2021-07-15T01:38:57,232 Created temporary directory: /tmp/pip-ephem-wheel-cache-mcjuoyi2 2021-07-15T01:38:57,235 Created temporary directory: /tmp/pip-req-tracker-cr1t0645 2021-07-15T01:38:57,236 Initialized build tracking at /tmp/pip-req-tracker-cr1t0645 2021-07-15T01:38:57,236 Created build tracker: /tmp/pip-req-tracker-cr1t0645 2021-07-15T01:38:57,237 Entered build tracker: /tmp/pip-req-tracker-cr1t0645 2021-07-15T01:38:57,238 Created temporary directory: /tmp/pip-wheel-i3p_d_rq 2021-07-15T01:38:57,273 1 location(s) to search for versions of amlearn: 2021-07-15T01:38:57,273 * https://pypi.org/simple/amlearn/ 2021-07-15T01:38:57,273 Fetching project page and analyzing links: https://pypi.org/simple/amlearn/ 2021-07-15T01:38:57,274 Getting page https://pypi.org/simple/amlearn/ 2021-07-15T01:38:57,276 Found index url https://pypi.org/simple 2021-07-15T01:38:57,389 Found link https://files.pythonhosted.org/packages/5b/37/b16f0e09d837e63766331f1e212eccd32b46da07fa38269be86c0908c613/amlearn-0.0.1rc1.tar.gz#sha256=3feb0259f07d515171eb3f5dbcd60a40a90a2c04b9114be537d617d1df4addee (from https://pypi.org/simple/amlearn/), version: 0.0.1rc1 2021-07-15T01:38:57,390 Found link https://files.pythonhosted.org/packages/c9/69/69f3bd8acf04b6af467a52a212de838bf9cc412724b0197b1523b8703808/amlearn-0.1.0.tar.gz#sha256=20a099bc7da2324c247c1f5bd4c61cbf207ad59248a0c161fac0a08d11112f36 (from https://pypi.org/simple/amlearn/), version: 0.1.0 2021-07-15T01:38:57,391 Found link https://files.pythonhosted.org/packages/d8/26/d78c59d9be85d65e5fae532c317c98f8dc8184831f66a0ae50fc6099e23d/amlearn-0.2.0.tar.gz#sha256=02a6393944cbf8a784db0d554708f37a035c9203518531e46e870bc1453cef7f (from https://pypi.org/simple/amlearn/), version: 0.2.0 2021-07-15T01:38:57,391 Found link https://files.pythonhosted.org/packages/bb/91/5d7bc08da68c418d6a61ba40238d065acafeff63ecd5c802d6bff7790aba/amlearn-0.2.1.tar.gz#sha256=036b1f5f9152145124dc681a3345d518f374c1a8785f602addf4bc27494917f3 (from https://pypi.org/simple/amlearn/), version: 0.2.1 2021-07-15T01:38:57,392 Found link https://files.pythonhosted.org/packages/55/df/26e461638a88a71b48f07abfe48d5bd2e5c20bb3cf3967a8d2e18385a460/amlearn-0.2.2.tar.gz#sha256=1ad6512e2146f4e145e097463f4575427820335c59fca3e6bfb41806c786799d (from https://pypi.org/simple/amlearn/), version: 0.2.2 2021-07-15T01:38:57,392 Found link https://files.pythonhosted.org/packages/80/8b/f29ae904d859e804eb774dd137d0ca7a549737754751446cca2973d301da/amlearn-0.2.3.tar.gz#sha256=5d1ffea09b0267bdfef9ce1d7fcb8340ca8ece762a08885f8aa3be17281aa2b5 (from https://pypi.org/simple/amlearn/), version: 0.2.3 2021-07-15T01:38:57,393 Found link https://files.pythonhosted.org/packages/6f/95/4f17c41fa8c92431ceecc63417552a0cacd918f6fd486fecd5da7c150624/amlearn-0.2.4.tar.gz#sha256=22907a9b4dd8df1858b2336d5b5a163fba110e8ef9d2eb28bba7b28c5133fee2 (from https://pypi.org/simple/amlearn/), version: 0.2.4 2021-07-15T01:38:57,393 Found link https://files.pythonhosted.org/packages/34/b3/b65030f870412ef8adb550da9e3e58e794b61ba08d7bf61920f8448e9a06/amlearn-0.2.5.tar.gz#sha256=da9d07b7f81cc8aa7114bb9fc490c58fefd304dec5478a29816104b8cc3c7e6c (from https://pypi.org/simple/amlearn/), version: 0.2.5 2021-07-15T01:38:57,394 Found link https://files.pythonhosted.org/packages/a5/48/c9242309cea218dd4cccf08cf25320987703b250691f37dc69b5078e0069/amlearn-0.2.6.tar.gz#sha256=e99afe2a58a6f749d7fdce86fb760b9e73911e2966ab5f52d3d6f42fadf887ba (from https://pypi.org/simple/amlearn/), version: 0.2.6 2021-07-15T01:38:57,394 Found link https://files.pythonhosted.org/packages/9b/3a/482db82334f7cef1d3d61de69919813a75396692267a1d277378fff90b15/amlearn-0.3.1.tar.gz#sha256=c0fa0da13a6313d767f9f752ccdad3ab97fe4adba1ad74a7f1a138093796d1a2 (from https://pypi.org/simple/amlearn/), version: 0.3.1 2021-07-15T01:38:57,395 Found link https://files.pythonhosted.org/packages/72/50/8891e4d0dc140c1e7b362e8045c01b8e86415bcb951e701e974776f4dc94/amlearn-0.3.2.tar.gz#sha256=752577af6877785f9b335816d6f6f4b08dcd9755c4170b619bb10d9666304a7e (from https://pypi.org/simple/amlearn/), version: 0.3.2 2021-07-15T01:38:57,395 Found link https://files.pythonhosted.org/packages/e2/26/2df8cbc6aa583a9f7196ebe4bf76b969260a39c0dd91cd1961b67d0ae984/amlearn-0.3.3.tar.gz#sha256=f180e4f9cbcc0839eea4c86823b319ffd4e793b63997712fe99c9f163ca94e9d (from https://pypi.org/simple/amlearn/), version: 0.3.3 2021-07-15T01:38:57,396 Found link https://files.pythonhosted.org/packages/80/95/ed6fd2b47ba6b38590fa63a50fbdd07945f8d234c4e32f2f0a3558fd27b9/amlearn-0.3.4.tar.gz#sha256=35b993401f1b75cf97104aec6aca3f1c5d2d89dc7a991d18d2f60412f36ca428 (from https://pypi.org/simple/amlearn/), version: 0.3.4 2021-07-15T01:38:57,396 Skipping link: not a file: https://pypi.org/simple/amlearn/ 2021-07-15T01:38:57,422 Given no hashes to check 1 links for project 'amlearn': discarding no candidates 2021-07-15T01:38:57,447 Collecting amlearn==0.2.0 2021-07-15T01:38:57,449 Created temporary directory: /tmp/pip-unpack-f2aef5c2 2021-07-15T01:38:57,690 Downloading amlearn-0.2.0.tar.gz (82 kB) 2021-07-15T01:38:57,893 Added amlearn==0.2.0 from https://files.pythonhosted.org/packages/d8/26/d78c59d9be85d65e5fae532c317c98f8dc8184831f66a0ae50fc6099e23d/amlearn-0.2.0.tar.gz#sha256=02a6393944cbf8a784db0d554708f37a035c9203518531e46e870bc1453cef7f to build tracker '/tmp/pip-req-tracker-cr1t0645' 2021-07-15T01:38:57,895 Running setup.py (path:/tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636/setup.py) egg_info for package amlearn 2021-07-15T01:38:57,895 Created temporary directory: /tmp/pip-pip-egg-info-ihyoenm0 2021-07-15T01:38:57,896 Running command python setup.py egg_info 2021-07-15T01:38:59,579 running egg_info 2021-07-15T01:38:59,581 running build_src 2021-07-15T01:38:59,583 build_src 2021-07-15T01:38:59,584 building extension "amlearn.featurize.src.utils" sources 2021-07-15T01:38:59,584 f2py options: [] 2021-07-15T01:38:59,584 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c 2021-07-15T01:38:59,585 creating build 2021-07-15T01:38:59,585 creating build/src.linux-armv7l-3.9 2021-07-15T01:38:59,585 creating build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:38:59,586 creating build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:38:59,586 creating build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:38:59,791 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:38:59,792 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:38:59,793 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:38:59,793 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:38:59,837 appenddecl: "dimension" not implemented. 2021-07-15T01:38:59,850 appenddecl: "dimension" not implemented. 2021-07-15T01:38:59,854 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:38:59,856 appenddecl: "dimension" not implemented. 2021-07-15T01:39:00,079 Reading fortran codes... 2021-07-15T01:39:00,080 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:00,080 Post-processing... 2021-07-15T01:39:00,080 Block: utils 2021-07-15T01:39:00,080 Block: determinant_func 2021-07-15T01:39:00,081 Block: determinant 2021-07-15T01:39:00,081 Block: distance 2021-07-15T01:39:00,081 Block: distance_info 2021-07-15T01:39:00,082 Block: quicksort 2021-07-15T01:39:00,082 Block: quick_sort 2021-07-15T01:39:00,082 Block: cg_function 2021-07-15T01:39:00,082 Block: calculate_cg 2021-07-15T01:39:00,083 Block: angle 2021-07-15T01:39:00,083 Block: angle_info 2021-07-15T01:39:00,083 Block: c_stats 2021-07-15T01:39:00,083 Block: customize_stats 2021-07-15T01:39:00,084 Block: a_stats 2021-07-15T01:39:00,084 Block: all_stats 2021-07-15T01:39:00,084 Post-processing (stage 2)... 2021-07-15T01:39:00,085 Block: utils 2021-07-15T01:39:00,086 Block: unknown_interface 2021-07-15T01:39:00,086 Block: determinant_func 2021-07-15T01:39:00,087 Block: determinant 2021-07-15T01:39:00,087 Block: distance 2021-07-15T01:39:00,087 Block: distance_info 2021-07-15T01:39:00,088 Block: quicksort 2021-07-15T01:39:00,088 Block: quick_sort 2021-07-15T01:39:00,089 Block: cg_function 2021-07-15T01:39:00,089 Block: calculate_cg 2021-07-15T01:39:00,089 Block: angle 2021-07-15T01:39:00,090 Block: angle_info 2021-07-15T01:39:00,090 Block: c_stats 2021-07-15T01:39:00,090 Block: customize_stats 2021-07-15T01:39:00,090 Block: a_stats 2021-07-15T01:39:00,091 Block: all_stats 2021-07-15T01:39:00,091 Building modules... 2021-07-15T01:39:00,091 Building module "utils"... 2021-07-15T01:39:00,091 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:00,092 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:00,092 deter_value = determinant(matrix) 2021-07-15T01:39:00,092 Constructing F90 module support for "distance"... 2021-07-15T01:39:00,092 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:00,093 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:00,093 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:00,093 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:00,093 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:00,093 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:00,094 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:00,094 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:00,094 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:00,094 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:00,094 Constructing F90 module support for "angle"... 