2021-07-14T16:43:33,134 Created temporary directory: /tmp/pip-ephem-wheel-cache-c_gt2fhn 2021-07-14T16:43:33,139 Created temporary directory: /tmp/pip-req-tracker-3biopvzi 2021-07-14T16:43:33,140 Initialized build tracking at /tmp/pip-req-tracker-3biopvzi 2021-07-14T16:43:33,140 Created build tracker: /tmp/pip-req-tracker-3biopvzi 2021-07-14T16:43:33,141 Entered build tracker: /tmp/pip-req-tracker-3biopvzi 2021-07-14T16:43:33,142 Created temporary directory: /tmp/pip-wheel-b6zq9tra 2021-07-14T16:43:33,257 1 location(s) to search for versions of ssw-aligner: 2021-07-14T16:43:33,257 * https://pypi.org/simple/ssw-aligner/ 2021-07-14T16:43:33,258 Fetching project page and analyzing links: https://pypi.org/simple/ssw-aligner/ 2021-07-14T16:43:33,259 Getting page https://pypi.org/simple/ssw-aligner/ 2021-07-14T16:43:33,261 Found index url https://pypi.org/simple 2021-07-14T16:43:33,492 Found link https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz#sha256=351e349a3bdae762af3ae7b75ccc2b370249637b6f07bfc37b4dc49108c52622 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.0 2021-07-14T16:43:33,493 Found link https://files.pythonhosted.org/packages/db/90/df5f1864262c4dfdca23700b93fd6f12e7525d050c2e3a059f756ce3cb5c/ssw_aligner-0.0.1.tar.gz#sha256=e73c3131d28286036e24febfea053f1c7da307089aae45f67fafc52edd3efbcb (from https://pypi.org/simple/ssw-aligner/), version: 0.0.1 2021-07-14T16:43:33,494 Found link https://files.pythonhosted.org/packages/00/40/c2aee762db470efb345706da1fdafcba22fa9458f702f5867cbc2a2202f4/ssw_aligner-0.0.2.tar.gz#sha256=7eb5f68217f3b4e0cbae45efb1e0f51c49d4545f9023243e54b66392ff1e8b55 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.2 2021-07-14T16:43:33,495 Found link https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz#sha256=a2cb3c681fca5b51967474163c0ca51e9d22834785f06040570c9c9444c8cd40 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.3 2021-07-14T16:43:33,495 Found link https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz#sha256=093d4998d0b5bc43bf5549a764d25bff8b2d371963b8496b63049ff9fd360613 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.4 2021-07-14T16:43:33,496 Found link https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz#sha256=07074bd56e69ecd83aeb1aade3a63bf78c0f16a14afaca44fa27952f049bbd68 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.5 2021-07-14T16:43:33,497 Found link https://files.pythonhosted.org/packages/fe/60/131861d0d4250f27a65db140a09f8a208e5db084135ddbe7c7c580b45add/ssw_aligner-0.0.6.tar.gz#sha256=6e155f4d5f97cbf86711b20431a4213bbf02e635b74bd8a1b1b4c5c4ae14dbbc (from https://pypi.org/simple/ssw-aligner/), version: 0.0.6 2021-07-14T16:43:33,497 Found link https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz#sha256=ea2cd0f4a03dd2d49c7cc0d7f10ffaedfeb2f3bbc84e156f4c5e1d8c4a7cb538 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.7 2021-07-14T16:43:33,498 Found link https://files.pythonhosted.org/packages/77/9a/73d8f071e78956c30e012c3fc5f9735a0e28426dad0cb6fd534e26cdd7db/ssw_aligner-0.0.8.tar.gz#sha256=163a8d38e02f93114ed9be4605bbbcf59fc17e52fc26e1125f94be969be34c30 (from https://pypi.org/simple/ssw-aligner/), version: 0.0.8 2021-07-14T16:43:33,499 Skipping link: not a file: https://pypi.org/simple/ssw-aligner/ 2021-07-14T16:43:33,527 Given no hashes to check 1 links for project 'ssw-aligner': discarding no candidates 2021-07-14T16:43:33,558 Collecting ssw-aligner==0.0.7 2021-07-14T16:43:33,561 Created temporary directory: /tmp/pip-unpack-qk6kk2ta 2021-07-14T16:43:33,788 Downloading ssw_aligner-0.0.7.tar.gz (105 kB) 2021-07-14T16:43:33,940 Added ssw-aligner==0.0.7 from https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz#sha256=ea2cd0f4a03dd2d49c7cc0d7f10ffaedfeb2f3bbc84e156f4c5e1d8c4a7cb538 to build tracker '/tmp/pip-req-tracker-3biopvzi' 2021-07-14T16:43:33,942 Running setup.py (path:/tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b/setup.py) egg_info for package ssw-aligner 2021-07-14T16:43:33,943 Created temporary directory: /tmp/pip-pip-egg-info-09clcr09 2021-07-14T16:43:33,944 Running command python setup.py egg_info 2021-07-14T16:43:39,297 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b/ssw_aligner/ssw_wrapper.pyx 2021-07-14T16:43:39,298 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-14T16:43:45,228 Compiling ssw_aligner/ssw_wrapper.