2021-07-15T01:40:49,486 Created temporary directory: /tmp/pip-ephem-wheel-cache-4f7lq7xi 2021-07-15T01:40:49,489 Created temporary directory: /tmp/pip-req-tracker-vn3qcukw 2021-07-15T01:40:49,490 Initialized build tracking at /tmp/pip-req-tracker-vn3qcukw 2021-07-15T01:40:49,490 Created build tracker: /tmp/pip-req-tracker-vn3qcukw 2021-07-15T01:40:49,491 Entered build tracker: /tmp/pip-req-tracker-vn3qcukw 2021-07-15T01:40:49,491 Created temporary directory: /tmp/pip-wheel-tv3r9nak 2021-07-15T01:40:49,523 1 location(s) to search for versions of amlearn: 2021-07-15T01:40:49,523 * https://pypi.org/simple/amlearn/ 2021-07-15T01:40:49,524 Fetching project page and analyzing links: https://pypi.org/simple/amlearn/ 2021-07-15T01:40:49,524 Getting page https://pypi.org/simple/amlearn/ 2021-07-15T01:40:49,526 Found index url https://pypi.org/simple 2021-07-15T01:40:49,625 Found link https://files.pythonhosted.org/packages/5b/37/b16f0e09d837e63766331f1e212eccd32b46da07fa38269be86c0908c613/amlearn-0.0.1rc1.tar.gz#sha256=3feb0259f07d515171eb3f5dbcd60a40a90a2c04b9114be537d617d1df4addee (from https://pypi.org/simple/amlearn/), version: 0.0.1rc1 2021-07-15T01:40:49,625 Found link https://files.pythonhosted.org/packages/c9/69/69f3bd8acf04b6af467a52a212de838bf9cc412724b0197b1523b8703808/amlearn-0.1.0.tar.gz#sha256=20a099bc7da2324c247c1f5bd4c61cbf207ad59248a0c161fac0a08d11112f36 (from https://pypi.org/simple/amlearn/), version: 0.1.0 2021-07-15T01:40:49,626 Found link https://files.pythonhosted.org/packages/d8/26/d78c59d9be85d65e5fae532c317c98f8dc8184831f66a0ae50fc6099e23d/amlearn-0.2.0.tar.gz#sha256=02a6393944cbf8a784db0d554708f37a035c9203518531e46e870bc1453cef7f (from https://pypi.org/simple/amlearn/), version: 0.2.0 2021-07-15T01:40:49,626 Found link https://files.pythonhosted.org/packages/bb/91/5d7bc08da68c418d6a61ba40238d065acafeff63ecd5c802d6bff7790aba/amlearn-0.2.1.tar.gz#sha256=036b1f5f9152145124dc681a3345d518f374c1a8785f602addf4bc27494917f3 (from https://pypi.org/simple/amlearn/), version: 0.2.1 2021-07-15T01:40:49,626 Found link https://files.pythonhosted.org/packages/55/df/26e461638a88a71b48f07abfe48d5bd2e5c20bb3cf3967a8d2e18385a460/amlearn-0.2.2.tar.gz#sha256=1ad6512e2146f4e145e097463f4575427820335c59fca3e6bfb41806c786799d (from https://pypi.org/simple/amlearn/), version: 0.2.2 2021-07-15T01:40:49,627 Found link https://files.pythonhosted.org/packages/80/8b/f29ae904d859e804eb774dd137d0ca7a549737754751446cca2973d301da/amlearn-0.2.3.tar.gz#sha256=5d1ffea09b0267bdfef9ce1d7fcb8340ca8ece762a08885f8aa3be17281aa2b5 (from https://pypi.org/simple/amlearn/), version: 0.2.3 2021-07-15T01:40:49,627 Found link https://files.pythonhosted.org/packages/6f/95/4f17c41fa8c92431ceecc63417552a0cacd918f6fd486fecd5da7c150624/amlearn-0.2.4.tar.gz#sha256=22907a9b4dd8df1858b2336d5b5a163fba110e8ef9d2eb28bba7b28c5133fee2 (from https://pypi.org/simple/amlearn/), version: 0.2.4 2021-07-15T01:40:49,628 Found link https://files.pythonhosted.org/packages/34/b3/b65030f870412ef8adb550da9e3e58e794b61ba08d7bf61920f8448e9a06/amlearn-0.2.5.tar.gz#sha256=da9d07b7f81cc8aa7114bb9fc490c58fefd304dec5478a29816104b8cc3c7e6c (from https://pypi.org/simple/amlearn/), version: 0.2.5 2021-07-15T01:40:49,628 Found link https://files.pythonhosted.org/packages/a5/48/c9242309cea218dd4cccf08cf25320987703b250691f37dc69b5078e0069/amlearn-0.2.6.tar.gz#sha256=e99afe2a58a6f749d7fdce86fb760b9e73911e2966ab5f52d3d6f42fadf887ba (from https://pypi.org/simple/amlearn/), version: 0.2.6 2021-07-15T01:40:49,628 Found link https://files.pythonhosted.org/packages/9b/3a/482db82334f7cef1d3d61de69919813a75396692267a1d277378fff90b15/amlearn-0.3.1.tar.gz#sha256=c0fa0da13a6313d767f9f752ccdad3ab97fe4adba1ad74a7f1a138093796d1a2 (from https://pypi.org/simple/amlearn/), version: 0.3.1 2021-07-15T01:40:49,629 Found link https://files.pythonhosted.org/packages/72/50/8891e4d0dc140c1e7b362e8045c01b8e86415bcb951e701e974776f4dc94/amlearn-0.3.2.tar.gz#sha256=752577af6877785f9b335816d6f6f4b08dcd9755c4170b619bb10d9666304a7e (from https://pypi.org/simple/amlearn/), version: 0.3.2 2021-07-15T01:40:49,629 Found link https://files.pythonhosted.org/packages/e2/26/2df8cbc6aa583a9f7196ebe4bf76b969260a39c0dd91cd1961b67d0ae984/amlearn-0.3.3.tar.gz#sha256=f180e4f9cbcc0839eea4c86823b319ffd4e793b63997712fe99c9f163ca94e9d (from https://pypi.org/simple/amlearn/), version: 0.3.3 2021-07-15T01:40:49,629 Found link https://files.pythonhosted.org/packages/80/95/ed6fd2b47ba6b38590fa63a50fbdd07945f8d234c4e32f2f0a3558fd27b9/amlearn-0.3.4.tar.gz#sha256=35b993401f1b75cf97104aec6aca3f1c5d2d89dc7a991d18d2f60412f36ca428 (from https://pypi.org/simple/amlearn/), version: 0.3.4 2021-07-15T01:40:49,630 Skipping link: not a file: https://pypi.org/simple/amlearn/ 2021-07-15T01:40:49,650 Given no hashes to check 1 links for project 'amlearn': discarding no candidates 2021-07-15T01:40:49,671 Collecting amlearn==0.2.2 2021-07-15T01:40:49,672 Created temporary directory: /tmp/pip-unpack-cg0x419i 2021-07-15T01:40:49,880 Downloading amlearn-0.2.2.tar.gz (82 kB) 2021-07-15T01:40:50,097 Added amlearn==0.2.2 from https://files.pythonhosted.org/packages/55/df/26e461638a88a71b48f07abfe48d5bd2e5c20bb3cf3967a8d2e18385a460/amlearn-0.2.2.tar.gz#sha256=1ad6512e2146f4e145e097463f4575427820335c59fca3e6bfb41806c786799d to build tracker '/tmp/pip-req-tracker-vn3qcukw' 2021-07-15T01:40:50,098 Running setup.py (path:/tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3/setup.py) egg_info for package amlearn 2021-07-15T01:40:50,099 Created temporary directory: /tmp/pip-pip-egg-info-qdm95fw2 2021-07-15T01:40:50,100 Running command python setup.py egg_info 2021-07-15T01:40:51,855 running egg_info 2021-07-15T01:40:51,857 running build_src 2021-07-15T01:40:51,860 build_src 2021-07-15T01:40:51,860 building extension "amlearn.featurize.src.utils" sources 2021-07-15T01:40:51,860 f2py options: [] 2021-07-15T01:40:51,861 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c 2021-07-15T01:40:51,861 creating build 2021-07-15T01:40:51,861 creating build/src.linux-armv7l-3.9 2021-07-15T01:40:51,862 creating build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:40:51,863 creating build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:51,864 creating build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:40:52,077 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:52,079 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:52,080 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:52,080 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:52,123 appenddecl: "dimension" not implemented. 2021-07-15T01:40:52,137 appenddecl: "dimension" not implemented. 2021-07-15T01:40:52,141 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:52,142 appenddecl: "dimension" not implemented. 2021-07-15T01:40:52,368 Reading fortran codes... 2021-07-15T01:40:52,368 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:52,369 Post-processing... 2021-07-15T01:40:52,369 Block: utils 2021-07-15T01:40:52,369 Block: determinant_func 2021-07-15T01:40:52,369 Block: determinant 2021-07-15T01:40:52,369 Block: distance 2021-07-15T01:40:52,369 Block: distance_info 2021-07-15T01:40:52,369 Block: quicksort 2021-07-15T01:40:52,370 Block: quick_sort 2021-07-15T01:40:52,370 Block: cg_function 2021-07-15T01:40:52,370 Block: calculate_cg 2021-07-15T01:40:52,370 Block: angle 2021-07-15T01:40:52,370 Block: angle_info 2021-07-15T01:40:52,370 Block: c_stats 2021-07-15T01:40:52,370 Block: customize_stats 2021-07-15T01:40:52,371 Block: a_stats 2021-07-15T01:40:52,371 Block: all_stats 2021-07-15T01:40:52,371 Post-processing (stage 2)... 2021-07-15T01:40:52,371 Block: utils 2021-07-15T01:40:52,371 Block: unknown_interface 2021-07-15T01:40:52,371 Block: determinant_func 2021-07-15T01:40:52,371 Block: determinant 2021-07-15T01:40:52,372 Block: distance 2021-07-15T01:40:52,372 Block: distance_info 2021-07-15T01:40:52,372 Block: quicksort 2021-07-15T01:40:52,372 Block: quick_sort 2021-07-15T01:40:52,372 Block: cg_function 2021-07-15T01:40:52,372 Block: calculate_cg 2021-07-15T01:40:52,372 Block: angle 2021-07-15T01:40:52,372 Block: angle_info 2021-07-15T01:40:52,373 Block: c_stats 2021-07-15T01:40:52,373 Block: customize_stats 2021-07-15T01:40:52,373 Block: a_stats 2021-07-15T01:40:52,373 Block: all_stats 2021-07-15T01:40:52,373 Building modules... 2021-07-15T01:40:52,373 Building module "utils"... 2021-07-15T01:40:52,373 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:52,374 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:52,374 deter_value = determinant(matrix) 2021-07-15T01:40:52,374 Constructing F90 module support for "distance"... 2021-07-15T01:40:52,374 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:52,374 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:52,374 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:52,374 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:52,375 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:52,375 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:52,375 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:52,375 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:52,375 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:52,375 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:52,376 Constructing F90 module support for "angle"... 