvolution_to_signal.py -> build/lib.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:51,034   creating build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,035   copying deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,038   copying deepgmap/data_preprocessing_tools/pick_one_chromosome.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,040   copying deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,043   copying deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,045   copying deepgmap/data_preprocessing_tools/genome_file_maker.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,047   copying deepgmap/data_preprocessing_tools/setup.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,049   copying deepgmap/data_preprocessing_tools/genome_labeling2.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,052   copying deepgmap/data_preprocessing_tools/seq_to_binary.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,054   copying deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,057   copying deepgmap/data_preprocessing_tools/bed_file_500.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,059   copying deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,062   copying deepgmap/data_preprocessing_tools/__init__.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,064   copying deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,066   copying deepgmap/data_preprocessing_tools/remove_excess_negatives.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,068   copying deepgmap/data_preprocessing_tools/remove_chr.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,070   copying deepgmap/data_preprocessing_tools/genome_labeling.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,071   copying deepgmap/data_preprocessing_tools/genome_divider.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,073   copying deepgmap/data_preprocessing_tools/genome_labeling_compare.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,075   copying deepgmap/data_preprocessing_tools/remove_variant_annotations.py -> build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,079   creating build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,080   copying deepgmap/misc/edit_labeled_file.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,082   copying deepgmap/misc/dataset_checker_multiple_label.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,084   copying deepgmap/misc/Constants.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,086   copying deepgmap/misc/gff_to_colored_bed.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,088   copying deepgmap/misc/fasta_file_from_labeled.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,090   copying deepgmap/misc/bed_file_compare2.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,092   copying deepgmap/misc/kernel_distribution_analizer.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,094   copying deepgmap/misc/bed_file_compare.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,096   copying deepgmap/misc/pickup_pos_seq_region.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,098   copying deepgmap/misc/dataset_checker.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,100   copying deepgmap/misc/reduce_negatives.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,102   copying deepgmap/misc/randomdna2.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,104   copying deepgmap/misc/compare_deepsea_data.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,106   copying deepgmap/misc/small_tools.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,108   copying deepgmap/misc/motif_logo_creator.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,109   copying deepgmap/misc/TSS_bedfile.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,111   copying deepgmap/misc/__init__.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,113   copying deepgmap/misc/box_plot.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,115   copying deepgmap/misc/randomdna.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,117   copying deepgmap/misc/spearman_r.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,119   copying deepgmap/misc/optimal_frip_cutoff.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,120   copying deepgmap/misc/fix_fasta.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,122   copying deepgmap/misc/deepsea_anal.py -> build/lib.linux-armv7l-3.9/deepgmap/misc
2021-07-14T15:30:51,134   running build_ext
2021-07-14T15:30:51,194   skipping 'deepgmap/data_preprocessing_tools/seq_to_binary2.c' Cython extension (up-to-date)
2021-07-14T15:30:51,194   skipping 'deepgmap/post_train_tools/cython_util.c' Cython extension (up-to-date)
2021-07-14T15:30:51,195   building 'deepgmap.data_preprocessing_tools.seq_to_binary2' extension
2021-07-14T15:30:51,195   creating build/temp.linux-armv7l-3.9
2021-07-14T15:30:51,195   creating build/temp.linux-armv7l-3.9/deepgmap
2021-07-14T15:30:51,196   creating build/temp.linux-armv7l-3.9/deepgmap/data_preprocessing_tools
2021-07-14T15:30:51,197   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c deepgmap/data_preprocessing_tools/seq_to_binary2.c -o build/temp.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/seq_to_binary2.o
2021-07-14T15:30:51,665   deepgmap/data_preprocessing_tools/seq_to_binary2.c: In function ‘__Pyx_ParseOptionalKeywords’:
2021-07-14T15:30:51,668   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7389:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,669    7389 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,669         |                     ^
2021-07-14T15:30:51,669   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,670                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,670                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,670   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,670     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,670         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,674   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7389:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,674    7389 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,674         |                     ^
