2021-07-15T03:26:35,127 Created temporary directory: /tmp/pip-ephem-wheel-cache-87i0j4__ 2021-07-15T03:26:35,130 Created temporary directory: /tmp/pip-req-tracker-vlhmi7gp 2021-07-15T03:26:35,130 Initialized build tracking at /tmp/pip-req-tracker-vlhmi7gp 2021-07-15T03:26:35,130 Created build tracker: /tmp/pip-req-tracker-vlhmi7gp 2021-07-15T03:26:35,130 Entered build tracker: /tmp/pip-req-tracker-vlhmi7gp 2021-07-15T03:26:35,131 Created temporary directory: /tmp/pip-wheel-px32_qn7 2021-07-15T03:26:35,158 1 location(s) to search for versions of bx-python: 2021-07-15T03:26:35,158 * https://pypi.org/simple/bx-python/ 2021-07-15T03:26:35,158 Fetching project page and analyzing links: https://pypi.org/simple/bx-python/ 2021-07-15T03:26:35,159 Getting page https://pypi.org/simple/bx-python/ 2021-07-15T03:26:35,160 Found index url https://pypi.org/simple 2021-07-15T03:26:35,389 Found link https://files.pythonhosted.org/packages/ad/17/2f1c2fd7777a6fe0b3ffd8c45172a1462a9c2b0bac9c587739a7f8ef06d4/bx-python-0.6.0.tar.gz#sha256=bf2dbfcca0df7762d69a97ceabb696bbbd21650a17d6ef1447b396e6d9d99910 (from https://pypi.org/simple/bx-python/), version: 0.6.0 2021-07-15T03:26:35,390 Found link https://files.pythonhosted.org/packages/7b/8d/45cb4a291802a40fab711c55bd51904161a3074a03c9600c2dac7c16ed88/bx-python-0.7.1.tar.gz#sha256=9ff7b5354de03c463da6d245d3256a41966e718a16f4021b7f8d4861305c9ea1 (from https://pypi.org/simple/bx-python/), version: 0.7.1 2021-07-15T03:26:35,390 Found link https://files.pythonhosted.org/packages/9d/17/57c5925e099d7a61cbfdb41fc9acbfca404b83730a1af534e2bcddd23289/bx-python-0.7.2.tar.gz#sha256=b083b2c87807bbfa5b11196754768147ca5bb15001cb0dd76ef217065b4ca451 (from https://pypi.org/simple/bx-python/), version: 0.7.2 2021-07-15T03:26:35,391 Found link https://files.pythonhosted.org/packages/55/db/fa76af59a03c88ad80494fc0df2948740bbd58cd3b3ed5c31319624687cc/bx-python-0.7.3.tar.gz#sha256=518895e2dca313d7634c5cf48190b4020a463d6aa6adb42a261630bbd7e0e297 (from https://pypi.org/simple/bx-python/), version: 0.7.3 2021-07-15T03:26:35,391 Found link https://files.pythonhosted.org/packages/74/3e/f19be7f3fb6c6f7d4932050e3dfb1634354c6e896e27d2301ba4df9145e0/bx-python-0.8.1.tar.gz#sha256=057b560c669527a784197a2f8005689d331f62f4765ae4d14bc2217e82dcd8af (from https://pypi.org/simple/bx-python/), version: 0.8.1 2021-07-15T03:26:35,391 Found link https://files.pythonhosted.org/packages/7b/b9/fb458d37d89fa71ce39475d9a44d7830950c3cd6533879a2115a42ac122b/bx-python-0.8.2.tar.gz#sha256=faeb0c7c9fcb2f95c4fc1995af4f45287641deee43a01659bd30fe95c5d37386 (from https://pypi.org/simple/bx-python/), version: 0.8.2 2021-07-15T03:26:35,411 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8c/8a/51cc793ef328dbf61aaae3b21b72d493ee235a93bb1a2171198b7a6da401/bx_python-0.8.2-cp27-cp27m-macosx_10_6_intel.whl#sha256=3522c03f2604f5f070ef1129c66ae0b5763ac30399e357b0c96c8f29dc054e4e (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,412 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/57/29/e45e37b501d037256b6bef11089c824603a9328bc2f3c3177c3b81bf54e0/bx_python-0.8.2-cp27-cp27m-manylinux1_i686.whl#sha256=03a5599f3dc593f86ef6e36fef1af1c5cdb79b6a0819d8bca5258f29de9316d0 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,412 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f8/d8/d588dbf6ea9a46a91bf60fcbdf54690ead1014b538725a3db9594acdf73f/bx_python-0.8.2-cp27-cp27m-manylinux1_x86_64.whl#sha256=c9132bc8fe10fda342eb97924504f2d1072b917892842b19c3557ce656d68ccc (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,413 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c9/0d/86159e1b51cb9b8c0d243351ea8f4a04c3b6a29a99e0996d74747e71f26a/bx_python-0.8.2-cp27-cp27mu-manylinux1_i686.whl#sha256=8d712bff8e6df0937bcf9a7efbaecabab09952a254e7941f7a1f95453f65fc6a (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,413 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/de/c2/4bd23312465b448017a8f66e1eba1bee0f8ff1dcd3168c0e134222309edc/bx_python-0.8.2-cp35-cp35m-manylinux1_x86_64.whl#sha256=218dd6b7d83c84fe3ae4ba906101e59fdcd553540253124d743f79a0ccd00b74 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,416 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e1/d5/75bb409db607116f7e2b6ceb199a43e35ec052b08ec27e0eeb0a94403972/bx_python-0.8.2-cp36-cp36m-macosx_10_6_intel.whl#sha256=e10e66d96c399ca21326af919b405055f3f1c66880ab569f55b0d54fcd424a71 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,417 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/96/b8/b607e495154b0397f37da09dde4caa617cae48e3191b0842edd505c51ba4/bx_python-0.8.2-cp36-cp36m-manylinux1_i686.whl#sha256=f3e568f5858a11a2f9fc573036b983d189857ae90c6da40fc1ca3c15c5556a8f (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,417 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/59/a0/6a8d14ae2ee8eb9c903969b65d598c9f0d4f0dcd7c849dda3ad7b9bb0bcb/bx_python-0.8.2-cp36-cp36m-manylinux1_x86_64.whl#sha256=1600342b4b9cff53e1a4554f75486d110726f647d9a46db25ed64d1b7f3b054c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,418 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5e/cc/46e368445c8b288c4049ea3c8065321e19d21052f8f57061dfef54fec15e/bx_python-0.8.2-cp37-cp37m-macosx_10_6_intel.whl#sha256=b96e8afa295d45e3db53468d7d01c1adea1671accc3c64b51b2e1598eaf50c03 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,418 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2a/13/1a5d6ca25e16aff4b95cbbc6f84614ed83f93eae9a4b8d5c074dd350f666/bx_python-0.8.2-cp37-cp37m-manylinux1_i686.whl#sha256=d391ca89a8b939890dc6f72d87e3ca22a62fa183269a4651967bf9f9b48ec0dd (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,419 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/da/fe/ef6f4eac24793a24d25da79a3bcfa429739a54597e493a2a7a78efa953dd/bx_python-0.8.2-cp37-cp37m-manylinux1_x86_64.whl#sha256=0b773d36f62faf4848b1088af2e94c226494474eab27e69da5d564ca61222dfb (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,419 Found link https://files.pythonhosted.org/packages/ff/49/8f37bbd3e618c6ef7fd70d255b712dfce41b69059069d46e0660691cacb5/bx-python-0.8.3.tar.gz#sha256=5ba295d3c2cf4d106d069dc53d8d09e4a129b8cc8cb41ee7d72f562b3930c339 (from https://pypi.org/simple/bx-python/), version: 0.8.3 2021-07-15T03:26:35,419 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4f/13/9b864ccd3b7b206f174b8942f38bced8c39ae1070b40329e8e75789c0ae7/bx_python-0.8.3-cp27-cp27m-macosx_10_6_intel.whl#sha256=67c35882c542b6b7966f930c8d252298a5ecd1b731eb861aced74af4fabf934a (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,420 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6b/0f/e5a25c17e4730f2afe770a43898eaaadc6f9264ec73b589dc2d981614098/bx_python-0.8.3-cp27-cp27m-macosx_10_9_x86_64.whl#sha256=1d00f65639b924ad14f616babf68f96d1b4d238079732c7e7ddcb4977933e4d7 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,420 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5e/93/0c0bd7b0bcba395b30ded9d249667a48eb5ca34746c97c5051f4dbf92002/bx_python-0.8.3-cp27-cp27m-manylinux1_i686.whl#sha256=bb6f9bdd97246e9997a19a933dd7dc42cabc6f219a99e171322890f5aafd7fdb (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,421 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9e/42/0c71892e96ca96214faa48c2189f6d0b9fb22811c16c71733344f10de943/bx_python-0.8.3-cp27-cp27m-manylinux1_x86_64.whl#sha256=8b2113c277e104846e4340034ca7caf3289e41e1adb6f2a51cca2f1f96fd58c2 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,421 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/45/7f/129997471d4b8aceec55a3d383fedc8e0b13f5c1b2cb99572d31a00d4997/bx_python-0.8.3-cp27-cp27mu-manylinux1_i686.whl#sha256=7a3b632113f16e5fb16bdaa92502ba4081bcbca16c67fb35d66bcba5d9ba520c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,422 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/82/b8/2cf1d86c44040487f7d65a9c663c4a7ffa6444eb590395fcb5714696625e/bx_python-0.8.3-cp27-cp27mu-manylinux1_x86_64.whl#sha256=a80fe51a637de53a1b8465eec9495eaf28d725ceb4f6e68eb1ba5231d3a368b6 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,422 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/cf/a0/f476fc33b50248e7c38e4f6ad3a6cc573df9611f4676e470c2bb0b09571e/bx_python-0.8.3-cp34-cp34m-macosx_10_6_intel.whl#sha256=9795c6d17ba7d0fb140980fd625c0d0b61d74d9dc09493a5741658553ba1d0eb (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,422 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/6e/2e/12578ff7e08fbeb679fe3e210b865ce990851449bc7884a6fb91e990db23/bx_python-0.8.3-cp35-cp35m-macosx_10_6_intel.whl#sha256=20c17a70b25cc298bcb5f4a0dca66bcd9fb0b7873fb3278786260d1af2745e54 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,424 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4f/00/e5354ec07020c85138233794823f094f0ddd4fdbabfc49e17b1d2fe8e4dc/bx_python-0.8.3-cp35-cp35m-macosx_10_9_x86_64.whl#sha256=68ea36307387e563f9a154982e9b26a88b9b7bca73e5aeb280cf7456ddab6409 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,424 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/20/d8/4f3b480d634bc375aedc95bb937df62b93549753da4a2c56520e1cc95d45/bx_python-0.8.3-cp36-cp36m-manylinux1_i686.whl#sha256=a5065d491c9b09892d987fcfa6161424bdc483997d2a594eef7c7d56e4098504 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,426 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/42/9e/77e265b366d82e05f0e6ded64edc9a9ac85c2f90b8a7282c3499c8b87f8d/bx_python-0.8.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=36671c09ffddf5d563adbcfc04957f5b2ae5283cf6701b3f432ea4224a7a2cbe (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,427 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5d/6f/6b2432445d12d657bfbf470f7174a7c8713ceb67617aea4387815004a375/bx_python-0.8.3-cp37-cp37m-macosx_10_6_intel.whl#sha256=ec18074209cf68530db9e9459b45e9b0ff295565804d38809eb0b8a9661ed3d7 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,427 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/87/33/d4ea2daae22fba3f58dad92627faefd4652f2ac54a714645fc2c43ce7572/bx_python-0.8.3-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=531bfacdb0b57f7ffa6aa2cad18068ff75e91cd10e1534749655b9aae67f7290 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,428 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/38/fe/875f36c5dd357b28f2b6ddf08831c12a0322092ec43d07891059a7fc6b83/bx_python-0.8.3-cp37-cp37m-manylinux1_i686.whl#sha256=0f264de97f1075d9e69ff019bd714cc2bdbbdf269e786eb9f337ca2f366a8a3c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,428 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8c/9d/54252e8406a16c3caad7afef21508050578c467160a574ae01d672648029/bx_python-0.8.3-cp37-cp37m-manylinux1_x86_64.whl#sha256=4edac451aec0603daed406d2abd6043f920e78afa9e4b6402021bad149b81da5 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,428 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4d/c5/9c8bc28c0e58c1f88bd66bb0f42cd20b82f289935f766501d57818972e0c/bx_python-0.8.3-cp38-cp38-macosx_10_9_x86_64.whl#sha256=0f8b9ab987a6914b5bae5146211aa5e1536b8ab9cf73f6fa6ff8ca79b127347c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,429 Skipping link: none of the wheel's tags (cp39-cp39-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9f/55/84d2bfff30b994740e61acbdf4f37a9b8d616c5ab115bd0f655f42b94af5/bx_python-0.8.3-cp39-cp39-macosx_10_9_x86_64.whl#sha256=a12d573834814fb4d407a10a1453846e77ba16b22594129f967172c6cc6ea6c3 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,429 Skipping link: none of the wheel's tags (pp27-pypy_73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0e/43/d5aef355dcea90ee753003158f7701bf65a625a66f0c79725274652e4cc4/bx_python-0.8.3-pp27-pypy_73-macosx_10_9_x86_64.whl#sha256=ea46f1703e8b16faecda111eb9d99a6ca7e4542f06bb8c17a9a5a38714fe640f (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,429 Found link https://files.pythonhosted.org/packages/7f/0a/2e6f962221f12ac2aabb51dc31dd08ed5f769cad5abef831619d7ef42e80/bx-python-0.8.4.tar.gz#sha256=9698390a777a41d3b7f5e833ec1bacb8193fea847889a2092c848afd6b8a7b85 (from https://pypi.org/simple/bx-python/), version: 0.8.4 2021-07-15T03:26:35,430 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/02/74/ba10104095bb2c208b6bdf7164674aba07069c22f75da1be22a71364a18f/bx_python-0.8.4-cp27-cp27m-macosx_10_6_intel.whl#sha256=0a1fad247a647efd79e5ad771f60a5e2e61bbdc502440da37c367840874b7b9d (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,430 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/fb/a4/a9df49abc7d3d7a5f0efbe3a59f255b6f3d08b56178f39c1ae71e0334431/bx_python-0.8.4-cp27-cp27m-manylinux1_i686.whl#sha256=6a393293cfa5494706e68f39cc731921f6f18fcbcadaba9b1acaf885e175ff44 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,431 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a3/f7/1019ff3c57d68d9839adacdaa4fc380b477b994fab38b5bff0e282cc56d0/bx_python-0.8.4-cp27-cp27m-manylinux1_x86_64.whl#sha256=913960f27bfd61a906aaeef58103f7d926e408d2a876ab2a6b4c8810c8963197 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,431 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f8/a9/6d62f61f8bd65c5e95b11add9a125a59db66c9f37c7eddfbda950e8788fc/bx_python-0.8.4-cp27-cp27mu-manylinux1_i686.whl#sha256=ce24d1d10376e2861892e05a65a193737407d0508096195d7a8b99a5680111e7 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,432 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/55/fd/fad7621833686f26f7d5cbeae03584599d13c289ba980af41355e7ef27ae/bx_python-0.8.4-cp27-cp27mu-manylinux1_x86_64.whl#sha256=b5dab08d51ced45fb49589ea23f88be3b77af6f130a8434e6ef593862575e114 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,432 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/02/a7/78b4dd40a91ce9f0edad78ec7a59cdc80e54251e12d220a617db92e4b8ee/bx_python-0.8.4-cp34-cp34m-manylinux1_x86_64.whl#sha256=051f3ac05966d9d126f6fcda4e2974af95f765e47f39bc949f3caae2e53a8c63 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,433 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a0/83/9349d58458a4be5e83c46441de52e262bc73927f59ecaeff8b1132b33299/bx_python-0.8.4-cp35-cp35m-macosx_10_6_intel.whl#sha256=5915a8b725dd628c4a19a1b137dc871300731d24c7e54afc1306867401bde44c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,434 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/04/bb/53c90ff62c9eef8440e9fffb45306eba7cd6ccedd4d4ea2f09c6d748b1b6/bx_python-0.8.4-cp35-cp35m-manylinux1_i686.whl#sha256=9d3acd92a7add8ab80710fc18cbc81b81d0a9c8a8328944540139ba3551d9d14 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,434 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/73/74/c67d3fee1c6430679bb91304cde970fe440f13726fbc238367bd39cc6a0d/bx_python-0.8.4-cp35-cp35m-manylinux1_x86_64.whl#sha256=10e1546250dc3912df9fddbac1ea63790dc806dd92bf8e960ae8c926533371a5 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,435 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/42/85/30944623168a67f4e29b65bf2fef058b438d36ede86daa744d305aaa01a3/bx_python-0.8.4-cp36-cp36m-manylinux1_x86_64.whl#sha256=b904e804d11b0d28fc2447ccc66433b0a10f8fb193c8f89794d077e4c3075d3a (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,436 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/bf/78/5e69362f2b449a21b508980b94949b18f87b8eb3735c081128e0c7ffd545/bx_python-0.8.4-cp37-cp37m-macosx_10_6_intel.whl#sha256=1d45d63c419aab89b302ab15bbffc9119ec379d5d01f7ae17708c4ddbc3ba6bf (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,436 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/24/4c/834ddffde232a14e2fd230ad3193cedacdbd4495667aea9313346ee048d9/bx_python-0.8.4-cp37-cp37m-manylinux1_i686.whl#sha256=d0fba78794b3f24ee402c89c1a2fda0fbb4d3ce5a617195c713b28fd286a2e5f (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,437 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/57/66/2f55a309ddb7406155d4653a3f75ae6a041f04b833964e907ee950c1b227/bx_python-0.8.4-cp37-cp37m-manylinux1_x86_64.whl#sha256=6a83b0e97d79150c03eb634a6d5171fcfa6f504b274ab34f4ec51715a3cac1a1 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,437 Found link https://files.pythonhosted.org/packages/83/14/90c855fdd0f696f9d42433cd3f11cc35ac25faf4459fbff5f5defcd3a05c/bx-python-0.8.5.tar.gz#sha256=a01921da9c862c7a568dd7e4896de5a96eb4faaa990edc3baaf68186a158d981 (from https://pypi.org/simple/bx-python/), version: 0.8.5 2021-07-15T03:26:35,437 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/34/92/14237a6dccb848128a1f9e83fe0153d019c714d9c5a72a637a530efb4a9f/bx_python-0.8.5-cp27-cp27m-macosx_10_6_intel.whl#sha256=890f3fcd6e4569e48e50fcc4383351ab740121242134ca35bde9184c4bf04d29 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,438 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/69/fb/b10eeba2bf259e8baa0dc23fa8f93b4d159bd5dc4b8862fd4181988235a1/bx_python-0.8.5-cp27-cp27m-manylinux1_i686.whl#sha256=b575de5943852daeecc325dc3e2b0036fb4059cc00af9fb149b3fc5c249aa0fa (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,438 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/90/cb/bb3cebd69dd5d0905dc2d7e621e0eb72e0b3d6a07f6b520c81876e11ef6d/bx_python-0.8.5-cp27-cp27m-manylinux1_x86_64.whl#sha256=e4e7efc66fc1fb6551cce22dee2ec00d501bcf7d73e49f28a266cfa4542d28d9 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,439 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/5a/aa134b89abbac90f5215c98758ebeefeb307a839921bd8982af161ddc9d5/bx_python-0.8.5-cp27-cp27mu-manylinux1_i686.whl#sha256=5197ed272e1f1d1db1d824f18d10196d5d4c3596cf4ce3e4932c8057a6e4d307 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,439 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/14/b8/1c40ee1582302784ffe32c8b2ff32d3562ff43b37b8b32a471ef74ab781d/bx_python-0.8.5-cp27-cp27mu-manylinux1_x86_64.whl#sha256=77a317d87c561bf7eab8b2460e799d633da85047d5d6190ff62fb01fb2324143 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,440 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d0/bf/27fba4dbd8c871c298102a6284177dca829e2b44bf90dafbc667316de8d2/bx_python-0.8.5-cp34-cp34m-macosx_10_6_intel.whl#sha256=571e7b7e563a95269f10b28cee4b3e2e9b48f51323492c61ecad812ab3e4c796 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,440 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/04/93/c068b540aee17ff56f67889a98cf01e2937c73746ad871fe83f4c5da76a5/bx_python-0.8.5-cp34-cp34m-manylinux1_i686.whl#sha256=2f0ed1c1753bb3a9dd2b4e18afb28098285c5826978dcc60664b36dde3a9af9e (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,440 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c8/a1/fbc49d46986ecbd18fee8b3ccb81a4ac81392a0982cfabb19ebd644618b2/bx_python-0.8.5-cp34-cp34m-manylinux1_x86_64.whl#sha256=f5ceee121b235a339e0dd0ec4b916fc5652a614cf6e0b9b6ea90709420b5b7f1 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,441 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f8/01/c8b093789bcc75dee484064d067e8dcb988fe2d206683e12ec5af989772d/bx_python-0.8.5-cp35-cp35m-macosx_10_6_intel.whl#sha256=e8d43ae52ccbae5677c1bd18e5f7fde696089e8a409e90255998cc51093a28df (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,441 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/fb/bd/2894e64a7509bdafd6e52d466441445b39e2577092789efaffc6ac5a56ed/bx_python-0.8.5-cp35-cp35m-manylinux1_i686.whl#sha256=c16866889d099d8fb2bfadf8baf92590120681c5cd93b0274c36b4173a7acd7e (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,442 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5c/d4/9cf401b385a7560f18371d2b097033fe8aed6c7b57ad2c4a1a1aa30f5fb1/bx_python-0.8.5-cp35-cp35m-manylinux1_x86_64.whl#sha256=f1c603ee706894432c0d950ce3755279cd0ee57c6c2e675b4245e56e36819ab1 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,442 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/48/5f/ef4164ad24e409b2d96f0cb50701ddf7cee10659298aa9fd7c176c66f527/bx_python-0.8.5-cp36-cp36m-macosx_10_6_intel.whl#sha256=3ba89a70ec90a49434a2591da150378282bd20633baf5652201e37e4a7d14f84 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,443 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6b/09/770b928aae101d4cabb0594421995dbf2f3fac0712933cb281530fa159f4/bx_python-0.8.5-cp36-cp36m-manylinux1_i686.whl#sha256=c241be5fc818aea7897c70e865f590c9397a9c6a15debd9476024a59f06c1ed7 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,443 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8d/98/d041efb521a6a85e9305f07678c880f7c51e54509b19492ea20659021f60/bx_python-0.8.5-cp36-cp36m-manylinux1_x86_64.whl#sha256=5cf382c6c03d23856a1380a99d4a6405b844b24898e86004037d12c212868e98 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,443 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/de/61/faf4cc59b794b8f7fc38e5f934064b8a19c4e253f7631f02a0a0c4c015a9/bx_python-0.8.5-cp37-cp37m-macosx_10_6_intel.whl#sha256=f5dfaf074bd3e0da90f856b8a55fbaeb3b50757c89c6771ce0e3883cd84fe8f6 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,444 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8d/e6/29b183b50fbdc77cf0482fbd25df8978d28b3ded35f926d6b12487fd3910/bx_python-0.8.5-cp37-cp37m-manylinux1_i686.whl#sha256=e4aa38a28efc6c9838acb57e70a6488a8d8c3f76477f18e74b611814f38c7c1b (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,444 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): 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2021-07-15T03:26:35,445 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8a/ad/b6ca5674007c0434fe2be300d65faf99a77e9d022a93c09b778f3d3e2294/bx_python-0.8.6-cp27-cp27m-manylinux1_i686.whl#sha256=86778e9eb4f195160cd4439fb46fcb22bae4219d714982f08c17c13d71d9602c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,446 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a8/4e/498dca333572492dccce17d94b7e9eea04df51d25c85c5c616178f53e2a2/bx_python-0.8.6-cp27-cp27m-manylinux1_x86_64.whl#sha256=4dae36031d30154a5aae40020f7c0cfc27dc142e412ff224304dbf6633a408a9 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,446 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/70/9e/1db1e6263a146d5a2e87467b6ca4cd4ff4a06f72206d6ff81f7f25afb2c1/bx_python-0.8.6-cp27-cp27m-manylinux2010_i686.whl#sha256=078cdcefe7e1fbb90bf037c32486df1b20d7518c3cbb880ea5d7efa530475b1f (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,447 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6f/43/86b935d3626eec97978b12de73242fdc6c251f3c073bd6c19321d2a6dc95/bx_python-0.8.6-cp27-cp27m-manylinux2010_x86_64.whl#sha256=e5dd177782d186ce33a343e6c7ca9def3dcc5e1228c14b1810cb0b1eade2f86b (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,447 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a5/ec/2cb819195027d79b95e6bd292d62d8cdf9469da68bdfcd71ffa77fb3c86a/bx_python-0.8.6-cp27-cp27mu-manylinux1_i686.whl#sha256=7bbfdfa38f493157dba22001e5d96bdcdc553138584af30fa63fd8e5739fe7d7 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,448 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/43/7d/ec1b6eac2b3579062cb87a33b5e514a35737d85a18422e69f3d54373d2a1/bx_python-0.8.6-cp27-cp27mu-manylinux1_x86_64.whl#sha256=747a7372e13fbb115a98593654617134a2c3cd02ede62113539a2b7296821fec (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,448 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b2/5c/59eba4e4b79426c77f81823dc7c0d77bf7765e51204051f43d009a870889/bx_python-0.8.6-cp27-cp27mu-manylinux2010_i686.whl#sha256=83816b45f2ede9158d9c18a5f2bdf0c9fe6c5c868e63fc259ddedaf048fd94be (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,448 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f2/73/66ecaee12aad7c4955a0451b7f621b4fb3ed9fe0868caa80b60d16e4b806/bx_python-0.8.6-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=980c65a6119cd71026696e833df9d4d1fca0c83a75125fd1bbacecd833713178 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,449 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/32/1f/ac5914fcfa04bb557482761fa4454c2d953439896fa704396cab87e62ea1/bx_python-0.8.6-cp35-cp35m-macosx_10_6_intel.whl#sha256=ebfd8751fd8a4ceb24a69b6fc1a8c29ff1b3a681fa4e4a1fd39a7e322b96fbfb (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,449 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/43/6b/a8841c21c6e09a0bf042b1327c5d24953d62edddaef127f527925ec19649/bx_python-0.8.6-cp35-cp35m-manylinux1_i686.whl#sha256=cf97e9b3def0814af58164b1f3ffba21a6910af8ee45e9154b11bf20da003916 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,450 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2c/11/4a0cadfd36e2e5f01d23020c248aeadece52fbd87a8154411af51999a950/bx_python-0.8.6-cp35-cp35m-manylinux1_x86_64.whl#sha256=83d03b9cc3c3bedf3e1d50bac3e16e5d9aba87033992bbeec9e04e74c6fc26e5 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,450 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e7/7d/1b53cdb0add6b5af8d2833d6d767ec32837bd2d7ca3cbc14eee71922c4ab/bx_python-0.8.6-cp35-cp35m-manylinux2010_i686.whl#sha256=615f9eec991211312252a7a73d7e1a3338ad7dba30f57cff046da254548ebccb (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,451 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a5/d1/2e20ce2b89077eec5543d55601bdc94f89ad36fd73bcd12417692aba1214/bx_python-0.8.6-cp35-cp35m-manylinux2010_x86_64.whl#sha256=cee5454447e6e3545f94e650564e519c5688375b47b4b8dbd60b7f937bc0d21d (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,451 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a6/b9/a35beffd3322c8cb2abc536acc93428b8080e161f43205aa5b3d6cbb1bc0/bx_python-0.8.6-cp36-cp36m-macosx_10_6_intel.whl#sha256=070d3e716e600a9dc6be26392f1e4d5e8764b8eb573fabdb2b1ff5f493c993a3 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,451 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/1f/a4/d2e237c3289f3cf8b45d50bbf05df8e9d721a6560288a93f42ab82a23659/bx_python-0.8.6-cp36-cp36m-manylinux2010_i686.whl#sha256=1eea223f1facc086df248c0ae339133832461504d95e1a8faaa134274489694f (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,453 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a5/59/9452703967ce309b7a0e5ef1a96ab6fb1b460396af4167974ced28a30a53/bx_python-0.8.6-cp36-cp36m-manylinux2010_x86_64.whl#sha256=f5417fd1606af200cceea114260cd47668d49842459496e94725c9c7fb6359b9 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,453 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f7/12/1bb56f5b2364e9ff213d3c8bb2d1a603353e2426f4817896e87111adf742/bx_python-0.8.6-cp37-cp37m-macosx_10_6_intel.whl#sha256=097932e2be98df0dd8f3efe3dae0129c3e8e73f817d7bbda09f72e95ffc071d3 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,453 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4a/73/99fbb7ec8a3a96907027690ed700e762592944395eb9864d0299267f5f32/bx_python-0.8.6-cp37-cp37m-manylinux1_i686.whl#sha256=c80e1c41b5dbfe77388689dd46e7f57ce8e88a86c8341a6438bfed1cdccbba93 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,454 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b4/d5/09b47275929b83679949d8ab61065536c0beec809e009192fee0abce2050/bx_python-0.8.6-cp37-cp37m-manylinux1_x86_64.whl#sha256=09c3e2baede99fc296a44030626e51b01383fae5367ce54c06640cac88951606 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,454 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2f/f8/2c3da7e7b502ea17561dfae2040eaef3713ec3971c3d6561da1cb706988c/bx_python-0.8.6-cp37-cp37m-manylinux2010_i686.whl#sha256=9c9cd0f17f0f0293f7e5309a194b56169eed052f3d1124702139e44eab1e5d2c (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,455 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8d/19/aa61efde1460be908ce0bab9eefdf582c06b194c20c43bd8fb6ac29f1764/bx_python-0.8.6-cp37-cp37m-manylinux2010_x86_64.whl#sha256=9a41589715d261c0dcd5801ea4451f9ed1b19423452b30b9d911af183b392d0e (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,455 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/26/e4/e0c4a4bbf934b6c7e71ab12f2f55e3aa22835aa2e0390fc51179a68ed6ce/bx_python-0.8.6-cp38-cp38-macosx_10_9_x86_64.whl#sha256=140a24e7db4b2aa8ff51d125f1b4408b82f651d558676206cb7188440c0a7e6b (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,456 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ad/99/381476123fc39f6fa0384d3eab3477f0a3d22cce6aa4432e29a68209c299/bx_python-0.8.6-cp38-cp38-manylinux1_i686.whl#sha256=63a8ce14fe4102a25ef39216022698170bd64e0e7dd2817b0fcaaf2f1b795940 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,456 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0a/80/31f4cbe6de38e56f8bcaa4e24a47e6470b74f35f6a3b6e7b9d1a3cb6827a/bx_python-0.8.6-cp38-cp38-manylinux1_x86_64.whl#sha256=0b3b6b4576dc708d0c81f817a33b8e8853125e0d6f16e995292c73b25c64c168 (from https://pypi.org/simple/bx-python/) 2021-07-15T03:26:35,456 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): 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Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0c/17/7ee812ec078a9034789f626133be5a29be87a40bb980bcb14217e675141c/bx_python-0.8.9-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=f1e2e195dc435af0b51ba71c5870112968e67b71f7daff068fda86db1809f480 (from https://pypi.org/simple/bx-python/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*) 2021-07-15T03:26:35,502 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ea/79/d721f55cec220ba73c87bccb16cf3d232c3c152da83c921f7748dc7e6963/bx_python-0.8.9-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=4c78c7f5847b0826b044db52651c3ac168f30b0163b990e2c15da6e7067e57f7 (from https://pypi.org/simple/bx-python/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*) 2021-07-15T03:26:35,502 Found link https://files.pythonhosted.org/packages/e9/0d/cdde9b57ae1f62da0302b73e3e7983723f081b8098f745a9115af3bc89ab/bx-python-0.8.10.tar.gz#sha256=f1e17b85ee5830b6e634d3f7e7f95adab8b713b9d10511feca4d8bd921c27304 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6), version: 0.8.10 2021-07-15T03:26:35,503 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5a/15/7adb95c9da8fdf2f947240b7cf1746c63b8699decf9c9f0b02b50a7e9322/bx_python-0.8.10-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=5511008cad21f921e0025eaa665d9ddd41926d95144ceff9b30b0f45c4d15525 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,503 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/11/64/11d88881ff08a5bcd0721eb9a34c8f157433a1fffd3a4fef2e16a0a37c1d/bx_python-0.8.10-cp36-cp36m-manylinux1_i686.whl#sha256=f5a51fac77ffe78f9aa41d85fbf6e75a697cd7950797f92d79301776a7706375 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,504 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5b/98/52825b4bc72e3274891cfe105a559118b65e272aac3b24a9dfaf7aa395bf/bx_python-0.8.10-cp36-cp36m-manylinux1_x86_64.whl#sha256=d80aafda0f90be99572c84ba99a1da59062296f6234e5342a56a42f70aa75a5b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,504 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/63/1b/4cee3239bb0ec441b16e22707da1ed4bf692085830751a88abbeb16c15ff/bx_python-0.8.10-cp36-cp36m-manylinux2010_i686.whl#sha256=72d864eaefed000e35c1a7859524b2c2828047c5bb32c5bd1596ddc5b775e307 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,505 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/36/e3/353511735f350ba528dcc2aa7ef90f76a3779dcd4876ca61c41e4f9cc026/bx_python-0.8.10-cp36-cp36m-manylinux2010_x86_64.whl#sha256=3ca443537eabd6f1901b7f253e893742a0bcf50e9f2f3986a8080ad01beab1a8 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,505 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a8/05/946515212957a09309192e2c100ea09b36d1b7c0a20b230aa96c89dfa00f/bx_python-0.8.10-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=76c6fdb02b3154ef7445cb9535185543c47ce136b5da71a29cfb28a82814ecd4 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,505 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/96/64/ec84f907f77a539b47b8bf53b8b1fcea99115a7766337e1fcf571101ccfe/bx_python-0.8.10-cp37-cp37m-manylinux1_i686.whl#sha256=e60ef8a7ea3f2448d4ce9aee9ae0b806948c8158001794af0b1195bebd477d93 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,506 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a7/9f/35bf1540470c9b80b96b86a6e4ac1a75c566f19bc3f4e08b2e4e141b4af6/bx_python-0.8.10-cp37-cp37m-manylinux1_x86_64.whl#sha256=fe7c1bab4e264acdef278e04895943a2b9185629c82069699cb5f7c2ee3aa77c (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,506 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a7/44/8b00881dfa6c2b49f5102f43166fdeb873a544ff94aaf0f62cba1c0d1bde/bx_python-0.8.10-cp37-cp37m-manylinux2010_i686.whl#sha256=6a35dd006e73815501ed645ad11efee57ff95209d9ffe0bfe5177d498887f516 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,507 