2021-07-15T01:39:00,095 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:00,095 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:00,095 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:00,095 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:00,095 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:00,096 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:00,096 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:00,096 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:00,096 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:00,096 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:00,097 Wrote C/API module "utils" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c" 2021-07-15T01:39:00,097 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/utils-f2pywrappers2.f90" 2021-07-15T01:39:00,097 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:00,097 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:00,097 creating build/src.linux-armv7l-3.9/build 2021-07-15T01:39:00,098 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-15T01:39:00,098 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:39:00,098 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:00,098 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:00,098 copying /home/piwheels/.local/lib/python3.9/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:00,099 copying /home/piwheels/.local/lib/python3.9/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:00,099 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/utils-f2pywrappers2.f90' to sources. 2021-07-15T01:39:00,099 building extension "amlearn.featurize.src.voronoi_nn" sources 2021-07-15T01:39:00,099 f2py options: [] 2021-07-15T01:39:00,100 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nnmodule.c 2021-07-15T01:39:00,295 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:00,296 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:00,297 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:00,298 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:00,353 appenddecl: "dimension" not implemented. 2021-07-15T01:39:00,360 appenddecl: "dimension" not implemented. 2021-07-15T01:39:00,363 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:00,364 appenddecl: "dimension" not implemented. 2021-07-15T01:39:00,684 Reading fortran codes... 2021-07-15T01:39:00,684 Reading file 'amlearn/featurize/src/voronoi_nn.f90' (format:free) 2021-07-15T01:39:00,684 {'before': '', 'this': 'use', 'after': ':: distance '} 2021-07-15T01:39:00,684 Line #49 in amlearn/featurize/src/voronoi_nn.f90:" use :: distance " 2021-07-15T01:39:00,685 analyzeline: Could not crack the use statement. 2021-07-15T01:39:00,685 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:00,685 Post-processing... 2021-07-15T01:39:00,685 Block: voronoi_nn 2021-07-15T01:39:00,686 Block: determinant 2021-07-15T01:39:00,686 Block: voronoi 2021-07-15T01:39:00,686 Block: determinant_func 2021-07-15T01:39:00,686 Block: determinant 2021-07-15T01:39:00,686 Block: distance 2021-07-15T01:39:00,687 Block: distance_info 2021-07-15T01:39:00,687 Block: quicksort 2021-07-15T01:39:00,687 Block: quick_sort 2021-07-15T01:39:00,687 Block: cg_function 2021-07-15T01:39:00,688 Block: calculate_cg 2021-07-15T01:39:00,688 Block: angle 2021-07-15T01:39:00,688 Block: angle_info 2021-07-15T01:39:00,688 Block: c_stats 2021-07-15T01:39:00,688 Block: customize_stats 2021-07-15T01:39:00,688 Block: a_stats 2021-07-15T01:39:00,689 Block: all_stats 2021-07-15T01:39:00,689 Post-processing (stage 2)... 2021-07-15T01:39:00,689 Block: voronoi_nn 2021-07-15T01:39:00,690 Block: unknown_interface 2021-07-15T01:39:00,690 Block: determinant 2021-07-15T01:39:00,690 Block: voronoi 2021-07-15T01:39:00,690 Block: determinant_func 2021-07-15T01:39:00,690 Block: determinant 2021-07-15T01:39:00,691 Block: distance 2021-07-15T01:39:00,691 Block: distance_info 2021-07-15T01:39:00,691 Block: quicksort 2021-07-15T01:39:00,691 Block: quick_sort 2021-07-15T01:39:00,692 Block: cg_function 2021-07-15T01:39:00,692 Block: calculate_cg 2021-07-15T01:39:00,692 Block: angle 2021-07-15T01:39:00,692 Block: angle_info 2021-07-15T01:39:00,692 Block: c_stats 2021-07-15T01:39:00,692 Block: customize_stats 2021-07-15T01:39:00,693 Block: a_stats 2021-07-15T01:39:00,693 Block: all_stats 2021-07-15T01:39:00,693 Building modules... 2021-07-15T01:39:00,693 Building module "voronoi_nn"... 2021-07-15T01:39:00,693 Constructing wrapper function "determinant"... 2021-07-15T01:39:00,693 deter_value = determinant(face) 2021-07-15T01:39:00,694 Constructing wrapper function "voronoi"... 2021-07-15T01:39:00,694 n_neighbor_list,neighbor_lists,neighbor_area_lists,neighbor_vol_lists,neighbor_distance_lists,neighbor_edge_lists,n_neighbor_max,n_edge_max = voronoi(atom_type,atom_coords,cutoff,allow_neighbor_limit,small_face_thres,pbc,bds,n_neighbor_list,neighbor_lists,neighbor_area_lists,neighbor_vol_lists,neighbor_distance_lists,neighbor_edge_lists,n_neighbor_max,n_edge_max,[n_atoms,n_neighbor_limit]) 2021-07-15T01:39:00,694 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:00,694 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:00,695 deter_value = determinant(matrix) 2021-07-15T01:39:00,695 Constructing F90 module support for "distance"... 2021-07-15T01:39:00,695 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:00,695 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:00,696 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:00,696 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:00,696 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:00,696 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:00,696 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:00,697 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:00,697 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:00,697 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:00,697 Constructing F90 module support for "angle"... 2021-07-15T01:39:00,697 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:00,698 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:00,698 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:00,698 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:00,698 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:00,698 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:00,699 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:00,699 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:00,699 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:00,699 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:00,700 Wrote C/API module "voronoi_nn" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nnmodule.c" 2021-07-15T01:39:00,700 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nn-f2pywrappers2.f90" 2021-07-15T01:39:00,700 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:00,700 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:00,700 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:39:00,701 building extension "amlearn.featurize.src.voronoi_stats" sources 2021-07-15T01:39:00,701 f2py options: [] 2021-07-15T01:39:00,701 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_statsmodule.c 2021-07-15T01:39:00,915 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:00,916 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:00,917 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:00,917 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:00,963 sortvarnames: failed to compute dependencies because of cyclic dependencies between target_voro_idx, voronoi_index_list, motif_one_hot, n_voro, n_target, n_atoms 2021-07-15T01:39:01,035 appenddecl: "dimension" not implemented. 2021-07-15T01:39:01,050 appenddecl: "dimension" not implemented. 2021-07-15T01:39:01,055 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:01,056 appenddecl: "dimension" not implemented. 2021-07-15T01:39:01,840 Reading fortran codes... 2021-07-15T01:39:01,840 Reading file 'amlearn/featurize/src/voronoi_stats.f90' (format:free) 2021-07-15T01:39:01,840 {'before': '', 'this': 'use', 'after': ':: a_stats, only: all_stats '} 2021-07-15T01:39:01,840 Line #205 in amlearn/featurize/src/voronoi_stats.f90:" use :: a_stats, only: all_stats " 2021-07-15T01:39:01,841 analyzeline: Could not crack the use statement. 2021-07-15T01:39:01,841 {'before': '', 'this': 'use', 'after': ':: a_stats, only: all_stats '} 2021-07-15T01:39:01,841 Line #230 in amlearn/featurize/src/voronoi_stats.f90:" use :: a_stats, only: all_stats " 2021-07-15T01:39:01,841 analyzeline: Could not crack the use statement. 2021-07-15T01:39:01,841 {'before': '', 'this': 'use', 'after': ':: a_stats, only : all_stats '} 2021-07-15T01:39:01,841 Line #318 in amlearn/featurize/src/voronoi_stats.f90:" use :: a_stats, only : all_stats " 2021-07-15T01:39:01,842 analyzeline: Could not crack the use statement. 2021-07-15T01:39:01,842 {'before': '', 'this': 'use', 'after': ':: c_stats, only : customize_stats '} 2021-07-15T01:39:01,842 Line #320 in amlearn/featurize/src/voronoi_stats.f90:" use :: c_stats, only : customize_stats " 2021-07-15T01:39:01,842 analyzeline: Could not crack the use statement. 2021-07-15T01:39:01,842 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:01,842 Post-processing... 2021-07-15T01:39:01,843 Block: voronoi_stats 2021-07-15T01:39:01,843 Block: voronoi_index 2021-07-15T01:39:01,843 Block: i_fold_symmetry 2021-07-15T01:39:01,843 Block: line_percent 2021-07-15T01:39:01,843 {} 2021-07-15T01:39:01,843 In: :voronoi_stats:amlearn/featurize/src/voronoi_stats.f90:character_motif 2021-07-15T01:39:01,844 vars2fortran: No typespec for argument "n_voro". 2021-07-15T01:39:01,844 {} 2021-07-15T01:39:01,844 In: :voronoi_stats:amlearn/featurize/src/voronoi_stats.f90:character_motif 2021-07-15T01:39:01,844 vars2fortran: No typespec for argument "n_target". 