2021-07-15T01:40:52,376 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:52,376 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:52,376 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:52,376 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:52,376 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:52,376 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:52,377 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:52,377 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:52,377 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:52,377 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:52,377 Wrote C/API module "utils" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c" 2021-07-15T01:40:52,377 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/utils-f2pywrappers2.f90" 2021-07-15T01:40:52,378 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:52,378 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:52,378 creating build/src.linux-armv7l-3.9/build 2021-07-15T01:40:52,378 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-15T01:40:52,378 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:40:52,378 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:52,378 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:40:52,379 copying /home/piwheels/.local/lib/python3.9/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:40:52,379 copying /home/piwheels/.local/lib/python3.9/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:40:52,381 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/utils-f2pywrappers2.f90' to sources. 2021-07-15T01:40:52,381 building extension "amlearn.featurize.src.voronoi_nn" sources 2021-07-15T01:40:52,381 f2py options: [] 2021-07-15T01:40:52,381 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nnmodule.c 2021-07-15T01:40:52,590 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:52,592 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:52,593 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:52,593 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:52,649 appenddecl: "dimension" not implemented. 2021-07-15T01:40:52,656 appenddecl: "dimension" not implemented. 2021-07-15T01:40:52,659 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:52,660 appenddecl: "dimension" not implemented. 2021-07-15T01:40:52,980 Reading fortran codes... 2021-07-15T01:40:52,980 Reading file 'amlearn/featurize/src/voronoi_nn.f90' (format:free) 2021-07-15T01:40:52,980 {'before': '', 'this': 'use', 'after': ':: distance '} 2021-07-15T01:40:52,980 Line #49 in amlearn/featurize/src/voronoi_nn.f90:" use :: distance " 2021-07-15T01:40:52,981 analyzeline: Could not crack the use statement. 2021-07-15T01:40:52,981 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:52,981 Post-processing... 2021-07-15T01:40:52,981 Block: voronoi_nn 2021-07-15T01:40:52,981 Block: determinant 2021-07-15T01:40:52,981 Block: voronoi 2021-07-15T01:40:52,982 Block: determinant_func 2021-07-15T01:40:52,982 Block: determinant 2021-07-15T01:40:52,982 Block: distance 2021-07-15T01:40:52,982 Block: distance_info 2021-07-15T01:40:52,982 Block: quicksort 2021-07-15T01:40:52,982 Block: quick_sort 2021-07-15T01:40:52,982 Block: cg_function 2021-07-15T01:40:52,983 Block: calculate_cg 2021-07-15T01:40:52,983 Block: angle 2021-07-15T01:40:52,983 Block: angle_info 2021-07-15T01:40:52,983 Block: c_stats 2021-07-15T01:40:52,983 Block: customize_stats 2021-07-15T01:40:52,983 Block: a_stats 2021-07-15T01:40:52,983 Block: all_stats 2021-07-15T01:40:52,984 Post-processing (stage 2)... 2021-07-15T01:40:52,984 Block: voronoi_nn 2021-07-15T01:40:52,984 Block: unknown_interface 2021-07-15T01:40:52,984 Block: determinant 2021-07-15T01:40:52,984 Block: voronoi 2021-07-15T01:40:52,984 Block: determinant_func 2021-07-15T01:40:52,985 Block: determinant 2021-07-15T01:40:52,985 Block: distance 2021-07-15T01:40:52,985 Block: distance_info 2021-07-15T01:40:52,985 Block: quicksort 2021-07-15T01:40:52,985 Block: quick_sort 2021-07-15T01:40:52,985 Block: cg_function 2021-07-15T01:40:52,985 Block: calculate_cg 2021-07-15T01:40:52,986 Block: angle 2021-07-15T01:40:52,986 Block: angle_info 2021-07-15T01:40:52,986 Block: c_stats 2021-07-15T01:40:52,986 Block: customize_stats 2021-07-15T01:40:52,986 Block: a_stats 2021-07-15T01:40:52,986 Block: all_stats 2021-07-15T01:40:52,986 Building modules... 2021-07-15T01:40:52,987 Building module "voronoi_nn"... 2021-07-15T01:40:52,987 Constructing wrapper function "determinant"... 2021-07-15T01:40:52,987 deter_value = determinant(face) 2021-07-15T01:40:52,987 Constructing wrapper function "voronoi"... 2021-07-15T01:40:52,987 n_neighbor_list,neighbor_lists,neighbor_area_lists,neighbor_vol_lists,neighbor_distance_lists,neighbor_edge_lists,n_neighbor_max,n_edge_max = voronoi(atom_type,atom_coords,cutoff,allow_neighbor_limit,small_face_thres,pbc,bds,n_neighbor_list,neighbor_lists,neighbor_area_lists,neighbor_vol_lists,neighbor_distance_lists,neighbor_edge_lists,n_neighbor_max,n_edge_max,[n_atoms,n_neighbor_limit]) 2021-07-15T01:40:52,987 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:52,987 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:52,988 deter_value = determinant(matrix) 2021-07-15T01:40:52,988 Constructing F90 module support for "distance"... 2021-07-15T01:40:52,988 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:52,988 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:52,988 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:52,988 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:52,988 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:52,989 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:52,989 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:52,989 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:52,989 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:52,989 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:52,989 Constructing F90 module support for "angle"... 2021-07-15T01:40:52,989 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:52,989 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:52,990 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:52,990 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:52,990 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:52,990 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:52,990 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:52,990 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:52,990 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:52,990 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:52,991 Wrote C/API module "voronoi_nn" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nnmodule.c" 2021-07-15T01:40:52,991 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nn-f2pywrappers2.f90" 2021-07-15T01:40:52,991 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:52,991 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:52,991 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:40:52,991 building extension "amlearn.featurize.src.voronoi_stats" sources 2021-07-15T01:40:52,992 f2py options: [] 2021-07-15T01:40:52,992 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_statsmodule.c 2021-07-15T01:40:53,211 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:53,213 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:53,214 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:53,214 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:53,260 sortvarnames: failed to compute dependencies because of cyclic dependencies between target_voro_idx, voronoi_index_list, motif_one_hot, n_voro, n_target, n_atoms 2021-07-15T01:40:53,330 appenddecl: "dimension" not implemented. 2021-07-15T01:40:53,343 appenddecl: "dimension" not implemented. 2021-07-15T01:40:53,347 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:53,348 appenddecl: "dimension" not implemented. 2021-07-15T01:40:54,015 Reading fortran codes... 2021-07-15T01:40:54,015 Reading file 'amlearn/featurize/src/voronoi_stats.f90' (format:free) 2021-07-15T01:40:54,015 {'before': '', 'this': 'use', 'after': ':: a_stats, only: all_stats '} 2021-07-15T01:40:54,016 Line #205 in amlearn/featurize/src/voronoi_stats.f90:" use :: a_stats, only: all_stats " 2021-07-15T01:40:54,016 analyzeline: Could not crack the use statement. 2021-07-15T01:40:54,016 {'before': '', 'this': 'use', 'after': ':: a_stats, only: all_stats '} 2021-07-15T01:40:54,016 Line #230 in amlearn/featurize/src/voronoi_stats.f90:" use :: a_stats, only: all_stats " 2021-07-15T01:40:54,016 analyzeline: Could not crack the use statement. 2021-07-15T01:40:54,016 {'before': '', 'this': 'use', 'after': ':: a_stats, only : all_stats '} 2021-07-15T01:40:54,016 Line #318 in amlearn/featurize/src/voronoi_stats.f90:" use :: a_stats, only : all_stats " 2021-07-15T01:40:54,017 analyzeline: Could not crack the use statement. 2021-07-15T01:40:54,017 {'before': '', 'this': 'use', 'after': ':: c_stats, only : customize_stats '} 2021-07-15T01:40:54,017 Line #320 in amlearn/featurize/src/voronoi_stats.f90:" use :: c_stats, only : customize_stats " 2021-07-15T01:40:54,017 analyzeline: Could not crack the use statement. 2021-07-15T01:40:54,017 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:54,017 Post-processing... 2021-07-15T01:40:54,018 Block: voronoi_stats 2021-07-15T01:40:54,018 Block: voronoi_index 2021-07-15T01:40:54,018 Block: i_fold_symmetry 2021-07-15T01:40:54,018 Block: line_percent 2021-07-15T01:40:54,018 {} 2021-07-15T01:40:54,018 In: :voronoi_stats:amlearn/featurize/src/voronoi_stats.f90:character_motif 2021-07-15T01:40:54,018 vars2fortran: No typespec for argument "n_voro". 2021-07-15T01:40:54,019 {} 2021-07-15T01:40:54,019 In: :voronoi_stats:amlearn/featurize/src/voronoi_stats.f90:character_motif 2021-07-15T01:40:54,019 vars2fortran: No typespec for argument "n_target". 2021-07-15T01:40:54,019 Block: character_motif 2021-07-15T01:40:54,019 Block: area_wt_i_fold_symmetry 2021-07-15T01:40:54,019 Block: vol_wt_i_fold_symmetry 2021-07-15T01:40:54,020 Block: voronoi_area_stats 2021-07-15T01:40:54,020 Block: voronoi_area_stats_separate 2021-07-15T01:40:54,020 Block: voronoi_vol_stats 2021-07-15T01:40:54,020 Block: voronoi_vol_stats_separate 2021-07-15T01:40:54,020 Block: voronoi_distance_stats 2021-07-15T01:40:54,020 Block: determinant_func 2021-07-15T01:40:54,020 Block: determinant 2021-07-15T01:40:54,021 Block: distance 2021-07-15T01:40:54,021 Block: distance_info 2021-07-15T01:40:54,021 Block: quicksort 2021-07-15T01:40:54,021 Block: quick_sort 2021-07-15T01:40:54,021 Block: cg_function 2021-07-15T01:40:54,021 Block: calculate_cg 2021-07-15T01:40:54,021 Block: angle 2021-07-15T01:40:54,022 Block: angle_info 2021-07-15T01:40:54,022 Block: c_stats 2021-07-15T01:40:54,022 Block: customize_stats 2021-07-15T01:40:54,022 Block: a_stats 2021-07-15T01:40:54,022 Block: all_stats 2021-07-15T01:40:54,022 Post-processing (stage 2)... 