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/05/62/d29d52bde474dd07f370c2a2d88cb411a7869c6c98bc3c6c26a5e753f4f3/bx_python-0.8.10-cp37-cp37m-manylinux2010_x86_64.whl#sha256=c3b7bbcd008e14d0ddfd0c312485402c901db81af0b598f64d60ead6633334dd (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,507 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e4/26/3d2d33313678e3b76d53988d30753fc2ab34c824a46d5bfd56eb2f8fb67e/bx_python-0.8.10-cp38-cp38-macosx_10_9_x86_64.whl#sha256=34e8dcd22521a744ad218749dc46688da2ae410d176b1eb8222e853343bda7cf (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,508 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/3f/a5/f4fd1c7bdf95fa4c175a9829d591b33f4b89a978aaefd43a9496badd6b8d/bx_python-0.8.10-cp38-cp38-manylinux1_i686.whl#sha256=5ead629c48f072400f2d92b4b7c0263d3e04544993436190b8816c49a006d8da (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,508 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e8/20/9d09d53fb8f10d0e1a8beafb389a6138a0bba3dc5c38caa703360fbee2e8/bx_python-0.8.10-cp38-cp38-manylinux1_x86_64.whl#sha256=1a157f14e16e5bd887aba38a77477c45a7148a4a91e890317759c4164930836b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,508 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/96/a8/97843069ec65305d6b2bc8e9f1c41c16dfa1087297ac66d4f57f41ef53ca/bx_python-0.8.10-cp38-cp38-manylinux2010_i686.whl#sha256=dc4f0b8c4194f497726223ee4371841675aefc88a972c3aa581014c35969b96b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,509 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/45/fd/4e61f1b043de87f691ba95aa2908bfa8a4a2e2fe103c83c240280461df05/bx_python-0.8.10-cp38-cp38-manylinux2010_x86_64.whl#sha256=c12f8b920ad5dd8314d0f899e38cd6db2345d223979474cb11aa23e8d9012631 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,509 Skipping link: none of the wheel's tags (cp39-cp39-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/3a/71/f552a7bc9757e70976b6fb89ffd4f65414e64c8877788c3ed22e8f14973d/bx_python-0.8.10-cp39-cp39-macosx_10_9_x86_64.whl#sha256=b4257626878e92736057971755a9818839111abb715214aa940b819168a5476e (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,510 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/72/ee/e9cf75b0fbe389125ecabc45e3eacabf0180e8670c622d9db05d63cb5154/bx_python-0.8.10-cp39-cp39-manylinux1_i686.whl#sha256=dd9bbcbe35ae37abbb4ce95db90ae0649a2659be4ca1193d028bbc518a525c58 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,510 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4d/4c/8f943d44576ed83ae7442f5e2d491dedcb435af40e69ac4593ba5c705a27/bx_python-0.8.10-cp39-cp39-manylinux1_x86_64.whl#sha256=57140f120ef02f06410543f04b8d7c1051bcac08c7a10088ba5797fe154888e5 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,510 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/43/dc/1de7b82d1b96b246cff9fcfba17ea2d6136bf66d987bdf5bde59e62bd05e/bx_python-0.8.10-cp39-cp39-manylinux2010_i686.whl#sha256=6792bc5a71f1caa67114c26c5eafe10abb1896a55ad7d326b108e791c9804130 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,511 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c7/78/fb2fb4e52e688cae1fd9bf1a441eb0a5beb062666cfff673611335b08dd3/bx_python-0.8.10-cp39-cp39-manylinux2010_x86_64.whl#sha256=6a267531c544f4dfbc31b94b384966004be5718aab4dd0141072b337696767dd (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,511 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8b/e5/51ff86a839d79e47b514c9fa4b067b4ac63fc4a8ab4bd6a965de5a29bbdd/bx_python-0.8.10-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=76e960201699d3f8a0746f82e30296ca3cef713f6f928112d3a6134078f87d6e (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,512 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/52/4b/78a3fbdc30d7754c426c308f7dc16542bd886a631747edc9f5015e789d4a/bx_python-0.8.10-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=bea61fc3d1e70423feb1f0e5ad5fe0a2cc9709258ba5e97eddb30b4a875ce751 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,512 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1e/03/91f741328629e5b65489a69b88a57720fff97644519c29684c3e3ef963e6/bx_python-0.8.10-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=491b80194abb27ce4a5896e478fe53744139bd8692b96c7e248a7f8fe196c76c (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,513 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/65/81/8962aaf607080f670136562af5171a4e29b963a0321d7c1662d5c2088500/bx_python-0.8.10-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=c05018a0d34dfc3185185cead9b12b275341e527fd7626830cc4cc358d01926d (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,513 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5d/63/e131946f1bed548aeeb75d2ad4cb48526ebd4aaeb40f61f50b4242afdb07/bx_python-0.8.10-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=68bd2dfc301eec76b357a6d354b06c4f0247c61c8d112a80f9c5828371f5dcf2 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,513 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/7d/2e/a9994987c16f0c5993ca071f590bbbd9a1ae00d5bc1c51b70643acfe8559/bx_python-0.8.10-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=c6dee68077e27200df7596ebcb1f376a8ed7724b7d53595118a9bb12c45c4d8f (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,514 Found link https://files.pythonhosted.org/packages/09/06/34d30efc7ee4f94945335a1aa4c5fc461e406f3c9f9f73f6102d26bf1932/bx-python-0.8.11.tar.gz#sha256=7f26c2a5516b999f4330887f2b126608b4d96ed0f1de6e62ee59f3d066586974 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6), version: 0.8.11 2021-07-15T03:26:35,514 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8b/aa/56315a902f6a126e45a2f249ce7ba44acea3a329031200c29473799cacec/bx_python-0.8.11-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=c8a61e3944c888e1099e98caadae84cfb8944c04675235a8417c4cd5b1ca7c16 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,515 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/10/77/969b74a8a2c4610cde8fccb3628a79e979d7b1fd671ae9bb6b79c9da5b98/bx_python-0.8.11-cp36-cp36m-manylinux1_i686.whl#sha256=219381dfecad8d87cbc09c135e3183f312ef0b66778b53a41d2e208819034791 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,515 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0b/ac/fe999126a74ef16b1bbaae444b3502c582544162b26a6c0b139787331a3f/bx_python-0.8.11-cp36-cp36m-manylinux1_x86_64.whl#sha256=ffd619286de4ebe75642f7a4a9156f3bab7a48ef7992bada6f662767a11c1bc8 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,516 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d5/1e/580a7c1a0c03ecd1d91d35d4d5e69c52454c3f115c742a611c1b4e4edf10/bx_python-0.8.11-cp36-cp36m-manylinux2010_i686.whl#sha256=19603a14783af56280e0de7f092b8de775b2ce786a87724a40d8a5bc60fd78bb (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,516 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/32/0e/3e65963a1aafee0e36d5fdec16b5d6a965d7ec31afdbf59668f12d85fd3a/bx_python-0.8.11-cp36-cp36m-manylinux2010_x86_64.whl#sha256=25deb190b107ecdb91b23f1c68cbdde0ccb27df632eab06c0824792f888767bb (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,517 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/62/7a/552f13359097301b07358cee4a2b7cace6e844542967aa9390ebe41e079d/bx_python-0.8.11-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=7df75fe1488530103732eb7d2b4ab99e91d2006b4a52f955cb8908069da4d06b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,517 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a1/60/5b6c19daf08b4a39f6a229351f4497231181603f4a799173020ffcf61e48/bx_python-0.8.11-cp37-cp37m-manylinux1_i686.whl#sha256=2375cd26a82f538bf4ad96e8f70e276ca18de0f234d857817e6005bbdf7f6b16 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,518 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e2/c8/d619fb52e487fe3823ba50e7d3ebba7ecb3eb5d2339d85702b364429bce3/bx_python-0.8.11-cp37-cp37m-manylinux1_x86_64.whl#sha256=f1ea0429bc882cb5fbb987888ed416b46fe365a0c6bc15056704f16f19083e4b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,518 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5c/56/e5e1238d7a88a4eb56c41552b9b3ebd1cca24cba87b8c70810ceed8b6cd5/bx_python-0.8.11-cp37-cp37m-manylinux2010_i686.whl#sha256=03b66e7d40e430363be53129501307ed747079357c11d3eacfd9629f642c0a72 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,519 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c9/18/04f562cbc03594d7713b35aec0578cf2cfcb99623350778c9df4d1d122cc/bx_python-0.8.11-cp37-cp37m-manylinux2010_x86_64.whl#sha256=7192b17f977eed99ef2aef07408d623a81722e079437f55a44ce48d03b3d93ee (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,519 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5b/d9/a10de8e92ebd96d791f5977b9514de81ed155d4db0a4fb54e8900f3c6b75/bx_python-0.8.11-cp38-cp38-macosx_10_9_x86_64.whl#sha256=859ea10fd4e78ebb2dedb3ff1927241a50fd2087ffb8475bc3e68462bd2537e1 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,519 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/41/96/f9c70e5074a536a17c39b85a3b50d3bea2aaeb5f0f6ecb19286182e4c24d/bx_python-0.8.11-cp38-cp38-manylinux1_i686.whl#sha256=6f9695f36e50a05e83223ce24b496dab124b08f71c85969886ce1d630f2d5302 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,520 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/00/77/82c2a7a81ad5e92829c71b6a7dd115db4f443c58c205a9ece9d49f93b481/bx_python-0.8.11-cp38-cp38-manylinux1_x86_64.whl#sha256=6754abcaa9368d456f45da1271a1aae990c0e6ae6907b22ce9f2a6131bc4ba9b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,520 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/74/fa/54b3ad4cbd9295e6381e5b7e2893102370fd11705b607c2706802697a787/bx_python-0.8.11-cp38-cp38-manylinux2010_i686.whl#sha256=f192b848f99b62c61578093b4cce4eef6f97d0390c55103e51e38c053d37c3af (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,521 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/af/15/8ccc0b60252c717e1047596d71d17f21a7a3076a938963d2aa3550a2aed2/bx_python-0.8.11-cp38-cp38-manylinux2010_x86_64.whl#sha256=a380b44ae954ff5c5c5b504b95a75a35e4d38e9bd8080fa5dd3c9b41f38dc5dd (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,521 Skipping link: none of the wheel's tags (cp39-cp39-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6b/75/73976b2491a4b0a4b78b6fca974bb42b1a3fa445f348a6dfa83dfda170f8/bx_python-0.8.11-cp39-cp39-macosx_10_9_x86_64.whl#sha256=631313cfc6b1c57f561155352009ee102af2c3baf4708c0e5828ee86f535d242 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,522 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/aa/c9/0ca6679e46386ccf434efd4e0c612174d3e3f8500dc6625244bc8d8af923/bx_python-0.8.11-cp39-cp39-manylinux1_i686.whl#sha256=fd2f3529e0310fbb45a7682b2fed67c604bcd1e83a4de67db5b8ae913929a3b9 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,522 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b1/0f/ebc077a5f9af238d7a31b99fce1a470e8fce90a50f1bfc8230cbca2f0311/bx_python-0.8.11-cp39-cp39-manylinux1_x86_64.whl#sha256=c9bb843ae52a292587767ec188b6f8e2cdc006333a43968c9bab5c49e80a52cf (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,522 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/dd/54/39ae5f5b0fa0e707c0b58fdc17d859762674b2259dd09e2546f0e97e6c0b/bx_python-0.8.11-cp39-cp39-manylinux2010_i686.whl#sha256=68c52125cfb2b7872f4370f69dd3f206d557483533aa20ea747c8509ae08bb5a (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,523 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/b4/427cf1d6e6090ee580f51d12d0b0133570b682703fa39514bff301268727/bx_python-0.8.11-cp39-cp39-manylinux2010_x86_64.whl#sha256=b291113f656becea27c2ea3c1f1f3061c2bf822b376f46dc89f588b77410cc30 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,523 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/30/0a/fc92d003024fe3b2d3a3cd550d7479832ca7701ded9c3c4a9667c89be4ba/bx_python-0.8.11-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=4ca0619a9d1853e755441bb6c6a57ba40ab8a5cca301ef23796c50bdac2e49b7 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,524 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ba/60/cffbc0eb0e67b135fbfa8bae65cecf5b0014a1bf3e19d67e03ecc769daa7/bx_python-0.8.11-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=4d3fb29373a53b97e66ec91ce8c1b3260472cfcb1a9be1ef96ca59404feee12e (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,524 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/85/55/79dd532576cb1b9e7ad45ac75b21c582cd9f0c1e191b27900fcaf9be4add/bx_python-0.8.11-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=4c3af8ddfb7481f3ef8c69aaa5851043edf27f042ec95a8b6d88c2f0dbf3a36d (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,524 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/23/40/88476393f6c5b371204677ecb62177bfa8bb9f719d23fa025c809400c563/bx_python-0.8.11-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=3a2adbad10c540b24e21b2ca5c71abbb99dd1617d38b2e53455b23d0f638176b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,525 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8c/62/d7df582698ce4c6bbe4ef3c27f65fd6622cf31b5f5b9d82d74dd9edf7d8f/bx_python-0.8.11-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=53516c1b68c7222a95182f55597f977c4803fb57a37277bbbf00c90773c3f3b4 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,525 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8a/6e/3c16ac592a4fa3dacb0ae83f6b4a2485c28b3f0ba07a3a1d6df0677e1b1a/bx_python-0.8.11-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=b785703d01cbd58b8398dbd4e1faabe48957b8ae0a1760f7870f761a86c520e6 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T03:26:35,526 Skipping link: not a file: https://pypi.org/simple/bx-python/ 2021-07-15T03:26:35,528 Given no hashes to check 1 links for project 'bx-python': discarding no candidates 2021-07-15T03:26:35,548 Collecting bx-python==0.8.5 2021-07-15T03:26:35,549 Created temporary directory: /tmp/pip-unpack-81utruzz 2021-07-15T03:26:36,326 Downloading bx-python-0.8.5.tar.gz (1.4 MB) 2021-07-15T03:26:37,347 Added bx-python==0.8.5 from https://files.pythonhosted.org/packages/83/14/90c855fdd0f696f9d42433cd3f11cc35ac25faf4459fbff5f5defcd3a05c/bx-python-0.8.5.tar.gz#sha256=a01921da9c862c7a568dd7e4896de5a96eb4faaa990edc3baaf68186a158d981 to build tracker '/tmp/pip-req-tracker-vlhmi7gp' 2021-07-15T03:26:37,348 Running setup.py (path:/tmp/pip-wheel-px32_qn7/bx-python_4d7c891f245947d29950d8037c17e0db/setup.py) egg_info for package bx-python 2021-07-15T03:26:37,349 Created temporary directory: /tmp/pip-pip-egg-info-yjb0m343 2021-07-15T03:26:37,349 Running command python setup.py egg_info 2021-07-15T03:26:38,830 running egg_info 2021-07-15T03:26:38,833 creating /tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info 2021-07-15T03:26:38,834 writing /tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/PKG-INFO 2021-07-15T03:26:38,836 writing dependency_links to /tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/dependency_links.txt 2021-07-15T03:26:38,838 writing requirements to /tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/requires.txt 2021-07-15T03:26:38,839 writing top-level names to /tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/top_level.txt 2021-07-15T03:26:38,841 writing manifest file '/tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/SOURCES.txt' 2021-07-15T03:26:38,879 reading manifest file '/tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/SOURCES.txt' 2021-07-15T03:26:38,881 reading manifest template 'MANIFEST.in' 2021-07-15T03:26:38,882 warning: no files found matching 'distribute_setup.py' 2021-07-15T03:26:39,113 adding license file 'LICENSE' 2021-07-15T03:26:39,119 writing manifest file '/tmp/pip-pip-egg-info-yjb0m343/bx_python.egg-info/SOURCES.txt' 2021-07-15T03:26:39,224 Source in /tmp/pip-wheel-px32_qn7/bx-python_4d7c891f245947d29950d8037c17e0db has version 0.8.5, which satisfies requirement bx-python==0.8.5 from https://files.pythonhosted.org/packages/83/14/90c855fdd0f696f9d42433cd3f11cc35ac25faf4459fbff5f5defcd3a05c/bx-python-0.8.5.tar.gz#sha256=a01921da9c862c7a568dd7e4896de5a96eb4faaa990edc3baaf68186a158d981 2021-07-15T03:26:39,225 Removed bx-python==0.8.5 from https://files.pythonhosted.org/packages/83/14/90c855fdd0f696f9d42433cd3f11cc35ac25faf4459fbff5f5defcd3a05c/bx-python-0.8.5.tar.gz#sha256=a01921da9c862c7a568dd7e4896de5a96eb4faaa990edc3baaf68186a158d981 from build tracker '/tmp/pip-req-tracker-vlhmi7gp' 2021-07-15T03:26:39,229 Created temporary directory: /tmp/pip-unpack-2uh7ypd6 2021-07-15T03:26:39,230 Building wheels for collected packages: bx-python 2021-07-15T03:26:39,233 Created temporary directory: /tmp/pip-wheel-2uoka1u0 2021-07-15T03:26:39,234 Building wheel for bx-python (setup.py): started 2021-07-15T03:26:39,234 Destination directory: /tmp/pip-wheel-2uoka1u0 2021-07-15T03:26:39,234 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-px32_qn7/bx-python_4d7c891f245947d29950d8037c17e0db/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-px32_qn7/bx-python_4d7c891f245947d29950d8037c17e0db/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-2uoka1u0 2021-07-15T03:26:40,728 running bdist_wheel 2021-07-15T03:26:40,733 running build 2021-07-15T03:26:40,733 running build_py 2021-07-15T03:26:40,741 creating build 2021-07-15T03:26:40,741 creating build/lib.linux-armv7l-3.9 2021-07-15T03:26:40,742 copying lib/psyco_full.py -> build/lib.linux-armv7l-3.9 2021-07-15T03:26:40,745 creating build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,746 copying lib/bx/seqmapping_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,748 copying lib/bx/seqmapping.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,750 copying lib/bx/filter.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,752 copying lib/bx/binned_array_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,753 copying lib/bx/wiggle_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,755 copying lib/bx/gene_reader.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,758 copying lib/bx/interval_index_file.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,760 copying lib/bx/bitset_utils.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,762 copying lib/bx/bitset_builders.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,764 copying lib/bx/binned_array.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,766 copying lib/bx/__init__.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,768 copying lib/bx/wiggle.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,770 copying lib/bx/bitset_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,772 copying lib/bx/interval_index_file_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T03:26:40,774 creating build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,775 copying lib/bx_extras/lrucache.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,777 copying lib/bx_extras/fpconst.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,779 copying lib/bx_extras/stats.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,785 copying lib/bx_extras/pyparsing.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,791 copying lib/bx_extras/__init__.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,793 copying lib/bx_extras/pstat.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,796 copying lib/bx_extras/fpconst_tests.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T03:26:40,798 creating build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T03:26:40,799 copying lib/bx/phylo/newick.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T03:26:40,801 copying lib/bx/phylo/newick_tests.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T03:26:40,802 copying lib/bx/phylo/phast_tests.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T03:26:40,804 copying lib/bx/phylo/__init__.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T03:26:40,806 copying lib/bx/phylo/phast.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T03:26:40,808 creating build/lib.linux-armv7l-3.9/bx/bbi 2021-07-15T03:26:40,808 copying lib/bx/bbi/bigwig_tests.py -> build/lib.linux-armv7l-3.9/bx/bbi 2021-07-15T03:26:40,810 copying lib/bx/bbi/__init__.py -> build/lib.linux-armv7l-3.9/bx/bbi 2021-07-15T03:26:40,813 creating build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,813 copying lib/bx/seq/fasta.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,815 copying lib/bx/seq/nib.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,817 copying lib/bx/seq/core.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,819 copying lib/bx/seq/twobit_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,821 copying lib/bx/seq/__init__.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,822 copying lib/bx/seq/fasta_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,824 copying lib/bx/seq/nib_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,825 copying lib/bx/seq/twobit.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,827 copying lib/bx/seq/qdna.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,829 copying lib/bx/seq/seq.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,831 copying lib/bx/seq/qdna_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,833 copying lib/bx/seq/seq_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T03:26:40,835 creating build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T03:26:40,836 copying lib/bx/intervals/intersection_tests.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T03:26:40,838 copying lib/bx/intervals/cluster_tests.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T03:26:40,840 copying lib/bx/intervals/random_intervals.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T03:26:40,842 copying lib/bx/intervals/__init__.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T03:26:40,844 copying lib/bx/intervals/io.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T03:26:40,846 creating build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T03:26:40,847 copying lib/bx/motif/pwm_tests.py -> build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T03:26:40,849 copying lib/bx/motif/pwm.py -> build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T03:26:40,851 copying lib/bx/motif/__init__.py -> build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T03:26:40,853 creating build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,854 copying lib/bx/align/core.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,856 copying lib/bx/align/epo.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,859 copying lib/bx/align/score_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,861 copying lib/bx/align/epo_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,863 copying lib/bx/align/score.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,865 copying lib/bx/align/lav_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,867 copying lib/bx/align/maf.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,869 copying lib/bx/align/maf_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,871 copying lib/bx/align/__init__.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,872 copying lib/bx/align/lav.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,875 copying lib/bx/align/axt.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T03:26:40,878 creating build/lib.linux-armv7l-3.9/bx/tabular 2021-07-15T03:26:40,878 copying lib/bx/tabular/__init__.py -> build/lib.linux-armv7l-3.9/bx/tabular 2021-07-15T03:26:40,880 copying lib/bx/tabular/io.py -> build/lib.linux-armv7l-3.9/bx/tabular 2021-07-15T03:26:40,882 creating build/lib.linux-armv7l-3.9/bx/intseq 2021-07-15T03:26:40,883 copying lib/bx/intseq/__init__.py -> build/lib.linux-armv7l-3.9/bx/intseq 2021-07-15T03:26:40,886 creating build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,886 copying lib/bx/misc/bgzf_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,888 copying lib/bx/misc/seekbzip2_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,890 copying lib/bx/misc/seeklzop_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,891 copying lib/bx/misc/readlengths.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,893 copying lib/bx/misc/cdb.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,895 copying lib/bx/misc/seeklzop.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,897 copying lib/bx/misc/__init__.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,899 copying lib/bx/misc/cdb_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,900 copying lib/bx/misc/filecache.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,902 copying lib/bx/misc/binary_file.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,904 copying lib/bx/misc/filecache_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,906 copying lib/bx/misc/seekbzip2.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T03:26:40,908 creating build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T03:26:40,909 copying lib/bx/cookbook/doc_optparse.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T03:26:40,911 copying lib/bx/cookbook/argparse.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T03:26:40,915 copying lib/bx/cookbook/__init__.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T03:26:40,917 copying lib/bx/cookbook/progress_bar.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T03:26:40,919 copying lib/bx/cookbook/attribute.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T03:26:40,921 creating build/lib.linux-armv7l-3.9/bx/arrays 2021-07-15T03:26:40,922 copying lib/bx/arrays/array_tree_tests.py -> build/lib.linux-armv7l-3.9/bx/arrays 2021-07-15T03:26:40,924 copying lib/bx/arrays/__init__.py -> build/lib.linux-armv7l-3.9/bx/arrays 2021-07-15T03:26:40,926 creating build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,927 copying lib/bx/pwm/pwm_score_maf.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,929 copying lib/bx/pwm/bed_score_aligned_pwm.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,931 copying lib/bx/pwm/position_weight_matrix.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,934 copying lib/bx/pwm/pwm_tests.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,936 copying lib/bx/pwm/maf_select_motifs.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,937 copying lib/bx/pwm/pwm_score_motifs.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,939 copying lib/bx/pwm/__init__.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,941 copying lib/bx/pwm/bed_score_aligned_string.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,942 copying lib/bx/pwm/pwm_score_positions.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T03:26:40,945 creating build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,946 copying lib/bx/intervals/operations/base_coverage.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,947 copying lib/bx/intervals/operations/quicksect.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,949 copying lib/bx/intervals/operations/intersect.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,951 copying lib/bx/intervals/operations/join.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,953 copying lib/bx/intervals/operations/concat.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,954 copying lib/bx/intervals/operations/__init__.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,956 copying lib/bx/intervals/operations/find_clusters.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,958 copying lib/bx/intervals/operations/complement.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,960 copying lib/bx/intervals/operations/subtract.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,961 copying lib/bx/intervals/operations/coverage.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,963 copying lib/bx/intervals/operations/merge.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T03:26:40,965 creating build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T03:26:40,966 copying lib/bx/motif/io/transfac.py -> build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T03:26:40,968 copying lib/bx/motif/io/__init__.py -> build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T03:26:40,970 copying lib/bx/motif/io/transfac_tests.py -> build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T03:26:40,972 creating build/lib.linux-armv7l-3.9/bx/motif/logo 2021-07-15T03:26:40,973 copying lib/bx/motif/logo/__init__.py -> build/lib.linux-armv7l-3.9/bx/motif/logo 2021-07-15T03:26:40,975 creating build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T03:26:40,976 copying lib/bx/align/tools/thread.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T03:26:40,978 copying lib/bx/align/tools/chop.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T03:26:40,979 copying lib/bx/align/tools/tile.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T03:26:40,981 copying lib/bx/align/tools/__init__.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T03:26:40,983 copying lib/bx/align/tools/fuse.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T03:26:40,985 creating build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T03:26:40,986 copying lib/bx/align/sitemask/quality.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T03:26:40,988 copying lib/bx/align/sitemask/core.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T03:26:40,990 copying lib/bx/align/sitemask/sitemask_tests.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T03:26:40,992 copying lib/bx/align/sitemask/cpg.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T03:26:40,993 copying lib/bx/align/sitemask/__init__.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T03:26:40,995 copying lib/bx/motif/logo/template.ps -> build/lib.linux-armv7l-3.9/bx/motif/logo 2021-07-15T03:26:41,146 Skipping optional fixer: buffer 2021-07-15T03:26:41,233 Skipping optional fixer: idioms 2021-07-15T03:26:41,402 Skipping optional fixer: set_literal 2021-07-15T03:26:41,502 Skipping optional fixer: ws_comma 2021-07-15T03:27:04,406 running build_ext 2021-07-15T03:27:04,472 skipping 'lib/bx/bitset.c' Cython extension (up-to-date) 2021-07-15T03:27:04,472 skipping 'lib/bx/intervals/intersection.c' Cython extension (up-to-date) 2021-07-15T03:27:04,473 skipping 'lib/bx/align/_core.c' Cython extension (up-to-date) 2021-07-15T03:27:04,474 skipping 'lib/bx/seq/_nib.c' Cython extension (up-to-date) 2021-07-15T03:27:04,474 skipping 'lib/bx/seq/_twobit.c' Cython extension (up-to-date) 2021-07-15T03:27:04,475 skipping 'lib/bx/_seqmapping.c' Cython extension (up-to-date) 2021-07-15T03:27:04,476 skipping 'lib/bx/misc/bgzf.c' Cython extension (up-to-date) 2021-07-15T03:27:04,477 skipping 'lib/bx/intervals/cluster.c' Cython extension (up-to-date) 2021-07-15T03:27:04,477 skipping 'lib/bx/pwm/_position_weight_matrix.c' Cython extension (up-to-date) 2021-07-15T03:27:04,478 skipping 'lib/bx/motif/_pwm.c' Cython extension (up-to-date) 2021-07-15T03:27:04,479 skipping 'lib/bx/arrays/array_tree.c' Cython extension (up-to-date) 2021-07-15T03:27:04,479 skipping 'lib/bx/bbi/bpt_file.c' Cython extension (up-to-date) 2021-07-15T03:27:04,480 skipping 'lib/bx/bbi/cirtree_file.c' Cython extension (up-to-date) 2021-07-15T03:27:04,481 skipping 'lib/bx/bbi/bbi_file.c' Cython extension (up-to-date) 2021-07-15T03:27:04,481 skipping 'lib/bx/bbi/bigwig_file.c' Cython extension (up-to-date) 2021-07-15T03:27:04,482 skipping 'lib/bx/bbi/bigbed_file.c' Cython extension (up-to-date) 2021-07-15T03:27:04,483 skipping 'lib/bx/align/_epo.c' Cython extension (up-to-date) 2021-07-15T03:27:04,484 skipping 'lib/bx/arrays/bed.c' Cython extension (up-to-date) 2021-07-15T03:27:04,484 skipping 'lib/bx/arrays/wiggle.c' Cython extension (up-to-date) 2021-07-15T03:27:04,485 skipping 'lib/bx/align/sitemask/_cpg.c' Cython extension (up-to-date) 2021-07-15T03:27:04,486 skipping 'lib/bx/intseq/ngramcount.c' Cython extension (up-to-date) 2021-07-15T03:27:04,486 skipping 'lib/bx/misc/_seekbzip2.c' Cython extension (up-to-date) 2021-07-15T03:27:04,487 building 'bx.bitset' extension 2021-07-15T03:27:04,487 creating build/temp.linux-armv7l-3.9 2021-07-15T03:27:04,488 creating build/temp.linux-armv7l-3.9/lib 2021-07-15T03:27:04,488 creating build/temp.linux-armv7l-3.9/lib/bx 2021-07-15T03:27:04,489 creating build/temp.linux-armv7l-3.9/src 2021-07-15T03:27:04,490 creating build/temp.linux-armv7l-3.9/src/kent 2021-07-15T03:27:04,491 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c lib/bx/bitset.c -o build/temp.linux-armv7l-3.9/lib/bx/bitset.o 2021-07-15T03:27:04,991 lib/bx/bitset.