2021-07-15T01:39:01,844 Block: character_motif 2021-07-15T01:39:01,844 Block: area_wt_i_fold_symmetry 2021-07-15T01:39:01,844 Block: vol_wt_i_fold_symmetry 2021-07-15T01:39:01,845 Block: voronoi_area_stats 2021-07-15T01:39:01,845 Block: voronoi_area_stats_separate 2021-07-15T01:39:01,845 Block: voronoi_vol_stats 2021-07-15T01:39:01,845 Block: voronoi_vol_stats_separate 2021-07-15T01:39:01,846 Block: voronoi_distance_stats 2021-07-15T01:39:01,846 Block: determinant_func 2021-07-15T01:39:01,846 Block: determinant 2021-07-15T01:39:01,846 Block: distance 2021-07-15T01:39:01,847 Block: distance_info 2021-07-15T01:39:01,847 Block: quicksort 2021-07-15T01:39:01,847 Block: quick_sort 2021-07-15T01:39:01,847 Block: cg_function 2021-07-15T01:39:01,848 Block: calculate_cg 2021-07-15T01:39:01,848 Block: angle 2021-07-15T01:39:01,848 Block: angle_info 2021-07-15T01:39:01,848 Block: c_stats 2021-07-15T01:39:01,848 Block: customize_stats 2021-07-15T01:39:01,849 Block: a_stats 2021-07-15T01:39:01,849 Block: all_stats 2021-07-15T01:39:01,849 Post-processing (stage 2)... 2021-07-15T01:39:01,849 Block: voronoi_stats 2021-07-15T01:39:01,849 Block: unknown_interface 2021-07-15T01:39:01,850 Block: voronoi_index 2021-07-15T01:39:01,850 Block: i_fold_symmetry 2021-07-15T01:39:01,850 Block: line_percent 2021-07-15T01:39:01,850 Block: character_motif 2021-07-15T01:39:01,850 Block: area_wt_i_fold_symmetry 2021-07-15T01:39:01,851 Block: vol_wt_i_fold_symmetry 2021-07-15T01:39:01,851 Block: voronoi_area_stats 2021-07-15T01:39:01,851 Block: voronoi_area_stats_separate 2021-07-15T01:39:01,851 Block: voronoi_vol_stats 2021-07-15T01:39:01,851 Block: voronoi_vol_stats_separate 2021-07-15T01:39:01,852 Block: voronoi_distance_stats 2021-07-15T01:39:01,852 Block: determinant_func 2021-07-15T01:39:01,852 Block: determinant 2021-07-15T01:39:01,852 Block: distance 2021-07-15T01:39:01,852 Block: distance_info 2021-07-15T01:39:01,853 Block: quicksort 2021-07-15T01:39:01,853 Block: quick_sort 2021-07-15T01:39:01,853 Block: cg_function 2021-07-15T01:39:01,853 Block: calculate_cg 2021-07-15T01:39:01,853 Block: angle 2021-07-15T01:39:01,854 Block: angle_info 2021-07-15T01:39:01,854 Block: c_stats 2021-07-15T01:39:01,854 Block: customize_stats 2021-07-15T01:39:01,854 Block: a_stats 2021-07-15T01:39:01,854 Block: all_stats 2021-07-15T01:39:01,855 Building modules... 2021-07-15T01:39:01,855 Building module "voronoi_stats"... 2021-07-15T01:39:01,855 Constructing wrapper function "voronoi_index"... 2021-07-15T01:39:01,855 voronoi_index_list = voronoi_index(voronoi_index_list,n_neighbor_list,neighbor_edge_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,855 Constructing wrapper function "i_fold_symmetry"... 2021-07-15T01:39:01,856 i_symm_list = i_fold_symmetry(i_symm_list,n_neighbor_list,neighbor_edge_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,856 Constructing wrapper function "line_percent"... 2021-07-15T01:39:01,856 percent_list = line_percent(percent_list,value_list,[n_atoms,n_values]) 2021-07-15T01:39:01,856 Constructing wrapper function "character_motif"... 2021-07-15T01:39:01,856 motif_one_hot = character_motif(motif_one_hot,voronoi_index_list,edge_min,target_voro_idx,frank_kasper,[n_atoms,n_voro,n_target]) 2021-07-15T01:39:01,857 Constructing wrapper function "area_wt_i_fold_symmetry"... 2021-07-15T01:39:01,857 area_wt_i_symm_list = area_wt_i_fold_symmetry(area_wt_i_symm_list,n_neighbor_list,neighbor_edge_lists,neighbor_area_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,857 Constructing wrapper function "vol_wt_i_fold_symmetry"... 2021-07-15T01:39:01,857 vol_wt_i_symm_list = vol_wt_i_fold_symmetry(vol_wt_i_symm_list,n_neighbor_list,neighbor_edge_lists,neighbor_vol_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,857 Constructing wrapper function "voronoi_area_stats"... 2021-07-15T01:39:01,858 area_stats = voronoi_area_stats(area_stats,n_neighbor_list,neighbor_area_lists,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,858 Constructing wrapper function "voronoi_area_stats_separate"... 2021-07-15T01:39:01,858 area_stats_separate = voronoi_area_stats_separate(area_stats_separate,n_neighbor_list,neighbor_edge_lists,neighbor_area_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,858 Constructing wrapper function "voronoi_vol_stats"... 2021-07-15T01:39:01,858 vol_stats = voronoi_vol_stats(vol_stats,n_neighbor_list,neighbor_vol_lists,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,859 Constructing wrapper function "voronoi_vol_stats_separate"... 2021-07-15T01:39:01,859 vol_stats_separate = voronoi_vol_stats_separate(vol_stats_separate,n_neighbor_list,neighbor_edge_lists,neighbor_vol_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,859 Constructing wrapper function "voronoi_distance_stats"... 2021-07-15T01:39:01,859 distance_stats = voronoi_distance_stats(distance_stats,n_neighbor_list,neighbor_distance_lists,[n_atoms,neighbor_num_limit]) 2021-07-15T01:39:01,859 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:01,860 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:01,860 deter_value = determinant(matrix) 2021-07-15T01:39:01,860 Constructing F90 module support for "distance"... 2021-07-15T01:39:01,860 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:01,860 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:01,861 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:01,861 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:01,861 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:01,861 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:01,861 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:01,862 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:01,862 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:01,862 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:01,862 Constructing F90 module support for "angle"... 2021-07-15T01:39:01,862 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:01,863 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:01,863 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:01,863 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:01,863 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:01,863 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:01,864 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:01,864 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:01,864 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:01,864 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:01,864 Wrote C/API module "voronoi_stats" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_statsmodule.c" 2021-07-15T01:39:01,865 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_stats-f2pywrappers2.f90" 2021-07-15T01:39:01,865 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:01,865 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:01,865 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:39:01,865 building extension "amlearn.featurize.src.boop" sources 2021-07-15T01:39:01,866 f2py options: [] 2021-07-15T01:39:01,866 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/boopmodule.c 2021-07-15T01:39:02,219 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:02,220 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:02,221 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:02,222 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:02,273 appenddecl: "dimension" not implemented. 2021-07-15T01:39:02,281 appenddecl: "dimension" not implemented. 2021-07-15T01:39:02,283 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:02,284 appenddecl: "dimension" not implemented. 2021-07-15T01:39:02,571 Reading fortran codes... 2021-07-15T01:39:02,572 Reading file 'amlearn/featurize/src/boop.f90' (format:free) 2021-07-15T01:39:02,572 {'before': '', 'this': 'use', 'after': ':: angle '} 2021-07-15T01:39:02,572 Line #9 in amlearn/featurize/src/boop.f90:" use :: angle " 2021-07-15T01:39:02,573 analyzeline: Could not crack the use statement. 2021-07-15T01:39:02,573 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:02,573 Post-processing... 2021-07-15T01:39:02,573 Block: boop 2021-07-15T01:39:02,574 Block: calculate_boop 2021-07-15T01:39:02,574 Block: determinant_func 2021-07-15T01:39:02,574 Block: determinant 2021-07-15T01:39:02,574 Block: distance 2021-07-15T01:39:02,575 Block: distance_info 2021-07-15T01:39:02,575 Block: quicksort 2021-07-15T01:39:02,575 Block: quick_sort 2021-07-15T01:39:02,575 Block: cg_function 2021-07-15T01:39:02,575 Block: calculate_cg 2021-07-15T01:39:02,576 Block: angle 2021-07-15T01:39:02,576 Block: angle_info 2021-07-15T01:39:02,576 Block: c_stats 2021-07-15T01:39:02,576 Block: customize_stats 2021-07-15T01:39:02,576 Block: a_stats 2021-07-15T01:39:02,577 Block: all_stats 2021-07-15T01:39:02,577 Post-processing (stage 2)... 2021-07-15T01:39:02,577 Block: boop 2021-07-15T01:39:02,577 Block: unknown_interface 2021-07-15T01:39:02,577 Block: calculate_boop 2021-07-15T01:39:02,578 Block: determinant_func 2021-07-15T01:39:02,578 Block: determinant 2021-07-15T01:39:02,578 Block: distance 2021-07-15T01:39:02,578 Block: distance_info 2021-07-15T01:39:02,578 Block: quicksort 2021-07-15T01:39:02,579 Block: quick_sort 2021-07-15T01:39:02,579 Block: cg_function 2021-07-15T01:39:02,579 Block: calculate_cg 2021-07-15T01:39:02,579 Block: angle 2021-07-15T01:39:02,579 Block: angle_info 2021-07-15T01:39:02,580 Block: c_stats 2021-07-15T01:39:02,580 Block: customize_stats 2021-07-15T01:39:02,580 Block: a_stats 2021-07-15T01:39:02,580 Block: all_stats 2021-07-15T01:39:02,580 Building modules... 2021-07-15T01:39:02,580 Building module "boop"... 2021-07-15T01:39:02,581 Constructing wrapper function "calculate_boop"... 2021-07-15T01:39:02,581 ql,wlbar,coarse_ql,coarse_wlbar = calculate_boop(atom_coords,pbc,bds,n_neighbor_list,neighbor_lists,low_order,higher_order,coarse_lower_order,coarse_higher_order,ql,wlbar,coarse_ql,coarse_wlbar,[n_atoms,n_neighbor_limit]) 2021-07-15T01:39:02,581 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:02,581 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:02,582 deter_value = determinant(matrix) 2021-07-15T01:39:02,582 Constructing F90 module support for "distance"... 