2021-07-14T15:30:51,674   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,674                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,674                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,674   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:51,675     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:51,675         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,678   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7389:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,678    7389 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,678         |                     ^
2021-07-14T15:30:51,678   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,679                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,679                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,679   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,679     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,679         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,682   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7389:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,682    7389 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,683         |                     ^
2021-07-14T15:30:51,683   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,683                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,683                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,683   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,683     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,683         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,686   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7389:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,687    7389 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,687         |                     ^
2021-07-14T15:30:51,687   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,687                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,687                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,687   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:51,687     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:51,687         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,691   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7389:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,691    7389 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,691         |                     ^
2021-07-14T15:30:51,691   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,691                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,691                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,692   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,692     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,692         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,696   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7405:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,696    7405 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,696         |                         ^
2021-07-14T15:30:51,697   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,697                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,697                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,697   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,697     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,697         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,700   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7405:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,701    7405 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,701         |                         ^
2021-07-14T15:30:51,701   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,701                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,701                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,701   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:51,701     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:51,701         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,705   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7405:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,705    7405 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,705         |                         ^
2021-07-14T15:30:51,705   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,705                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,705                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,705   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,706     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,706         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,709   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7405:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,709    7405 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,709         |                         ^
2021-07-14T15:30:51,709   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,709                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,710                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,710   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,710     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,710         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,713   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7405:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,713    7405 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,713         |                         ^
2021-07-14T15:30:51,714   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,714                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,714                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,714   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:51,714     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:51,714         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:51,717   deepgmap/data_preprocessing_tools/seq_to_binary2.c:7405:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:51,718    7405 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:51,718         |                         ^