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:04,994 lib/bx/bitset.c:6759:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:04,994 6759 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:04,994 | ^ 2021-07-15T03:27:04,995 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:04,995 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:04,996 from lib/bx/bitset.c:4: 2021-07-15T03:27:04,996 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:04,996 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:04,996 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,000 lib/bx/bitset.c:6759:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,000 6759 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,000 | ^ 2021-07-15T03:27:05,001 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,001 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,001 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,001 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:05,001 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:05,001 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,005 lib/bx/bitset.c:6759:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,005 6759 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,006 | ^ 2021-07-15T03:27:05,006 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,006 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,006 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,006 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,006 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,006 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,010 lib/bx/bitset.c:6759:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,011 6759 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,011 | ^ 2021-07-15T03:27:05,011 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,011 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,011 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,011 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,011 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,012 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,016 lib/bx/bitset.c:6759:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,016 6759 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,016 | ^ 2021-07-15T03:27:05,016 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,016 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,016 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,016 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:05,017 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:05,017 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,021 lib/bx/bitset.c:6759:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,021 6759 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,021 | ^ 2021-07-15T03:27:05,021 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,021 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,022 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,022 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,022 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,022 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,027 lib/bx/bitset.c:6775:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,027 6775 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,027 | ^ 2021-07-15T03:27:05,028 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,028 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,028 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,028 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,028 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,028 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,032 lib/bx/bitset.c:6775:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,033 6775 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,033 | ^ 2021-07-15T03:27:05,033 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,033 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,033 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,033 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:05,033 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:05,034 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,038 lib/bx/bitset.c:6775:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,038 6775 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,038 | ^ 2021-07-15T03:27:05,038 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,038 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,038 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,038 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,039 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,039 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,043 lib/bx/bitset.c:6775:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,043 6775 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,043 | ^ 2021-07-15T03:27:05,043 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,043 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,044 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,044 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,044 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,044 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,048 lib/bx/bitset.c:6775:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,048 6775 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,048 | ^ 2021-07-15T03:27:05,048 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,049 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,049 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,049 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:05,049 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:05,049 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:05,053 lib/bx/bitset.c:6775:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:05,053 6775 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:05,053 | ^ 2021-07-15T03:27:05,054 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:05,054 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:05,054 from lib/bx/bitset.c:4: 2021-07-15T03:27:05,054 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:05,054 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:05,054 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:09,979 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c src/binBits.c -o build/temp.linux-armv7l-3.9/src/binBits.o 2021-07-15T03:27:10,383 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c src/kent/bits.c -o build/temp.linux-armv7l-3.9/src/kent/bits.o 2021-07-15T03:27:10,525 src/kent/bits.c:9:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 2021-07-15T03:27:10,525 9 | static char const rcsid[] = "$Id: bits.c,v 1.20 2008/03/25 16:32:31 angie Exp $"; 2021-07-15T03:27:10,525 | ^~~~~ 2021-07-15T03:27:10,800 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c src/kent/common.c -o build/temp.linux-armv7l-3.9/src/kent/common.o 2021-07-15T03:27:11,001 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bitset.o build/temp.linux-armv7l-3.9/src/binBits.o build/temp.linux-armv7l-3.9/src/kent/bits.o build/temp.linux-armv7l-3.9/src/kent/common.o -o build/lib.linux-armv7l-3.9/bx/bitset.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:11,134 building 'bx.intervals.intersection' extension 2021-07-15T03:27:11,135 creating build/temp.linux-armv7l-3.9/lib/bx/intervals 2021-07-15T03:27:11,135 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/intervals/intersection.c -o build/temp.linux-armv7l-3.9/lib/bx/intervals/intersection.o 2021-07-15T03:27:11,668 lib/bx/intervals/intersection.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:11,674 lib/bx/intervals/intersection.c:10372:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,674 10372 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,674 | ^ 2021-07-15T03:27:11,675 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,675 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,675 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,675 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,675 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,676 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,682 lib/bx/intervals/intersection.c:10372:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,682 10372 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,682 | ^ 2021-07-15T03:27:11,683 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,683 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,683 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,683 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:11,683 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:11,683 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,690 lib/bx/intervals/intersection.c:10372:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,690 10372 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,690 | ^ 2021-07-15T03:27:11,690 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,690 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,690 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,691 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,691 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,691 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,697 lib/bx/intervals/intersection.c:10372:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,697 10372 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,698 | ^ 2021-07-15T03:27:11,698 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,698 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,698 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,698 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,698 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,698 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,705 lib/bx/intervals/intersection.c:10372:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,705 10372 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,705 | ^ 2021-07-15T03:27:11,705 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,705 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,706 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,706 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:11,706 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:11,706 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,712 lib/bx/intervals/intersection.c:10372:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,713 10372 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,713 | ^ 2021-07-15T03:27:11,713 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,713 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,713 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,713 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,714 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,714 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,722 lib/bx/intervals/intersection.c:10388:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,722 10388 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,722 | ^ 2021-07-15T03:27:11,722 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,722 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,723 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,723 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,723 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,723 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,729 lib/bx/intervals/intersection.c:10388:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,730 10388 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,730 | ^ 2021-07-15T03:27:11,730 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,730 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,730 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,730 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:11,730 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:11,730 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,737 lib/bx/intervals/intersection.c:10388:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,737 10388 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,737 | ^ 2021-07-15T03:27:11,737 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,738 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,738 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,738 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,738 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,738 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,744 lib/bx/intervals/intersection.c:10388:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,745 10388 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,745 | ^ 2021-07-15T03:27:11,745 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,745 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,745 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,745 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,746 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,746 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,752 lib/bx/intervals/intersection.c:10388:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,752 10388 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,752 | ^ 2021-07-15T03:27:11,753 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,753 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,753 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,753 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:11,753 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:11,753 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:11,760 lib/bx/intervals/intersection.c:10388:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:11,760 10388 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:11,760 | ^ 2021-07-15T03:27:11,760 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:11,760 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:11,760 from lib/bx/intervals/intersection.c:4: 2021-07-15T03:27:11,760 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:11,761 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:11,761 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,431 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/intervals/intersection.o -o build/lib.linux-armv7l-3.9/bx/intervals/intersection.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:20,566 building 'bx.align._core' extension 2021-07-15T03:27:20,566 creating build/temp.linux-armv7l-3.9/lib/bx/align 2021-07-15T03:27:20,567 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/align/_core.c -o build/temp.linux-armv7l-3.9/lib/bx/align/_core.o 2021-07-15T03:27:20,921 lib/bx/align/_core.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:20,922 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,922 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,922 | ^ 2021-07-15T03:27:20,922 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,922 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,923 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,923 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,923 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,923 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,923 lib/bx/align/_core.c:1729:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,923 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,924 | ^ 2021-07-15T03:27:20,924 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,924 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,924 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,924 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:20,924 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:20,924 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,924 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,925 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,925 | ^ 2021-07-15T03:27:20,925 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,925 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,925 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,925 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,925 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,925 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,925 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,926 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,926 | ^ 2021-07-15T03:27:20,926 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,926 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,926 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,926 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,926 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,926 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,926 lib/bx/align/_core.c:1729:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,927 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,927 | ^ 2021-07-15T03:27:20,927 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,927 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,927 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,927 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:20,927 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:20,927 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,928 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,928 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,928 | ^ 2021-07-15T03:27:20,928 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,928 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,928 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,928 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,928 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,929 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,929 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,929 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,929 | ^ 2021-07-15T03:27:20,930 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,930 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,930 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,930 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,930 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,930 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,930 lib/bx/align/_core.c:1745:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,930 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,930 | ^ 2021-07-15T03:27:20,931 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,931 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,931 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,931 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:20,931 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:20,931 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,931 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,931 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,931 | ^ 2021-07-15T03:27:20,932 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,932 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,932 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,932 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,932 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,932 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,932 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,932 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,932 | ^ 2021-07-15T03:27:20,933 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,933 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,933 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,933 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,933 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,933 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,933 lib/bx/align/_core.c:1745:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,933 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,933 | ^ 2021-07-15T03:27:20,934 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,934 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,934 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,934 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:20,934 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:20,934 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:20,934 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:20,934 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:20,935 | ^ 2021-07-15T03:27:20,935 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:20,935 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:20,935 from lib/bx/align/_core.c:4: 2021-07-15T03:27:20,935 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:20,935 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:20,935 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:21,789 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/align/_core.o -o build/lib.linux-armv7l-3.9/bx/align/_core.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:21,888 building 'bx.seq._nib' extension 2021-07-15T03:27:21,889 creating build/temp.linux-armv7l-3.9/lib/bx/seq 2021-07-15T03:27:21,894 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/seq/_nib.c -o build/temp.linux-armv7l-3.9/lib/bx/seq/_nib.o 2021-07-15T03:27:22,251 lib/bx/seq/_nib.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:22,252 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,252 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,252 | ^ 2021-07-15T03:27:22,252 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,253 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,253 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,253 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,253 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,253 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,253 lib/bx/seq/_nib.c:2041:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,254 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,254 | ^ 2021-07-15T03:27:22,254 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,254 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,254 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,254 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:22,254 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:22,254 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,255 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,255 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,255 | ^ 2021-07-15T03:27:22,255 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,255 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,255 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,255 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,255 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,255 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,256 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,256 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,256 | ^ 2021-07-15T03:27:22,256 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,256 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,256 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,256 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,256 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,256 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,257 lib/bx/seq/_nib.c:2041:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,257 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,257 | ^ 2021-07-15T03:27:22,257 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,257 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,257 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,257 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:22,257 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:22,258 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,258 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,258 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,258 | ^ 2021-07-15T03:27:22,258 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,258 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,258 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,258 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,259 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,259 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,259 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,259 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,259 | ^ 2021-07-15T03:27:22,259 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,260 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,260 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,260 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,260 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,260 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,260 lib/bx/seq/_nib.c:2057:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,260 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,260 | ^ 2021-07-15T03:27:22,261 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,261 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,261 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,261 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:22,261 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:22,261 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,261 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,261 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,261 | ^ 2021-07-15T03:27:22,262 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,262 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,262 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,262 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,262 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,262 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,262 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,262 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,262 | ^ 2021-07-15T03:27:22,263 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,263 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,263 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,263 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,263 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,263 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,263 lib/bx/seq/_nib.c:2057:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,263 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,263 | ^ 2021-07-15T03:27:22,264 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,264 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,264 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,264 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:22,264 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:22,264 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:22,264 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:22,264 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:22,264 | ^ 2021-07-15T03:27:22,265 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:22,265 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:22,265 from lib/bx/seq/_nib.c:4: 2021-07-15T03:27:22,265 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:22,265 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:22,265 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,445 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/seq/_nib.o -o build/lib.linux-armv7l-3.9/bx/seq/_nib.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:23,547 building 'bx.seq._twobit' extension 2021-07-15T03:27:23,547 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/seq/_twobit.c -o build/temp.linux-armv7l-3.9/lib/bx/seq/_twobit.o 2021-07-15T03:27:23,943 lib/bx/seq/_twobit.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:23,944 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,945 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,945 | ^ 2021-07-15T03:27:23,945 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,945 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,945 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,945 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,946 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,946 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,947 lib/bx/seq/_twobit.c:3212:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,947 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,947 | ^ 2021-07-15T03:27:23,947 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,947 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,947 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,948 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:23,948 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:23,948 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,949 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,949 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,949 | ^ 2021-07-15T03:27:23,949 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,949 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,949 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,949 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,949 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,950 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,950 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,951 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,951 | ^ 2021-07-15T03:27:23,951 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,951 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,951 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,951 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,951 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,951 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,952 lib/bx/seq/_twobit.c:3212:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,952 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,952 | ^ 2021-07-15T03:27:23,952 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,953 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,953 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,953 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:23,953 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:23,953 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,954 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,954 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,954 | ^ 2021-07-15T03:27:23,954 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,954 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,954 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,955 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,955 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,955 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,956 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,956 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,957 | ^ 2021-07-15T03:27:23,957 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,957 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,957 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,957 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,957 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,957 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,958 lib/bx/seq/_twobit.c:3228:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,958 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,958 | ^ 2021-07-15T03:27:23,958 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,959 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,959 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,959 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:23,959 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:23,959 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,960 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,960 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,960 | ^ 2021-07-15T03:27:23,960 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,960 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,960 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,961 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,961 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,961 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,962 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,962 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,962 | ^ 2021-07-15T03:27:23,962 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,962 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,962 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,962 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,962 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,963 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,963 lib/bx/seq/_twobit.c:3228:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,963 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,964 | ^ 2021-07-15T03:27:23,964 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,964 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,964 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,964 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:23,964 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:23,964 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:23,965 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:23,965 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:23,965 | ^ 2021-07-15T03:27:23,965 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:23,966 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:23,966 from lib/bx/seq/_twobit.c:4: 2021-07-15T03:27:23,966 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:23,966 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:23,966 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:26,827 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/seq/_twobit.o -o build/lib.linux-armv7l-3.9/bx/seq/_twobit.