2021-07-14T20:41:38,798 Created temporary directory: /tmp/pip-ephem-wheel-cache-7oyxrzsm
2021-07-14T20:41:38,801 Created temporary directory: /tmp/pip-req-tracker-669mscmx
2021-07-14T20:41:38,802 Initialized build tracking at /tmp/pip-req-tracker-669mscmx
2021-07-14T20:41:38,802 Created build tracker: /tmp/pip-req-tracker-669mscmx
2021-07-14T20:41:38,802 Entered build tracker: /tmp/pip-req-tracker-669mscmx
2021-07-14T20:41:38,803 Created temporary directory: /tmp/pip-wheel-mrytdqfn
2021-07-14T20:41:38,834 1 location(s) to search for versions of pygom:
2021-07-14T20:41:38,834 * https://pypi.org/simple/pygom/
2021-07-14T20:41:38,835 Fetching project page and analyzing links: https://pypi.org/simple/pygom/
2021-07-14T20:41:38,835 Getting page https://pypi.org/simple/pygom/
2021-07-14T20:41:38,836 Found index url https://pypi.org/simple
2021-07-14T20:41:39,023   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b6/64/9f5f0c582270f4fa6336ab727dc8ae04f4a450307b4159cee9a89cf41706/pygom-0.1.0-py2.7.egg#sha256=a57d8bfa86d68e33737b283d7ae8e211fc7294d446acc21f7889053162977208 (from https://pypi.org/simple/pygom/)
2021-07-14T20:41:39,023   Found link https://files.pythonhosted.org/packages/be/f0/4378974b05e34251b59a7c1ee48e871ab9e61ca804d6b7b84d2b3cd30ccd/pygom-0.1.0.tar.gz#sha256=10a973ac1aeac930fc8ea71507517b48eb9df79ce33d232fd73bfe3d477bc578 (from https://pypi.org/simple/pygom/), version: 0.1.0
2021-07-14T20:41:39,024   Found link https://files.pythonhosted.org/packages/3f/06/5c848ec61811d1cf4544ad492f45c63769bdbc53a898106ae2c7f944eaaf/pygom-0.1.1.tar.gz#sha256=d5eaf3d646b3a8be94580c6761d4a4eca308bfcb2d6de1272de1ed8031e714d8 (from https://pypi.org/simple/pygom/), version: 0.1.1
2021-07-14T20:41:39,024   Found link https://files.pythonhosted.org/packages/24/97/d708814dbc6a86450d134418696b9ef1ffd217abc33c71392df7fab9fe08/pygom-0.1.4.tar.gz#sha256=8bdb39a21332cbe45c63abe5a54a6905c8757201a5f7d4e94b7bf4cacfd9d760 (from https://pypi.org/simple/pygom/), version: 0.1.4
2021-07-14T20:41:39,024   Found link https://files.pythonhosted.org/packages/fa/dc/54b34416f5d21618e781f0fce562a4d85e7291b9e50b9f14c4e9f2d98126/pygom-0.1.5.tar.gz#sha256=6e2183691d9f876d986859287b928b41e6ba384e6bb79e69acc903616e55f082 (from https://pypi.org/simple/pygom/), version: 0.1.5
2021-07-14T20:41:39,025   Found link https://files.pythonhosted.org/packages/06/fe/c0f9fd7db36ef9296a40aa276b772aa5a47d73075ee046270d7c68bd9525/pygom-0.1.6.tar.gz#sha256=4cac2778e81d1f0931b2fe032dd864cf5364b605fbd2d799050d6cbd8efaa8db (from https://pypi.org/simple/pygom/), version: 0.1.6
2021-07-14T20:41:39,025   Found link https://files.pythonhosted.org/packages/a4/32/f5eb25fd1ee4e2fa2d4a71a9eeb152ec453a5f8610f1d2161382175c1471/pygom-0.1.7.tar.gz#sha256=34bb9d154cbb2770e135d918ebbbc8d8e22c44c54456e42c5642f0d2e98425c2 (from https://pypi.org/simple/pygom/), version: 0.1.7
2021-07-14T20:41:39,025 Skipping link: not a file: https://pypi.org/simple/pygom/
2021-07-14T20:41:39,044 Given no hashes to check 1 links for project 'pygom': discarding no candidates
2021-07-14T20:41:39,062 Collecting pygom==0.1.4
2021-07-14T20:41:39,064   Created temporary directory: /tmp/pip-unpack-4cqv6t3t
2021-07-14T20:41:39,405   Downloading pygom-0.1.4.tar.gz (426 kB)
2021-07-14T20:41:39,828   Added pygom==0.1.4 from https://files.pythonhosted.org/packages/24/97/d708814dbc6a86450d134418696b9ef1ffd217abc33c71392df7fab9fe08/pygom-0.1.4.tar.gz#sha256=8bdb39a21332cbe45c63abe5a54a6905c8757201a5f7d4e94b7bf4cacfd9d760 to build tracker '/tmp/pip-req-tracker-669mscmx'
2021-07-14T20:41:39,830     Running setup.py (path:/tmp/pip-wheel-mrytdqfn/pygom_e6208f2bb5b24aeca43ab793c388bef1/setup.py) egg_info for package pygom
2021-07-14T20:41:39,831     Created temporary directory: /tmp/pip-pip-egg-info-jkzw42mi
2021-07-14T20:41:39,831     Running command python setup.py egg_info
2021-07-14T20:41:47,633     running egg_info
2021-07-14T20:41:47,636     creating /tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info
2021-07-14T20:41:47,638     writing /tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/PKG-INFO
2021-07-14T20:41:47,641     writing dependency_links to /tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/dependency_links.txt
2021-07-14T20:41:47,643     writing requirements to /tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/requires.txt
2021-07-14T20:41:47,644     writing top-level names to /tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/top_level.txt
2021-07-14T20:41:47,646     writing manifest file '/tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/SOURCES.txt'
2021-07-14T20:41:47,986     reading manifest file '/tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/SOURCES.txt'
2021-07-14T20:41:47,989     reading manifest template 'MANIFEST.in'