2021-07-15T01:39:02,582 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:02,582 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:02,583 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:02,583 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:02,583 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:02,583 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:02,583 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:02,584 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:02,584 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:02,584 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:02,584 Constructing F90 module support for "angle"... 2021-07-15T01:39:02,585 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:02,585 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:02,585 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:02,585 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:02,585 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:02,586 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:02,586 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:02,586 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:02,586 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:02,586 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:02,587 Wrote C/API module "boop" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/boopmodule.c" 2021-07-15T01:39:02,587 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/boop-f2pywrappers2.f90" 2021-07-15T01:39:02,587 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:02,587 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:02,588 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/boop-f2pywrappers2.f90' to sources. 2021-07-15T01:39:02,588 building extension "amlearn.featurize.src.mro_stats" sources 2021-07-15T01:39:02,588 f2py options: [] 2021-07-15T01:39:02,588 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_statsmodule.c 2021-07-15T01:39:02,685 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:02,686 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:02,687 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:02,688 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:02,735 appenddecl: "dimension" not implemented. 2021-07-15T01:39:02,748 appenddecl: "dimension" not implemented. 2021-07-15T01:39:02,752 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:02,753 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,012 Reading fortran codes... 2021-07-15T01:39:03,012 Reading file 'amlearn/featurize/src/mro_stats.f90' (format:free) 2021-07-15T01:39:03,013 {'before': '', 'this': 'use', 'after': ':: c_stats '} 2021-07-15T01:39:03,013 Line #5 in amlearn/featurize/src/mro_stats.f90:" use :: c_stats " 2021-07-15T01:39:03,013 analyzeline: Could not crack the use statement. 2021-07-15T01:39:03,013 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:03,014 Post-processing... 2021-07-15T01:39:03,014 Block: mro_stats 2021-07-15T01:39:03,014 {'attrspec': ['intent(in)']} 2021-07-15T01:39:03,014 In: :mro_stats:amlearn/featurize/src/mro_stats.f90:sro_to_mro 2021-07-15T01:39:03,015 vars2fortran: No typespec for argument "n_neighbor_limit". 2021-07-15T01:39:03,015 Block: sro_to_mro 2021-07-15T01:39:03,015 Block: determinant_func 2021-07-15T01:39:03,015 Block: determinant 2021-07-15T01:39:03,015 Block: distance 2021-07-15T01:39:03,016 Block: distance_info 2021-07-15T01:39:03,016 Block: quicksort 2021-07-15T01:39:03,016 Block: quick_sort 2021-07-15T01:39:03,016 Block: cg_function 2021-07-15T01:39:03,016 Block: calculate_cg 2021-07-15T01:39:03,016 Block: angle 2021-07-15T01:39:03,017 Block: angle_info 2021-07-15T01:39:03,017 Block: c_stats 2021-07-15T01:39:03,017 Block: customize_stats 2021-07-15T01:39:03,017 Block: a_stats 2021-07-15T01:39:03,017 Block: all_stats 2021-07-15T01:39:03,018 Post-processing (stage 2)... 2021-07-15T01:39:03,018 Block: mro_stats 2021-07-15T01:39:03,018 Block: unknown_interface 2021-07-15T01:39:03,018 Block: sro_to_mro 2021-07-15T01:39:03,018 Block: determinant_func 2021-07-15T01:39:03,019 Block: determinant 2021-07-15T01:39:03,019 Block: distance 2021-07-15T01:39:03,019 Block: distance_info 2021-07-15T01:39:03,019 Block: quicksort 2021-07-15T01:39:03,019 Block: quick_sort 2021-07-15T01:39:03,020 Block: cg_function 2021-07-15T01:39:03,020 Block: calculate_cg 2021-07-15T01:39:03,020 Block: angle 2021-07-15T01:39:03,020 Block: angle_info 2021-07-15T01:39:03,020 Block: c_stats 2021-07-15T01:39:03,020 Block: customize_stats 2021-07-15T01:39:03,021 Block: a_stats 2021-07-15T01:39:03,021 Block: all_stats 2021-07-15T01:39:03,021 Building modules... 2021-07-15T01:39:03,021 Building module "mro_stats"... 2021-07-15T01:39:03,021 Constructing wrapper function "sro_to_mro"... 2021-07-15T01:39:03,022 mro_feature = sro_to_mro(sro_feature,n_neighbor_list,neighbor_lists,stats_types,mro_feature,[n_atoms,n_neighbor_limit,sum_stats_types]) 2021-07-15T01:39:03,022 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:03,022 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:03,022 deter_value = determinant(matrix) 2021-07-15T01:39:03,022 Constructing F90 module support for "distance"... 2021-07-15T01:39:03,023 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:03,023 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:03,023 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:03,023 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:03,023 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:03,023 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:03,024 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:03,024 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:03,024 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:03,024 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:03,024 Constructing F90 module support for "angle"... 2021-07-15T01:39:03,024 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:03,025 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:03,025 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:03,025 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:03,025 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:03,025 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:03,026 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:03,026 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:03,026 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:03,026 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:03,026 Wrote C/API module "mro_stats" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_statsmodule.c" 2021-07-15T01:39:03,026 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_stats-f2pywrappers2.f90" 2021-07-15T01:39:03,027 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:03,027 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:03,027 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:39:03,027 building extension "amlearn.featurize.src.neighbor_data" sources 2021-07-15T01:39:03,027 f2py options: [] 2021-07-15T01:39:03,028 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_datamodule.c 2021-07-15T01:39:03,135 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,136 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,137 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:03,137 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:03,170 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,177 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,180 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,181 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,442 Reading fortran codes... 2021-07-15T01:39:03,443 Reading file 'amlearn/featurize/src/neighbor_data.f90' (format:free) 2021-07-15T01:39:03,443 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:03,443 Post-processing... 2021-07-15T01:39:03,443 Block: neighbor_data 2021-07-15T01:39:03,443 Block: add_neighbor_features 2021-07-15T01:39:03,444 Block: determinant_func 2021-07-15T01:39:03,444 Block: determinant 2021-07-15T01:39:03,444 Block: distance 2021-07-15T01:39:03,445 Block: distance_info 2021-07-15T01:39:03,445 Block: quicksort 2021-07-15T01:39:03,445 Block: quick_sort 2021-07-15T01:39:03,445 Block: cg_function 2021-07-15T01:39:03,446 Block: calculate_cg 2021-07-15T01:39:03,446 Block: angle 2021-07-15T01:39:03,446 Block: angle_info 2021-07-15T01:39:03,446 Block: c_stats 2021-07-15T01:39:03,446 Block: customize_stats 2021-07-15T01:39:03,447 Block: a_stats 2021-07-15T01:39:03,447 Block: all_stats 2021-07-15T01:39:03,447 Post-processing (stage 2)... 2021-07-15T01:39:03,447 Block: neighbor_data 2021-07-15T01:39:03,447 Block: unknown_interface 2021-07-15T01:39:03,448 Block: add_neighbor_features 2021-07-15T01:39:03,448 Block: determinant_func 2021-07-15T01:39:03,448 Block: determinant 2021-07-15T01:39:03,448 Block: distance 2021-07-15T01:39:03,449 Block: distance_info 2021-07-15T01:39:03,449 Block: quicksort 2021-07-15T01:39:03,449 Block: quick_sort 2021-07-15T01:39:03,449 Block: cg_function 2021-07-15T01:39:03,449 Block: calculate_cg 2021-07-15T01:39:03,450 Block: angle 2021-07-15T01:39:03,450 Block: angle_info 2021-07-15T01:39:03,450 Block: c_stats 2021-07-15T01:39:03,450 Block: customize_stats 2021-07-15T01:39:03,450 Block: a_stats 2021-07-15T01:39:03,451 Block: all_stats 2021-07-15T01:39:03,451 Building modules... 2021-07-15T01:39:03,451 Building module "neighbor_data"... 2021-07-15T01:39:03,451 Constructing wrapper function "add_neighbor_features"... 2021-07-15T01:39:03,451 features_new = add_neighbor_features(pred_last,neigh_voro,probs,features_new,[n_atoms,n_neighs,n_probs,n_features]) 2021-07-15T01:39:03,452 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:03,452 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:03,452 deter_value = determinant(matrix) 2021-07-15T01:39:03,452 Constructing F90 module support for "distance"... 