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:26,942 building 'bx._seqmapping' extension 2021-07-15T03:27:26,942 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/_seqmapping.c -o build/temp.linux-armv7l-3.9/lib/bx/_seqmapping.o 2021-07-15T03:27:27,296 lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_21CharToIntArrayMapping_6translate’: 2021-07-15T03:27:27,297 lib/bx/_seqmapping.c:1762:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,297 1762 | __pyx_t_1 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 52, __pyx_L1_error) 2021-07-15T03:27:27,297 | ^~~~~~~~~ 2021-07-15T03:27:27,297 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T03:27:27,298 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,298 /usr/include/python3.9/abstract.h:354:17: note: declared here 2021-07-15T03:27:27,298 354 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, 2021-07-15T03:27:27,298 | ^~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,302 lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_21CharToIntArrayMapping_8translate_list’: 2021-07-15T03:27:27,302 lib/bx/_seqmapping.c:1962:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,302 1962 | __pyx_t_7 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_7 == ((int)-1))) __PYX_ERR(0, 75, __pyx_L1_error) 2021-07-15T03:27:27,303 | ^~~~~~~~~ 2021-07-15T03:27:27,303 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T03:27:27,303 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,303 /usr/include/python3.9/abstract.h:354:17: note: declared here 2021-07-15T03:27:27,303 354 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, 2021-07-15T03:27:27,303 | ^~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,319 lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_15IntToIntMapping_6translate’: 2021-07-15T03:27:27,321 lib/bx/_seqmapping.c:3007:3: warning: ‘PyObject_AsReadBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,321 3007 | __pyx_t_1 = PyObject_AsReadBuffer(__pyx_v_src, ((void const **)(&__pyx_v_s_buf)), (&__pyx_v_s_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 132, __pyx_L1_error) 2021-07-15T03:27:27,321 | ^~~~~~~~~ 2021-07-15T03:27:27,321 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T03:27:27,321 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,321 /usr/include/python3.9/abstract.h:343:17: note: declared here 2021-07-15T03:27:27,322 343 | PyAPI_FUNC(int) PyObject_AsReadBuffer(PyObject *obj, 2021-07-15T03:27:27,322 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,325 lib/bx/_seqmapping.c:3108:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,325 3108 | __pyx_t_1 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 137, __pyx_L1_error) 2021-07-15T03:27:27,325 | ^~~~~~~~~ 2021-07-15T03:27:27,325 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T03:27:27,326 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,326 /usr/include/python3.9/abstract.h:354:17: note: declared here 2021-07-15T03:27:27,326 354 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, 2021-07-15T03:27:27,326 | ^~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,388 lib/bx/_seqmapping.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:27,391 lib/bx/_seqmapping.c:5704:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,391 5704 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,391 | ^ 2021-07-15T03:27:27,391 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,392 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,392 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,392 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,392 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,392 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,395 lib/bx/_seqmapping.c:5704:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,395 5704 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,395 | ^ 2021-07-15T03:27:27,395 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,395 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,395 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,395 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:27,395 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:27,395 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,398 lib/bx/_seqmapping.c:5704:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,398 5704 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,398 | ^ 2021-07-15T03:27:27,399 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,399 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,399 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,399 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,399 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,399 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,401 lib/bx/_seqmapping.c:5704:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,402 5704 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,402 | ^ 2021-07-15T03:27:27,402 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,402 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,402 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,402 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,402 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,402 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,405 lib/bx/_seqmapping.c:5704:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,405 5704 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,405 | ^ 2021-07-15T03:27:27,405 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,405 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,405 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,405 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:27,405 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:27,405 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,408 lib/bx/_seqmapping.c:5704:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,408 5704 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,408 | ^ 2021-07-15T03:27:27,408 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,408 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,409 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,409 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,409 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,409 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,413 lib/bx/_seqmapping.c:5720:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,413 5720 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,413 | ^ 2021-07-15T03:27:27,413 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,413 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,413 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,414 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,414 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,414 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,416 lib/bx/_seqmapping.c:5720:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,416 5720 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,417 | ^ 2021-07-15T03:27:27,417 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,417 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,417 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,417 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:27,417 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:27,417 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,421 lib/bx/_seqmapping.c:5720:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,421 5720 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,421 | ^ 2021-07-15T03:27:27,421 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,421 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,421 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,421 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,421 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,422 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,425 lib/bx/_seqmapping.c:5720:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,425 5720 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,425 | ^ 2021-07-15T03:27:27,425 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,426 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,426 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,426 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,426 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,426 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,428 lib/bx/_seqmapping.c:5720:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,429 5720 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,429 | ^ 2021-07-15T03:27:27,429 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,429 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,429 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,429 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:27,429 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:27,429 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:27,432 lib/bx/_seqmapping.c:5720:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:27,432 5720 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:27,432 | ^ 2021-07-15T03:27:27,432 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:27,432 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:27,432 from lib/bx/_seqmapping.c:4: 2021-07-15T03:27:27,432 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:27,433 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:27,433 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,362 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/_seqmapping.o -o build/lib.linux-armv7l-3.9/bx/_seqmapping.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:32,480 building 'bx.misc.bgzf' extension 2021-07-15T03:27:32,481 creating build/temp.linux-armv7l-3.9/lib/bx/misc 2021-07-15T03:27:32,481 creating build/temp.linux-armv7l-3.9/src/samtools 2021-07-15T03:27:32,486 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/samtools -I/usr/include/python3.9 -c lib/bx/misc/bgzf.c -o build/temp.linux-armv7l-3.9/lib/bx/misc/bgzf.o 2021-07-15T03:27:32,868 lib/bx/misc/bgzf.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:32,869 lib/bx/misc/bgzf.c:2493:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,869 2493 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,869 | ^ 2021-07-15T03:27:32,869 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,870 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,870 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,870 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,870 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,870 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,871 lib/bx/misc/bgzf.c:2493:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,871 2493 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,871 | ^ 2021-07-15T03:27:32,871 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,871 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,871 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,871 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:32,871 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:32,872 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,872 lib/bx/misc/bgzf.c:2493:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,872 2493 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,872 | ^ 2021-07-15T03:27:32,872 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,872 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,872 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,873 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,873 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,873 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,873 lib/bx/misc/bgzf.c:2493:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,873 2493 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,873 | ^ 2021-07-15T03:27:32,874 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,874 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,874 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,874 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,874 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,874 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,874 lib/bx/misc/bgzf.c:2493:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,875 2493 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,875 | ^ 2021-07-15T03:27:32,875 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,875 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,875 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,875 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:32,875 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:32,875 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,876 lib/bx/misc/bgzf.c:2493:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,876 2493 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,876 | ^ 2021-07-15T03:27:32,876 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,876 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,876 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,876 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,877 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,877 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,878 lib/bx/misc/bgzf.c:2509:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,878 2509 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,878 | ^ 2021-07-15T03:27:32,878 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,878 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,878 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,879 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,879 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,879 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,879 lib/bx/misc/bgzf.c:2509:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,879 2509 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,879 | ^ 2021-07-15T03:27:32,880 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,880 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,880 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,880 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:32,880 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:32,880 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,880 lib/bx/misc/bgzf.c:2509:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,881 2509 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,881 | ^ 2021-07-15T03:27:32,881 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,881 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,881 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,881 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,881 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,881 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,882 lib/bx/misc/bgzf.c:2509:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,882 2509 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,882 | ^ 2021-07-15T03:27:32,882 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,882 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,882 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,882 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,883 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,883 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,883 lib/bx/misc/bgzf.c:2509:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,883 2509 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,883 | ^ 2021-07-15T03:27:32,883 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,883 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,884 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,884 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:32,884 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:32,884 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:32,884 lib/bx/misc/bgzf.c:2509:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:32,884 2509 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:32,885 | ^ 2021-07-15T03:27:32,885 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:32,885 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:32,885 from lib/bx/misc/bgzf.c:4: 2021-07-15T03:27:32,885 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:32,885 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:32,885 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:34,550 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/samtools -I/usr/include/python3.9 -c src/samtools/bgzf.c -o build/temp.linux-armv7l-3.9/src/samtools/bgzf.o 2021-07-15T03:27:34,701 src/samtools/bgzf.c: In function ‘cache_block’: 2021-07-15T03:27:34,702 src/samtools/bgzf.c:422:40: warning: comparison of integer expressions of different signedness: ‘khint_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-15T03:27:34,702 422 | if ((kh_size(h) + 1) * MAX_BLOCK_SIZE > fp->cache_size) { 2021-07-15T03:27:34,702 | ^ 2021-07-15T03:27:34,702 src/samtools/bgzf.c: In function ‘read_block’: 2021-07-15T03:27:34,703 src/samtools/bgzf.c:462:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2021-07-15T03:27:34,703 462 | if (count != sizeof(header)) { 2021-07-15T03:27:34,703 | ^~ 2021-07-15T03:27:34,705 src/samtools/bgzf.c: In function ‘bgzf_close’: 2021-07-15T03:27:34,705 src/samtools/bgzf.c:603:8: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 2021-07-15T03:27:34,705 603 | int count, block_length = deflate_block(fp, 0); 2021-07-15T03:27:34,705 | ^~~~~ 2021-07-15T03:27:35,387 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/misc/bgzf.o build/temp.linux-armv7l-3.9/src/samtools/bgzf.o -lz -o build/lib.linux-armv7l-3.9/bx/misc/bgzf.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:35,507 building 'bx.intervals.cluster' extension 2021-07-15T03:27:35,507 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c lib/bx/intervals/cluster.c -o build/temp.linux-armv7l-3.9/lib/bx/intervals/cluster.o 2021-07-15T03:27:35,881 lib/bx/intervals/cluster.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:35,882 lib/bx/intervals/cluster.c:2646:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,882 2646 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,882 | ^ 2021-07-15T03:27:35,882 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,882 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,883 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,883 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,883 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,883 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,884 lib/bx/intervals/cluster.c:2646:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,884 2646 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,884 | ^ 2021-07-15T03:27:35,884 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,884 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,884 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,884 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:35,884 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:35,885 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,885 lib/bx/intervals/cluster.c:2646:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,885 2646 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,885 | ^ 2021-07-15T03:27:35,885 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,886 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,886 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,886 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,886 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,886 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,886 lib/bx/intervals/cluster.c:2646:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,887 2646 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,887 | ^ 2021-07-15T03:27:35,887 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,887 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,887 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,887 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,887 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,887 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,888 lib/bx/intervals/cluster.c:2646:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,888 2646 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,888 | ^ 2021-07-15T03:27:35,888 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,888 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,888 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,888 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:35,889 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:35,889 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,889 lib/bx/intervals/cluster.c:2646:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,889 2646 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,889 | ^ 2021-07-15T03:27:35,890 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,890 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,890 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,890 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,890 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,890 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,891 lib/bx/intervals/cluster.c:2662:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,891 2662 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,891 | ^ 2021-07-15T03:27:35,892 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,892 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,892 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,892 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,892 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,892 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,893 lib/bx/intervals/cluster.c:2662:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,893 2662 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,893 | ^ 2021-07-15T03:27:35,893 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,893 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,893 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,893 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:35,893 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:35,893 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,894 lib/bx/intervals/cluster.c:2662:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,894 2662 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,894 | ^ 2021-07-15T03:27:35,894 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,894 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,895 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,895 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,895 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,895 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,895 lib/bx/intervals/cluster.c:2662:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,895 2662 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,896 | ^ 2021-07-15T03:27:35,896 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,896 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,896 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,896 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,896 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,896 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,897 lib/bx/intervals/cluster.c:2662:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,897 2662 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,897 | ^ 2021-07-15T03:27:35,897 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,897 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,897 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,897 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:35,898 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:35,898 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:35,898 lib/bx/intervals/cluster.c:2662:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:35,898 2662 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:35,898 | ^ 2021-07-15T03:27:35,899 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:35,899 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:35,899 from lib/bx/intervals/cluster.c:4: 2021-07-15T03:27:35,899 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:35,899 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:35,899 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:37,555 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c src/cluster.c -o build/temp.linux-armv7l-3.9/src/cluster.o 2021-07-15T03:27:38,049 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/intervals/cluster.o build/temp.linux-armv7l-3.9/src/cluster.o -o build/lib.linux-armv7l-3.9/bx/intervals/cluster.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:38,156 building 'bx.pwm._position_weight_matrix' extension 2021-07-15T03:27:38,157 creating build/temp.linux-armv7l-3.9/lib/bx/pwm 2021-07-15T03:27:38,157 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c lib/bx/pwm/_position_weight_matrix.c -o build/temp.linux-armv7l-3.9/lib/bx/pwm/_position_weight_matrix.o 2021-07-15T03:27:38,514 lib/bx/pwm/_position_weight_matrix.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:38,514 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,515 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,515 | ^ 2021-07-15T03:27:38,515 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,515 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,515 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,515 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,516 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,516 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,516 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,516 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,516 | ^ 2021-07-15T03:27:38,516 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,516 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,516 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,516 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:38,517 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:38,517 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,517 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,517 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,517 | ^ 2021-07-15T03:27:38,517 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,517 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,517 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,518 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,518 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,518 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,518 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,518 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,518 | ^ 2021-07-15T03:27:38,518 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,518 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,518 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,519 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,519 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,519 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,519 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,519 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,519 | ^ 2021-07-15T03:27:38,519 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,519 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,520 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,520 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:38,520 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:38,520 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,520 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,520 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,520 | ^ 2021-07-15T03:27:38,520 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,520 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,521 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,521 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,521 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,521 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,521 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,521 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,521 | ^ 2021-07-15T03:27:38,521 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,522 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,522 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,522 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,522 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,522 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,522 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,522 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,522 | ^ 2021-07-15T03:27:38,522 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,523 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,523 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,523 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:38,523 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:38,523 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,523 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,523 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,523 | ^ 2021-07-15T03:27:38,523 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,524 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,524 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,524 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,524 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,524 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,524 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,524 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,524 | ^ 2021-07-15T03:27:38,524 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,525 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,525 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,525 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,525 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,525 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,525 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,525 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,525 | ^ 2021-07-15T03:27:38,526 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,526 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,526 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,526 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:38,526 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:38,526 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:38,526 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:38,526 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:38,527 | ^ 2021-07-15T03:27:38,527 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:38,527 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:38,527 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T03:27:38,527 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:38,527 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:38,527 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:39,336 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c src/pwm_utils.c -o build/temp.linux-armv7l-3.9/src/pwm_utils.o 2021-07-15T03:27:39,408 src/pwm_utils.c: In function ‘main’: 2021-07-15T03:27:39,408 src/pwm_utils.c:11:27: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 2021-07-15T03:27:39,409 11 | int string_size = strlen(argv[1]); 2021-07-15T03:27:39,409 | ^~~~~~ 2021-07-15T03:27:39,409 src/pwm_utils.c:11:27: warning: incompatible implicit declaration of built-in function ‘strlen’ 2021-07-15T03:27:39,409 src/pwm_utils.c:5:1: note: include ‘’ or provide a declaration of ‘strlen’ 2021-07-15T03:27:39,409 4 | #include 2021-07-15T03:27:39,409 +++ |+#include 2021-07-15T03:27:39,410 5 | 2021-07-15T03:27:39,410 src/pwm_utils.c:12:29: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T03:27:39,410 12 | if (strlen(argv[2]) != string_size) { 2021-07-15T03:27:39,410 | ^~ 2021-07-15T03:27:39,507 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/pwm/_position_weight_matrix.o build/temp.linux-armv7l-3.9/src/pwm_utils.o -o build/lib.linux-armv7l-3.9/bx/pwm/_position_weight_matrix.