2021-07-14T15:30:51,718   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:51,718                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:51,718                    from deepgmap/data_preprocessing_tools/seq_to_binary2.c:4:
2021-07-14T15:30:51,718   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:51,718     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:51,718         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,333   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/seq_to_binary2.o -o build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-39-arm-linux-gnueabihf.so
2021-07-14T15:30:59,456   building 'deepgmap.post_train_tools.cython_util' extension
2021-07-14T15:30:59,457   creating build/temp.linux-armv7l-3.9/deepgmap/post_train_tools
2021-07-14T15:30:59,457   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c deepgmap/post_train_tools/cython_util.c -o build/temp.linux-armv7l-3.9/deepgmap/post_train_tools/cython_util.o
2021-07-14T15:30:59,954   deepgmap/post_train_tools/cython_util.c: In function ‘__Pyx_ParseOptionalKeywords’:
2021-07-14T15:30:59,956   deepgmap/post_train_tools/cython_util.c:5369:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,956    5369 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,957         |                     ^
2021-07-14T15:30:59,957   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,957                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,957                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,957   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,957     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,958         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,960   deepgmap/post_train_tools/cython_util.c:5369:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,960    5369 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,961         |                     ^
2021-07-14T15:30:59,961   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,961                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,961                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,961   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:59,961     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:59,961         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,964   deepgmap/post_train_tools/cython_util.c:5369:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,964    5369 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,964         |                     ^
2021-07-14T15:30:59,964   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,964                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,964                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,964   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,964     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,965         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,967   deepgmap/post_train_tools/cython_util.c:5369:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,967    5369 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,967         |                     ^
2021-07-14T15:30:59,967   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,967                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,968                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,968   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,968     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,968         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,970   deepgmap/post_train_tools/cython_util.c:5369:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,970    5369 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,971         |                     ^
2021-07-14T15:30:59,971   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,971                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,971                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,971   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:59,971     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:59,971         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,974   deepgmap/post_train_tools/cython_util.c:5369:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,974    5369 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,974         |                     ^
2021-07-14T15:30:59,974   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,974                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,974                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,974   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,975     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,975         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,978   deepgmap/post_train_tools/cython_util.c:5385:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,978    5385 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,978         |                         ^
2021-07-14T15:30:59,978   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,979                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,979                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,979   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,979     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,979         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,981   deepgmap/post_train_tools/cython_util.c:5385:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,981    5385 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,981         |                         ^
2021-07-14T15:30:59,982   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,982                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,982                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,982   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:59,982     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:59,982         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,985   deepgmap/post_train_tools/cython_util.c:5385:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,985    5385 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,985         |                         ^