2021-07-14T20:41:47,992     warning: no files found matching 'data/*.json'
2021-07-14T20:41:47,992     adding license file 'LICENSE.txt'
2021-07-14T20:41:47,996     writing manifest file '/tmp/pip-pip-egg-info-jkzw42mi/pygom.egg-info/SOURCES.txt'
2021-07-14T20:41:48,116   Source in /tmp/pip-wheel-mrytdqfn/pygom_e6208f2bb5b24aeca43ab793c388bef1 has version 0.1.4, which satisfies requirement pygom==0.1.4 from https://files.pythonhosted.org/packages/24/97/d708814dbc6a86450d134418696b9ef1ffd217abc33c71392df7fab9fe08/pygom-0.1.4.tar.gz#sha256=8bdb39a21332cbe45c63abe5a54a6905c8757201a5f7d4e94b7bf4cacfd9d760
2021-07-14T20:41:48,117   Removed pygom==0.1.4 from https://files.pythonhosted.org/packages/24/97/d708814dbc6a86450d134418696b9ef1ffd217abc33c71392df7fab9fe08/pygom-0.1.4.tar.gz#sha256=8bdb39a21332cbe45c63abe5a54a6905c8757201a5f7d4e94b7bf4cacfd9d760 from build tracker '/tmp/pip-req-tracker-669mscmx'
2021-07-14T20:41:48,121 Created temporary directory: /tmp/pip-unpack-xht5cwb6
2021-07-14T20:41:48,122 Building wheels for collected packages: pygom
2021-07-14T20:41:48,126   Created temporary directory: /tmp/pip-wheel-ml0p5kwh
2021-07-14T20:41:48,126   Building wheel for pygom (setup.py): started
2021-07-14T20:41:48,126   Destination directory: /tmp/pip-wheel-ml0p5kwh
2021-07-14T20:41:48,127   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-mrytdqfn/pygom_e6208f2bb5b24aeca43ab793c388bef1/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-mrytdqfn/pygom_e6208f2bb5b24aeca43ab793c388bef1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ml0p5kwh
2021-07-14T20:41:50,407   running bdist_wheel
2021-07-14T20:41:50,414   running build
2021-07-14T20:41:50,414   running build_py
2021-07-14T20:41:50,572   creating build
2021-07-14T20:41:50,573   creating build/lib.linux-armv7l-3.9
2021-07-14T20:41:50,574   creating build/lib.linux-armv7l-3.9/pygom
2021-07-14T20:41:50,575   copying pygom/__init__.py -> build/lib.linux-armv7l-3.9/pygom
2021-07-14T20:41:50,578   creating build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,579   copying pygom/model/simulate.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,582   copying pygom/model/ode_variable.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,584   copying pygom/model/_model_errors.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,586   copying pygom/model/__init__.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,589   copying pygom/model/_model_verification.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,591   copying pygom/model/deterministic.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,595   copying pygom/model/epi_analysis.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,597   copying pygom/model/common_models.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,600   copying pygom/model/transition.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,603   copying pygom/model/stochastic_simulation.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,607   copying pygom/model/_ode_composition.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,609   copying pygom/model/base_ode_model.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,614   creating build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-14T20:41:50,615   copying pygom/model/ode_utils/checks_and_conversions.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-14T20:41:50,618   copying pygom/model/ode_utils/__init__.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-14T20:41:50,621   copying pygom/model/ode_utils/compile_canary.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-14T20:41:50,624   copying pygom/model/ode_utils/plot_stoc.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-14T20:41:50,626   copying pygom/model/ode_utils/plot_det.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-14T20:41:50,630   creating build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,631   copying pygom/loss/loss_type.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,634   copying pygom/loss/__init__.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,636   copying pygom/loss/base_loss.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,641   copying pygom/loss/epijson_loss.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,643   copying pygom/loss/ode_loss.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,645   copying pygom/loss/get_init.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,648   copying pygom/loss/read_epijson.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,650   copying pygom/loss/confidence_interval.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,654   creating build/lib.linux-armv7l-3.9/pygom/utilR
2021-07-14T20:41:50,655   copying pygom/utilR/__init__.py -> build/lib.linux-armv7l-3.9/pygom/utilR