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:39,609 building 'bx.motif._pwm' extension 2021-07-15T03:27:39,610 creating build/temp.linux-armv7l-3.9/lib/bx/motif 2021-07-15T03:27:39,614 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/motif/_pwm.c -o build/temp.linux-armv7l-3.9/lib/bx/motif/_pwm.o 2021-07-15T03:27:39,962 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T03:27:39,962 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T03:27:39,962 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:27:39,963 from lib/bx/motif/_pwm.c:596: 2021-07-15T03:27:39,963 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T03:27:39,963 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T03:27:39,963 | ^~~~~~~ 2021-07-15T03:27:40,019 lib/bx/motif/_pwm.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:40,020 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,020 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,020 | ^ 2021-07-15T03:27:40,020 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,020 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,021 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,021 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,021 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,021 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,022 lib/bx/motif/_pwm.c:2443:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,022 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,022 | ^ 2021-07-15T03:27:40,022 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,022 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,022 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,022 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:40,022 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:40,022 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,023 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,023 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,023 | ^ 2021-07-15T03:27:40,023 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,023 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,023 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,024 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,024 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,024 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,024 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,024 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,024 | ^ 2021-07-15T03:27:40,025 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,025 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,025 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,025 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,025 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,025 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,025 lib/bx/motif/_pwm.c:2443:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,025 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,026 | ^ 2021-07-15T03:27:40,026 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,026 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,026 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,026 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:40,026 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:40,026 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,027 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,027 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,027 | ^ 2021-07-15T03:27:40,027 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,027 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,027 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,028 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,028 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,028 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,029 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,029 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,029 | ^ 2021-07-15T03:27:40,029 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,029 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,029 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,029 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,029 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,029 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,030 lib/bx/motif/_pwm.c:2459:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,030 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,030 | ^ 2021-07-15T03:27:40,030 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,030 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,030 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,031 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:40,031 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:40,031 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,031 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,031 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,031 | ^ 2021-07-15T03:27:40,032 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,032 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,032 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,032 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,032 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,032 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,032 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,033 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,033 | ^ 2021-07-15T03:27:40,033 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,033 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,033 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,033 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,033 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,033 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,034 lib/bx/motif/_pwm.c:2459:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,034 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,034 | ^ 2021-07-15T03:27:40,034 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,034 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,034 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,034 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:40,034 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:40,035 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,035 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:40,035 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:40,035 | ^ 2021-07-15T03:27:40,035 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:40,035 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:40,036 from lib/bx/motif/_pwm.c:4: 2021-07-15T03:27:40,036 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:40,036 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:40,036 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:40,104 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, 2021-07-15T03:27:40,104 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:27:40,104 from lib/bx/motif/_pwm.c:596: 2021-07-15T03:27:40,104 At top level: 2021-07-15T03:27:40,105 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1464:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 2021-07-15T03:27:40,105 1464 | _import_array(void) 2021-07-15T03:27:40,105 | ^~~~~~~~~~~~~ 2021-07-15T03:27:41,437 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/motif/_pwm.o -o build/lib.linux-armv7l-3.9/bx/motif/_pwm.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:27:41,539 building 'bx.arrays.array_tree' extension 2021-07-15T03:27:41,540 creating build/temp.linux-armv7l-3.9/lib/bx/arrays 2021-07-15T03:27:41,545 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/arrays/array_tree.c -o build/temp.linux-armv7l-3.9/lib/bx/arrays/array_tree.o 2021-07-15T03:27:41,896 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T03:27:41,897 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T03:27:41,897 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:27:41,897 from lib/bx/arrays/array_tree.c:598: 2021-07-15T03:27:41,897 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T03:27:41,897 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T03:27:41,897 | ^~~~~~~ 2021-07-15T03:27:42,450 lib/bx/arrays/array_tree.c: In function ‘__Pyx_import_all_from’: 2021-07-15T03:27:42,462 lib/bx/arrays/array_tree.c:21712:13: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,462 21712 | PyUnicode_AS_UNICODE(name)[0] == '_') 2021-07-15T03:27:42,462 | ^~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,462 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,462 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,462 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,463 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:42,463 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:42,463 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,619 lib/bx/arrays/array_tree.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:27:42,631 lib/bx/arrays/array_tree.c:22991:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,632 22991 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,632 | ^ 2021-07-15T03:27:42,632 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,632 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,632 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,632 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,632 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,633 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,646 lib/bx/arrays/array_tree.c:22991:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,647 22991 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,647 | ^ 2021-07-15T03:27:42,647 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,647 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,647 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,647 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:42,648 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:42,648 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,661 lib/bx/arrays/array_tree.c:22991:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,661 22991 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,661 | ^ 2021-07-15T03:27:42,662 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,662 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,662 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,662 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,662 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,662 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,675 lib/bx/arrays/array_tree.c:22991:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,676 22991 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,676 | ^ 2021-07-15T03:27:42,676 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,676 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,676 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,676 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,677 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,677 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,690 lib/bx/arrays/array_tree.c:22991:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,691 22991 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,691 | ^ 2021-07-15T03:27:42,691 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,691 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,691 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,691 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:42,691 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:42,692 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,705 lib/bx/arrays/array_tree.c:22991:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,705 22991 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,705 | ^ 2021-07-15T03:27:42,705 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,706 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,706 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,706 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,706 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,706 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,722 lib/bx/arrays/array_tree.c:23007:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,723 23007 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,723 | ^ 2021-07-15T03:27:42,723 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,723 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,723 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,723 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,723 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,723 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,736 lib/bx/arrays/array_tree.c:23007:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,737 23007 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,737 | ^ 2021-07-15T03:27:42,737 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,737 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,737 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,737 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:42,738 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:42,738 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,751 lib/bx/arrays/array_tree.c:23007:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,751 23007 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,751 | ^ 2021-07-15T03:27:42,751 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,752 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,752 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,752 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,752 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,752 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,766 lib/bx/arrays/array_tree.c:23007:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,766 23007 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,766 | ^ 2021-07-15T03:27:42,766 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,766 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,766 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,766 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,767 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,767 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,780 lib/bx/arrays/array_tree.c:23007:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,780 23007 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,780 | ^ 2021-07-15T03:27:42,781 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,781 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,781 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,781 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:27:42,781 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:27:42,781 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:27:42,795 lib/bx/arrays/array_tree.c:23007:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:27:42,795 23007 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:27:42,795 | ^ 2021-07-15T03:27:42,795 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:27:42,795 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:27:42,795 from lib/bx/arrays/array_tree.c:4: 2021-07-15T03:27:42,796 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:27:42,796 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:27:42,796 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,088 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/arrays/array_tree.o -o build/lib.linux-armv7l-3.9/bx/arrays/array_tree.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:28:07,284 building 'bx.bbi.bpt_file' extension 2021-07-15T03:28:07,285 creating build/temp.linux-armv7l-3.9/lib/bx/bbi 2021-07-15T03:28:07,289 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/bbi/bpt_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bpt_file.o 2021-07-15T03:28:07,659 lib/bx/bbi/bpt_file.c: In function ‘__pyx_pf_2bx_3bbi_8bpt_file_7BPTFile_6find’: 2021-07-15T03:28:07,660 lib/bx/bbi/bpt_file.c:2476:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T03:28:07,661 2476 | __pyx_t_2 = ((__pyx_t_1 > __pyx_v_self->key_size) != 0); 2021-07-15T03:28:07,661 | ^ 2021-07-15T03:28:07,663 lib/bx/bbi/bpt_file.c:2507:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T03:28:07,663 2507 | __pyx_t_2 = ((__pyx_t_1 < __pyx_v_self->key_size) != 0); 2021-07-15T03:28:07,663 | ^ 2021-07-15T03:28:07,713 lib/bx/bbi/bpt_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:28:07,716 lib/bx/bbi/bpt_file.c:4085:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,716 4085 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,716 | ^ 2021-07-15T03:28:07,717 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,717 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,717 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,717 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,717 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,717 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,721 lib/bx/bbi/bpt_file.c:4085:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,721 4085 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,721 | ^ 2021-07-15T03:28:07,721 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,721 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,722 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,722 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:07,722 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:07,722 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,725 lib/bx/bbi/bpt_file.c:4085:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,725 4085 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,725 | ^ 2021-07-15T03:28:07,726 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,726 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,726 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,726 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,726 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,726 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,729 lib/bx/bbi/bpt_file.c:4085:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,730 4085 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,730 | ^ 2021-07-15T03:28:07,730 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,730 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,730 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,730 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,730 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,730 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,734 lib/bx/bbi/bpt_file.c:4085:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,734 4085 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,734 | ^ 2021-07-15T03:28:07,734 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,734 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,734 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,734 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:07,735 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:07,735 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,738 lib/bx/bbi/bpt_file.c:4085:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,738 4085 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,738 | ^ 2021-07-15T03:28:07,738 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,738 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,739 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,739 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,739 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,739 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,743 lib/bx/bbi/bpt_file.c:4101:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,743 4101 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,743 | ^ 2021-07-15T03:28:07,744 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,744 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,744 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,744 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,744 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,744 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,747 lib/bx/bbi/bpt_file.c:4101:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,747 4101 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,748 | ^ 2021-07-15T03:28:07,748 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,748 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,748 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,748 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:07,748 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:07,748 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,752 lib/bx/bbi/bpt_file.c:4101:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,752 4101 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,752 | ^ 2021-07-15T03:28:07,752 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,752 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,752 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,752 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,753 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,753 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,756 lib/bx/bbi/bpt_file.c:4101:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,756 4101 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,756 | ^ 2021-07-15T03:28:07,756 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,757 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,757 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,757 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,757 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,757 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,760 lib/bx/bbi/bpt_file.c:4101:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,760 4101 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,760 | ^ 2021-07-15T03:28:07,761 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,761 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,761 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,761 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:07,761 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:07,761 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:07,764 lib/bx/bbi/bpt_file.c:4101:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:07,765 4101 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:07,765 | ^ 2021-07-15T03:28:07,765 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:07,765 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:07,765 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T03:28:07,765 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:07,765 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:07,766 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,160 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bpt_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bpt_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:28:13,293 building 'bx.bbi.cirtree_file' extension 2021-07-15T03:28:13,293 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/bbi/cirtree_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/cirtree_file.o 2021-07-15T03:28:13,745 lib/bx/bbi/cirtree_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:28:13,748 lib/bx/bbi/cirtree_file.c:5461:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,749 5461 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,749 | ^ 2021-07-15T03:28:13,750 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,750 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,750 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,750 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,750 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,750 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,754 lib/bx/bbi/cirtree_file.c:5461:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,754 5461 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,754 | ^ 2021-07-15T03:28:13,754 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,754 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,754 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,754 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:13,755 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:13,755 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,758 lib/bx/bbi/cirtree_file.c:5461:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,758 5461 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,759 | ^ 2021-07-15T03:28:13,759 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,759 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,759 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,759 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,759 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,759 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,763 lib/bx/bbi/cirtree_file.c:5461:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,763 5461 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,763 | ^ 2021-07-15T03:28:13,763 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,763 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,764 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,764 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,764 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,764 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,767 lib/bx/bbi/cirtree_file.c:5461:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,767 5461 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,768 | ^ 2021-07-15T03:28:13,768 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,768 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,768 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,768 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:13,768 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:13,768 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,772 lib/bx/bbi/cirtree_file.c:5461:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,772 5461 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,772 | ^ 2021-07-15T03:28:13,772 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,772 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,772 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,773 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,773 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,773 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,777 lib/bx/bbi/cirtree_file.c:5477:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,777 5477 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,778 | ^ 2021-07-15T03:28:13,778 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,778 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,778 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,778 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,778 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,778 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,782 lib/bx/bbi/cirtree_file.c:5477:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,782 5477 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,782 | ^ 2021-07-15T03:28:13,782 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,782 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,783 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,783 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:13,783 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:13,783 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,786 lib/bx/bbi/cirtree_file.c:5477:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,787 5477 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,787 | ^ 2021-07-15T03:28:13,787 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,787 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,787 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,787 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,787 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,787 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,791 lib/bx/bbi/cirtree_file.c:5477:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,791 5477 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,791 | ^ 2021-07-15T03:28:13,791 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,792 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,792 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,792 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,792 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,792 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,795 lib/bx/bbi/cirtree_file.c:5477:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,796 5477 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,796 | ^ 2021-07-15T03:28:13,796 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,796 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,796 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,796 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:13,796 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:13,796 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:13,800 lib/bx/bbi/cirtree_file.c:5477:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:13,800 5477 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:13,800 | ^ 2021-07-15T03:28:13,800 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:13,800 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:13,801 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T03:28:13,801 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:13,801 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:13,801 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:22,967 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/cirtree_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/cirtree_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:28:23,105 building 'bx.bbi.bbi_file' extension 2021-07-15T03:28:23,105 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/bbi/bbi_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bbi_file.o 2021-07-15T03:28:23,456 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T03:28:23,457 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T03:28:23,457 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:28:23,457 from