2021-07-14T17:06:38,624 Created temporary directory: /tmp/pip-ephem-wheel-cache-jqazgyy1
2021-07-14T17:06:38,627 Created temporary directory: /tmp/pip-req-tracker-ld6vbu1r
2021-07-14T17:06:38,628 Initialized build tracking at /tmp/pip-req-tracker-ld6vbu1r
2021-07-14T17:06:38,628 Created build tracker: /tmp/pip-req-tracker-ld6vbu1r
2021-07-14T17:06:38,628 Entered build tracker: /tmp/pip-req-tracker-ld6vbu1r
2021-07-14T17:06:38,629 Created temporary directory: /tmp/pip-wheel-jp_yy0eg
2021-07-14T17:06:38,658 1 location(s) to search for versions of teca:
2021-07-14T17:06:38,658 * https://pypi.org/simple/teca/
2021-07-14T17:06:38,658 Fetching project page and analyzing links: https://pypi.org/simple/teca/
2021-07-14T17:06:38,659 Getting page https://pypi.org/simple/teca/
2021-07-14T17:06:38,660 Found index url https://pypi.org/simple
2021-07-14T17:06:38,750   Found link https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 (from https://pypi.org/simple/teca/), version: 2.2.1
2021-07-14T17:06:38,751   Found link https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e (from https://pypi.org/simple/teca/), version: 2.2.2
2021-07-14T17:06:38,751   Found link https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b (from https://pypi.org/simple/teca/), version: 3.0.0
2021-07-14T17:06:38,751   Found link https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 (from https://pypi.org/simple/teca/), version: 4.0.0
2021-07-14T17:06:38,751   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/70/4b/3ecb17552872c808d9b3f16d428780dae6a6fbb1c3dfdf1fa7af11141f2c/teca-4.1.0-py3.9-linux-x86_64.egg#sha256=3cf2bc49c8b6feea1450fb17e9c9a4f23cce8cdcf16d12148c9e9ee753c12725 (from https://pypi.org/simple/teca/)
2021-07-14T17:06:38,752   Found link https://files.pythonhosted.org/packages/5f/83/21a8fdb68f6211299f8154270d1e8dbac541f1fde15c15dde0c7cb46e143/teca-4.1.0.tar.gz#sha256=170d8f9f8a38e196597c37c67882e85fdf19e53729cd3bbf27be65ac9d3132e8 (from https://pypi.org/simple/teca/), version: 4.1.0
2021-07-14T17:06:38,752 Skipping link: not a file: https://pypi.org/simple/teca/
2021-07-14T17:06:38,770 Given no hashes to check 1 links for project 'teca': discarding no candidates
2021-07-14T17:06:38,788 Collecting teca==2.2.2
2021-07-14T17:06:38,790   Created temporary directory: /tmp/pip-unpack-l0wiptmg
2021-07-14T17:06:40,680   Downloading teca-2.2.2.tar.gz (40.7 MB)
2021-07-14T17:06:46,712   Added teca==2.2.2 from https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e to build tracker '/tmp/pip-req-tracker-ld6vbu1r'
2021-07-14T17:06:46,713     Running setup.py (path:/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py) egg_info for package teca
2021-07-14T17:06:46,714     Created temporary directory: /tmp/pip-pip-egg-info-9vhk3u37
2021-07-14T17:06:46,714     Running command python setup.py egg_info
2021-07-14T17:06:47,826     running egg_info
2021-07-14T17:06:47,828     creating /tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info
2021-07-14T17:06:47,830     writing /tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/PKG-INFO
2021-07-14T17:06:47,832     writing dependency_links to /tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/dependency_links.txt
2021-07-14T17:06:47,834     writing requirements to /tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/requires.txt
2021-07-14T17:06:47,835     writing top-level names to /tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/top_level.txt
2021-07-14T17:06:47,837     writing manifest file '/tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/SOURCES.txt'
2021-07-14T17:06:47,845     reading manifest file '/tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/SOURCES.txt'
2021-07-14T17:06:47,846     reading manifest template 'MANIFEST.in'