2021-07-14T20:41:50,657   copying pygom/utilR/distn.py -> build/lib.linux-armv7l-3.9/pygom/utilR
2021-07-14T20:41:50,659   running egg_info
2021-07-14T20:41:50,663   writing pygom.egg-info/PKG-INFO
2021-07-14T20:41:50,666   writing dependency_links to pygom.egg-info/dependency_links.txt
2021-07-14T20:41:50,668   writing requirements to pygom.egg-info/requires.txt
2021-07-14T20:41:50,669   writing top-level names to pygom.egg-info/top_level.txt
2021-07-14T20:41:50,713   reading manifest file 'pygom.egg-info/SOURCES.txt'
2021-07-14T20:41:50,734   reading manifest template 'MANIFEST.in'
2021-07-14T20:41:50,735   warning: no files found matching 'data/*.json'
2021-07-14T20:41:50,736   adding license file 'LICENSE.txt'
2021-07-14T20:41:50,744   writing manifest file 'pygom.egg-info/SOURCES.txt'
2021-07-14T20:41:50,750   creating build/lib.linux-armv7l-3.9/pygom/data
2021-07-14T20:41:50,751   copying pygom/data/eg1.json -> build/lib.linux-armv7l-3.9/pygom/data
2021-07-14T20:41:50,753   copying pygom/model/_tau_leap.c -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,789   copying pygom/model/_tau_leap.pyx -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,796   copying pygom/loss/.gitignore -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-14T20:41:50,803   running build_ext
2021-07-14T20:41:50,911   skipping 'pygom/model/_tau_leap.c' Cython extension (up-to-date)
2021-07-14T20:41:50,912   building 'pygom.model._tau_leap' extension
2021-07-14T20:41:50,913   creating build/temp.linux-armv7l-3.9
2021-07-14T20:41:50,914   creating build/temp.linux-armv7l-3.9/pygom
2021-07-14T20:41:50,916   creating build/temp.linux-armv7l-3.9/pygom/model
2021-07-14T20:41:50,917   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pygom/model/_tau_leap.c -o build/temp.linux-armv7l-3.9/pygom/model/_tau_leap.o
2021-07-14T20:41:52,014   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-14T20:41:52,014                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-14T20:41:52,014                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-14T20:41:52,014                    from pygom/model/_tau_leap.c:598:
2021-07-14T20:41:52,015   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-14T20:41:52,015      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-14T20:41:52,015         |  ^~~~~~~
2021-07-14T20:41:52,491   pygom/model/_tau_leap.c: In function ‘__Pyx_ParseOptionalKeywords’:
2021-07-14T20:41:52,504   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,505   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,505         |                     ^
2021-07-14T20:41:52,506   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,506                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,506                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,506   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,506     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,506         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,522   pygom/model/_tau_leap.c:20221:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,522   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,523         |                     ^
2021-07-14T20:41:52,523   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,523                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,523                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,523   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T20:41:52,523     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T20:41:52,523         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,539   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,540   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,540         |                     ^
2021-07-14T20:41:52,540   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,540                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,540                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,540   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,541     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,541         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,557   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,557   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,557         |                     ^
2021-07-14T20:41:52,557   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,557                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,557                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,558   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,558     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,558         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,574   pygom/model/_tau_leap.c:20221:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,574   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,574         |                     ^