2021-07-15T01:40:54,023 Block: voronoi_stats 2021-07-15T01:40:54,023 Block: unknown_interface 2021-07-15T01:40:54,023 Block: voronoi_index 2021-07-15T01:40:54,023 Block: i_fold_symmetry 2021-07-15T01:40:54,023 Block: line_percent 2021-07-15T01:40:54,023 Block: character_motif 2021-07-15T01:40:54,023 Block: area_wt_i_fold_symmetry 2021-07-15T01:40:54,024 Block: vol_wt_i_fold_symmetry 2021-07-15T01:40:54,024 Block: voronoi_area_stats 2021-07-15T01:40:54,024 Block: voronoi_area_stats_separate 2021-07-15T01:40:54,024 Block: voronoi_vol_stats 2021-07-15T01:40:54,024 Block: voronoi_vol_stats_separate 2021-07-15T01:40:54,024 Block: voronoi_distance_stats 2021-07-15T01:40:54,024 Block: determinant_func 2021-07-15T01:40:54,025 Block: determinant 2021-07-15T01:40:54,025 Block: distance 2021-07-15T01:40:54,025 Block: distance_info 2021-07-15T01:40:54,025 Block: quicksort 2021-07-15T01:40:54,025 Block: quick_sort 2021-07-15T01:40:54,025 Block: cg_function 2021-07-15T01:40:54,026 Block: calculate_cg 2021-07-15T01:40:54,026 Block: angle 2021-07-15T01:40:54,026 Block: angle_info 2021-07-15T01:40:54,026 Block: c_stats 2021-07-15T01:40:54,026 Block: customize_stats 2021-07-15T01:40:54,026 Block: a_stats 2021-07-15T01:40:54,027 Block: all_stats 2021-07-15T01:40:54,027 Building modules... 2021-07-15T01:40:54,027 Building module "voronoi_stats"... 2021-07-15T01:40:54,027 Constructing wrapper function "voronoi_index"... 2021-07-15T01:40:54,027 voronoi_index_list = voronoi_index(voronoi_index_list,n_neighbor_list,neighbor_edge_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,027 Constructing wrapper function "i_fold_symmetry"... 2021-07-15T01:40:54,027 i_symm_list = i_fold_symmetry(i_symm_list,n_neighbor_list,neighbor_edge_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,028 Constructing wrapper function "line_percent"... 2021-07-15T01:40:54,028 percent_list = line_percent(percent_list,value_list,[n_atoms,n_values]) 2021-07-15T01:40:54,028 Constructing wrapper function "character_motif"... 2021-07-15T01:40:54,028 motif_one_hot = character_motif(motif_one_hot,voronoi_index_list,edge_min,target_voro_idx,frank_kasper,[n_atoms,n_voro,n_target]) 2021-07-15T01:40:54,028 Constructing wrapper function "area_wt_i_fold_symmetry"... 2021-07-15T01:40:54,028 area_wt_i_symm_list = area_wt_i_fold_symmetry(area_wt_i_symm_list,n_neighbor_list,neighbor_edge_lists,neighbor_area_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,028 Constructing wrapper function "vol_wt_i_fold_symmetry"... 2021-07-15T01:40:54,029 vol_wt_i_symm_list = vol_wt_i_fold_symmetry(vol_wt_i_symm_list,n_neighbor_list,neighbor_edge_lists,neighbor_vol_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,029 Constructing wrapper function "voronoi_area_stats"... 2021-07-15T01:40:54,029 area_stats = voronoi_area_stats(area_stats,n_neighbor_list,neighbor_area_lists,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,029 Constructing wrapper function "voronoi_area_stats_separate"... 2021-07-15T01:40:54,029 area_stats_separate = voronoi_area_stats_separate(area_stats_separate,n_neighbor_list,neighbor_edge_lists,neighbor_area_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,029 Constructing wrapper function "voronoi_vol_stats"... 2021-07-15T01:40:54,029 vol_stats = voronoi_vol_stats(vol_stats,n_neighbor_list,neighbor_vol_lists,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,030 Constructing wrapper function "voronoi_vol_stats_separate"... 2021-07-15T01:40:54,030 vol_stats_separate = voronoi_vol_stats_separate(vol_stats_separate,n_neighbor_list,neighbor_edge_lists,neighbor_vol_lists,edge_min,edge_max,include_beyond_edge_max,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,030 Constructing wrapper function "voronoi_distance_stats"... 2021-07-15T01:40:54,030 distance_stats = voronoi_distance_stats(distance_stats,n_neighbor_list,neighbor_distance_lists,[n_atoms,neighbor_num_limit]) 2021-07-15T01:40:54,030 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:54,030 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:54,031 deter_value = determinant(matrix) 2021-07-15T01:40:54,031 Constructing F90 module support for "distance"... 2021-07-15T01:40:54,031 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:54,031 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:54,031 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:54,031 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:54,032 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:54,032 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:54,032 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:54,032 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:54,032 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:54,032 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:54,032 Constructing F90 module support for "angle"... 2021-07-15T01:40:54,033 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:54,033 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:54,033 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:54,033 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:54,033 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:54,033 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:54,033 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:54,034 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:54,034 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:54,034 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:54,034 Wrote C/API module "voronoi_stats" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_statsmodule.c" 2021-07-15T01:40:54,034 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_stats-f2pywrappers2.f90" 2021-07-15T01:40:54,034 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:54,035 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:54,035 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:40:54,035 building extension "amlearn.featurize.src.boop" sources 2021-07-15T01:40:54,035 f2py options: [] 2021-07-15T01:40:54,035 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/boopmodule.c 2021-07-15T01:40:54,392 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:54,393 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:54,394 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:54,394 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:54,445 appenddecl: "dimension" not implemented. 2021-07-15T01:40:54,453 appenddecl: "dimension" not implemented. 2021-07-15T01:40:54,456 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:54,457 appenddecl: "dimension" not implemented. 2021-07-15T01:40:54,746 Reading fortran codes... 2021-07-15T01:40:54,746 Reading file 'amlearn/featurize/src/boop.f90' (format:free) 2021-07-15T01:40:54,746 {'before': '', 'this': 'use', 'after': ':: angle '} 2021-07-15T01:40:54,746 Line #9 in amlearn/featurize/src/boop.f90:" use :: angle " 2021-07-15T01:40:54,747 analyzeline: Could not crack the use statement. 2021-07-15T01:40:54,747 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:54,747 Post-processing... 2021-07-15T01:40:54,747 Block: boop 2021-07-15T01:40:54,747 Block: calculate_boop 2021-07-15T01:40:54,748 Block: determinant_func 2021-07-15T01:40:54,748 Block: determinant 2021-07-15T01:40:54,748 Block: distance 2021-07-15T01:40:54,748 Block: distance_info 2021-07-15T01:40:54,748 Block: quicksort 2021-07-15T01:40:54,749 Block: quick_sort 2021-07-15T01:40:54,749 Block: cg_function 2021-07-15T01:40:54,749 Block: calculate_cg 2021-07-15T01:40:54,749 Block: angle 2021-07-15T01:40:54,749 Block: angle_info 2021-07-15T01:40:54,750 Block: c_stats 2021-07-15T01:40:54,750 Block: customize_stats 2021-07-15T01:40:54,750 Block: a_stats 2021-07-15T01:40:54,750 Block: all_stats 2021-07-15T01:40:54,750 Post-processing (stage 2)... 2021-07-15T01:40:54,751 Block: boop 2021-07-15T01:40:54,751 Block: unknown_interface 2021-07-15T01:40:54,751 Block: calculate_boop 2021-07-15T01:40:54,751 Block: determinant_func 2021-07-15T01:40:54,751 Block: determinant 2021-07-15T01:40:54,751 Block: distance 2021-07-15T01:40:54,752 Block: distance_info 2021-07-15T01:40:54,752 Block: quicksort 2021-07-15T01:40:54,752 Block: quick_sort 2021-07-15T01:40:54,752 Block: cg_function 2021-07-15T01:40:54,752 Block: calculate_cg 2021-07-15T01:40:54,753 Block: angle 2021-07-15T01:40:54,753 Block: angle_info 2021-07-15T01:40:54,753 Block: c_stats 2021-07-15T01:40:54,753 Block: customize_stats 2021-07-15T01:40:54,753 Block: a_stats 2021-07-15T01:40:54,753 Block: all_stats 2021-07-15T01:40:54,754 Building modules... 2021-07-15T01:40:54,754 Building module "boop"... 2021-07-15T01:40:54,754 Constructing wrapper function "calculate_boop"... 2021-07-15T01:40:54,754 ql,wlbar,coarse_ql,coarse_wlbar = calculate_boop(atom_coords,pbc,bds,n_neighbor_list,neighbor_lists,low_order,higher_order,coarse_lower_order,coarse_higher_order,ql,wlbar,coarse_ql,coarse_wlbar,[n_atoms,n_neighbor_limit]) 2021-07-15T01:40:54,754 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:54,755 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:54,755 deter_value = determinant(matrix) 2021-07-15T01:40:54,755 Constructing F90 module support for "distance"... 2021-07-15T01:40:54,755 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:54,755 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:54,755 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:54,756 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:54,756 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:54,756 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:54,756 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:54,756 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:54,756 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:54,757 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:54,757 Constructing F90 module support for "angle"... 