2021-07-15T01:39:03,452 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:03,453 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:03,453 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:03,453 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:03,453 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:03,453 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:03,454 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:03,454 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:03,454 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:03,454 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:03,454 Constructing F90 module support for "angle"... 2021-07-15T01:39:03,455 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:03,455 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:03,455 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:03,455 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:03,456 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:03,456 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:03,456 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:03,456 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:03,456 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:03,457 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:03,457 Wrote C/API module "neighbor_data" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_datamodule.c" 2021-07-15T01:39:03,457 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_data-f2pywrappers2.f90" 2021-07-15T01:39:03,457 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:03,458 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:03,458 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_data-f2pywrappers2.f90' to sources. 2021-07-15T01:39:03,458 building extension "amlearn.featurize.src.distance_stats" sources 2021-07-15T01:39:03,458 f2py options: [] 2021-07-15T01:39:03,459 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_statsmodule.c 2021-07-15T01:39:03,562 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,563 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,564 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:03,564 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:03,597 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,605 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,608 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,609 appenddecl: "dimension" not implemented. 2021-07-15T01:39:03,870 Reading fortran codes... 2021-07-15T01:39:03,871 Reading file 'amlearn/featurize/src/distance_stats.f90' (format:free) 2021-07-15T01:39:03,871 {'before': '', 'this': 'use', 'after': ':: a_stats '} 2021-07-15T01:39:03,871 Line #17 in amlearn/featurize/src/distance_stats.f90:" use :: a_stats " 2021-07-15T01:39:03,871 analyzeline: Could not crack the use statement. 2021-07-15T01:39:03,872 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:03,872 Post-processing... 2021-07-15T01:39:03,872 Block: distance_stats 2021-07-15T01:39:03,872 Block: cn_dist 2021-07-15T01:39:03,873 Block: cutoff_distance_stats 2021-07-15T01:39:03,873 Block: determinant_func 2021-07-15T01:39:03,873 Block: determinant 2021-07-15T01:39:03,873 Block: distance 2021-07-15T01:39:03,874 Block: distance_info 2021-07-15T01:39:03,874 Block: quicksort 2021-07-15T01:39:03,874 Block: quick_sort 2021-07-15T01:39:03,874 Block: cg_function 2021-07-15T01:39:03,874 Block: calculate_cg 2021-07-15T01:39:03,875 Block: angle 2021-07-15T01:39:03,875 Block: angle_info 2021-07-15T01:39:03,875 Block: c_stats 2021-07-15T01:39:03,875 Block: customize_stats 2021-07-15T01:39:03,875 Block: a_stats 2021-07-15T01:39:03,875 Block: all_stats 2021-07-15T01:39:03,875 Post-processing (stage 2)... 2021-07-15T01:39:03,876 Block: distance_stats 2021-07-15T01:39:03,876 Block: unknown_interface 2021-07-15T01:39:03,876 Block: cn_dist 2021-07-15T01:39:03,876 Block: cutoff_distance_stats 2021-07-15T01:39:03,876 Block: determinant_func 2021-07-15T01:39:03,877 Block: determinant 2021-07-15T01:39:03,877 Block: distance 2021-07-15T01:39:03,877 Block: distance_info 2021-07-15T01:39:03,877 Block: quicksort 2021-07-15T01:39:03,877 Block: quick_sort 2021-07-15T01:39:03,878 Block: cg_function 2021-07-15T01:39:03,878 Block: calculate_cg 2021-07-15T01:39:03,878 Block: angle 2021-07-15T01:39:03,878 Block: angle_info 2021-07-15T01:39:03,878 Block: c_stats 2021-07-15T01:39:03,879 Block: customize_stats 2021-07-15T01:39:03,879 Block: a_stats 2021-07-15T01:39:03,879 Block: all_stats 2021-07-15T01:39:03,879 Building modules... 2021-07-15T01:39:03,879 Building module "distance_stats"... 2021-07-15T01:39:03,880 Constructing wrapper function "cn_dist"... 2021-07-15T01:39:03,880 cn = cn_dist(n_neighbor_list) 2021-07-15T01:39:03,880 Constructing wrapper function "cutoff_distance_stats"... 2021-07-15T01:39:03,880 cutoff_distance_stats(distance_stats,n_neighbor_list,neighbor_distance_lists,[n_atoms,n_neighbor_limit]) 2021-07-15T01:39:03,880 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:03,881 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:03,881 deter_value = determinant(matrix) 2021-07-15T01:39:03,881 Constructing F90 module support for "distance"... 2021-07-15T01:39:03,881 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:03,881 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:03,882 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:03,882 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:03,882 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:03,882 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:03,882 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:03,883 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:03,883 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:03,883 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:03,883 Constructing F90 module support for "angle"... 2021-07-15T01:39:03,883 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:03,884 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:03,884 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:03,884 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:03,884 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:03,885 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:03,885 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:03,885 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:03,885 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:03,885 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:03,886 Wrote C/API module "distance_stats" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_statsmodule.c" 2021-07-15T01:39:03,886 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_stats-f2pywrappers2.f90" 2021-07-15T01:39:03,886 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:03,886 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:03,886 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:39:03,887 building extension "amlearn.featurize.src.distance_nn" sources 2021-07-15T01:39:03,887 f2py options: [] 2021-07-15T01:39:03,887 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nnmodule.c 2021-07-15T01:39:03,992 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,993 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:03,994 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:39:03,994 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:39:04,032 appenddecl: "dimension" not implemented. 2021-07-15T01:39:04,040 appenddecl: "dimension" not implemented. 2021-07-15T01:39:04,043 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:39:04,044 appenddecl: "dimension" not implemented. 2021-07-15T01:39:04,317 Reading fortran codes... 2021-07-15T01:39:04,317 Reading file 'amlearn/featurize/src/distance_nn.f90' (format:free) 2021-07-15T01:39:04,318 {'before': '', 'this': 'use', 'after': ':: distance '} 2021-07-15T01:39:04,318 Line #29 in amlearn/featurize/src/distance_nn.f90:" use :: distance " 2021-07-15T01:39:04,318 analyzeline: Could not crack the use statement. 2021-07-15T01:39:04,318 {'before': '', 'this': 'use', 'after': ':: quicksort '} 2021-07-15T01:39:04,319 Line #31 in amlearn/featurize/src/distance_nn.f90:" use :: quicksort " 2021-07-15T01:39:04,319 analyzeline: Could not crack the use statement. 2021-07-15T01:39:04,319 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:39:04,319 Post-processing... 2021-07-15T01:39:04,320 Block: distance_nn 2021-07-15T01:39:04,320 Block: distance_neighbor 2021-07-15T01:39:04,320 Block: determinant_func 2021-07-15T01:39:04,320 Block: determinant 2021-07-15T01:39:04,321 Block: distance 2021-07-15T01:39:04,321 Block: distance_info 2021-07-15T01:39:04,321 Block: quicksort 2021-07-15T01:39:04,321 Block: quick_sort 2021-07-15T01:39:04,322 Block: cg_function 2021-07-15T01:39:04,322 Block: calculate_cg 2021-07-15T01:39:04,323 Block: angle 2021-07-15T01:39:04,323 Block: angle_info 2021-07-15T01:39:04,323 Block: c_stats 2021-07-15T01:39:04,324 Block: customize_stats 2021-07-15T01:39:04,324 Block: a_stats 2021-07-15T01:39:04,324 Block: all_stats 2021-07-15T01:39:04,325 Post-processing (stage 2)... 2021-07-15T01:39:04,325 Block: distance_nn 2021-07-15T01:39:04,325 Block: unknown_interface 2021-07-15T01:39:04,326 Block: distance_neighbor 2021-07-15T01:39:04,326 Block: determinant_func 2021-07-15T01:39:04,326 Block: determinant 2021-07-15T01:39:04,326 Block: distance 2021-07-15T01:39:04,327 Block: distance_info 2021-07-15T01:39:04,327 Block: quicksort 2021-07-15T01:39:04,327 Block: quick_sort 2021-07-15T01:39:04,328 Block: cg_function 2021-07-15T01:39:04,328 Block: calculate_cg 2021-07-15T01:39:04,329 Block: angle 2021-07-15T01:39:04,329 Block: angle_info 2021-07-15T01:39:04,329 Block: c_stats 2021-07-15T01:39:04,329 Block: customize_stats 2021-07-15T01:39:04,330 Block: a_stats 2021-07-15T01:39:04,330 Block: all_stats 2021-07-15T01:39:04,330 Building modules... 2021-07-15T01:39:04,331 Building module "distance_nn"... 2021-07-15T01:39:04,331 Constructing wrapper function "distance_neighbor"... 