lib/bx/bbi/bbi_file.c:598: 2021-07-15T03:28:23,457 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T03:28:23,457 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T03:28:23,458 | ^~~~~~~ 2021-07-15T03:28:24,030 lib/bx/bbi/bbi_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:28:24,040 lib/bx/bbi/bbi_file.c:19505:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,040 19505 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,040 | ^ 2021-07-15T03:28:24,041 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,041 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,041 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,041 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,041 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,041 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,053 lib/bx/bbi/bbi_file.c:19505:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,053 19505 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,053 | ^ 2021-07-15T03:28:24,053 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,053 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,054 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,054 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:24,054 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:24,054 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,065 lib/bx/bbi/bbi_file.c:19505:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,065 19505 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,065 | ^ 2021-07-15T03:28:24,066 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,066 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,066 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,066 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,066 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,066 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,077 lib/bx/bbi/bbi_file.c:19505:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,077 19505 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,078 | ^ 2021-07-15T03:28:24,078 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,078 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,078 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,078 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,078 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,078 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,089 lib/bx/bbi/bbi_file.c:19505:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,090 19505 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,090 | ^ 2021-07-15T03:28:24,090 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,090 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,090 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,090 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:24,090 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:24,090 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,102 lib/bx/bbi/bbi_file.c:19505:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,102 19505 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,102 | ^ 2021-07-15T03:28:24,102 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,102 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,102 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,102 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,103 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,103 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,116 lib/bx/bbi/bbi_file.c:19521:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,116 19521 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,117 | ^ 2021-07-15T03:28:24,117 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,117 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,117 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,117 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,117 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,117 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,128 lib/bx/bbi/bbi_file.c:19521:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,129 19521 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,129 | ^ 2021-07-15T03:28:24,129 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,129 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,129 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,129 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:24,129 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:24,129 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,141 lib/bx/bbi/bbi_file.c:19521:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,141 19521 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,141 | ^ 2021-07-15T03:28:24,141 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,141 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,141 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,142 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,142 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,142 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,153 lib/bx/bbi/bbi_file.c:19521:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,153 19521 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,153 | ^ 2021-07-15T03:28:24,153 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,154 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,154 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,154 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,154 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,154 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,165 lib/bx/bbi/bbi_file.c:19521:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,165 19521 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,165 | ^ 2021-07-15T03:28:24,166 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,166 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,166 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,166 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:24,166 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:24,166 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:24,177 lib/bx/bbi/bbi_file.c:19521:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:24,178 19521 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:24,178 | ^ 2021-07-15T03:28:24,178 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:24,178 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:24,178 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T03:28:24,178 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:24,178 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:24,178 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:44,527 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bbi_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bbi_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:28:44,711 building 'bx.bbi.bigwig_file' extension 2021-07-15T03:28:44,711 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/bbi/bigwig_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bigwig_file.o 2021-07-15T03:28:45,073 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T03:28:45,073 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T03:28:45,073 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:28:45,074 from lib/bx/bbi/bigwig_file.c:598: 2021-07-15T03:28:45,074 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T03:28:45,074 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T03:28:45,074 | ^~~~~~~ 2021-07-15T03:28:45,146 lib/bx/bbi/bigwig_file.c: In function ‘__pyx_f_2bx_3bbi_11bigwig_file_18BigWigBlockHandler_handle_block’: 2021-07-15T03:28:45,147 lib/bx/bbi/bigwig_file.c:3275:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T03:28:45,148 3275 | __pyx_t_11 = ((__pyx_v_s < __pyx_v_self->start) != 0); 2021-07-15T03:28:45,148 | ^ 2021-07-15T03:28:45,149 lib/bx/bbi/bigwig_file.c:3304:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T03:28:45,149 3304 | __pyx_t_11 = ((__pyx_v_e > __pyx_v_self->end) != 0); 2021-07-15T03:28:45,149 | ^ 2021-07-15T03:28:45,187 lib/bx/bbi/bigwig_file.c: In function ‘__pyx_f_2bx_3bbi_11bigwig_file_29ArrayAccumulatingBlockHandler_handle_interval_value’: 2021-07-15T03:28:45,189 lib/bx/bbi/bigwig_file.c:5183:76: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T03:28:45,189 5183 | for (__pyx_v_i = (__pyx_v_s - __pyx_v_self->__pyx_base.start); __pyx_v_i < __pyx_t_2; __pyx_v_i++) { 2021-07-15T03:28:45,189 | ^ 2021-07-15T03:28:45,519 lib/bx/bbi/bigwig_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:28:45,527 lib/bx/bbi/bigwig_file.c:15020:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,527 15020 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,527 | ^ 2021-07-15T03:28:45,528 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,528 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,528 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,528 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,528 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,528 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,537 lib/bx/bbi/bigwig_file.c:15020:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,537 15020 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,537 | ^ 2021-07-15T03:28:45,538 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,538 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,538 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,538 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:45,538 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:45,538 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,547 lib/bx/bbi/bigwig_file.c:15020:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,547 15020 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,547 | ^ 2021-07-15T03:28:45,547 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,547 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,547 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,548 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,548 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,548 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,556 lib/bx/bbi/bigwig_file.c:15020:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,556 15020 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,556 | ^ 2021-07-15T03:28:45,557 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,557 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,557 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,557 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,557 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,557 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,566 lib/bx/bbi/bigwig_file.c:15020:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,566 15020 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,566 | ^ 2021-07-15T03:28:45,566 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,566 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,566 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,566 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:45,567 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:45,567 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,575 lib/bx/bbi/bigwig_file.c:15020:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,575 15020 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,575 | ^ 2021-07-15T03:28:45,576 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,576 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,576 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,576 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,576 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,576 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,587 lib/bx/bbi/bigwig_file.c:15036:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,587 15036 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,587 | ^ 2021-07-15T03:28:45,587 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,587 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,587 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,587 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,588 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,588 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,596 lib/bx/bbi/bigwig_file.c:15036:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,596 15036 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,596 | ^ 2021-07-15T03:28:45,596 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,597 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,597 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,597 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:45,597 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:45,597 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,605 lib/bx/bbi/bigwig_file.c:15036:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,606 15036 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,606 | ^ 2021-07-15T03:28:45,606 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,606 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,606 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,606 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,606 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,607 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,615 lib/bx/bbi/bigwig_file.c:15036:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,615 15036 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,615 | ^ 2021-07-15T03:28:45,615 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,616 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,616 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,616 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,616 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,616 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,624 lib/bx/bbi/bigwig_file.c:15036:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,625 15036 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,625 | ^ 2021-07-15T03:28:45,625 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,625 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,625 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,625 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:28:45,625 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:28:45,625 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:45,635 lib/bx/bbi/bigwig_file.c:15036:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:28:45,636 15036 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:28:45,636 | ^ 2021-07-15T03:28:45,636 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:28:45,636 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:28:45,636 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T03:28:45,636 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:28:45,636 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:28:45,637 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:54,292 lib/bx/bbi/bigwig_file.c: In function ‘__pyx_f_2bx_3bbi_11bigwig_file_18BigWigBlockHandler_handle_block’: 2021-07-15T03:28:54,294 lib/bx/bbi/bigwig_file.c:3361:18: warning: ‘__pyx_v_val’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T03:28:54,294 3361 | __pyx_t_2 = ((struct __pyx_vtabstruct_2bx_3bbi_11bigwig_file_BigWigBlockHandler *)__pyx_v_self->__pyx_base.__pyx_vtab)->handle_interval_value(__pyx_v_self, __pyx_v_s, __pyx_v_e, __pyx_v_val); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 75, __pyx_L1_error) 2021-07-15T03:28:54,294 | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:28:54,295 lib/bx/bbi/bigwig_file.c:3304:51: warning: ‘__pyx_v_e’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T03:28:54,296 3304 | __pyx_t_11 = ((__pyx_v_e > __pyx_v_self->end) != 0); 2021-07-15T03:28:54,296 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-07-15T03:28:54,297 lib/bx/bbi/bigwig_file.c:3275:53: warning: ‘__pyx_v_s’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T03:28:54,298 3275 | __pyx_t_11 = ((__pyx_v_s < __pyx_v_self->start) != 0); 2021-07-15T03:28:54,298 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-07-15T03:29:00,251 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bigwig_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bigwig_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:00,414 building 'bx.bbi.bigbed_file' extension 2021-07-15T03:29:00,415 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/bbi/bigbed_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bigbed_file.o 2021-07-15T03:29:00,766 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T03:29:00,766 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T03:29:00,766 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:29:00,766 from lib/bx/bbi/bigbed_file.c:598: 2021-07-15T03:29:00,767 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T03:29:00,767 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T03:29:00,767 | ^~~~~~~ 2021-07-15T03:29:01,060 lib/bx/bbi/bigbed_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:01,066 lib/bx/bbi/bigbed_file.c:11318:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,066 11318 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,066 | ^ 2021-07-15T03:29:01,067 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,067 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,067 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,067 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,067 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,067 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,074 lib/bx/bbi/bigbed_file.c:11318:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,074 11318 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,074 | ^ 2021-07-15T03:29:01,074 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,074 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,075 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,075 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:01,075 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:01,075 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,081 lib/bx/bbi/bigbed_file.c:11318:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,081 11318 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,081 | ^ 2021-07-15T03:29:01,082 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,082 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,082 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,082 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,082 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,082 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,088 lib/bx/bbi/bigbed_file.c:11318:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,088 11318 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,089 | ^ 2021-07-15T03:29:01,089 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,089 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,089 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,089 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,089 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,089 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,095 lib/bx/bbi/bigbed_file.c:11318:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,096 11318 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,096 | ^ 2021-07-15T03:29:01,096 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,096 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,096 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,096 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:01,096 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:01,096 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,103 lib/bx/bbi/bigbed_file.c:11318:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,103 11318 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,103 | ^ 2021-07-15T03:29:01,103 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,103 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,103 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,103 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,103 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,104 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,111 lib/bx/bbi/bigbed_file.c:11334:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,111 11334 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,112 | ^ 2021-07-15T03:29:01,112 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,112 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,112 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,112 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,112 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,112 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,118 lib/bx/bbi/bigbed_file.c:11334:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,119 11334 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,119 | ^ 2021-07-15T03:29:01,119 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,119 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,119 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,119 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:01,119 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:01,119 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,126 lib/bx/bbi/bigbed_file.c:11334:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,126 11334 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,126 | ^ 2021-07-15T03:29:01,126 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,126 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,126 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,126 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,126 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,127 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,133 lib/bx/bbi/bigbed_file.c:11334:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,133 11334 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,133 | ^ 2021-07-15T03:29:01,133 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,133 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,133 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,134 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,134 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,134 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,140 lib/bx/bbi/bigbed_file.c:11334:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,140 11334 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,140 | ^ 2021-07-15T03:29:01,140 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,140 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,141 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,141 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:01,141 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:01,141 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:01,148 lib/bx/bbi/bigbed_file.c:11334:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:01,148 11334 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:01,148 | ^ 2021-07-15T03:29:01,148 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:01,149 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:01,149 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T03:29:01,149 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:01,149 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:01,149 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:10,882 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bigbed_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bigbed_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:11,032 building 'bx.align._epo' extension 2021-07-15T03:29:11,037 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/align/_epo.c -o build/temp.linux-armv7l-3.9/lib/bx/align/_epo.o 2021-07-15T03:29:11,394 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T03:29:11,394 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T03:29:11,394 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T03:29:11,394 from lib/bx/align/_epo.c:598: 2021-07-15T03:29:11,394 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T03:29:11,395 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T03:29:11,395 | ^~~~~~~ 2021-07-15T03:29:11,536 lib/bx/align/_epo.c: In function ‘__pyx_f_2bx_5align_4_epo_bed_union’: 2021-07-15T03:29:11,539 lib/bx/align/_epo.c:5390:237: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2021-07-15T03:29:11,539 5390 | __pyx_t_4 = (((*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_uint64_t *, __pyx_pybuffernd_elements.rcbuffer->pybuffer.buf, __pyx_t_18, __pyx_pybuffernd_elements.diminfo[0].strides, __pyx_t_19, __pyx_pybuffernd_elements.diminfo[1].strides)) <= __pyx_v_cen) != 0); 2021-07-15T03:29:11,539 | ^~ 2021-07-15T03:29:11,674 lib/bx/align/_epo.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:11,679 lib/bx/align/_epo.c:9722:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,680 9722 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,680 | ^ 2021-07-15T03:29:11,680 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,680 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,680 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,680 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,680 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,681 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,686 lib/bx/align/_epo.c:9722:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,686 9722 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,686 | ^ 2021-07-15T03:29:11,686 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,686 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,687 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,687 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:11,687 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:11,687 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,692 lib/bx/align/_epo.c:9722:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,692 9722 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,692 | ^ 2021-07-15T03:29:11,692 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,692 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,693 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,693 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,693 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,693 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,698 lib/bx/align/_epo.c:9722:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,698 9722 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,698 | ^ 2021-07-15T03:29:11,698 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,698 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,698 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,699 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,699 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,699 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,704 lib/bx/align/_epo.c:9722:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,704 9722 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,704 | ^ 2021-07-15T03:29:11,704 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,704 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,704 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,705 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:11,705 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:11,705 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,710 lib/bx/align/_epo.c:9722:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,710 9722 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,710 | ^ 2021-07-15T03:29:11,710 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,710 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,711 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,711 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,711 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,711 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,717 lib/bx/align/_epo.c:9738:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,717 9738 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,718 | ^ 2021-07-15T03:29:11,718 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,718 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,718 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,718 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,718 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,718 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,723 lib/bx/align/_epo.c:9738:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,723 9738 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,723 | ^ 2021-07-15T03:29:11,723 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,724 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,724 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,724 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:11,724 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:11,724 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,729 lib/bx/align/_epo.c:9738:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,729 9738 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,729 | ^ 2021-07-15T03:29:11,729 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,730 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,730 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,730 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,730 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,730 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,735 lib/bx/align/_epo.c:9738:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,735 9738 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,735 | ^ 2021-07-15T03:29:11,736 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,736 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,736 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,736 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,736 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,736 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,741 lib/bx/align/_epo.c:9738:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,741 9738 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,742 | ^ 2021-07-15T03:29:11,742 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,742 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,742 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,742 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:11,742 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:11,742 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:11,747 lib/bx/align/_epo.c:9738:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:11,747 9738 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:11,748 | ^ 2021-07-15T03:29:11,748 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:11,748 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:11,748 from lib/bx/align/_epo.c:4: 2021-07-15T03:29:11,748 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:11,748 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:11,748 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:24,498 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/align/_epo.o -o build/lib.linux-armv7l-3.9/bx/align/_epo.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:24,650 building 'bx.arrays.bed' extension 2021-07-15T03:29:24,654 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/arrays/bed.c -o build/temp.linux-armv7l-3.9/lib/bx/arrays/bed.o 2021-07-15T03:29:25,046 lib/bx/arrays/bed.