2021-07-14T17:06:48,033     warning: no previously-included files matching '*.pdf' found anywhere in distribution
2021-07-14T17:06:48,034     warning: no previously-included files matching '*.sw?' found anywhere in distribution
2021-07-14T17:06:48,035     adding license file 'LICENSE.md'
2021-07-14T17:06:48,051     writing manifest file '/tmp/pip-pip-egg-info-9vhk3u37/teca.egg-info/SOURCES.txt'
2021-07-14T17:06:48,121   Source in /tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2 has version 2.2.2, which satisfies requirement teca==2.2.2 from https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e
2021-07-14T17:06:48,122   Removed teca==2.2.2 from https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e from build tracker '/tmp/pip-req-tracker-ld6vbu1r'
2021-07-14T17:06:48,126 Created temporary directory: /tmp/pip-unpack-glyvw6ly
2021-07-14T17:06:48,127 Building wheels for collected packages: teca
2021-07-14T17:06:48,131   Created temporary directory: /tmp/pip-wheel-es_dmebq
2021-07-14T17:06:48,131   Building wheel for teca (setup.py): started
2021-07-14T17:06:48,131   Destination directory: /tmp/pip-wheel-es_dmebq
2021-07-14T17:06:48,132   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-es_dmebq
2021-07-14T17:06:49,264   running bdist_wheel
2021-07-14T17:06:49,268   running build
2021-07-14T17:06:49,269   running build_ext
2021-07-14T17:06:49,659   -- The C compiler identification is GNU 10.2.1
2021-07-14T17:06:49,978   -- The CXX compiler identification is GNU 10.2.1
2021-07-14T17:06:50,360   -- The Fortran compiler identification is GNU 10.2.1
2021-07-14T17:06:50,451   -- Detecting C compiler ABI info
2021-07-14T17:06:50,857   -- Detecting C compiler ABI info - done
2021-07-14T17:06:50,913   -- Check for working C compiler: /usr/bin/cc - skipped
2021-07-14T17:06:50,914   -- Detecting C compile features
2021-07-14T17:06:50,916   -- Detecting C compile features - done
2021-07-14T17:06:50,937   -- Detecting CXX compiler ABI info
2021-07-14T17:06:51,384   -- Detecting CXX compiler ABI info - done
2021-07-14T17:06:51,442   -- Check for working CXX compiler: /usr/bin/c++ - skipped
2021-07-14T17:06:51,443   -- Detecting CXX compile features
2021-07-14T17:06:51,446   -- Detecting CXX compile features - done
2021-07-14T17:06:51,504   -- Detecting Fortran compiler ABI info
2021-07-14T17:06:51,980   -- Detecting Fortran compiler ABI info - done
2021-07-14T17:06:52,041   -- Check for working Fortran compiler: /usr/bin/gfortran - skipped
2021-07-14T17:06:52,041   -- Checking whether /usr/bin/gfortran supports Fortran 90
2021-07-14T17:06:52,521   -- Checking whether /usr/bin/gfortran supports Fortran 90 - yes
2021-07-14T17:06:52,528   -- Configuring a Release build
2021-07-14T17:06:52,528   -- Check for c++ regex support
2021-07-14T17:07:01,107   -- Check for c++ regex support -- enabled
2021-07-14T17:07:01,926   -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1")
2021-07-14T17:07:05,832   -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1")
2021-07-14T17:07:11,101   -- Found MPI_Fortran: /usr/lib/arm-linux-gnueabihf/libmpi_usempif08.so (found version "3.1")
2021-07-14T17:07:11,104   -- Found MPI: TRUE (found version "3.1")
2021-07-14T17:07:11,106   -- MPI features -- enabled
2021-07-14T17:07:11,130   -- Could NOT find NetCDF (missing: NETCDF_LIBRARIES NETCDF_INCLUDE_DIRS)
2021-07-14T17:07:11,131   CMake Error at CMakeLists.txt:112 (message):
2021-07-14T17:07:11,131     NetCDF features -- required but not found.  set NETCDF_DIR to enable.


2021-07-14T17:07:11,132   -- Configuring incomplete, errors occurred!
2021-07-14T17:07:11,133   See also "/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/build/temp.linux-armv7l-3.9/CMakeFiles/CMakeOutput.log".