2021-07-14T20:41:52,574   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,575                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,575                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,575   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T20:41:52,575     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T20:41:52,575         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,591   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,591   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,591         |                     ^
2021-07-14T20:41:52,592   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,592                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,592                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,592   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,592     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,592         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,611   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,611   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,612         |                         ^
2021-07-14T20:41:52,612   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,612                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,612                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,612   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,612     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,612         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,628   pygom/model/_tau_leap.c:20237:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,629   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,629         |                         ^
2021-07-14T20:41:52,629   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,629                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,629                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,629   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T20:41:52,629     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T20:41:52,630         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,647   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,647   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,647         |                         ^
2021-07-14T20:41:52,647   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,647                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,647                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,648   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,648     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,648         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,666   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,666   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,666         |                         ^
2021-07-14T20:41:52,666   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,666                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,667                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,667   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,667     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,667         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,682   pygom/model/_tau_leap.c:20237:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,682   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,682         |                         ^
2021-07-14T20:41:52,682   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,682                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,682                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,682   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-14T20:41:52,683     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-14T20:41:52,683         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:52,697   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:52,698   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-14T20:41:52,698         |                         ^
2021-07-14T20:41:52,698   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:52,698                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:52,698                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:52,698   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-14T20:41:52,698     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-14T20:41:52,698         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:41:53,044   pygom/model/_tau_leap.c: In function ‘__Pyx_decode_c_string’:
2021-07-14T20:41:53,058   pygom/model/_tau_leap.c:21943:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-14T20:41:53,058   21943 |         return PyUnicode_FromUnicode(NULL, 0);
2021-07-14T20:41:53,058         |         ^~~~~~
2021-07-14T20:41:53,058   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-14T20:41:53,058                    from /usr/include/python3.9/Python.h:97,
2021-07-14T20:41:53,059                    from pygom/model/_tau_leap.c:4:
2021-07-14T20:41:53,059   /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here
2021-07-14T20:41:53,059     551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode(
2021-07-14T20:41:53,059         |                                          ^~~~~~~~~~~~~~~~~~~~~
2021-07-14T20:42:01,573   pygom/model/_tau_leap.c: In function ‘__pyx_pf_5pygom_5model_9_tau_leap__cy_test_tau_leap_safety.constprop’:
2021-07-14T20:42:01,575   pygom/model/_tau_leap.c:2883:12: warning: ‘__pyx_v_new_cdf’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2021-07-14T20:42:01,575    2883 |         if (__pyx_t_5) {
2021-07-14T20:42:01,575         |            ^
2021-07-14T20:42:05,352   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pygom/model/_tau_leap.o -o build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.cpython-39-arm-linux-gnueabihf.so
2021-07-14T20:42:05,587   installing to build/bdist.linux-armv7l/wheel
2021-07-14T20:42:05,588   running install
2021-07-14T20:42:05,590   running install_lib
2021-07-14T20:42:05,597   creating build/bdist.linux-armv7l
2021-07-14T20:42:05,598   creating build/bdist.linux-armv7l/wheel
2021-07-14T20:42:05,600   creating build/bdist.linux-armv7l/wheel/pygom
2021-07-14T20:42:05,602   creating build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,604   copying build/lib.linux-armv7l-3.9/pygom/model/simulate.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,607   copying build/lib.linux-armv7l-3.9/pygom/model/ode_variable.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,610   copying build/lib.linux-armv7l-3.9/pygom/model/_model_errors.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,612   copying build/lib.linux-armv7l-3.9/pygom/model/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,615   copying build/lib.linux-armv7l-3.9/pygom/model/_model_verification.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,618   copying build/lib.linux-armv7l-3.9/pygom/model/deterministic.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,623   copying build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.pyx -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,626   copying build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.c -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,653   copying build/lib.linux-armv7l-3.9/pygom/model/epi_analysis.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,656   creating build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-14T20:42:05,657   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/checks_and_conversions.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-14T20:42:05,659   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-14T20:42:05,662   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/compile_canary.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-14T20:42:05,664   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/plot_stoc.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-14T20:42:05,667   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/plot_det.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-14T20:42:05,669   copying build/lib.linux-armv7l-3.9/pygom/model/common_models.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,672   copying build/lib.linux-armv7l-3.9/pygom/model/transition.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,674   copying build/lib.linux-armv7l-3.9/pygom/model/stochastic_simulation.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,678   copying build/lib.linux-armv7l-3.9/pygom/model/_ode_composition.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,681   copying build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,704   copying build/lib.linux-armv7l-3.9/pygom/model/base_ode_model.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-14T20:42:05,708   copying build/lib.linux-armv7l-3.9/pygom/__init__.py -> build/bdist.linux-armv7l/wheel/pygom
2021-07-14T20:42:05,711   creating build/bdist.linux-armv7l/wheel/pygom/data
2021-07-14T20:42:05,711   copying build/lib.linux-armv7l-3.9/pygom/data/eg1.json -> build/bdist.linux-armv7l/wheel/pygom/data
2021-07-14T20:42:05,715   creating build/bdist.linux-armv7l/wheel/pygom/utilR
2021-07-14T20:42:05,716   copying build/lib.linux-armv7l-3.9/pygom/utilR/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/utilR