2021-07-14T15:30:59,985   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,985                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,985                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,985   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,985     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,986         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,988   deepgmap/post_train_tools/cython_util.c:5385:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,988    5385 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,988         |                         ^
2021-07-14T15:30:59,988   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,989                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,989                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,989   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,989     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,989         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,991   deepgmap/post_train_tools/cython_util.c:5385:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,991    5385 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,992         |                         ^
2021-07-14T15:30:59,992   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,992                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,992                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,992   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T15:30:59,992     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T15:30:59,992         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T15:30:59,995   deepgmap/post_train_tools/cython_util.c:5385:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T15:30:59,995    5385 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T15:30:59,995         |                         ^
2021-07-14T15:30:59,995   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T15:30:59,995                    from /usr/include/python3.9/Python.h:97,
2021-07-14T15:30:59,995                    from deepgmap/post_train_tools/cython_util.c:4:
2021-07-14T15:30:59,995   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T15:30:59,996     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T15:30:59,996         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T15:31:11,870   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/deepgmap/post_train_tools/cython_util.o -o build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/cython_util.cpython-39-arm-linux-gnueabihf.so
2021-07-14T15:31:12,005   running build_scripts
2021-07-14T15:31:12,006   creating build/scripts-3.9
2021-07-14T15:31:12,008   copying and adjusting bin/deepgmap -> build/scripts-3.9
2021-07-14T15:31:12,010   changing mode of build/scripts-3.9/deepgmap from 644 to 755
2021-07-14T15:31:12,019   installing to build/bdist.linux-armv7l/wheel
2021-07-14T15:31:12,019   running install
2021-07-14T15:31:12,020   running install_lib
2021-07-14T15:31:12,024   creating build/bdist.linux-armv7l
2021-07-14T15:31:12,025   creating build/bdist.linux-armv7l/wheel
2021-07-14T15:31:12,027   creating build/bdist.linux-armv7l/wheel/deepgmap
2021-07-14T15:31:12,029   creating build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,030   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/sequence_visualizer2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,033   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/deconv_deepshark_local4.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,036   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/class_saliency_extraction.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,039   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/motif_compare2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,041   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,043   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,046   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,048   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/predict.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,051   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/unpooling.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,053   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/kernel_visualizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,056   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/deconv_deepshark_local_extend.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,058   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/ROC_space_plotter3.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,060   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/cython_util.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,076   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/deconv_deepshark_local3.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,079   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,082   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/trained_deepshark_local_pca.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,085   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/precision_recall_handmade.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,087   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/merge_bigwig.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,090   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/fimo_to_numpy_array.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,093   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/PCA.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,095   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,097   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,099   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/ROC_space_plotter.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,101   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,104   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/Clustering_analizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,107   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/kernel_visualizer2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,109   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/sequence_visualizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,112   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/ROC_space_plotter2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,115   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/randomize_labels.