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:25,048 lib/bx/arrays/bed.c:3336:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,048 3336 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,048 | ^ 2021-07-15T03:29:25,048 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,048 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,049 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,049 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,049 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,049 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,051 lib/bx/arrays/bed.c:3336:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,051 3336 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,051 | ^ 2021-07-15T03:29:25,051 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,051 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,051 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,051 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:25,052 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:25,052 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,053 lib/bx/arrays/bed.c:3336:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,053 3336 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,053 | ^ 2021-07-15T03:29:25,054 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,054 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,054 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,054 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,054 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,054 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,055 lib/bx/arrays/bed.c:3336:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,056 3336 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,056 | ^ 2021-07-15T03:29:25,056 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,056 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,056 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,056 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,056 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,056 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,058 lib/bx/arrays/bed.c:3336:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,058 3336 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,058 | ^ 2021-07-15T03:29:25,058 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,058 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,058 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,059 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:25,059 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:25,059 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,060 lib/bx/arrays/bed.c:3336:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,060 3336 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,061 | ^ 2021-07-15T03:29:25,061 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,061 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,061 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,061 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,061 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,061 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,064 lib/bx/arrays/bed.c:3352:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,064 3352 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,064 | ^ 2021-07-15T03:29:25,064 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,064 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,064 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,064 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,064 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,064 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,066 lib/bx/arrays/bed.c:3352:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,066 3352 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,066 | ^ 2021-07-15T03:29:25,066 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,066 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,066 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,067 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:25,067 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:25,067 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,068 lib/bx/arrays/bed.c:3352:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,068 3352 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,069 | ^ 2021-07-15T03:29:25,069 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,069 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,069 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,069 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,069 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,069 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,071 lib/bx/arrays/bed.c:3352:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,071 3352 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,071 | ^ 2021-07-15T03:29:25,071 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,071 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,071 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,071 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,072 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,072 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,073 lib/bx/arrays/bed.c:3352:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,073 3352 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,073 | ^ 2021-07-15T03:29:25,074 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,074 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,074 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,074 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:25,074 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:25,074 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:25,076 lib/bx/arrays/bed.c:3352:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:25,076 3352 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:25,076 | ^ 2021-07-15T03:29:25,076 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:25,076 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:25,076 from lib/bx/arrays/bed.c:4: 2021-07-15T03:29:25,076 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:25,076 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:25,077 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,100 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/arrays/bed.o -o build/lib.linux-armv7l-3.9/bx/arrays/bed.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:28,215 building 'bx.arrays.wiggle' extension 2021-07-15T03:29:28,216 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/arrays/wiggle.c -o build/temp.linux-armv7l-3.9/lib/bx/arrays/wiggle.o 2021-07-15T03:29:28,640 lib/bx/arrays/wiggle.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:28,642 lib/bx/arrays/wiggle.c:4908:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,643 4908 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,643 | ^ 2021-07-15T03:29:28,644 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,644 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,644 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,644 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,644 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,644 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,647 lib/bx/arrays/wiggle.c:4908:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,648 4908 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,648 | ^ 2021-07-15T03:29:28,648 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,648 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,648 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,648 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:28,648 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:28,649 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,651 lib/bx/arrays/wiggle.c:4908:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,652 4908 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,652 | ^ 2021-07-15T03:29:28,652 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,652 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,652 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,652 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,652 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,653 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,656 lib/bx/arrays/wiggle.c:4908:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,656 4908 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,656 | ^ 2021-07-15T03:29:28,656 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,656 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,656 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,656 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,657 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,657 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,660 lib/bx/arrays/wiggle.c:4908:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,660 4908 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,660 | ^ 2021-07-15T03:29:28,660 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,660 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,661 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,661 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:28,661 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:28,661 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,664 lib/bx/arrays/wiggle.c:4908:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,664 4908 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,664 | ^ 2021-07-15T03:29:28,664 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,664 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,665 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,665 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,665 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,665 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,669 lib/bx/arrays/wiggle.c:4924:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,669 4924 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,669 | ^ 2021-07-15T03:29:28,669 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,670 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,670 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,670 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,670 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,670 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,673 lib/bx/arrays/wiggle.c:4924:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,673 4924 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,673 | ^ 2021-07-15T03:29:28,673 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,674 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,674 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,674 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:28,674 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:28,674 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,677 lib/bx/arrays/wiggle.c:4924:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,677 4924 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,677 | ^ 2021-07-15T03:29:28,678 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,678 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,678 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,678 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,678 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,678 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,681 lib/bx/arrays/wiggle.c:4924:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,681 4924 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,682 | ^ 2021-07-15T03:29:28,682 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,682 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,682 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,682 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,682 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,682 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,685 lib/bx/arrays/wiggle.c:4924:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,685 4924 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,686 | ^ 2021-07-15T03:29:28,686 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,686 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,686 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,686 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:28,686 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:28,686 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:28,689 lib/bx/arrays/wiggle.c:4924:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:28,689 4924 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:28,690 | ^ 2021-07-15T03:29:28,690 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:28,690 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:28,690 from lib/bx/arrays/wiggle.c:4: 2021-07-15T03:29:28,690 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:28,690 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:28,690 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,452 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/arrays/wiggle.o -o build/lib.linux-armv7l-3.9/bx/arrays/wiggle.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:34,569 building 'bx.align.sitemask._cpg' extension 2021-07-15T03:29:34,569 creating build/temp.linux-armv7l-3.9/lib/bx/align/sitemask 2021-07-15T03:29:34,574 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/align/sitemask/_cpg.c -o build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/_cpg.o 2021-07-15T03:29:34,969 lib/bx/align/sitemask/_cpg.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:34,971 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,971 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,971 | ^ 2021-07-15T03:29:34,972 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,972 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,973 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,973 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:34,973 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:34,973 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,975 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,975 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,975 | ^ 2021-07-15T03:29:34,976 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,976 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,976 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,976 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:34,976 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:34,976 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,979 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,979 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,979 | ^ 2021-07-15T03:29:34,979 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,979 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,979 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,979 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:34,980 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:34,980 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,982 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,982 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,982 | ^ 2021-07-15T03:29:34,982 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,983 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,983 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,983 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:34,983 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:34,983 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,985 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,985 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,985 | ^ 2021-07-15T03:29:34,986 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,986 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,986 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,986 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:34,986 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:34,986 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,988 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,989 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,989 | ^ 2021-07-15T03:29:34,989 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,989 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,989 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,989 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:34,989 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:34,990 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,993 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,993 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,993 | ^ 2021-07-15T03:29:34,993 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,993 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,993 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,993 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:34,994 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:34,994 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,996 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,996 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,996 | ^ 2021-07-15T03:29:34,996 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:34,997 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:34,997 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:34,997 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:34,997 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:34,997 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:34,999 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:34,999 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:34,999 | ^ 2021-07-15T03:29:35,000 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:35,000 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:35,000 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:35,000 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:35,000 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:35,000 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:35,002 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:35,003 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:35,003 | ^ 2021-07-15T03:29:35,003 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:35,003 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:35,003 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:35,003 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:35,004 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:35,004 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:35,006 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:35,006 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:35,006 | ^ 2021-07-15T03:29:35,006 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:35,006 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:35,007 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:35,007 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:35,007 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:35,007 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:35,009 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:35,009 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:35,009 | ^ 2021-07-15T03:29:35,009 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:35,010 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:35,010 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T03:29:35,010 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:35,010 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:35,010 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:38,373 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/align/sitemask/find_cpg.c -o build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/find_cpg.o 2021-07-15T03:29:38,561 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/_cpg.o build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/find_cpg.o -o build/lib.linux-armv7l-3.9/bx/align/sitemask/_cpg.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:38,684 building 'bx.intseq.ngramcount' extension 2021-07-15T03:29:38,685 creating build/temp.linux-armv7l-3.9/lib/bx/intseq 2021-07-15T03:29:38,686 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c lib/bx/intseq/ngramcount.c -o build/temp.linux-armv7l-3.9/lib/bx/intseq/ngramcount.o 2021-07-15T03:29:39,067 lib/bx/intseq/ngramcount.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:39,069 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,069 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,069 | ^ 2021-07-15T03:29:39,070 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,071 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,071 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,071 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,071 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,071 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,073 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,073 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,073 | ^ 2021-07-15T03:29:39,073 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,074 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,074 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,074 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:39,074 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:39,074 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,076 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,076 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,076 | ^ 2021-07-15T03:29:39,076 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,077 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,077 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,077 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,077 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,077 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,079 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,079 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,079 | ^ 2021-07-15T03:29:39,079 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,079 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,079 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,079 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,080 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,080 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,080 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,081 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,081 | ^ 2021-07-15T03:29:39,081 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,081 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,081 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,081 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:39,081 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:39,081 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,082 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,082 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,083 | ^ 2021-07-15T03:29:39,083 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,083 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,083 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,083 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,083 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,083 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,085 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,085 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,085 | ^ 2021-07-15T03:29:39,085 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,085 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,085 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,085 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,086 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,086 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,086 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,087 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,087 | ^ 2021-07-15T03:29:39,087 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,087 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,087 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,087 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:39,087 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:39,087 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,088 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,088 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,089 | ^ 2021-07-15T03:29:39,089 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,089 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,089 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,089 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,089 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,089 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,090 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,090 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,090 | ^ 2021-07-15T03:29:39,090 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,091 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,091 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,091 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,091 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,091 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,092 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,092 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,092 | ^ 2021-07-15T03:29:39,092 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,092 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,092 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,092 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:39,093 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:39,093 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:39,093 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:39,094 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:39,094 | ^ 2021-07-15T03:29:39,094 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:39,094 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:39,094 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T03:29:39,094 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:39,094 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:39,094 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,349 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/intseq/ngramcount.o -o build/lib.linux-armv7l-3.9/bx/intseq/ngramcount.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:41,458 building 'bx.misc._seekbzip2' extension 2021-07-15T03:29:41,459 creating build/temp.linux-armv7l-3.9/src/bunzip 2021-07-15T03:29:41,459 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/bunzip -I/usr/include/python3.9 -c lib/bx/misc/_seekbzip2.c -o build/temp.linux-armv7l-3.9/lib/bx/misc/_seekbzip2.o 2021-07-15T03:29:41,847 lib/bx/misc/_seekbzip2.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T03:29:41,848 lib/bx/misc/_seekbzip2.c:3305:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,848 3305 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,848 | ^ 2021-07-15T03:29:41,849 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,849 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,849 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,850 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,850 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,850 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,852 lib/bx/misc/_seekbzip2.c:3305:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,852 3305 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,852 | ^ 2021-07-15T03:29:41,852 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,852 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,852 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,853 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:41,853 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:41,853 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,855 lib/bx/misc/_seekbzip2.c:3305:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,855 3305 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,855 | ^ 2021-07-15T03:29:41,855 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,855 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,855 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,856 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,856 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,856 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,858 lib/bx/misc/_seekbzip2.c:3305:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,858 3305 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,858 | ^ 2021-07-15T03:29:41,858 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,859 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,859 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,859 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,859 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,859 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,861 lib/bx/misc/_seekbzip2.c:3305:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,861 3305 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,861 | ^ 2021-07-15T03:29:41,861 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,861 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,862 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,862 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:41,862 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:41,862 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,864 lib/bx/misc/_seekbzip2.c:3305:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,864 3305 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,864 | ^ 2021-07-15T03:29:41,864 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,864 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,865 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,865 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,865 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,865 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,868 lib/bx/misc/_seekbzip2.c:3321:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,868 3321 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,868 | ^ 2021-07-15T03:29:41,868 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,868 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,868 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,869 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,869 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,869 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,871 lib/bx/misc/_seekbzip2.c:3321:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,871 3321 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,871 | ^ 2021-07-15T03:29:41,871 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,871 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,871 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,871 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:41,872 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:41,872 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,874 lib/bx/misc/_seekbzip2.c:3321:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,874 3321 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,874 | ^ 2021-07-15T03:29:41,874 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,874 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,874 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,874 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,875 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,875 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,877 lib/bx/misc/_seekbzip2.c:3321:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,877 3321 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,877 | ^ 2021-07-15T03:29:41,877 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,877 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,877 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,878 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,878 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,878 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,880 lib/bx/misc/_seekbzip2.c:3321:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,880 3321 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,880 | ^ 2021-07-15T03:29:41,880 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,880 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,880 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,880 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T03:29:41,881 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T03:29:41,881 