2021-07-15T01:40:54,757 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:54,757 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:54,757 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:54,758 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:54,758 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:54,758 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:54,758 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:54,758 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:54,758 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:54,759 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:54,759 Wrote C/API module "boop" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/boopmodule.c" 2021-07-15T01:40:54,759 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/boop-f2pywrappers2.f90" 2021-07-15T01:40:54,759 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:54,759 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:54,760 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/boop-f2pywrappers2.f90' to sources. 2021-07-15T01:40:54,760 building extension "amlearn.featurize.src.mro_stats" sources 2021-07-15T01:40:54,760 f2py options: [] 2021-07-15T01:40:54,760 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_statsmodule.c 2021-07-15T01:40:54,858 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:54,860 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:54,861 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:54,861 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:54,907 appenddecl: "dimension" not implemented. 2021-07-15T01:40:54,920 appenddecl: "dimension" not implemented. 2021-07-15T01:40:54,924 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:54,926 appenddecl: "dimension" not implemented. 2021-07-15T01:40:55,184 Reading fortran codes... 2021-07-15T01:40:55,184 Reading file 'amlearn/featurize/src/mro_stats.f90' (format:free) 2021-07-15T01:40:55,185 {'before': '', 'this': 'use', 'after': ':: c_stats '} 2021-07-15T01:40:55,185 Line #5 in amlearn/featurize/src/mro_stats.f90:" use :: c_stats " 2021-07-15T01:40:55,185 analyzeline: Could not crack the use statement. 2021-07-15T01:40:55,185 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:55,185 Post-processing... 2021-07-15T01:40:55,185 Block: mro_stats 2021-07-15T01:40:55,186 {'attrspec': ['intent(in)']} 2021-07-15T01:40:55,186 In: :mro_stats:amlearn/featurize/src/mro_stats.f90:sro_to_mro 2021-07-15T01:40:55,186 vars2fortran: No typespec for argument "n_neighbor_limit". 2021-07-15T01:40:55,186 Block: sro_to_mro 2021-07-15T01:40:55,186 Block: determinant_func 2021-07-15T01:40:55,187 Block: determinant 2021-07-15T01:40:55,187 Block: distance 2021-07-15T01:40:55,187 Block: distance_info 2021-07-15T01:40:55,187 Block: quicksort 2021-07-15T01:40:55,187 Block: quick_sort 2021-07-15T01:40:55,188 Block: cg_function 2021-07-15T01:40:55,188 Block: calculate_cg 2021-07-15T01:40:55,188 Block: angle 2021-07-15T01:40:55,188 Block: angle_info 2021-07-15T01:40:55,188 Block: c_stats 2021-07-15T01:40:55,188 Block: customize_stats 2021-07-15T01:40:55,189 Block: a_stats 2021-07-15T01:40:55,189 Block: all_stats 2021-07-15T01:40:55,189 Post-processing (stage 2)... 2021-07-15T01:40:55,189 Block: mro_stats 2021-07-15T01:40:55,189 Block: unknown_interface 2021-07-15T01:40:55,189 Block: sro_to_mro 2021-07-15T01:40:55,190 Block: determinant_func 2021-07-15T01:40:55,190 Block: determinant 2021-07-15T01:40:55,190 Block: distance 2021-07-15T01:40:55,190 Block: distance_info 2021-07-15T01:40:55,190 Block: quicksort 2021-07-15T01:40:55,190 Block: quick_sort 2021-07-15T01:40:55,191 Block: cg_function 2021-07-15T01:40:55,191 Block: calculate_cg 2021-07-15T01:40:55,191 Block: angle 2021-07-15T01:40:55,191 Block: angle_info 2021-07-15T01:40:55,191 Block: c_stats 2021-07-15T01:40:55,191 Block: customize_stats 2021-07-15T01:40:55,192 Block: a_stats 2021-07-15T01:40:55,192 Block: all_stats 2021-07-15T01:40:55,192 Building modules... 2021-07-15T01:40:55,192 Building module "mro_stats"... 2021-07-15T01:40:55,192 Constructing wrapper function "sro_to_mro"... 2021-07-15T01:40:55,192 mro_feature = sro_to_mro(sro_feature,n_neighbor_list,neighbor_lists,stats_types,mro_feature,[n_atoms,n_neighbor_limit,sum_stats_types]) 2021-07-15T01:40:55,193 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:55,193 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:55,193 deter_value = determinant(matrix) 2021-07-15T01:40:55,193 Constructing F90 module support for "distance"... 2021-07-15T01:40:55,193 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:55,193 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:55,194 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:55,194 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:55,194 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:55,194 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:55,194 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:55,194 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:55,195 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:55,195 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:55,195 Constructing F90 module support for "angle"... 2021-07-15T01:40:55,195 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:55,195 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:55,195 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:55,196 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:55,196 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:55,196 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:55,196 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:55,196 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:55,196 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:55,197 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:55,197 Wrote C/API module "mro_stats" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_statsmodule.c" 2021-07-15T01:40:55,197 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_stats-f2pywrappers2.f90" 2021-07-15T01:40:55,197 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:55,197 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:55,197 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:40:55,198 building extension "amlearn.featurize.src.neighbor_data" sources 2021-07-15T01:40:55,198 f2py options: [] 2021-07-15T01:40:55,198 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_datamodule.c 2021-07-15T01:40:55,308 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:55,310 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:55,310 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:55,311 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:55,343 appenddecl: "dimension" not implemented. 2021-07-15T01:40:55,351 appenddecl: "dimension" not implemented. 2021-07-15T01:40:55,353 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:55,354 appenddecl: "dimension" not implemented. 2021-07-15T01:40:55,618 Reading fortran codes... 2021-07-15T01:40:55,619 Reading file 'amlearn/featurize/src/neighbor_data.f90' (format:free) 2021-07-15T01:40:55,619 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:55,619 Post-processing... 2021-07-15T01:40:55,619 Block: neighbor_data 2021-07-15T01:40:55,619 Block: add_neighbor_features 2021-07-15T01:40:55,619 Block: determinant_func 2021-07-15T01:40:55,620 Block: determinant 2021-07-15T01:40:55,620 Block: distance 2021-07-15T01:40:55,620 Block: distance_info 2021-07-15T01:40:55,620 Block: quicksort 2021-07-15T01:40:55,620 Block: quick_sort 2021-07-15T01:40:55,620 Block: cg_function 2021-07-15T01:40:55,620 Block: calculate_cg 2021-07-15T01:40:55,621 Block: angle 2021-07-15T01:40:55,621 Block: angle_info 2021-07-15T01:40:55,621 Block: c_stats 2021-07-15T01:40:55,621 Block: customize_stats 2021-07-15T01:40:55,621 Block: a_stats 2021-07-15T01:40:55,621 Block: all_stats 2021-07-15T01:40:55,621 Post-processing (stage 2)... 2021-07-15T01:40:55,622 Block: neighbor_data 2021-07-15T01:40:55,622 Block: unknown_interface 2021-07-15T01:40:55,622 Block: add_neighbor_features 2021-07-15T01:40:55,622 Block: determinant_func 2021-07-15T01:40:55,622 Block: determinant 2021-07-15T01:40:55,622 Block: distance 2021-07-15T01:40:55,622 Block: distance_info 2021-07-15T01:40:55,623 Block: quicksort 2021-07-15T01:40:55,623 Block: quick_sort 2021-07-15T01:40:55,623 Block: cg_function 2021-07-15T01:40:55,623 Block: calculate_cg 2021-07-15T01:40:55,623 Block: angle 2021-07-15T01:40:55,623 Block: angle_info 2021-07-15T01:40:55,623 Block: c_stats 2021-07-15T01:40:55,624 Block: customize_stats 2021-07-15T01:40:55,624 Block: a_stats 2021-07-15T01:40:55,624 Block: all_stats 2021-07-15T01:40:55,624 Building modules... 2021-07-15T01:40:55,624 Building module "neighbor_data"... 2021-07-15T01:40:55,624 Constructing wrapper function "add_neighbor_features"... 2021-07-15T01:40:55,624 features_new = add_neighbor_features(pred_last,neigh_voro,probs,features_new,[n_atoms,n_neighs,n_probs,n_features]) 2021-07-15T01:40:55,625 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:55,625 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:55,625 deter_value = determinant(matrix) 2021-07-15T01:40:55,625 Constructing F90 module support for "distance"... 2021-07-15T01:40:55,625 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:55,625 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:55,625 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:55,626 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:55,626 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:55,626 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:55,626 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:55,626 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:55,626 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:55,626 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:55,627 Constructing F90 module support for "angle"... 