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,117   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/motif_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,120   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/activation_maximization.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,123   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/compare_narrowPeak_scores.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,125   copying build/lib.linux-armv7l-3.9/deepgmap/post_train_tools/deconvolution_to_signal.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2021-07-14T15:31:12,128   creating build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,130   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,133   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/pick_one_chromosome.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,135   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,138   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,154   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,156   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/genome_file_maker.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,159   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/setup.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,161   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/genome_labeling2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,164   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/seq_to_binary.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,166   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,170   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/bed_file_500.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,172   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,175   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,177   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,180   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/remove_excess_negatives.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,182   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/remove_chr.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,184   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/genome_labeling.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,187   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/genome_divider.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,190   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/genome_labeling_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,192   copying build/lib.linux-armv7l-3.9/deepgmap/data_preprocessing_tools/remove_variant_annotations.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2021-07-14T15:31:12,195   creating build/bdist.linux-armv7l/wheel/deepgmap/train
2021-07-14T15:31:12,197   copying build/lib.linux-armv7l-3.9/deepgmap/train/deepshark_local_oop_1d.py -> build/bdist.linux-armv7l/wheel/deepgmap/train
2021-07-14T15:31:12,200   copying build/lib.linux-armv7l-3.9/deepgmap/train/train_loop.py -> build/bdist.linux-armv7l/wheel/deepgmap/train
2021-07-14T15:31:12,204   copying build/lib.linux-armv7l-3.9/deepgmap/train/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/train
2021-07-14T15:31:12,206   copying build/lib.linux-armv7l-3.9/deepgmap/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap
2021-07-14T15:31:12,209   creating build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,211   copying build/lib.linux-armv7l-3.9/deepgmap/misc/edit_labeled_file.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,213   copying build/lib.linux-armv7l-3.9/deepgmap/misc/dataset_checker_multiple_label.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,216   copying build/lib.linux-armv7l-3.9/deepgmap/misc/Constants.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,218   copying build/lib.linux-armv7l-3.9/deepgmap/misc/gff_to_colored_bed.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,221   copying build/lib.linux-armv7l-3.9/deepgmap/misc/fasta_file_from_labeled.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,223   copying build/lib.linux-armv7l-3.9/deepgmap/misc/bed_file_compare2.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,225   copying build/lib.linux-armv7l-3.9/deepgmap/misc/kernel_distribution_analizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,228   copying build/lib.linux-armv7l-3.9/deepgmap/misc/bed_file_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,230   copying build/lib.linux-armv7l-3.9/deepgmap/misc/pickup_pos_seq_region.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,232   copying build/lib.linux-armv7l-3.9/deepgmap/misc/dataset_checker.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,235   copying build/lib.linux-armv7l-3.9/deepgmap/misc/reduce_negatives.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,237   copying build/lib.linux-armv7l-3.9/deepgmap/misc/randomdna2.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,239   copying build/lib.linux-armv7l-3.9/deepgmap/misc/compare_deepsea_data.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,242   copying build/lib.linux-armv7l-3.9/deepgmap/misc/small_tools.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,244   copying build/lib.linux-armv7l-3.9/deepgmap/misc/motif_logo_creator.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,246   copying build/lib.linux-armv7l-3.9/deepgmap/misc/TSS_bedfile.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,249   copying build/lib.linux-armv7l-3.9/deepgmap/misc/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,251   copying build/lib.linux-armv7l-3.9/deepgmap/misc/box_plot.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,253   copying build/lib.linux-armv7l-3.9/deepgmap/misc/randomdna.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,255   copying build/lib.linux-armv7l-3.9/deepgmap/misc/spearman_r.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,258   copying build/lib.linux-armv7l-3.9/deepgmap/misc/optimal_frip_cutoff.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,260   copying build/lib.linux-armv7l-3.9/deepgmap/misc/fix_fasta.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,262   copying build/lib.linux-armv7l-3.9/deepgmap/misc/deepsea_anal.