2021-07-14T17:07:11,150   ================================================================
2021-07-14T17:07:11,150     An error ocured building TECA. This is usually a symptom
2021-07-14T17:07:11,151     of a missing dependency. The error messages above will indicate
2021-07-14T17:07:11,151     which package is missing. Install the development package for
2021-07-14T17:07:11,151     the missing dependency using your system's package manager
2021-07-14T17:07:11,151   ================================================================

2021-07-14T17:07:11,152   Traceback (most recent call last):
2021-07-14T17:07:11,152     File "<string>", line 1, in <module>
2021-07-14T17:07:11,152     File "/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py", line 100, in <module>
2021-07-14T17:07:11,152       setup(name='teca',
2021-07-14T17:07:11,152     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-07-14T17:07:11,153       return distutils.core.setup(**attrs)
2021-07-14T17:07:11,153     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-07-14T17:07:11,153       dist.run_commands()
2021-07-14T17:07:11,153     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-07-14T17:07:11,154       self.run_command(cmd)
2021-07-14T17:07:11,155     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-14T17:07:11,155       cmd_obj.run()
2021-07-14T17:07:11,156     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-07-14T17:07:11,156       self.run_command('build')
2021-07-14T17:07:11,156     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-14T17:07:11,157       self.distribution.run_command(command)
2021-07-14T17:07:11,157     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-14T17:07:11,158       cmd_obj.run()
2021-07-14T17:07:11,158     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-07-14T17:07:11,158       self.run_command(cmd_name)
2021-07-14T17:07:11,159     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-14T17:07:11,159       self.distribution.run_command(command)
2021-07-14T17:07:11,159     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-14T17:07:11,160       cmd_obj.run()
2021-07-14T17:07:11,160     File "/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py", line 34, in run
2021-07-14T17:07:11,160       self.build_extension(ext)
2021-07-14T17:07:11,161     File "/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py", line 75, in build_extension
2021-07-14T17:07:11,161       subprocess.check_call(['cmake', ext.sourcedir] + cmake_args, cwd=self.build_temp)
2021-07-14T17:07:11,161     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-07-14T17:07:11,162       raise CalledProcessError(retcode, cmd)
2021-07-14T17:07:11,162   subprocess.CalledProcessError: Command '['cmake', '/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2', '-DCMAKE_INSTALL_PREFIX=/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/build/lib.linux-armv7l-3.9/teca', '-DLIB_PREFIX=.', '-DREQUIRE_PYTHON=TRUE', '-DREQUIRE_MPI=TRUE', '-DREQUIRE_UDUNITS=TRUE', '-DREQUIRE_NETCDF=TRUE', '-DREQUIRE_BOOST=TRUE', '-DTECA_PYTHON_VERSION=3', '-DTECA_VERSION=2.2.2(PyPi)', '-DCMAKE_BUILD_TYPE=Release']' returned non-zero exit status 1.
2021-07-14T17:07:11,237   Building wheel for teca (setup.py): finished with status 'error'
2021-07-14T17:07:11,238   ERROR: Failed building wheel for teca
2021-07-14T17:07:11,239   Running setup.py clean for teca
2021-07-14T17:07:11,239   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jp_yy0eg/teca_da1e3b0e807742a1bf790e158616d5b2/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-14T17:07:12,416   running clean
2021-07-14T17:07:12,419   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-14T17:07:12,434   'build/lib.linux-armv7l-3.9' does not exist -- can't clean it
2021-07-14T17:07:12,434   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-14T17:07:12,435   'build/scripts-3.9' does not exist -- can't clean it
2021-07-14T17:07:12,435   removing 'build'
2021-07-14T17:07:12,505 Failed to build teca
2021-07-14T17:07:12,506 ERROR: Failed to build one or more wheels
2021-07-14T17:07:12,507 Exception information:
2021-07-14T17:07:12,507 Traceback (most recent call last):
2021-07-14T17:07:12,507   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-14T17:07:12,507     status = self.run(options, args)
2021-07-14T17:07:12,507   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-14T17:07:12,507     return func(self, options, args)
2021-07-14T17:07:12,507   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-14T17:07:12,507     raise CommandError(
2021-07-14T17:07:12,507 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-14T17:07:12,509 Removed build tracker: '/tmp/pip-req-tracker-ld6vbu1r'