2021-07-15T01:40:55,627 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:55,627 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:55,627 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:55,627 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:55,627 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:55,627 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:55,628 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:55,628 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:55,628 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:55,628 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:55,628 Wrote C/API module "neighbor_data" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_datamodule.c" 2021-07-15T01:40:55,628 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_data-f2pywrappers2.f90" 2021-07-15T01:40:55,629 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:55,629 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:55,629 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_data-f2pywrappers2.f90' to sources. 2021-07-15T01:40:55,629 building extension "amlearn.featurize.src.distance_stats" sources 2021-07-15T01:40:55,629 f2py options: [] 2021-07-15T01:40:55,629 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_statsmodule.c 2021-07-15T01:40:55,753 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:55,755 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:55,756 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:55,756 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:55,795 appenddecl: "dimension" not implemented. 2021-07-15T01:40:55,803 appenddecl: "dimension" not implemented. 2021-07-15T01:40:55,806 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:55,808 appenddecl: "dimension" not implemented. 2021-07-15T01:40:56,104 Reading fortran codes... 2021-07-15T01:40:56,105 Reading file 'amlearn/featurize/src/distance_stats.f90' (format:free) 2021-07-15T01:40:56,105 {'before': '', 'this': 'use', 'after': ':: a_stats '} 2021-07-15T01:40:56,105 Line #17 in amlearn/featurize/src/distance_stats.f90:" use :: a_stats " 2021-07-15T01:40:56,105 analyzeline: Could not crack the use statement. 2021-07-15T01:40:56,105 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:56,105 Post-processing... 2021-07-15T01:40:56,106 Block: distance_stats 2021-07-15T01:40:56,106 Block: cn_dist 2021-07-15T01:40:56,106 Block: cutoff_distance_stats 2021-07-15T01:40:56,106 Block: determinant_func 2021-07-15T01:40:56,106 Block: determinant 2021-07-15T01:40:56,106 Block: distance 2021-07-15T01:40:56,106 Block: distance_info 2021-07-15T01:40:56,107 Block: quicksort 2021-07-15T01:40:56,107 Block: quick_sort 2021-07-15T01:40:56,107 Block: cg_function 2021-07-15T01:40:56,107 Block: calculate_cg 2021-07-15T01:40:56,107 Block: angle 2021-07-15T01:40:56,107 Block: angle_info 2021-07-15T01:40:56,107 Block: c_stats 2021-07-15T01:40:56,107 Block: customize_stats 2021-07-15T01:40:56,108 Block: a_stats 2021-07-15T01:40:56,108 Block: all_stats 2021-07-15T01:40:56,108 Post-processing (stage 2)... 2021-07-15T01:40:56,108 Block: distance_stats 2021-07-15T01:40:56,108 Block: unknown_interface 2021-07-15T01:40:56,108 Block: cn_dist 2021-07-15T01:40:56,108 Block: cutoff_distance_stats 2021-07-15T01:40:56,109 Block: determinant_func 2021-07-15T01:40:56,109 Block: determinant 2021-07-15T01:40:56,109 Block: distance 2021-07-15T01:40:56,109 Block: distance_info 2021-07-15T01:40:56,109 Block: quicksort 2021-07-15T01:40:56,109 Block: quick_sort 2021-07-15T01:40:56,109 Block: cg_function 2021-07-15T01:40:56,110 Block: calculate_cg 2021-07-15T01:40:56,110 Block: angle 2021-07-15T01:40:56,110 Block: angle_info 2021-07-15T01:40:56,110 Block: c_stats 2021-07-15T01:40:56,110 Block: customize_stats 2021-07-15T01:40:56,110 Block: a_stats 2021-07-15T01:40:56,110 Block: all_stats 2021-07-15T01:40:56,111 Building modules... 2021-07-15T01:40:56,111 Building module "distance_stats"... 2021-07-15T01:40:56,111 Constructing wrapper function "cn_dist"... 2021-07-15T01:40:56,111 cn = cn_dist(n_neighbor_list) 2021-07-15T01:40:56,111 Constructing wrapper function "cutoff_distance_stats"... 2021-07-15T01:40:56,111 cutoff_distance_stats(distance_stats,n_neighbor_list,neighbor_distance_lists,[n_atoms,n_neighbor_limit]) 2021-07-15T01:40:56,111 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:56,111 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:56,112 deter_value = determinant(matrix) 2021-07-15T01:40:56,112 Constructing F90 module support for "distance"... 2021-07-15T01:40:56,112 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:56,112 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:56,112 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:56,112 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:56,112 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:56,113 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:56,113 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:56,113 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:56,113 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:56,113 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:56,113 Constructing F90 module support for "angle"... 2021-07-15T01:40:56,113 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:56,113 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:56,114 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:56,114 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:56,114 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:56,114 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:56,114 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:56,114 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:56,115 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:56,115 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:56,115 Wrote C/API module "distance_stats" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_statsmodule.c" 2021-07-15T01:40:56,115 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_stats-f2pywrappers2.f90" 2021-07-15T01:40:56,115 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:56,115 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:56,115 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:40:56,116 building extension "amlearn.featurize.src.distance_nn" sources 2021-07-15T01:40:56,116 f2py options: [] 2021-07-15T01:40:56,116 f2py:> build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nnmodule.c 2021-07-15T01:40:56,246 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:56,248 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:56,249 rmbadname1: Replacing "min" with "min_bn". 2021-07-15T01:40:56,249 rmbadname1: Replacing "max" with "max_bn". 2021-07-15T01:40:56,299 appenddecl: "dimension" not implemented. 2021-07-15T01:40:56,310 appenddecl: "dimension" not implemented. 2021-07-15T01:40:56,314 rmbadname1: Replacing "len" with "len_bn". 2021-07-15T01:40:56,315 appenddecl: "dimension" not implemented. 2021-07-15T01:40:56,670 Reading fortran codes... 2021-07-15T01:40:56,670 Reading file 'amlearn/featurize/src/distance_nn.f90' (format:free) 2021-07-15T01:40:56,671 {'before': '', 'this': 'use', 'after': ':: distance '} 2021-07-15T01:40:56,671 Line #29 in amlearn/featurize/src/distance_nn.f90:" use :: distance " 2021-07-15T01:40:56,671 analyzeline: Could not crack the use statement. 2021-07-15T01:40:56,671 {'before': '', 'this': 'use', 'after': ':: quicksort '} 2021-07-15T01:40:56,671 Line #31 in amlearn/featurize/src/distance_nn.f90:" use :: quicksort " 2021-07-15T01:40:56,671 analyzeline: Could not crack the use statement. 2021-07-15T01:40:56,671 Reading file 'amlearn/featurize/src/utils.f90' (format:free) 2021-07-15T01:40:56,672 Post-processing... 2021-07-15T01:40:56,672 Block: distance_nn 2021-07-15T01:40:56,672 Block: distance_neighbor 2021-07-15T01:40:56,672 Block: determinant_func 2021-07-15T01:40:56,672 Block: determinant 2021-07-15T01:40:56,672 Block: distance 2021-07-15T01:40:56,672 Block: distance_info 2021-07-15T01:40:56,673 Block: quicksort 2021-07-15T01:40:56,673 Block: quick_sort 2021-07-15T01:40:56,673 Block: cg_function 2021-07-15T01:40:56,673 Block: calculate_cg 2021-07-15T01:40:56,673 Block: angle 2021-07-15T01:40:56,673 Block: angle_info 2021-07-15T01:40:56,673 Block: c_stats 2021-07-15T01:40:56,674 Block: customize_stats 2021-07-15T01:40:56,674 Block: a_stats 2021-07-15T01:40:56,674 Block: all_stats 2021-07-15T01:40:56,674 Post-processing (stage 2)... 2021-07-15T01:40:56,674 Block: distance_nn 2021-07-15T01:40:56,674 Block: unknown_interface 2021-07-15T01:40:56,674 Block: distance_neighbor 2021-07-15T01:40:56,675 Block: determinant_func 2021-07-15T01:40:56,675 Block: determinant 2021-07-15T01:40:56,675 Block: distance 2021-07-15T01:40:56,675 Block: distance_info 2021-07-15T01:40:56,675 Block: quicksort 2021-07-15T01:40:56,675 Block: quick_sort 2021-07-15T01:40:56,675 Block: cg_function 2021-07-15T01:40:56,675 Block: calculate_cg 2021-07-15T01:40:56,676 Block: angle 2021-07-15T01:40:56,676 Block: angle_info 2021-07-15T01:40:56,676 Block: c_stats 2021-07-15T01:40:56,676 Block: customize_stats 2021-07-15T01:40:56,676 Block: a_stats 2021-07-15T01:40:56,676 Block: all_stats 2021-07-15T01:40:56,676 Building modules... 2021-07-15T01:40:56,677 Building module "distance_nn"... 2021-07-15T01:40:56,677 Constructing wrapper function "distance_neighbor"... 2021-07-15T01:40:56,677 n_neighbor_max,n_neighbor_list,neighbor_lists,neighbor_distance_lists = distance_neighbor(atom_type,atom_coords,distance_cutoff,allow_neighbor_limit,pbc,bds,n_neighbor_max,n_neighbor_list,neighbor_lists,neighbor_distance_lists,[n_atoms,n_neighbor_limit]) 2021-07-15T01:40:56,677 Constructing F90 module support for "determinant_func"... 2021-07-15T01:40:56,677 Constructing wrapper function "determinant_func.determinant"... 2021-07-15T01:40:56,677 deter_value = determinant(matrix) 2021-07-15T01:40:56,678 Constructing F90 module support for "distance"... 2021-07-15T01:40:56,678 Constructing wrapper function "distance.distance_info"... 