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2021-07-14T15:31:12,266   creating build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,267   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/danq4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,270   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/danq3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,274   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/basset.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,278   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,281   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frssplus.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,284   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/danqblock.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,288   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/template_model.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,290   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv3rc.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,293   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frss3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,297   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/danq.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,300   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frssplus2.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,304   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/auc_calc.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,306   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,308   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/danqfrss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,311   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frssplus4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,315   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frss2.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,318   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv3frss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,321   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/deepsea.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,325   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frssplus3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,328   copying build/lib.linux-armv7l-3.9/deepgmap/network_constructors/conv4frss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2021-07-14T15:31:12,331   running install_egg_info
2021-07-14T15:31:12,358   running egg_info
2021-07-14T15:31:12,359   writing DeepGMAP.egg-info/PKG-INFO
2021-07-14T15:31:12,362   writing dependency_links to DeepGMAP.egg-info/dependency_links.txt
2021-07-14T15:31:12,364   writing requirements to DeepGMAP.egg-info/requires.txt
2021-07-14T15:31:12,365   writing top-level names to DeepGMAP.egg-info/top_level.txt
2021-07-14T15:31:12,393   reading manifest file 'DeepGMAP.egg-info/SOURCES.txt'
2021-07-14T15:31:12,406   writing manifest file 'DeepGMAP.egg-info/SOURCES.txt'
2021-07-14T15:31:12,409   Copying DeepGMAP.egg-info to build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0-py3.9.egg-info
2021-07-14T15:31:12,421   running install_scripts
2021-07-14T15:31:12,480   creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data
2021-07-14T15:31:12,481   creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts
2021-07-14T15:31:12,482   copying build/scripts-3.9/deepgmap -> build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts
2021-07-14T15:31:12,485   changing mode of build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts/deepgmap to 755
2021-07-14T15:31:12,511   creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.dist-info/WHEEL
2021-07-14T15:31:12,514   creating '/tmp/pip-wheel-2tcq1nn0/DeepGMAP-0.2.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-14T15:31:12,519   adding 'DeepGMAP-0.2.0.data/scripts/deepgmap'
2021-07-14T15:31:12,522   adding 'deepgmap/__init__.py'
2021-07-14T15:31:12,525   adding 'deepgmap/data_preprocessing_tools/__init__.py'
2021-07-14T15:31:12,526   adding 'deepgmap/data_preprocessing_tools/bed_file_500.py'
2021-07-14T15:31:12,528   adding 'deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py'
2021-07-14T15:31:12,529   adding 'deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py'
2021-07-14T15:31:12,531   adding 'deepgmap/data_preprocessing_tools/genome_divider.py'
2021-07-14T15:31:12,532   adding 'deepgmap/data_preprocessing_tools/genome_file_maker.py'
2021-07-14T15:31:12,534   adding 'deepgmap/data_preprocessing_tools/genome_labeling.py'
2021-07-14T15:31:12,536   adding 'deepgmap/data_preprocessing_tools/genome_labeling2.py'
2021-07-14T15:31:12,538   adding 'deepgmap/data_preprocessing_tools/genome_labeling_compare.py'
2021-07-14T15:31:12,539   adding 'deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py'
2021-07-14T15:31:12,542   adding 'deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py'
2021-07-14T15:31:12,545   adding 'deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py'
2021-07-14T15:31:12,548   adding 'deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py'
2021-07-14T15:31:12,549   adding 'deepgmap/data_preprocessing_tools/pick_one_chromosome.py'
2021-07-14T15:31:12,554   adding 'deepgmap/data_preprocessing_tools/remove_chr.py'
2021-07-14T15:31:12,555   adding 'deepgmap/data_preprocessing_tools/remove_excess_negatives.py'
2021-07-14T15:31:12,557   adding 'deepgmap/data_preprocessing_tools/remove_variant_annotations.py'
2021-07-14T15:31:12,558   adding 'deepgmap/data_preprocessing_tools/seq_to_binary.py'
2021-07-14T15:31:12,651   adding 'deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-39-arm-linux-gnueabihf.so'
2021-07-14T15:31:12,657   adding 'deepgmap/data_preprocessing_tools/setup.py'
2021-07-14T15:31:12,659   adding 'deepgmap/misc/Constants.py'
2021-07-14T15:31:12,660   adding 'deepgmap/misc/TSS_bedfile.py'
2021-07-14T15:31:12,662   adding 'deepgmap/misc/__init__.py'
2021-07-14T15:31:12,663   adding 'deepgmap/misc/bed_file_compare.py'
2021-07-14T15:31:12,665   adding 'deepgmap/misc/bed_file_compare2.py'
2021-07-14T15:31:12,666   adding 'deepgmap/misc/box_plot.py'
2021-07-14T15:31:12,668   adding 'deepgmap/misc/compare_deepsea_data.py'
2021-07-14T15:31:12,669   adding 'deepgmap/misc/dataset_checker.py'
2021-07-14T15:31:12,670   adding 'deepgmap/misc/dataset_checker_multiple_label.py'
2021-07-14T15:31:12,672   adding 'deepgmap/misc/deepsea_anal.py'