2021-07-15T01:39:04,331 n_neighbor_max,n_neighbor_list,neighbor_lists,neighbor_distance_lists = distance_neighbor(atom_type,atom_coords,distance_cutoff,allow_neighbor_limit,pbc,bds,n_neighbor_max,n_neighbor_list,neighbor_lists,neighbor_distance_lists,[n_atoms,n_neighbor_limit]) 2021-07-15T01:39:04,332 Constructing F90 module support for "determinant_func"... 2021-07-15T01:39:04,332 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:39:04,332 deter_value = determinant(matrix) 2021-07-15T01:39:04,332 Constructing F90 module support for "distance"... 2021-07-15T01:39:04,333 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:39:04,333 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:04,333 Constructing F90 module support for "quicksort"... 2021-07-15T01:39:04,333 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:39:04,334 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:39:04,334 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:39:04,334 Constructing F90 module support for "cg_function"... 2021-07-15T01:39:04,335 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:39:04,335 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:39:04,335 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:39:04,335 Constructing F90 module support for "angle"... 2021-07-15T01:39:04,336 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:39:04,336 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:39:04,336 Constructing F90 module support for "c_stats"... 2021-07-15T01:39:04,336 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:39:04,337 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:39:04,337 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:39:04,337 Constructing F90 module support for "a_stats"... 2021-07-15T01:39:04,337 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:39:04,338 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:39:04,338 stats = all_stats(list,[len_bn]) 2021-07-15T01:39:04,338 Wrote C/API module "distance_nn" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nnmodule.c" 2021-07-15T01:39:04,338 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nn-f2pywrappers2.f90" 2021-07-15T01:39:04,339 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:04,339 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:04,339 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:39:04,340 build_src: building npy-pkg config files 2021-07-15T01:39:04,340 creating /tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info 2021-07-15T01:39:04,340 writing /tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/PKG-INFO 2021-07-15T01:39:04,340 writing dependency_links to /tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/dependency_links.txt 2021-07-15T01:39:04,341 writing requirements to /tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/requires.txt 2021-07-15T01:39:04,341 writing top-level names to /tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/top_level.txt 2021-07-15T01:39:04,341 writing manifest file '/tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/SOURCES.txt' 2021-07-15T01:39:04,400 reading manifest file '/tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/SOURCES.txt' 2021-07-15T01:39:04,408 writing manifest file '/tmp/pip-pip-egg-info-ihyoenm0/amlearn.egg-info/SOURCES.txt' 2021-07-15T01:39:04,567 Source in /tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636 has version 0.2.0, which satisfies requirement amlearn==0.2.0 from https://files.pythonhosted.org/packages/d8/26/d78c59d9be85d65e5fae532c317c98f8dc8184831f66a0ae50fc6099e23d/amlearn-0.2.0.tar.gz#sha256=02a6393944cbf8a784db0d554708f37a035c9203518531e46e870bc1453cef7f 2021-07-15T01:39:04,568 Removed amlearn==0.2.0 from https://files.pythonhosted.org/packages/d8/26/d78c59d9be85d65e5fae532c317c98f8dc8184831f66a0ae50fc6099e23d/amlearn-0.2.0.tar.gz#sha256=02a6393944cbf8a784db0d554708f37a035c9203518531e46e870bc1453cef7f from build tracker '/tmp/pip-req-tracker-cr1t0645' 2021-07-15T01:39:04,574 Created temporary directory: /tmp/pip-unpack-by1eyyop 2021-07-15T01:39:04,574 Building wheels for collected packages: amlearn 2021-07-15T01:39:04,580 Created temporary directory: /tmp/pip-wheel-at02cq6s 2021-07-15T01:39:04,581 Building wheel for amlearn (setup.py): started 2021-07-15T01:39:04,581 Destination directory: /tmp/pip-wheel-at02cq6s 2021-07-15T01:39:04,581 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-at02cq6s 2021-07-15T01:39:06,200 running bdist_wheel 2021-07-15T01:39:06,202 running build 2021-07-15T01:39:06,202 running config_cc 2021-07-15T01:39:06,202 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2021-07-15T01:39:06,203 running config_fc 2021-07-15T01:39:06,203 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2021-07-15T01:39:06,204 running build_src 2021-07-15T01:39:06,204 build_src 2021-07-15T01:39:06,204 building extension "amlearn.featurize.src.utils" sources 2021-07-15T01:39:06,204 f2py options: [] 2021-07-15T01:39:06,204 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,205 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,302 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/utils-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,302 building extension "amlearn.featurize.src.voronoi_nn" sources 2021-07-15T01:39:06,302 f2py options: [] 2021-07-15T01:39:06,302 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,303 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,303 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,303 building extension "amlearn.featurize.src.voronoi_stats" sources 2021-07-15T01:39:06,303 f2py options: [] 2021-07-15T01:39:06,303 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,303 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,303 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,303 building extension "amlearn.featurize.src.boop" sources 2021-07-15T01:39:06,304 f2py options: [] 2021-07-15T01:39:06,304 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,304 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,304 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/boop-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,305 building extension "amlearn.featurize.src.mro_stats" sources 2021-07-15T01:39:06,305 f2py options: [] 2021-07-15T01:39:06,305 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,305 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,305 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,305 building extension "amlearn.featurize.src.neighbor_data" sources 2021-07-15T01:39:06,305 f2py options: [] 2021-07-15T01:39:06,306 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,306 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,306 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_data-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,306 building extension "amlearn.featurize.src.distance_stats" sources 2021-07-15T01:39:06,306 f2py options: [] 2021-07-15T01:39:06,306 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,306 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,307 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,307 building extension "amlearn.featurize.src.distance_nn" sources 2021-07-15T01:39:06,307 f2py options: [] 2021-07-15T01:39:06,307 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:39:06,307 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:39:06,307 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:39:06,307 build_src: building npy-pkg config files 2021-07-15T01:39:06,308 running build_py 2021-07-15T01:39:06,312 creating build/lib.linux-armv7l-3.9 2021-07-15T01:39:06,312 creating build/lib.linux-armv7l-3.9/amlearn 2021-07-15T01:39:06,313 copying amlearn/_version.py -> build/lib.linux-armv7l-3.9/amlearn 2021-07-15T01:39:06,315 copying amlearn/__init__.py -> build/lib.linux-armv7l-3.9/amlearn 2021-07-15T01:39:06,318 creating build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,318 copying scripts/pdp_plot.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,321 copying scripts/feature_violinplot.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,323 copying scripts/distribution.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,325 copying scripts/generalization.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,327 copying scripts/featurize_bp_symmfunc.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,329 copying scripts/fractal_analysis.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,331 copying scripts/__init__.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,333 copying scripts/featurize_interstice.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:39:06,335 creating build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:39:06,336 copying amlearn/learn/base.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:39:06,338 copying amlearn/learn/classifier.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:39:06,341 copying amlearn/learn/preprocessor.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:39:06,343 copying amlearn/learn/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:39:06,345 copying amlearn/learn/regressor.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:39:06,348 creating build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,349 copying amlearn/utils/data.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,351 copying amlearn/utils/backend.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,354 copying amlearn/utils/verbose.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,356 copying amlearn/utils/basetest.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,357 copying amlearn/utils/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,359 copying amlearn/utils/directory.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,361 copying amlearn/utils/packing.