2021-07-15T01:40:56,678 r,d = distance_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:56,678 Constructing F90 module support for "quicksort"... 2021-07-15T01:40:56,678 Creating wrapper for Fortran subroutine "quick_sort"("quick_sort")... 2021-07-15T01:40:56,678 Constructing wrapper function "quicksort.quick_sort"... 2021-07-15T01:40:56,678 quick_sort(array,sort_col,sort_index_min,sort_index_max) 2021-07-15T01:40:56,678 Constructing F90 module support for "cg_function"... 2021-07-15T01:40:56,679 Creating wrapper for Fortran function "calculate_cg"("calculate_cg")... 2021-07-15T01:40:56,679 Constructing wrapper function "cg_function.calculate_cg"... 2021-07-15T01:40:56,679 cg = calculate_cg(half_l_min,half_l_max) 2021-07-15T01:40:56,679 Constructing F90 module support for "angle"... 2021-07-15T01:40:56,679 Constructing wrapper function "angle.angle_info"... 2021-07-15T01:40:56,679 ksai,theta = angle_info(atom_coords_i,atom_coords_j,bds,pbc) 2021-07-15T01:40:56,679 Constructing F90 module support for "c_stats"... 2021-07-15T01:40:56,680 Creating wrapper for Fortran function "customize_stats"("customize_stats")... 2021-07-15T01:40:56,680 Constructing wrapper function "c_stats.customize_stats"... 2021-07-15T01:40:56,680 stats = customize_stats(list,stats_types,stats_types_sum,self_prop) 2021-07-15T01:40:56,680 Constructing F90 module support for "a_stats"... 2021-07-15T01:40:56,680 Creating wrapper for Fortran function "all_stats"("all_stats")... 2021-07-15T01:40:56,680 Constructing wrapper function "a_stats.all_stats"... 2021-07-15T01:40:56,680 stats = all_stats(list,[len_bn]) 2021-07-15T01:40:56,681 Wrote C/API module "distance_nn" to file "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nnmodule.c" 2021-07-15T01:40:56,681 Fortran 90 wrappers are saved to "build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nn-f2pywrappers2.f90" 2021-07-15T01:40:56,681 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:56,681 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:56,681 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:40:56,681 build_src: building npy-pkg config files 2021-07-15T01:40:56,682 creating /tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info 2021-07-15T01:40:56,682 writing /tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/PKG-INFO 2021-07-15T01:40:56,682 writing dependency_links to /tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/dependency_links.txt 2021-07-15T01:40:56,683 writing requirements to /tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/requires.txt 2021-07-15T01:40:56,684 writing top-level names to /tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/top_level.txt 2021-07-15T01:40:56,687 writing manifest file '/tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/SOURCES.txt' 2021-07-15T01:40:56,774 reading manifest file '/tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/SOURCES.txt' 2021-07-15T01:40:56,783 writing manifest file '/tmp/pip-pip-egg-info-qdm95fw2/amlearn.egg-info/SOURCES.txt' 2021-07-15T01:40:56,942 Source in /tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3 has version 0.2.2, which satisfies requirement amlearn==0.2.2 from https://files.pythonhosted.org/packages/55/df/26e461638a88a71b48f07abfe48d5bd2e5c20bb3cf3967a8d2e18385a460/amlearn-0.2.2.tar.gz#sha256=1ad6512e2146f4e145e097463f4575427820335c59fca3e6bfb41806c786799d 2021-07-15T01:40:56,943 Removed amlearn==0.2.2 from https://files.pythonhosted.org/packages/55/df/26e461638a88a71b48f07abfe48d5bd2e5c20bb3cf3967a8d2e18385a460/amlearn-0.2.2.tar.gz#sha256=1ad6512e2146f4e145e097463f4575427820335c59fca3e6bfb41806c786799d from build tracker '/tmp/pip-req-tracker-vn3qcukw' 2021-07-15T01:40:56,948 Created temporary directory: /tmp/pip-unpack-1syayglj 2021-07-15T01:40:56,949 Building wheels for collected packages: amlearn 2021-07-15T01:40:56,954 Created temporary directory: /tmp/pip-wheel-atf2s_l3 2021-07-15T01:40:56,955 Building wheel for amlearn (setup.py): started 2021-07-15T01:40:56,955 Destination directory: /tmp/pip-wheel-atf2s_l3 2021-07-15T01:40:56,955 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-atf2s_l3 2021-07-15T01:40:58,746 running bdist_wheel 2021-07-15T01:40:58,747 running build 2021-07-15T01:40:58,748 running config_cc 2021-07-15T01:40:58,748 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2021-07-15T01:40:58,749 running config_fc 2021-07-15T01:40:58,749 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2021-07-15T01:40:58,749 running build_src 2021-07-15T01:40:58,750 build_src 2021-07-15T01:40:58,750 building extension "amlearn.featurize.src.utils" sources 2021-07-15T01:40:58,750 f2py options: [] 2021-07-15T01:40:58,750 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,750 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,865 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/utils-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,866 building extension "amlearn.featurize.src.voronoi_nn" sources 2021-07-15T01:40:58,866 f2py options: [] 2021-07-15T01:40:58,866 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,866 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,866 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,867 building extension "amlearn.featurize.src.voronoi_stats" sources 2021-07-15T01:40:58,867 f2py options: [] 2021-07-15T01:40:58,867 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,867 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,867 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/voronoi_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,868 building extension "amlearn.featurize.src.boop" sources 2021-07-15T01:40:58,868 f2py options: [] 2021-07-15T01:40:58,868 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,869 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,869 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/boop-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,869 building extension "amlearn.featurize.src.mro_stats" sources 2021-07-15T01:40:58,869 f2py options: [] 2021-07-15T01:40:58,869 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,870 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,870 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/mro_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,870 building extension "amlearn.featurize.src.neighbor_data" sources 2021-07-15T01:40:58,870 f2py options: [] 2021-07-15T01:40:58,870 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,871 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,871 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/neighbor_data-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,871 building extension "amlearn.featurize.src.distance_stats" sources 2021-07-15T01:40:58,871 f2py options: [] 2021-07-15T01:40:58,871 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,872 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,872 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_stats-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,872 building extension "amlearn.featurize.src.distance_nn" sources 2021-07-15T01:40:58,872 f2py options: [] 2021-07-15T01:40:58,872 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c' to sources. 2021-07-15T01:40:58,872 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src' to include_dirs. 2021-07-15T01:40:58,873 adding 'build/src.linux-armv7l-3.9/amlearn/featurize/src/distance_nn-f2pywrappers2.f90' to sources. 2021-07-15T01:40:58,873 build_src: building npy-pkg config files 2021-07-15T01:40:58,874 running build_py 2021-07-15T01:40:58,879 creating build/lib.linux-armv7l-3.9 2021-07-15T01:40:58,879 creating build/lib.linux-armv7l-3.9/amlearn 2021-07-15T01:40:58,881 copying amlearn/_version.py -> build/lib.linux-armv7l-3.9/amlearn 2021-07-15T01:40:58,883 copying amlearn/__init__.py -> build/lib.linux-armv7l-3.9/amlearn 2021-07-15T01:40:58,886 creating build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,887 copying scripts/pdp_plot.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,890 copying scripts/feature_violinplot.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,892 copying scripts/distribution.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,895 copying scripts/generalization.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,897 copying scripts/featurize_bp_symmfunc.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,900 copying scripts/fractal_analysis.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,903 copying scripts/__init__.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,905 copying scripts/featurize_interstice.py -> build/lib.linux-armv7l-3.9/scripts 2021-07-15T01:40:58,908 creating build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:40:58,909 copying amlearn/learn/base.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:40:58,913 copying amlearn/learn/classifier.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:40:58,916 copying amlearn/learn/preprocessor.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:40:58,919 copying amlearn/learn/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:40:58,921 copying amlearn/learn/regressor.py -> build/lib.linux-armv7l-3.9/amlearn/learn 2021-07-15T01:40:58,926 creating build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,927 copying amlearn/utils/data.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,930 copying amlearn/utils/backend.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,933 copying amlearn/utils/verbose.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,935 copying amlearn/utils/basetest.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,937 copying amlearn/utils/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,942 copying amlearn/utils/directory.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,944 copying amlearn/utils/packing.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,947 copying amlearn/utils/check.