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd. 2021-07-14T16:43:45,229 [1/1] Cythonizing ssw_aligner/ssw_wrapper.pyx 2021-07-14T16:43:45,502 running egg_info 2021-07-14T16:43:45,506 creating /tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info 2021-07-14T16:43:45,508 writing /tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info/PKG-INFO 2021-07-14T16:43:45,511 writing dependency_links to /tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info/dependency_links.txt 2021-07-14T16:43:45,515 writing top-level names to /tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info/top_level.txt 2021-07-14T16:43:45,518 writing manifest file '/tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info/SOURCES.txt' 2021-07-14T16:43:45,725 reading manifest file '/tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info/SOURCES.txt' 2021-07-14T16:43:45,727 reading manifest template 'MANIFEST.in' 2021-07-14T16:43:45,729 warning: no files found matching 'RELEASE.md' 2021-07-14T16:43:45,739 writing manifest file '/tmp/pip-pip-egg-info-09clcr09/ssw_aligner.egg-info/SOURCES.txt' 2021-07-14T16:43:46,110 Source in /tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b has version 0.0.7, which satisfies requirement ssw-aligner==0.0.7 from https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz#sha256=ea2cd0f4a03dd2d49c7cc0d7f10ffaedfeb2f3bbc84e156f4c5e1d8c4a7cb538 2021-07-14T16:43:46,111 Removed ssw-aligner==0.0.7 from https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz#sha256=ea2cd0f4a03dd2d49c7cc0d7f10ffaedfeb2f3bbc84e156f4c5e1d8c4a7cb538 from build tracker '/tmp/pip-req-tracker-3biopvzi' 2021-07-14T16:43:46,138 Created temporary directory: /tmp/pip-unpack-x4cpw56i 2021-07-14T16:43:46,139 Building wheels for collected packages: ssw-aligner 2021-07-14T16:43:46,146 Created temporary directory: /tmp/pip-wheel-mxody5j7 2021-07-14T16:43:46,147 Building wheel for ssw-aligner (setup.py): started 2021-07-14T16:43:46,147 Destination directory: /tmp/pip-wheel-mxody5j7 2021-07-14T16:43:46,148 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-mxody5j7 2021-07-14T16:43:50,437 running bdist_wheel 2021-07-14T16:43:50,461 running build 2021-07-14T16:43:50,461 running build_py 2021-07-14T16:43:50,805 creating build 2021-07-14T16:43:50,805 creating build/lib.linux-armv7l-3.9 2021-07-14T16:43:50,806 creating build/lib.linux-armv7l-3.9/ssw_aligner 2021-07-14T16:43:50,808 copying ssw_aligner/__init__.py -> build/lib.linux-armv7l-3.9/ssw_aligner 2021-07-14T16:43:50,812 creating build/lib.linux-armv7l-3.9/ssw_aligner/_lib 2021-07-14T16:43:50,814 copying ssw_aligner/_lib/__init__.py -> build/lib.linux-armv7l-3.9/ssw_aligner/_lib 2021-07-14T16:43:50,819 running build_ext 2021-07-14T16:43:50,826 building 'ssw_aligner.ssw_wrapper' extension 2021-07-14T16:43:50,827 creating build/temp.linux-armv7l-3.9 2021-07-14T16:43:50,828 creating build/temp.linux-armv7l-3.9/ssw_aligner 2021-07-14T16:43:50,829 creating build/temp.linux-armv7l-3.9/ssw_aligner/_lib 2021-07-14T16:43:50,830 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Issw_aligner -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c ssw_aligner/_lib/ssw.c -o build/temp.linux-armv7l-3.9/ssw_aligner/_lib/ssw.o -Wno-error=declaration-after-statement 2021-07-14T16:43:50,914 ssw_aligner/_lib/ssw.c:38:10: fatal error: emmintrin.h: No such file or directory 2021-07-14T16:43:50,915 38 | #include 2021-07-14T16:43:50,915 | ^~~~~~~~~~~~~ 2021-07-14T16:43:50,915 compilation terminated. 2021-07-14T16:43:50,919 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-14T16:43:51,126 Building wheel for ssw-aligner (setup.py): finished with status 'error' 2021-07-14T16:43:51,126 ERROR: Failed building wheel for ssw-aligner 2021-07-14T16:43:51,128 Running setup.py clean for ssw-aligner 2021-07-14T16:43:51,128 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b6zq9tra/ssw-aligner_881322a2fe3e4ca0b29e8e6ffe877a9b/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-14T16:43:54,505 running clean 2021-07-14T16:43:54,509 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-14T16:43:54,513 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-14T16:43:54,517 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-14T16:43:54,518 'build/scripts-3.9' does not exist -- can't clean it 2021-07-14T16:43:54,518 removing 'build' 2021-07-14T16:43:54,679 Failed to build ssw-aligner 2021-07-14T16:43:54,679 ERROR: Failed to build one or more wheels 2021-07-14T16:43:54,681 Exception information: 2021-07-14T16:43:54,681 Traceback (most recent call last): 2021-07-14T16:43:54,681 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-14T16:43:54,681 status = self.run(options, args) 2021-07-14T16:43:54,681 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-14T16:43:54,681 return func(self, options, args) 2021-07-14T16:43:54,681 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-14T16:43:54,681 raise CommandError( 2021-07-14T16:43:54,681 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-14T16:43:54,691 Removed build tracker: '/tmp/pip-req-tracker-3biopvzi'