2021-07-14T15:31:12,673   adding 'deepgmap/misc/edit_labeled_file.py'
2021-07-14T15:31:12,675   adding 'deepgmap/misc/fasta_file_from_labeled.py'
2021-07-14T15:31:12,676   adding 'deepgmap/misc/fix_fasta.py'
2021-07-14T15:31:12,678   adding 'deepgmap/misc/gff_to_colored_bed.py'
2021-07-14T15:31:12,679   adding 'deepgmap/misc/kernel_distribution_analizer.py'
2021-07-14T15:31:12,681   adding 'deepgmap/misc/motif_logo_creator.py'
2021-07-14T15:31:12,683   adding 'deepgmap/misc/optimal_frip_cutoff.py'
2021-07-14T15:31:12,684   adding 'deepgmap/misc/pickup_pos_seq_region.py'
2021-07-14T15:31:12,685   adding 'deepgmap/misc/randomdna.py'
2021-07-14T15:31:12,687   adding 'deepgmap/misc/randomdna2.py'
2021-07-14T15:31:12,689   adding 'deepgmap/misc/reduce_negatives.py'
2021-07-14T15:31:12,690   adding 'deepgmap/misc/small_tools.py'
2021-07-14T15:31:12,691   adding 'deepgmap/misc/spearman_r.py'
2021-07-14T15:31:12,693   adding 'deepgmap/network_constructors/__init__.py'
2021-07-14T15:31:12,695   adding 'deepgmap/network_constructors/auc_calc.py'
2021-07-14T15:31:12,697   adding 'deepgmap/network_constructors/basset.py'
2021-07-14T15:31:12,700   adding 'deepgmap/network_constructors/conv3frss.py'
2021-07-14T15:31:12,702   adding 'deepgmap/network_constructors/conv3rc.py'
2021-07-14T15:31:12,705   adding 'deepgmap/network_constructors/conv4.py'
2021-07-14T15:31:12,707   adding 'deepgmap/network_constructors/conv4frss.py'
2021-07-14T15:31:12,710   adding 'deepgmap/network_constructors/conv4frss2.py'
2021-07-14T15:31:12,712   adding 'deepgmap/network_constructors/conv4frss3.py'
2021-07-14T15:31:12,715   adding 'deepgmap/network_constructors/conv4frssplus.py'
2021-07-14T15:31:12,717   adding 'deepgmap/network_constructors/conv4frssplus2.py'
2021-07-14T15:31:12,720   adding 'deepgmap/network_constructors/conv4frssplus3.py'
2021-07-14T15:31:12,722   adding 'deepgmap/network_constructors/conv4frssplus4.py'
2021-07-14T15:31:12,724   adding 'deepgmap/network_constructors/danq.py'
2021-07-14T15:31:12,727   adding 'deepgmap/network_constructors/danq3.py'
2021-07-14T15:31:12,730   adding 'deepgmap/network_constructors/danq4.py'
2021-07-14T15:31:12,732   adding 'deepgmap/network_constructors/danqblock.py'
2021-07-14T15:31:12,734   adding 'deepgmap/network_constructors/danqfrss.py'
2021-07-14T15:31:12,736   adding 'deepgmap/network_constructors/deepsea.py'
2021-07-14T15:31:12,738   adding 'deepgmap/network_constructors/template_model.py'
2021-07-14T15:31:12,741   adding 'deepgmap/post_train_tools/Clustering_analizer.py'
2021-07-14T15:31:12,743   adding 'deepgmap/post_train_tools/PCA.py'
2021-07-14T15:31:12,744   adding 'deepgmap/post_train_tools/ROC_space_plotter.py'
2021-07-14T15:31:12,746   adding 'deepgmap/post_train_tools/ROC_space_plotter2.py'
2021-07-14T15:31:12,748   adding 'deepgmap/post_train_tools/ROC_space_plotter3.py'
2021-07-14T15:31:12,749   adding 'deepgmap/post_train_tools/__init__.py'
2021-07-14T15:31:12,751   adding 'deepgmap/post_train_tools/activation_maximization.py'
2021-07-14T15:31:12,754   adding 'deepgmap/post_train_tools/class_saliency_extraction.py'
2021-07-14T15:31:12,756   adding 'deepgmap/post_train_tools/compare_narrowPeak_scores.py'
2021-07-14T15:31:12,870   adding 'deepgmap/post_train_tools/cython_util.cpython-39-arm-linux-gnueabihf.so'
2021-07-14T15:31:12,876   adding 'deepgmap/post_train_tools/deconv_deepshark_local3.py'
2021-07-14T15:31:12,879   adding 'deepgmap/post_train_tools/deconv_deepshark_local4.py'
2021-07-14T15:31:12,880   adding 'deepgmap/post_train_tools/deconv_deepshark_local_extend.py'
2021-07-14T15:31:12,882   adding 'deepgmap/post_train_tools/deconvolution_to_signal.py'
2021-07-14T15:31:12,884   adding 'deepgmap/post_train_tools/fimo_to_numpy_array.py'
2021-07-14T15:31:12,886   adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py'
2021-07-14T15:31:12,888   adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py'
2021-07-14T15:31:12,889   adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py'
2021-07-14T15:31:12,892   adding 'deepgmap/post_train_tools/kernel_visualizer.py'
2021-07-14T15:31:12,894   adding 'deepgmap/post_train_tools/kernel_visualizer2.py'
2021-07-14T15:31:12,896   adding 'deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py'
2021-07-14T15:31:12,897   adding 'deepgmap/post_train_tools/merge_bigwig.py'
2021-07-14T15:31:12,899   adding 'deepgmap/post_train_tools/motif_compare.py'
2021-07-14T15:31:12,901   adding 'deepgmap/post_train_tools/motif_compare2.py'
2021-07-14T15:31:12,902   adding 'deepgmap/post_train_tools/precision_recall_handmade.py'
2021-07-14T15:31:12,905   adding 'deepgmap/post_train_tools/predict.py'
2021-07-14T15:31:12,907   adding 'deepgmap/post_train_tools/randomize_labels.py'
2021-07-14T15:31:12,908   adding 'deepgmap/post_train_tools/sequence_visualizer.py'
2021-07-14T15:31:12,910   adding 'deepgmap/post_train_tools/sequence_visualizer2.py'
2021-07-14T15:31:12,913   adding 'deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py'
2021-07-14T15:31:12,915   adding 'deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py'
2021-07-14T15:31:12,917   adding 'deepgmap/post_train_tools/trained_deepshark_local_pca.py'
2021-07-14T15:31:12,919   adding 'deepgmap/post_train_tools/unpooling.py'
2021-07-14T15:31:12,920   adding 'deepgmap/train/__init__.py'
2021-07-14T15:31:12,922   adding 'deepgmap/train/deepshark_local_oop_1d.py'
2021-07-14T15:31:12,925   adding 'deepgmap/train/train_loop.py'
2021-07-14T15:31:12,927   adding 'DeepGMAP-0.2.0.dist-info/METADATA'
2021-07-14T15:31:12,928   adding 'DeepGMAP-0.2.0.dist-info/WHEEL'
2021-07-14T15:31:12,929   adding 'DeepGMAP-0.2.0.dist-info/top_level.txt'
2021-07-14T15:31:12,931   adding 'DeepGMAP-0.2.0.dist-info/RECORD'
2021-07-14T15:31:12,947   removing build/bdist.linux-armv7l/wheel
2021-07-14T15:31:13,066   Building wheel for deepgmap (setup.py): finished with status 'done'
2021-07-14T15:31:13,074   Created wheel for deepgmap: filename=DeepGMAP-0.2.0-cp39-cp39-linux_armv7l.whl size=548451 sha256=04547fbb85e5b272eca3fb50e66dbb322178152fbaf1a0db1f22036b69aee102
2021-07-14T15:31:13,075   Stored in directory: /tmp/pip-ephem-wheel-cache-j6p37ggh/wheels/e7/94/ce/2fed1ed1ce03c169422e2ac5ff2f0b096731770c07063f4931
2021-07-14T15:31:13,087 Successfully built deepgmap
2021-07-14T15:31:13,109 Removed build tracker: '/tmp/pip-req-tracker-lq08c7tp'