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,950 copying amlearn/utils/logging.py -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:58,953 creating build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,955 copying amlearn/featurize/pipeline.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,958 copying amlearn/featurize/nearest_neighbor.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,961 copying amlearn/featurize/base.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,963 copying amlearn/featurize/short_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,968 copying amlearn/featurize/medium_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,971 copying amlearn/featurize/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,973 copying amlearn/featurize/symmetry_function.py -> build/lib.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:40:58,977 creating build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:40:58,978 copying amlearn/learn/sklearn_patch/_validation.py -> build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:40:58,983 copying amlearn/learn/sklearn_patch/_split.py -> build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:40:58,988 copying amlearn/learn/sklearn_patch/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/learn/sklearn_patch 2021-07-15T01:40:58,991 creating build/lib.linux-armv7l-3.9/amlearn/learn/tests 2021-07-15T01:40:58,992 copying amlearn/learn/tests/test_classifier.py -> build/lib.linux-armv7l-3.9/amlearn/learn/tests 2021-07-15T01:40:58,994 copying amlearn/learn/tests/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/learn/tests 2021-07-15T01:40:58,997 creating build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:40:58,999 copying amlearn/utils/tests/test_backend.py -> build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:40:59,001 copying amlearn/utils/tests/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:40:59,002 copying amlearn/utils/tests/test_data.py -> build/lib.linux-armv7l-3.9/amlearn/utils/tests 2021-07-15T01:40:59,006 creating build/lib.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:40:59,007 copying amlearn/featurize/src/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:40:59,010 creating build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:40:59,011 copying amlearn/featurize/tests/test_medium_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:40:59,014 copying amlearn/featurize/tests/test_short_range_order.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:40:59,017 copying amlearn/featurize/tests/__init__.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:40:59,019 copying amlearn/featurize/tests/test_featurizer_pipeline.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:40:59,021 copying amlearn/featurize/tests/test_nearest_neighbor.py -> build/lib.linux-armv7l-3.9/amlearn/featurize/tests 2021-07-15T01:40:59,024 copying amlearn/utils/default_environment.yaml -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:59,026 copying amlearn/utils/amlearn_logging.yaml -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:59,029 copying amlearn/utils/PTE.json -> build/lib.linux-armv7l-3.9/amlearn/utils 2021-07-15T01:40:59,041 running build_ext 2021-07-15T01:40:59,048 customize UnixCCompiler 2021-07-15T01:40:59,051 customize UnixCCompiler using build_ext 2021-07-15T01:40:59,189 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=native) 2021-07-15T01:40:59,189 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:40:59,190 creating /tmp/tmptsbk8vwq/home 2021-07-15T01:40:59,191 creating /tmp/tmptsbk8vwq/home/piwheels 2021-07-15T01:40:59,192 creating /tmp/tmptsbk8vwq/home/piwheels/.local 2021-07-15T01:40:59,193 creating /tmp/tmptsbk8vwq/home/piwheels/.local/lib 2021-07-15T01:40:59,194 creating /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9 2021-07-15T01:40:59,194 creating /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages 2021-07-15T01:40:59,196 creating /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy 2021-07-15T01:40:59,196 creating /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils 2021-07-15T01:40:59,197 creating /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks 2021-07-15T01:40:59,198 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:40:59,198 extra options: '-march=native' 2021-07-15T01:40:59,309 CCompilerOpt.cc_test_flags[1008] : testing flags (-O3) 2021-07-15T01:40:59,310 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:40:59,310 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:40:59,311 extra options: '-O3' 2021-07-15T01:40:59,416 CCompilerOpt.cc_test_flags[1008] : testing flags (-Werror) 2021-07-15T01:40:59,417 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:40:59,417 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:40:59,417 extra options: '-Werror' 2021-07-15T01:40:59,522 CCompilerOpt.__init__[1696] : check requested baseline 2021-07-15T01:40:59,530 CCompilerOpt.__init__[1705] : check requested dispatch-able features 2021-07-15T01:40:59,539 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon) 2021-07-15T01:40:59,539 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:40:59,540 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:40:59,540 extra options: '-mfpu=neon' 2021-07-15T01:40:59,643 CCompilerOpt.feature_test[1461] : testing feature 'NEON' with flags (-mfpu=neon) 2021-07-15T01:40:59,644 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:40:59,644 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:40:59,645 extra options: '-mfpu=neon -Werror' 2021-07-15T01:41:00,124 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2021-07-15T01:41:00,124 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:00,125 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:00,125 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee' 2021-07-15T01:41:00,237 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-vfpv4) 2021-07-15T01:41:00,238 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:00,238 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:00,239 extra options: '-mfpu=neon-vfpv4' 2021-07-15T01:41:00,345 CCompilerOpt.feature_test[1461] : testing feature 'NEON_VFPV4' with flags (-mfp16-format=ieee -mfpu=neon-vfpv4) 2021-07-15T01:41:00,346 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:00,346 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:00,347 extra options: '-mfp16-format=ieee -mfpu=neon-vfpv4 -Werror' 2021-07-15T01:41:00,790 CCompilerOpt.feature_test[1461] : testing feature 'NEON_FP16' with flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2021-07-15T01:41:00,790 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:00,791 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:00,791 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee -Werror' 2021-07-15T01:41:01,248 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp-armv8 -march=armv8-a+simd) 2021-07-15T01:41:01,248 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:01,248 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:01,249 extra options: '-mfpu=neon-fp-armv8 -march=armv8-a+simd' 2021-07-15T01:41:01,365 CCompilerOpt.feature_test[1461] : testing feature 'ASIMD' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd) 2021-07-15T01:41:01,366 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:01,366 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:01,366 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd -Werror' 2021-07-15T01:41:01,861 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16) 2021-07-15T01:41:01,862 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:01,862 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:01,862 extra options: '-march=armv8.2-a+fp16' 2021-07-15T01:41:01,974 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDHP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16) 2021-07-15T01:41:01,975 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:01,976 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:01,976 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16 -Werror' 2021-07-15T01:41:02,627 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+dotprod) 2021-07-15T01:41:02,627 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:02,628 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:02,628 extra options: '-march=armv8.2-a+dotprod' 2021-07-15T01:41:02,739 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDDP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod) 2021-07-15T01:41:02,740 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:02,740 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:02,740 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror' 2021-07-15T01:41:03,233 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimddp.c -o /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimddp.o -MMD -MF /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimddp.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror) failed with exit status 1 output -> 2021-07-15T01:41:03,234 /tmp/cc80JxEq.s: Assembler messages: 2021-07-15T01:41:03,234 /tmp/cc80JxEq.s:79: Error: selected processor does not support `vudot.u8 q8,q9,q10' in ARM mode 2021-07-15T01:41:03,242 CCompilerOpt.feature_test[1477] : testing failed 2021-07-15T01:41:03,252 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16fml) 2021-07-15T01:41:03,252 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:03,252 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:03,253 extra options: '-march=armv8.2-a+fp16fml' 2021-07-15T01:41:03,360 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDFHM' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml) 2021-07-15T01:41:03,361 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:03,361 compile options: '-I/usr/include/python3.9 -c' 2021-07-15T01:41:03,361 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror' 2021-07-15T01:41:03,828 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c -o /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.o -MMD -MF /tmp/tmptsbk8vwq/home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror) failed with exit status 1 output -> 2021-07-15T01:41:03,828 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c: In function ‘main’: 2021-07-15T01:41:03,828 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: implicit declaration of function ‘vfmlal_low_u32’; did you mean ‘vfmlal_low_f16’? [-Werror=implicit-function-declaration] 2021-07-15T01:41:03,829 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2021-07-15T01:41:03,829 | ^~~~~~~~~~~~~~ 2021-07-15T01:41:03,829 | vfmlal_low_f16 2021-07-15T01:41:03,829 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: incompatible type for argument 1 of ‘vget_lane_f32’ 2021-07-15T01:41:03,829 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2021-07-15T01:41:03,829 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T01:41:03,830 | | 2021-07-15T01:41:03,830 | int 2021-07-15T01:41:03,830 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:4: 2021-07-15T01:41:03,830 /usr/lib/gcc/arm-linux-gnueabihf/10/include/arm_neon.h:6171:28: note: expected ‘float32x2_t’ but argument is of type ‘int’ 2021-07-15T01:41:03,830 6171 | vget_lane_f32 (float32x2_t __a, const int __b) 2021-07-15T01:41:03,830 | ~~~~~~~~~~~~^~~ 2021-07-15T01:41:03,831 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: implicit declaration of function ‘vfmlslq_high_u32’; did you mean ‘vfmlslq_high_f16’? [-Werror=implicit-function-declaration] 2021-07-15T01:41:03,831 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2021-07-15T01:41:03,831 | ^~~~~~~~~~~~~~~~ 2021-07-15T01:41:03,831 | vfmlslq_high_f16 2021-07-15T01:41:03,831 /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: incompatible type for argument 1 of ‘vgetq_lane_f32’ 2021-07-15T01:41:03,831 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2021-07-15T01:41:03,832 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T01:41:03,832 | | 2021-07-15T01:41:03,832 | int 2021-07-15T01:41:03,832 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/distutils/checks/cpu_asimdfhm.c:4: 2021-07-15T01:41:03,832 /usr/lib/gcc/arm-linux-gnueabihf/10/include/arm_neon.h:6269:29: note: expected ‘float32x4_t’ but argument is of type ‘int’ 2021-07-15T01:41:03,832 6269 | vgetq_lane_f32 (float32x4_t __a, const int __b) 2021-07-15T01:41:03,833 | ~~~~~~~~~~~~^~~ 2021-07-15T01:41:03,833 cc1: all warnings being treated as errors 2021-07-15T01:41:03,838 CCompilerOpt.feature_test[1477] : testing failed 2021-07-15T01:41:03,845 CCompilerOpt.__init__[1721] : initialize targets groups 2021-07-15T01:41:03,852 CCompilerOpt.__init__[1723] : parse target group simd_test 2021-07-15T01:41:03,860 CCompilerOpt._parse_target_tokens[1934] : skip targets (XOP FMA4 SSE2 (AVX2 FMA3) SSE42 AVX512F AVX512_SKX VSX VSX3 VSX2) not part of baseline or dispatch-able features 2021-07-15T01:41:03,867 CCompilerOpt.generate_dispatch_header[2267] : generate CPU dispatch header: (build/src.linux-armv7l-3.9/numpy/distutils/include/npy_cpu_dispatch_config.h) 2021-07-15T01:41:03,874 CCompilerOpt.generate_dispatch_header[2276] : dispatch header dir build/src.linux-armv7l-3.9/numpy/distutils/include does not exist, creating it 2021-07-15T01:41:03,943 get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2021-07-15T01:41:03,943 customize Gnu95FCompiler 2021-07-15T01:41:03,946 Found executable /usr/bin/gfortran 2021-07-15T01:41:04,009 customize Gnu95FCompiler 2021-07-15T01:41:04,076 customize Gnu95FCompiler using build_ext 2021-07-15T01:41:04,077 building 'amlearn.featurize.src.utils' extension 2021-07-15T01:41:04,081 compiling C sources 2021-07-15T01:41:04,081 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-15T01:41:04,083 creating build/temp.linux-armv7l-3.9/build 2021-07-15T01:41:04,083 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-15T01:41:04,084 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:41:04,085 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:41:04,086 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:41:04,088 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build 2021-07-15T01:41:04,089 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-15T01:41:04,090 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn 2021-07-15T01:41:04,091 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:41:04,092 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:41:04,094 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-15T01:41:04,159 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.carm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c 2021-07-15T01:41:04,709 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T01:41:04,710 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T01:41:04,710 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T01:41:04,710 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.h:13, 2021-07-15T01:41:04,711 from build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c:16: 2021-07-15T01:41:04,711 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T01:41:04,711 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T01:41:04,711 | ^~~~~~~ 2021-07-15T01:41:04,737 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T01:41:04,738 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T01:41:04,738 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T01:41:04,738 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.h:13, 2021-07-15T01:41:04,739 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src/fortranobject.c:2: 2021-07-15T01:41:04,739 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T01:41:04,739 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T01:41:04,739 | ^~~~~~~ 2021-07-15T01:41:04,801 build/src.linux-armv7l-3.9/amlearn/featurize/src/utilsmodule.c:109:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2021-07-15T01:41:04,801 109 | static int f2py_size(PyArrayObject* var, ...) 2021-07-15T01:41:04,802 | ^~~~~~~~~ 2021-07-15T01:41:06,366 compiling Fortran 90 module sources 2021-07-15T01:41:06,367 creating build/temp.linux-armv7l-3.9/amlearn 2021-07-15T01:41:06,368 creating build/temp.linux-armv7l-3.9/amlearn/featurize 2021-07-15T01:41:06,369 creating build/temp.linux-armv7l-3.9/amlearn/featurize/src 2021-07-15T01:41:06,372 Fortran f77 compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops 2021-07-15T01:41:06,372 Fortran f90 compiler: /usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2021-07-15T01:41:06,372 Fortran fix compiler: /usr/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops 2021-07-15T01:41:06,372 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-15T01:41:06,373 extra options: '-Jbuild/temp.linux-armv7l-3.9/amlearn/featurize/src -Ibuild/temp.linux-armv7l-3.9/amlearn/featurize/src' 2021-07-15T01:41:06,375 gfortran:f90: amlearn/featurize/src/utils.f90 2021-07-15T01:41:06,470 amlearn/featurize/src/utils.f90:259:16: 2021-07-15T01:41:06,471 259 | REAL(16) :: std 2021-07-15T01:41:06,471 | 1 2021-07-15T01:41:06,471 Error: Kind 16 not supported for type REAL at (1) 2021-07-15T01:41:06,472 amlearn/featurize/src/utils.f90:285:18: 2021-07-15T01:41:06,473 285 | std = std + (list(atom) - mean)**2 2021-07-15T01:41:06,473 | 1 2021-07-15T01:41:06,474 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 2021-07-15T01:41:06,480 error: Command "/usr/bin/gfortran -Wall -g -fno-second-underscore -fPIC -O3 -funroll-loops -Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/amlearn/featurize/src -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c -c amlearn/featurize/src/utils.f90 -o build/temp.linux-armv7l-3.9/amlearn/featurize/src/utils.o -Jbuild/temp.linux-armv7l-3.9/amlearn/featurize/src -Ibuild/temp.linux-armv7l-3.9/amlearn/featurize/src" failed with exit status 1 2021-07-15T01:41:06,481 ########### EXT COMPILER OPTIMIZATION ########### 2021-07-15T01:41:06,482 Platform : 2021-07-15T01:41:06,483 Architecture: armhf 2021-07-15T01:41:06,483 Compiler : gcc 2021-07-15T01:41:06,483 CPU baseline : 2021-07-15T01:41:06,483 Requested : 'min' 2021-07-15T01:41:06,484 Enabled : none 2021-07-15T01:41:06,484 Flags : none 2021-07-15T01:41:06,484 Extra checks: none 2021-07-15T01:41:06,484 CPU dispatch : 2021-07-15T01:41:06,485 Requested : 'max -xop -fma4' 2021-07-15T01:41:06,485 Enabled : NEON NEON_FP16 NEON_VFPV4 ASIMD ASIMDHP 2021-07-15T01:41:06,485 Generated : none 2021-07-15T01:41:06,486 CCompilerOpt.cache_flush[804] : write cache to path -> /tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3/build/temp.linux-armv7l-3.9/ccompiler_opt_cache_ext.py 2021-07-15T01:41:06,674 Building wheel for amlearn (setup.py): finished with status 'error' 2021-07-15T01:41:06,675 ERROR: Failed building wheel for amlearn 2021-07-15T01:41:06,676 Running setup.py clean for amlearn 2021-07-15T01:41:06,677 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-tv3r9nak/amlearn_39acca153b284e978e1d20a3a89b00e3/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-15T01:41:08,373 running clean 2021-07-15T01:41:08,374 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-15T01:41:08,394 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-15T01:41:08,430 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-15T01:41:08,431 'build/scripts.linux-armv7l-3.9' does not exist -- can't clean it 2021-07-15T01:41:08,576 Failed to build amlearn 2021-07-15T01:41:08,577 ERROR: Failed to build one or more wheels 2021-07-15T01:41:08,578 Exception information: 2021-07-15T01:41:08,578 Traceback (most recent call last): 2021-07-15T01:41:08,578 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-15T01:41:08,578 status = self.run(options, args) 2021-07-15T01:41:08,578 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-15T01:41:08,578 return func(self, options, args) 2021-07-15T01:41:08,578 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-15T01:41:08,578 raise CommandError( 2021-07-15T01:41:08,578 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-15T01:41:08,582 Removed build tracker: '/tmp/pip-req-tracker-vn3qcukw'