2021-07-14T20:42:05,718   copying build/lib.linux-armv7l-3.9/pygom/utilR/distn.py -> build/bdist.linux-armv7l/wheel/pygom/utilR
2021-07-14T20:42:05,722   creating build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,723   copying build/lib.linux-armv7l-3.9/pygom/loss/loss_type.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,726   copying build/lib.linux-armv7l-3.9/pygom/loss/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,728   copying build/lib.linux-armv7l-3.9/pygom/loss/base_loss.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,732   copying build/lib.linux-armv7l-3.9/pygom/loss/epijson_loss.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,734   copying build/lib.linux-armv7l-3.9/pygom/loss/ode_loss.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,736   copying build/lib.linux-armv7l-3.9/pygom/loss/get_init.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,739   copying build/lib.linux-armv7l-3.9/pygom/loss/read_epijson.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,742   copying build/lib.linux-armv7l-3.9/pygom/loss/.gitignore -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,744   copying build/lib.linux-armv7l-3.9/pygom/loss/confidence_interval.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-14T20:42:05,747   running install_egg_info
2021-07-14T20:42:05,756   Copying pygom.egg-info to build/bdist.linux-armv7l/wheel/pygom-0.1.4-py3.9.egg-info
2021-07-14T20:42:05,771   running install_scripts
2021-07-14T20:42:05,865   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2021-07-14T20:42:05,871   creating build/bdist.linux-armv7l/wheel/pygom-0.1.4.dist-info/WHEEL
2021-07-14T20:42:05,874   creating '/tmp/pip-wheel-ml0p5kwh/pygom-0.1.4-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-14T20:42:05,877   adding 'pygom/__init__.py'
2021-07-14T20:42:05,879   adding 'pygom/data/eg1.json'
2021-07-14T20:42:05,881   adding 'pygom/loss/.gitignore'
2021-07-14T20:42:05,882   adding 'pygom/loss/__init__.py'
2021-07-14T20:42:05,890   adding 'pygom/loss/base_loss.py'
2021-07-14T20:42:05,894   adding 'pygom/loss/confidence_interval.py'
2021-07-14T20:42:05,895   adding 'pygom/loss/epijson_loss.py'
2021-07-14T20:42:05,898   adding 'pygom/loss/get_init.py'
2021-07-14T20:42:05,899   adding 'pygom/loss/loss_type.py'
2021-07-14T20:42:05,901   adding 'pygom/loss/ode_loss.py'
2021-07-14T20:42:05,902   adding 'pygom/loss/read_epijson.py'
2021-07-14T20:42:05,904   adding 'pygom/model/__init__.py'
2021-07-14T20:42:05,906   adding 'pygom/model/_model_errors.py'
2021-07-14T20:42:05,907   adding 'pygom/model/_model_verification.py'
2021-07-14T20:42:05,910   adding 'pygom/model/_ode_composition.py'
2021-07-14T20:42:05,988   adding 'pygom/model/_tau_leap.c'
2021-07-14T20:42:06,171   adding 'pygom/model/_tau_leap.cpython-39-arm-linux-gnueabihf.so'
2021-07-14T20:42:06,179   adding 'pygom/model/_tau_leap.pyx'
2021-07-14T20:42:06,184   adding 'pygom/model/base_ode_model.py'
2021-07-14T20:42:06,187   adding 'pygom/model/common_models.py'
2021-07-14T20:42:06,195   adding 'pygom/model/deterministic.py'
2021-07-14T20:42:06,197   adding 'pygom/model/epi_analysis.py'
2021-07-14T20:42:06,198   adding 'pygom/model/ode_variable.py'
2021-07-14T20:42:06,202   adding 'pygom/model/simulate.py'
2021-07-14T20:42:06,205   adding 'pygom/model/stochastic_simulation.py'
2021-07-14T20:42:06,207   adding 'pygom/model/transition.py'
2021-07-14T20:42:06,211   adding 'pygom/model/ode_utils/__init__.py'
2021-07-14T20:42:06,213   adding 'pygom/model/ode_utils/checks_and_conversions.py'
2021-07-14T20:42:06,214   adding 'pygom/model/ode_utils/compile_canary.py'
2021-07-14T20:42:06,216   adding 'pygom/model/ode_utils/plot_det.py'
2021-07-14T20:42:06,217   adding 'pygom/model/ode_utils/plot_stoc.py'
2021-07-14T20:42:06,219   adding 'pygom/utilR/__init__.py'
2021-07-14T20:42:06,221   adding 'pygom/utilR/distn.py'
2021-07-14T20:42:06,225   adding 'pygom-0.1.4.dist-info/LICENSE.txt'
2021-07-14T20:42:06,227   adding 'pygom-0.1.4.dist-info/METADATA'
2021-07-14T20:42:06,228   adding 'pygom-0.1.4.dist-info/WHEEL'
2021-07-14T20:42:06,228   adding 'pygom-0.1.4.dist-info/top_level.txt'
2021-07-14T20:42:06,230   adding 'pygom-0.1.4.dist-info/RECORD'
2021-07-14T20:42:06,241   removing build/bdist.linux-armv7l/wheel
2021-07-14T20:42:06,388   Building wheel for pygom (setup.py): finished with status 'done'
2021-07-14T20:42:06,397   Created wheel for pygom: filename=pygom-0.1.4-cp39-cp39-linux_armv7l.whl size=534240 sha256=d05d6e14ddeb5dcaac869348625e946c2a065b2c3b43822efb4585958dd0f88d
2021-07-14T20:42:06,397   Stored in directory: /tmp/pip-ephem-wheel-cache-7oyxrzsm/wheels/b8/be/65/4a100b9790e0d2a5aeeb70fcdc6ddb23c2aa22b49a99737c5c
2021-07-14T20:42:06,408 Successfully built pygom
2021-07-14T20:42:06,428 Removed build tracker: '/tmp/pip-req-tracker-669mscmx'