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,363 copying amlearn/utils/check.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,365 copying amlearn/utils/logging.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,368 creating build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,369 copying amlearn/featurize/pipeline.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,371 copying amlearn/featurize/nearest_neighbor.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,374 copying amlearn/featurize/base.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,375 copying amlearn/featurize/short_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,379 copying amlearn/featurize/medium_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,382 copying amlearn/featurize/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,383 copying amlearn/featurize/symmetry_function.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:06,386 creating build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:39:06,387 copying amlearn/learn/sklearn_patch/_validation.py -> build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:39:06,391 copying amlearn/learn/sklearn_patch/_split.py -> build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:39:06,396 copying amlearn/learn/sklearn_patch/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:39:06,398 creating build/lib.linux-armv7l-3.9/amlearn/learn/tests 2021-07-15T01:39:06,399 copying amlearn/learn/tests/test_classifier.py -> build/lib.linux-armv7l-3.9/amlearn/learn/tests 2021-07-15T01:39:06,401 copying amlearn/learn/tests/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/learn/tests 2021-07-15T01:39:06,404 creating build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:39:06,405 copying amlearn/utils/tests/test_backend.py -> build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:39:06,407 copying amlearn/utils/tests/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:39:06,409 copying amlearn/utils/tests/test_data.py -> build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:39:06,411 creating build/lib.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:06,412 copying amlearn/featurize/src/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:06,415 creating build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:39:06,415 copying amlearn/featurize/tests/test_medium_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:39:06,418 copying amlearn/featurize/tests/test_short_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:39:06,421 copying amlearn/featurize/tests/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:39:06,423 copying amlearn/featurize/tests/test_featurizer_pipeline.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:39:06,425 copying amlearn/featurize/tests/test_nearest_neighbor.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:39:06,427 copying amlearn/utils/default_environment.yaml -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,429 copying amlearn/utils/amlearn_logging.yaml -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,431 copying amlearn/utils/PTE.json -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:39:06,442 running build_ext 2021-07-15T01:39:06,449 customize UnixCCompiler 2021-07-15T01:39:06,452 customize UnixCCompiler using build_ext 2021-07-15T01:39:06,571 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=native) 2021-07-15T01:39:06,572 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:06,573 creating /tmp/tmpqphetekv/home 2021-07-15T01:39:06,573 creating /tmp/tmpqphetekv/home/piwheels 2021-07-15T01:39:06,574 creating /tmp/tmpqphetekv/home/piwheels/.local 2021-07-15T01:39:06,575 creating /tmp/tmpqphetekv/home/piwheels/.local/lib 2021-07-15T01:39:06,575 creating /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9 2021-07-15T01:39:06,576 creating /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages 2021-07-15T01:39:06,577 creating /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy 2021-07-15T01:39:06,577 creating /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils 2021-07-15T01:39:06,578 creating /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks 2021-07-15T01:39:06,578 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:06,579 extra options: '-march=native' 2021-07-15T01:39:06,681 CCompilerOpt.cc_test_flags[1008] : testing flags (-O3) 2021-07-15T01:39:06,682 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:06,683 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:06,683 extra options: '-O3' 2021-07-15T01:39:06,787 CCompilerOpt.cc_test_flags[1008] : testing flags (-Werror) 2021-07-15T01:39:06,787 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:06,788 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:06,788 extra options: '-Werror' 2021-07-15T01:39:06,890 CCompilerOpt.__init__[1696] : check requested baseline 2021-07-15T01:39:06,896 CCompilerOpt.__init__[1705] : check requested dispatch-able features 2021-07-15T01:39:06,904 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon) 2021-07-15T01:39:06,905 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:06,905 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:06,906 extra options: '-mfpu=neon' 2021-07-15T01:39:07,000 CCompilerOpt.feature_test[1461] : testing feature 'NEON' with flags (-mfpu=neon) 2021-07-15T01:39:07,001 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:07,001 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:07,002 extra options: '-mfpu=neon -Werror' 2021-07-15T01:39:07,480 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2021-07-15T01:39:07,480 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:07,481 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:07,481 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee' 2021-07-15T01:39:07,583 CCompilerOpt.feature_test[1461] : testing feature 'NEON_FP16' with flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2021-07-15T01:39:07,583 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:07,584 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:07,584 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee -Werror' 2021-07-15T01:39:08,098 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-vfpv4) 2021-07-15T01:39:08,098 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:08,099 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:08,099 extra options: '-mfpu=neon-vfpv4' 2021-07-15T01:39:08,199 CCompilerOpt.feature_test[1461] : testing feature 'NEON_VFPV4' with flags (-mfp16-format=ieee -mfpu=neon-vfpv4) 2021-07-15T01:39:08,199 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:08,200 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:08,200 extra options: '-mfp16-format=ieee -mfpu=neon-vfpv4 -Werror' 2021-07-15T01:39:08,655 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp-armv8 -march=armv8-a+simd) 2021-07-15T01:39:08,655 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:08,656 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:08,657 extra options: '-mfpu=neon-fp-armv8 -march=armv8-a+simd' 2021-07-15T01:39:08,763 CCompilerOpt.feature_test[1461] : testing feature 'ASIMD' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd) 2021-07-15T01:39:08,764 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:08,765 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:08,765 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd -Werror' 2021-07-15T01:39:09,404 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16) 2021-07-15T01:39:09,404 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:09,405 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:09,405 extra options: '-march=armv8.2-a+fp16' 2021-07-15T01:39:09,502 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDHP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16) 2021-07-15T01:39:09,502 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:09,503 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:09,503 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16 -Werror' 2021-07-15T01:39:10,082 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16fml) 2021-07-15T01:39:10,083 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:10,084 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:10,084 extra options: '-march=armv8.2-a+fp16fml' 2021-07-15T01:39:10,183 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDFHM' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml) 2021-07-15T01:39:10,184 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:10,185 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:10,185 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror' 2021-07-15T01:39:10,662 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c -o /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.o -MMD -MF /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror) failed with exit status 1 output -> 2021-07-15T01:39:10,663 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c: In function ‘main’: 2021-07-15T01:39:10,663 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: implicit declaration of function ‘vfmlal_low_u32’; did you mean ‘vfmlal_low_f16’? [-Werror=implicit-function-declaration] 2021-07-15T01:39:10,663 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2021-07-15T01:39:10,663 | ^~~~~~~~~~~~~~ 2021-07-15T01:39:10,664 | vfmlal_low_f16 2021-07-15T01:39:10,664 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: incompatible type for argument 1 of ‘vget_lane_f32’ 2021-07-15T01:39:10,664 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2021-07-15T01:39:10,665 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T01:39:10,665 | | 2021-07-15T01:39:10,665 | int 2021-07-15T01:39:10,665 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:4: 2021-07-15T01:39:10,665 /usr/lib/gcc/arm-linux-gnueabihf/10/include/arm_neon.h:6171:28: note: expected ‘float32x2_t’ but argument is of type ‘int’ 2021-07-15T01:39:10,665 6171 | vget_lane_f32 (float32x2_t __a, const int __b) 2021-07-15T01:39:10,666 | ~~~~~~~~~~~~^~~ 2021-07-15T01:39:10,666 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: implicit declaration of function ‘vfmlslq_high_u32’; did you mean ‘vfmlslq_high_f16’? [-Werror=implicit-function-declaration] 2021-07-15T01:39:10,666 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2021-07-15T01:39:10,667 | ^~~~~~~~~~~~~~~~ 2021-07-15T01:39:10,667 | vfmlslq_high_f16 2021-07-15T01:39:10,667 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: incompatible type for argument 1 of ‘vgetq_lane_f32’ 2021-07-15T01:39:10,667 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2021-07-15T01:39:10,668 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T01:39:10,668 | | 2021-07-15T01:39:10,668 | int 2021-07-15T01:39:10,668 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:4: 2021-07-15T01:39:10,669 /usr/lib/gcc/arm-linux-gnueabihf/10/include/arm_neon.h:6269:29: note: expected ‘float32x4_t’ but argument is of type ‘int’ 2021-07-15T01:39:10,669 6269 | vgetq_lane_f32 (float32x4_t __a, const int __b) 2021-07-15T01:39:10,669 | ~~~~~~~~~~~~^~~ 2021-07-15T01:39:10,669 cc1: all warnings being treated as errors 2021-07-15T01:39:10,670 CCompilerOpt.feature_test[1477] : testing failed 2021-07-15T01:39:10,677 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+dotprod) 2021-07-15T01:39:10,678 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:10,678 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:10,679 extra options: '-march=armv8.2-a+dotprod' 2021-07-15T01:39:10,776 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDDP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod) 2021-07-15T01:39:10,776 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:10,777 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:39:10,777 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror' 2021-07-15T01:39:11,343 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimddp.c -o /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimddp.o -MMD -MF /tmp/tmpqphetekv/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimddp.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror) failed with exit status 1 output -> 2021-07-15T01:39:11,344 /tmp/cc7Qpa1g.s: Assembler messages: 2021-07-15T01:39:11,344 /tmp/cc7Qpa1g.s:79: Error: selected processor does not support `vudot.u8 q8,q9,q10' in ARM mode 2021-07-15T01:39:11,351 CCompilerOpt.feature_test[1477] : testing failed 2021-07-15T01:39:11,357 CCompilerOpt.__init__[1721] : initialize targets groups 2021-07-15T01:39:11,364 CCompilerOpt.__init__[1723] : parse target group simd_test 2021-07-15T01:39:11,370 CCompilerOpt._parse_target_tokens[1934] : skip targets (VSX SSE2 AVX512_SKX VSX2 (AVX2 FMA3) AVX512F SSE42 FMA4 XOP VSX3) not part of baseline or dispatch-able features 2021-07-15T01:39:11,377 CCompilerOpt.generate_dispatch_header[2267] : generate CPU dispatch header: (build/src.linux-armv7l-3.9/numpy/distutils/include/npy_cpu_dispatch_config.h) 2021-07-15T01:39:11,383 CCompilerOpt.generate_dispatch_header[2276] : dispatch header dir build/src.linux-armv7l-3.9/numpy/distutils/include does not exist, creating it 2021-07-15T01:39:11,449 get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2021-07-15T01:39:11,449 customize Gnu95FCompiler 2021-07-15T01:39:11,450 Found executable /usr/bin/gfortran 2021-07-15T01:39:11,507 customize Gnu95FCompiler 2021-07-15T01:39:11,563 customize Gnu95FCompiler using build_ext 2021-07-15T01:39:11,564 building 'amlearn.featurize.src.utils' extension 2021-07-15T01:39:11,566 compiling C sources 2021-07-15T01:39:11,566 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:39:11,567 creating build/temp.linux-armv7l-3.9/build 2021-07-15T01:39:11,568 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-15T01:39:11,569 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:39:11,570 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:11,571 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:11,572 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build 2021-07-15T01:39:11,573 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-15T01:39:11,574 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:39:11,575 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:11,576 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:11,577 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-15T01:39:11,608 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c 2021-07-15T01:39:11,652 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c 2021-07-15T01:39:12,080 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T01:39:12,080 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T01:39:12,081 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T01:39:12,081 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.h:13, 2021-07-15T01:39:12,081 from build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c:16: 2021-07-15T01:39:12,081 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T01:39:12,081 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T01:39:12,082 | ^~~~~~~ 2021-07-15T01:39:12,125 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T01:39:12,125 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T01:39:12,126 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T01:39:12,126 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.h:13, 2021-07-15T01:39:12,126 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c:2: 2021-07-15T01:39:12,126 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T01:39:12,126 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T01:39:12,127 | ^~~~~~~ 2021-07-15T01:39:12,163 build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c:109:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2021-07-15T01:39:12,163 109 | static int f2py_size(PyArrayObject* var, ...) 2021-07-15T01:39:12,163 | ^~~~~~~~~ 2021-07-15T01:39:13,512 compiling Fortran 90 module sources 2021-07-15T01:39:13,513 creating build/temp.linux-armv7l-3.9/amlearn 2021-07-15T01:39:13,514 creating build/temp.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:39:13,515 creating build/temp.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:39:13,517 Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops 2021-07-15T01:39:13,517 Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2021-07-15T01:39:13,517 Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2021-07-15T01:39:13,518 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-15T01:39:13,518 extra options: '-Jbuild/temp.linux-armv7l-3.9/amlearn/featurize/src -Ibuild/temp.linux-armv7l-3.9/amlearn/featurize/src' 2021-07-15T01:39:13,520 gfortran:f90: amlearn/featurize/src/utils.f90 2021-07-15T01:39:13,603 amlearn/featurize/src/utils.f90:259:16: 2021-07-15T01:39:13,604 259 | REAL(16) :: std 2021-07-15T01:39:13,604 | 1 2021-07-15T01:39:13,604 Error: Kind 16 not supported for type REAL at (1) 2021-07-15T01:39:13,605 amlearn/featurize/src/utils.f90:285:18: 2021-07-15T01:39:13,605 285 | std = std + (list(atom) - mean)**2 2021-07-15T01:39:13,606 | 1 2021-07-15T01:39:13,606 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 2021-07-15T01:39:13,613 error: Command "/usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops -Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c -c amlearn/featurize/src/utils.f90 -o build/temp.linux-armv7l-3.9/amlearn/featurize/src/utils.o -Jbuild/temp.linux-armv7l-3.9/amlearn/featurize/src -Ibuild/temp.linux-armv7l-3.9/amlearn/featurize/src" failed with exit status 1 2021-07-15T01:39:13,614 ########### EXT COMPILER OPTIMIZATION ########### 2021-07-15T01:39:13,615 Platform : 2021-07-15T01:39:13,615 Architecture: armhf 2021-07-15T01:39:13,615 Compiler : gcc 2021-07-15T01:39:13,616 CPU baseline : 2021-07-15T01:39:13,616 Requested : 'min' 2021-07-15T01:39:13,616 Enabled : none 2021-07-15T01:39:13,616 Flags : none 2021-07-15T01:39:13,617 Extra checks: none 2021-07-15T01:39:13,617 CPU dispatch : 2021-07-15T01:39:13,617 Requested : 'max -xop -fma4' 2021-07-15T01:39:13,617 Enabled : NEON NEON_FP16 NEON_VFPV4 ASIMD ASIMDHP 2021-07-15T01:39:13,618 Generated : none 2021-07-15T01:39:13,619 CCompilerOpt.cache_flush[804] : write cache to path -> /tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636/build/temp.linux-armv7l-3.9/ccompiler_opt_cache_ext.py 2021-07-15T01:39:13,826 Building wheel for amlearn (setup.py): finished with status 'error' 2021-07-15T01:39:13,827 ERROR: Failed building wheel for amlearn 2021-07-15T01:39:13,828 Running setup.py clean for amlearn 2021-07-15T01:39:13,828 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-i3p_d_rq/amlearn_579398b303f34053bc61e3eb8f3f8636/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-15T01:39:15,408 running clean 2021-07-15T01:39:15,408 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-15T01:39:15,424 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-15T01:39:15,449 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-15T01:39:15,449 'build/scripts.linux-armv7l-3.9' does not exist -- can't clean it 2021-07-15T01:39:15,592 Failed to build amlearn 2021-07-15T01:39:15,593 ERROR: Failed to build one or more wheels 2021-07-15T01:39:15,594 Exception information: 2021-07-15T01:39:15,594 Traceback (most recent call last): 2021-07-15T01:39:15,594 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-15T01:39:15,594 status = self.run(options, args) 2021-07-15T01:39:15,594 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-15T01:39:15,594 return func(self, options, args) 2021-07-15T01:39:15,594 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-15T01:39:15,594 raise CommandError( 2021-07-15T01:39:15,594 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-15T01:39:15,597 Removed build tracker: '/tmp/pip-req-tracker-cr1t0645'