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:41,883 lib/bx/misc/_seekbzip2.c:3321:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T03:29:41,883 3321 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T03:29:41,883 | ^ 2021-07-15T03:29:41,883 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T03:29:41,883 from /usr/include/python3.9/Python.h:97, 2021-07-15T03:29:41,883 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T03:29:41,883 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T03:29:41,884 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T03:29:41,884 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T03:29:44,161 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/bunzip -I/usr/include/python3.9 -c src/bunzip/micro-bunzip.c -o build/temp.linux-armv7l-3.9/src/bunzip/micro-bunzip.o 2021-07-15T03:29:44,286 src/bunzip/micro-bunzip.c: In function ‘get_next_block’: 2021-07-15T03:29:44,286 src/bunzip/micro-bunzip.c:151:31: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T03:29:44,286 151 | if((origPtr=get_bits(bd,24)) > dbufSize) return RETVAL_DATA_ERROR; 2021-07-15T03:29:44,287 | ^ 2021-07-15T03:29:44,289 src/bunzip/micro-bunzip.c:298:27: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T03:29:44,289 298 | while (bd->inbufBitCountmaxLen) { 2021-07-15T03:29:44,289 | ^ 2021-07-15T03:29:44,290 src/bunzip/micro-bunzip.c:400:13: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T03:29:44,291 400 | if(origPtr>=dbufCount) return RETVAL_DATA_ERROR; 2021-07-15T03:29:44,291 | ^~ 2021-07-15T03:29:44,293 src/bunzip/micro-bunzip.c: In function ‘start_bunzip’: 2021-07-15T03:29:44,294 src/bunzip/micro-bunzip.c:629:12: warning: pointer targets in assignment from ‘char *’ to ‘unsigned char *’ differ in signedness [-Wpointer-sign] 2021-07-15T03:29:44,294 629 | bd->inbuf=inbuf; 2021-07-15T03:29:44,294 | ^ 2021-07-15T03:29:44,517 src/bunzip/micro-bunzip.c: In function ‘get_next_block’: 2021-07-15T03:29:44,517 src/bunzip/micro-bunzip.c:129:51: warning: ‘limit’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T03:29:44,517 129 | int dbufCount,nextSym,dbufSize,groupCount,*base,*limit,selector, 2021-07-15T03:29:44,517 | ^~~~~ 2021-07-15T03:29:44,518 src/bunzip/micro-bunzip.c:129:45: warning: ‘base’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T03:29:44,518 129 | int dbufCount,nextSym,dbufSize,groupCount,*base,*limit,selector, 2021-07-15T03:29:44,518 | ^~~~ 2021-07-15T03:29:44,518 src/bunzip/micro-bunzip.c:128:21: warning: ‘hufGroup’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T03:29:44,518 128 | struct group_data *hufGroup; 2021-07-15T03:29:44,518 | ^~~~~~~~ 2021-07-15T03:29:44,894 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/misc/_seekbzip2.o build/temp.linux-armv7l-3.9/src/bunzip/micro-bunzip.o -o build/lib.linux-armv7l-3.9/bx/misc/_seekbzip2.cpython-39-arm-linux-gnueabihf.so 2021-07-15T03:29:45,004 running build_scripts 2021-07-15T03:29:45,005 creating build/scripts-3.9 2021-07-15T03:29:45,007 copying and adjusting scripts/maf_to_fasta.py -> build/scripts-3.9 2021-07-15T03:29:45,009 copying and adjusting scripts/maf_to_axt.py -> build/scripts-3.9 2021-07-15T03:29:45,011 copying and adjusting scripts/nib_length.py -> build/scripts-3.9 2021-07-15T03:29:45,012 copying and adjusting scripts/maf_shuffle_columns.py -> build/scripts-3.9 2021-07-15T03:29:45,014 copying and adjusting scripts/maf_drop_overlapping.py -> build/scripts-3.9 2021-07-15T03:29:45,015 copying and adjusting scripts/maf_div_sites.py -> build/scripts-3.9 2021-07-15T03:29:45,017 copying and adjusting scripts/bed_complement.py -> build/scripts-3.9 2021-07-15T03:29:45,019 copying and adjusting scripts/bed_coverage_by_interval.py -> build/scripts-3.9 2021-07-15T03:29:45,020 copying and adjusting scripts/bed_build_windows.py -> build/scripts-3.9 2021-07-15T03:29:45,022 copying and adjusting scripts/maf_percent_identity.py -> build/scripts-3.9 2021-07-15T03:29:45,023 copying and adjusting scripts/table_add_column.py -> build/scripts-3.9 2021-07-15T03:29:45,025 copying and adjusting scripts/maf_extract_ranges.py -> build/scripts-3.9 2021-07-15T03:29:45,027 copying and adjusting scripts/maf_tile_2.py -> build/scripts-3.9 2021-07-15T03:29:45,029 copying and adjusting scripts/line_select.py -> build/scripts-3.9 2021-07-15T03:29:45,031 copying and adjusting scripts/align_print_template.py -> build/scripts-3.9 2021-07-15T03:29:45,033 copying and adjusting scripts/bed_intersect.py -> build/scripts-3.9 2021-07-15T03:29:45,034 copying and adjusting scripts/maf_translate_chars.py -> build/scripts-3.9 2021-07-15T03:29:45,036 copying and adjusting scripts/axt_to_maf.py -> build/scripts-3.9 2021-07-15T03:29:45,038 copying and adjusting scripts/pretty_table.py -> build/scripts-3.9 2021-07-15T03:29:45,039 copying and adjusting scripts/bed_count_overlapping.py -> build/scripts-3.9 2021-07-15T03:29:45,041 copying and adjusting scripts/nib_chrom_intervals_to_fasta.py -> build/scripts-3.9 2021-07-15T03:29:45,042 copying and adjusting scripts/maf_word_frequency.py -> build/scripts-3.9 2021-07-15T03:29:45,044 copying and adjusting scripts/bnMapper.py -> build/scripts-3.9 2021-07-15T03:29:45,046 copying and adjusting scripts/interval_join.py -> build/scripts-3.9 2021-07-15T03:29:45,048 copying and adjusting scripts/interval_count_intersections.py -> build/scripts-3.9 2021-07-15T03:29:45,049 copying and adjusting scripts/maf_randomize.py -> build/scripts-3.9 2021-07-15T03:29:45,051 copying and adjusting scripts/mMK_bitset.py -> build/scripts-3.9 2021-07-15T03:29:45,053 copying and adjusting scripts/lzop_build_offset_table.py -> build/scripts-3.9 2021-07-15T03:29:45,055 copying and adjusting scripts/maf_col_counts_all.py -> build/scripts-3.9 2021-07-15T03:29:45,056 copying and adjusting scripts/int_seqs_to_char_strings.py -> build/scripts-3.9 2021-07-15T03:29:45,058 copying and adjusting scripts/out_to_chain.py -> build/scripts-3.9 2021-07-15T03:29:45,060 copying and adjusting scripts/nib_intervals_to_fasta.py -> build/scripts-3.9 2021-07-15T03:29:45,061 copying and adjusting scripts/wiggle_to_chr_binned_array.py -> build/scripts-3.9 2021-07-15T03:29:45,063 copying and adjusting scripts/maf_to_concat_fasta.py -> build/scripts-3.9 2021-07-15T03:29:45,065 copying and adjusting scripts/table_filter.py -> build/scripts-3.9 2021-07-15T03:29:45,066 copying and adjusting scripts/maf_filter.py -> build/scripts-3.9 2021-07-15T03:29:45,068 copying and adjusting scripts/maf_tile_2bit.py -> build/scripts-3.9 2021-07-15T03:29:45,070 copying and adjusting scripts/maf_count.py -> build/scripts-3.9 2021-07-15T03:29:45,072 copying and adjusting scripts/maf_split_by_src.py -> build/scripts-3.9 2021-07-15T03:29:45,074 copying and adjusting scripts/maf_col_counts.py -> build/scripts-3.9 2021-07-15T03:29:45,075 copying and adjusting scripts/bed_count_by_interval.py -> build/scripts-3.9 2021-07-15T03:29:45,077 copying and adjusting scripts/lav_to_maf.py -> build/scripts-3.9 2021-07-15T03:29:45,079 copying and adjusting scripts/maf_thread_for_species.py -> build/scripts-3.9 2021-07-15T03:29:45,080 copying and adjusting scripts/axt_extract_ranges.py -> build/scripts-3.9 2021-07-15T03:29:45,082 copying and adjusting scripts/mask_quality.py -> build/scripts-3.9 2021-07-15T03:29:45,083 copying and adjusting scripts/maf_mapping_word_frequency.py -> build/scripts-3.9 2021-07-15T03:29:45,085 copying and adjusting scripts/axt_to_lav.py -> build/scripts-3.9 2021-07-15T03:29:45,087 copying and adjusting scripts/axt_to_fasta.py -> build/scripts-3.9 2021-07-15T03:29:45,088 copying and adjusting scripts/wiggle_to_binned_array.py -> build/scripts-3.9 2021-07-15T03:29:45,090 copying and adjusting scripts/bed_bigwig_profile.py -> build/scripts-3.9 2021-07-15T03:29:45,091 copying and adjusting scripts/bed_intersect_basewise.py -> build/scripts-3.9 2021-07-15T03:29:45,093 copying and adjusting scripts/wiggle_to_simple.py -> build/scripts-3.9 2021-07-15T03:29:45,094 copying and adjusting scripts/maf_gc_content.py -> build/scripts-3.9 2021-07-15T03:29:45,096 copying and adjusting scripts/tfloc_summary.py -> build/scripts-3.9 2021-07-15T03:29:45,098 copying and adjusting scripts/maf_limit_to_species.py -> build/scripts-3.9 2021-07-15T03:29:45,099 copying and adjusting scripts/maf_percent_columns_matching.py -> build/scripts-3.9 2021-07-15T03:29:45,101 copying and adjusting scripts/maf_interval_alignibility.py -> build/scripts-3.9 2021-07-15T03:29:45,103 copying and adjusting scripts/maf_extract_chrom_ranges.py -> build/scripts-3.9 2021-07-15T03:29:45,104 copying and adjusting scripts/bed_diff_basewise_summary.py -> build/scripts-3.9 2021-07-15T03:29:45,106 copying and adjusting scripts/bed_subtract_basewise.py -> build/scripts-3.9 2021-07-15T03:29:45,107 copying and adjusting scripts/maf_build_index.py -> build/scripts-3.9 2021-07-15T03:29:45,109 copying and adjusting scripts/maf_print_scores.py -> build/scripts-3.9 2021-07-15T03:29:45,111 copying and adjusting scripts/maf_mask_cpg.py -> build/scripts-3.9 2021-07-15T03:29:45,112 copying and adjusting scripts/random_lines.py -> build/scripts-3.9 2021-07-15T03:29:45,114 copying and adjusting scripts/maf_gap_frequency.py -> build/scripts-3.9 2021-07-15T03:29:45,115 copying and adjusting scripts/maf_select.py -> build/scripts-3.9 2021-07-15T03:29:45,117 copying and adjusting scripts/gene_fourfold_sites.py -> build/scripts-3.9 2021-07-15T03:29:45,119 copying and adjusting scripts/div_snp_table_chr.py -> build/scripts-3.9 2021-07-15T03:29:45,121 copying and adjusting scripts/maf_mean_length_ungapped_piece.py -> build/scripts-3.9 2021-07-15T03:29:45,123 copying and adjusting scripts/maf_filter_max_wc.py -> build/scripts-3.9 2021-07-15T03:29:45,124 copying and adjusting scripts/get_scores_in_intervals.py -> build/scripts-3.9 2021-07-15T03:29:45,126 copying and adjusting scripts/prefix_lines.py -> build/scripts-3.9 2021-07-15T03:29:45,127 copying and adjusting scripts/bed_merge_overlapping.py -> build/scripts-3.9 2021-07-15T03:29:45,129 copying and adjusting scripts/maf_extract_ranges_indexed.py -> build/scripts-3.9 2021-07-15T03:29:45,131 copying and adjusting scripts/bed_extend_to.py -> build/scripts-3.9 2021-07-15T03:29:45,132 copying and adjusting scripts/wiggle_to_array_tree.py -> build/scripts-3.9 2021-07-15T03:29:45,134 copying and adjusting scripts/lav_to_axt.py -> build/scripts-3.9 2021-07-15T03:29:45,135 copying and adjusting scripts/bed_rand_intersect.py -> build/scripts-3.9 2021-07-15T03:29:45,138 copying and adjusting scripts/one_field_per_line.py -> build/scripts-3.9 2021-07-15T03:29:45,139 copying and adjusting scripts/maf_covered_regions.py -> build/scripts-3.9 2021-07-15T03:29:45,141 copying and adjusting scripts/qv_to_bqv.py -> build/scripts-3.9 2021-07-15T03:29:45,142 copying and adjusting scripts/maf_chunk.py -> build/scripts-3.9 2021-07-15T03:29:45,144 copying and adjusting scripts/maf_to_int_seqs.py -> build/scripts-3.9 2021-07-15T03:29:45,146 copying and adjusting scripts/aggregate_scores_in_intervals.py -> build/scripts-3.9 2021-07-15T03:29:45,148 copying and adjusting scripts/bed_coverage.py -> build/scripts-3.9 2021-07-15T03:29:45,149 copying and adjusting scripts/maf_species_in_all_files.py -> build/scripts-3.9 2021-07-15T03:29:45,151 copying and adjusting scripts/maf_print_chroms.py -> build/scripts-3.9 2021-07-15T03:29:45,152 copying and adjusting scripts/maf_chop.py -> build/scripts-3.9 2021-07-15T03:29:45,154 copying and adjusting scripts/maf_covered_ranges.py -> build/scripts-3.9 2021-07-15T03:29:45,156 copying and adjusting scripts/maf_region_coverage_by_src.py -> build/scripts-3.9 2021-07-15T03:29:45,158 copying and adjusting scripts/find_in_sorted_file.py -> build/scripts-3.9 2021-07-15T03:29:45,159 copying and adjusting scripts/maf_truncate.py -> build/scripts-3.9 2021-07-15T03:29:45,161 copying and adjusting scripts/maf_tile.py -> build/scripts-3.9 2021-07-15T03:29:45,163 copying and adjusting scripts/ucsc_gene_table_to_intervals.py -> build/scripts-3.9 2021-07-15T03:29:45,164 changing mode of build/scripts-3.9/maf_to_fasta.py from 644 to 755 2021-07-15T03:29:45,165 changing mode of build/scripts-3.9/maf_to_axt.py from 644 to 755 2021-07-15T03:29:45,165 changing mode of build/scripts-3.9/nib_length.py from 644 to 755 2021-07-15T03:29:45,166 changing mode of build/scripts-3.9/maf_shuffle_columns.py from 644 to 755 2021-07-15T03:29:45,166 changing mode of build/scripts-3.9/maf_drop_overlapping.py from 644 to 755 2021-07-15T03:29:45,166 changing mode of build/scripts-3.9/maf_div_sites.py from 644 to 755 2021-07-15T03:29:45,167 changing mode of build/scripts-3.9/bed_complement.py from 644 to 755 2021-07-15T03:29:45,167 changing mode of build/scripts-3.9/bed_coverage_by_interval.py from 644 to 755 2021-07-15T03:29:45,168 changing mode of build/scripts-3.9/bed_build_windows.py from 644 to 755 2021-07-15T03:29:45,168 changing mode of build/scripts-3.9/maf_percent_identity.py from 644 to 755 2021-07-15T03:29:45,169 changing mode of build/scripts-3.9/table_add_column.py from 644 to 755 2021-07-15T03:29:45,169 changing mode of build/scripts-3.9/maf_extract_ranges.py from 644 to 755 2021-07-15T03:29:45,170 changing mode of build/scripts-3.9/maf_tile_2.py from 644 to 755 2021-07-15T03:29:45,170 changing mode of build/scripts-3.9/line_select.py from 644 to 755 2021-07-15T03:29:45,171 changing mode of build/scripts-3.9/align_print_template.py from 644 to 755 2021-07-15T03:29:45,171 changing mode of build/scripts-3.9/bed_intersect.py from 644 to 755 2021-07-15T03:29:45,172 changing mode of build/scripts-3.9/maf_translate_chars.py from 644 to 755 2021-07-15T03:29:45,172 changing mode of build/scripts-3.9/axt_to_maf.py from 644 to 755 2021-07-15T03:29:45,172 changing mode of build/scripts-3.9/pretty_table.py from 644 to 755 2021-07-15T03:29:45,173 changing mode of build/scripts-3.9/bed_count_overlapping.py from 644 to 755 2021-07-15T03:29:45,173 changing mode of build/scripts-3.9/nib_chrom_intervals_to_fasta.py from 644 to 755 2021-07-15T03:29:45,174 changing mode of build/scripts-3.9/maf_word_frequency.py from 644 to 755 2021-07-15T03:29:45,174 changing mode of build/scripts-3.9/bnMapper.py from 644 to 755 2021-07-15T03:29:45,175 changing mode of build/scripts-3.9/interval_join.py from 644 to 755 2021-07-15T03:29:45,175 changing mode of build/scripts-3.9/interval_count_intersections.py from 644 to 755 2021-07-15T03:29:45,175 changing mode of build/scripts-3.9/maf_randomize.py from 644 to 755 2021-07-15T03:29:45,176 changing mode of build/scripts-3.9/mMK_bitset.py from 644 to 755 2021-07-15T03:29:45,176 changing mode of build/scripts-3.9/lzop_build_offset_table.py from 644 to 755 2021-07-15T03:29:45,177 changing mode of build/scripts-3.9/maf_col_counts_all.py from 644 to 755 2021-07-15T03:29:45,178 changing mode of build/scripts-3.9/int_seqs_to_char_strings.py from 644 to 755 2021-07-15T03:29:45,178 changing mode of build/scripts-3.9/out_to_chain.py from 644 to 755 2021-07-15T03:29:45,178 changing mode of build/scripts-3.9/nib_intervals_to_fasta.py from 644 to 755 2021-07-15T03:29:45,179 changing mode of build/scripts-3.9/wiggle_to_chr_binned_array.py from 644 to 755 2021-07-15T03:29:45,179 changing mode of build/scripts-3.9/maf_to_concat_fasta.py from 644 to 755 2021-07-15T03:29:45,180 changing mode of build/scripts-3.9/table_filter.py from 644 to 755 2021-07-15T03:29:45,180 changing mode of build/scripts-3.9/maf_filter.py from 644 to 755 2021-07-15T03:29:45,181 changing mode of build/scripts-3.9/maf_tile_2bit.py from 644 to 755 2021-07-15T03:29:45,181 changing mode of build/scripts-3.9/maf_count.py from 644 to 755 2021-07-15T03:29:45,182 changing mode of build/scripts-3.9/maf_split_by_src.py from 644 to 755 2021-07-15T03:29:45,182 changing mode of build/scripts-3.9/maf_col_counts.py from 644 to 755 2021-07-15T03:29:45,182 changing mode of build/scripts-3.9/bed_count_by_interval.py from 644 to 755 2021-07-15T03:29:45,183 changing mode of build/scripts-3.9/lav_to_maf.py from 644 to 755 2021-07-15T03:29:45,183 changing mode of build/scripts-3.9/maf_thread_for_species.py from 644 to 755 2021-07-15T03:29:45,184 changing mode of build/scripts-3.9/axt_extract_ranges.py from 644 to 755 2021-07-15T03:29:45,184 changing mode of build/scripts-3.9/mask_quality.py from 644 to 755 2021-07-15T03:29:45,185 changing mode of build/scripts-3.9/maf_mapping_word_frequency.py from 644 to 755 2021-07-15T03:29:45,185 changing mode of build/scripts-3.9/axt_to_lav.py from 644 to 755 2021-07-15T03:29:45,186 changing mode of build/scripts-3.9/axt_to_fasta.py from 644 to 755 2021-07-15T03:29:45,186 changing mode of build/scripts-3.9/wiggle_to_binned_array.py from 644 to 755 2021-07-15T03:29:45,186 changing mode of build/scripts-3.9/bed_bigwig_profile.py from 644 to 755 2021-07-15T03:29:45,187 changing mode of build/scripts-3.9/bed_intersect_basewise.py from 644 to 755 2021-07-15T03:29:45,187 changing mode of build/scripts-3.9/wiggle_to_simple.py from 644 to 755 2021-07-15T03:29:45,188 changing mode of build/scripts-3.9/maf_gc_content.py from 644 to 755 2021-07-15T03:29:45,188 changing mode of build/scripts-3.9/tfloc_summary.py from 644 to 755 2021-07-15T03:29:45,189 changing mode of build/scripts-3.9/maf_limit_to_species.py from 644 to 755 2021-07-15T03:29:45,189 changing mode of build/scripts-3.9/maf_percent_columns_matching.py from 644 to 755 2021-07-15T03:29:45,190 changing mode of build/scripts-3.9/maf_interval_alignibility.py from 644 to 755 2021-07-15T03:29:45,190 changing mode of build/scripts-3.9/maf_extract_chrom_ranges.py from 644 to 755 2021-07-15T03:29:45,191 changing mode of build/scripts-3.9/bed_diff_basewise_summary.py from 644 to 755 2021-07-15T03:29:45,191 changing mode of build/scripts-3.9/bed_subtract_basewise.py from 644 to 755 2021-07-15T03:29:45,192 changing mode of build/scripts-3.9/maf_build_index.py from 644 to 755 2021-07-15T03:29:45,192 changing mode of build/scripts-3.9/maf_print_scores.py from 644 to 755 2021-07-15T03:29:45,193 changing mode of build/scripts-3.9/maf_mask_cpg.py from 644 to 755 2021-07-15T03:29:45,193 changing mode of build/scripts-3.9/random_lines.py from 644 to 755 2021-07-15T03:29:45,194 changing mode of build/scripts-3.9/maf_gap_frequency.py from 644 to 755 2021-07-15T03:29:45,194 changing mode of build/scripts-3.9/maf_select.py from 644 to 755 2021-07-15T03:29:45,195 changing mode of build/scripts-3.9/gene_fourfold_sites.py from 644 to 755 2021-07-15T03:29:45,195 changing mode of build/scripts-3.9/div_snp_table_chr.py from 644 to 755 2021-07-15T03:29:45,196 changing mode of build/scripts-3.9/maf_mean_length_ungapped_piece.py from 644 to 755 2021-07-15T03:29:45,196 changing mode of build/scripts-3.9/maf_filter_max_wc.py from 644 to 755 2021-07-15T03:29:45,197 changing mode of build/scripts-3.9/get_scores_in_intervals.py from 644 to 755 2021-07-15T03:29:45,197 changing mode of build/scripts-3.9/prefix_lines.py from 644 to 755 2021-07-15T03:29:45,198 changing mode of build/scripts-3.9/bed_merge_overlapping.py from 644 to 755 2021-07-15T03:29:45,198 changing mode of build/scripts-3.9/maf_extract_ranges_indexed.py from 644 to 755 2021-07-15T03:29:45,199 changing mode of build/scripts-3.9/bed_extend_to.py from 644 to 755 2021-07-15T03:29:45,199 changing mode of build/scripts-3.9/wiggle_to_array_tree.py from 644 to 755 2021-07-15T03:29:45,199 changing mode of build/scripts-3.9/lav_to_axt.py from 644 to 755 2021-07-15T03:29:45,200 changing mode of build/scripts-3.9/bed_rand_intersect.py from 644 to 755 2021-07-15T03:29:45,200 changing mode of build/scripts-3.9/one_field_per_line.py from 644 to 755 2021-07-15T03:29:45,201 changing mode of build/scripts-3.9/maf_covered_regions.py from 644 to 755 2021-07-15T03:29:45,201 changing mode of build/scripts-3.9/qv_to_bqv.py from 644 to 755 2021-07-15T03:29:45,202 changing mode of build/scripts-3.9/maf_chunk.py from 644 to 755 2021-07-15T03:29:45,202 changing mode of build/scripts-3.9/maf_to_int_seqs.py from 644 to 755 2021-07-15T03:29:45,203 changing mode of build/scripts-3.9/aggregate_scores_in_intervals.py from 644 to 755 2021-07-15T03:29:45,203 changing mode of build/scripts-3.9/bed_coverage.py from 644 to 755 2021-07-15T03:29:45,204 changing mode of build/scripts-3.9/maf_species_in_all_files.py from 644 to 755 2021-07-15T03:29:45,204 changing mode of build/scripts-3.9/maf_print_chroms.py from 644 to 755 2021-07-15T03:29:45,204 changing mode of build/scripts-3.9/maf_chop.py from 644 to 755 2021-07-15T03:29:45,205 changing mode of build/scripts-3.9/maf_covered_ranges.py from 644 to 755 2021-07-15T03:29:45,205 changing mode of build/scripts-3.9/maf_region_coverage_by_src.py from 644 to 755 2021-07-15T03:29:45,206 changing mode of build/scripts-3.9/find_in_sorted_file.py from 644 to 755 2021-07-15T03:29:45,206 changing mode of build/scripts-3.9/maf_truncate.py from 644 to 755 2021-07-15T03:29:45,207 changing mode of build/scripts-3.9/maf_tile.py from 644 to 755 2021-07-15T03:29:45,207 changing mode of build/scripts-3.9/ucsc_gene_table_to_intervals.py from 644 to 755 2021-07-15T03:29:45,216 installing to build/bdist.linux-armv7l/wheel 2021-07-15T03:29:45,217 running install 2021-07-15T03:29:45,218 running install_lib 2021-07-15T03:29:45,222 creating build/bdist.linux-armv7l 2021-07-15T03:29:45,223 creating build/bdist.linux-armv7l/wheel 2021-07-15T03:29:45,225 creating build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,226 copying build/lib.linux-armv7l-3.9/bx/seqmapping_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,228 copying build/lib.linux-armv7l-3.9/bx/seqmapping.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,230 copying build/lib.linux-armv7l-3.9/bx/bitset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,244 creating build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T03:29:45,245 copying build/lib.linux-armv7l-3.9/bx/phylo/newick.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T03:29:45,247 copying build/lib.linux-armv7l-3.9/bx/phylo/newick_tests.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T03:29:45,249 copying build/lib.linux-armv7l-3.9/bx/phylo/phast_tests.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T03:29:45,251 copying build/lib.linux-armv7l-3.9/bx/phylo/__init__.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T03:29:45,253 copying build/lib.linux-armv7l-3.9/bx/phylo/phast.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T03:29:45,255 copying build/lib.linux-armv7l-3.9/bx/filter.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,257 copying build/lib.linux-armv7l-3.9/bx/binned_array_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,260 creating build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,261 copying build/lib.linux-armv7l-3.9/bx/bbi/bpt_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,273 copying build/lib.linux-armv7l-3.9/bx/bbi/bigwig_tests.py -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,275 copying build/lib.linux-armv7l-3.9/bx/bbi/bbi_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,308 copying build/lib.linux-armv7l-3.9/bx/bbi/bigbed_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,325 copying build/lib.linux-armv7l-3.9/bx/bbi/__init__.py -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,327 copying build/lib.linux-armv7l-3.9/bx/bbi/bigwig_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,352 copying build/lib.linux-armv7l-3.9/bx/bbi/cirtree_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T03:29:45,366 creating build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,367 copying build/lib.linux-armv7l-3.9/bx/seq/_twobit.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,374 copying build/lib.linux-armv7l-3.9/bx/seq/fasta.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,376 copying build/lib.linux-armv7l-3.9/bx/seq/nib.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,378 copying build/lib.linux-armv7l-3.9/bx/seq/core.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,380 copying build/lib.linux-armv7l-3.9/bx/seq/twobit_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,382 copying build/lib.linux-armv7l-3.9/bx/seq/__init__.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,386 copying build/lib.linux-armv7l-3.9/bx/seq/fasta_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,388 copying build/lib.linux-armv7l-3.9/bx/seq/_nib.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,392 copying build/lib.linux-armv7l-3.9/bx/seq/nib_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,394 copying build/lib.linux-armv7l-3.9/bx/seq/twobit.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,397 copying build/lib.linux-armv7l-3.9/bx/seq/qdna.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,400 copying build/lib.linux-armv7l-3.9/bx/seq/seq.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,402 copying build/lib.linux-armv7l-3.9/bx/seq/qdna_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,404 copying build/lib.linux-armv7l-3.9/bx/seq/seq_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T03:29:45,406 copying build/lib.linux-armv7l-3.9/bx/wiggle_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,409 creating build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,410 copying build/lib.linux-armv7l-3.9/bx/intervals/intersection_tests.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,412 copying build/lib.linux-armv7l-3.9/bx/intervals/cluster_tests.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,415 creating build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,416 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/base_coverage.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,418 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/quicksect.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,420 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/intersect.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,423 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/join.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,425 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/concat.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,427 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/__init__.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,429 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/find_clusters.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,431 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/complement.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,433 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/subtract.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,435 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/coverage.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,437 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/merge.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T03:29:45,439 copying build/lib.linux-armv7l-3.9/bx/intervals/random_intervals.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,442 copying build/lib.linux-armv7l-3.9/bx/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,444 copying build/lib.linux-armv7l-3.9/bx/intervals/cluster.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,449 copying build/lib.linux-armv7l-3.9/bx/intervals/intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,466 copying build/lib.linux-armv7l-3.9/bx/intervals/io.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T03:29:45,469 creating build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T03:29:45,470 copying build/lib.linux-armv7l-3.9/bx/motif/_pwm.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T03:29:45,475 copying build/lib.linux-armv7l-3.9/bx/motif/pwm_tests.py -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T03:29:45,477 copying build/lib.linux-armv7l-3.9/bx/motif/pwm.py -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T03:29:45,480 creating build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T03:29:45,481 copying build/lib.linux-armv7l-3.9/bx/motif/io/transfac.py -> build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T03:29:45,484 copying build/lib.linux-armv7l-3.9/bx/motif/io/__init__.py -> build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T03:29:45,485 copying build/lib.linux-armv7l-3.9/bx/motif/io/transfac_tests.py -> build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T03:29:45,488 creating build/bdist.linux-armv7l/wheel/bx/motif/logo 2021-07-15T03:29:45,489 copying build/lib.linux-armv7l-3.9/bx/motif/logo/template.ps -> build/bdist.linux-armv7l/wheel/bx/motif/logo 2021-07-15T03:29:45,491 copying build/lib.linux-armv7l-3.9/bx/motif/logo/__init__.py -> build/bdist.linux-armv7l/wheel/bx/motif/logo 2021-07-15T03:29:45,493 copying build/lib.linux-armv7l-3.9/bx/motif/__init__.py -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T03:29:45,495 creating build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,496 creating build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T03:29:45,498 copying build/lib.linux-armv7l-3.9/bx/align/tools/thread.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T03:29:45,500 copying build/lib.linux-armv7l-3.9/bx/align/tools/chop.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T03:29:45,502 copying build/lib.linux-armv7l-3.9/bx/align/tools/tile.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T03:29:45,504 copying build/lib.linux-armv7l-3.9/bx/align/tools/__init__.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T03:29:45,506 copying build/lib.linux-armv7l-3.9/bx/align/tools/fuse.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T03:29:45,508 copying build/lib.linux-armv7l-3.9/bx/align/core.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,510 copying build/lib.linux-armv7l-3.9/bx/align/epo.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,513 creating build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,514 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/quality.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,517 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/core.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,519 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/_cpg.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,526 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/sitemask_tests.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,528 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/cpg.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,530 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/__init__.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T03:29:45,532 copying build/lib.linux-armv7l-3.9/bx/align/score_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,534 copying build/lib.linux-armv7l-3.9/bx/align/epo_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,536 copying build/lib.linux-armv7l-3.9/bx/align/score.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,539 copying build/lib.linux-armv7l-3.9/bx/align/lav_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,540 copying build/lib.linux-armv7l-3.9/bx/align/maf.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,543 copying build/lib.linux-armv7l-3.9/bx/align/maf_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,545 copying build/lib.linux-armv7l-3.9/bx/align/__init__.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,547 copying build/lib.linux-armv7l-3.9/bx/align/_core.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,551 copying build/lib.linux-armv7l-3.9/bx/align/lav.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,554 copying build/lib.linux-armv7l-3.9/bx/align/axt.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,556 copying build/lib.linux-armv7l-3.9/bx/align/_epo.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T03:29:45,572 copying build/lib.linux-armv7l-3.9/bx/gene_reader.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,575 copying build/lib.linux-armv7l-3.9/bx/interval_index_file.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,577 copying build/lib.linux-armv7l-3.9/bx/bitset_utils.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,579 copying build/lib.linux-armv7l-3.9/bx/bitset_builders.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,582 creating build/bdist.linux-armv7l/wheel/bx/tabular 2021-07-15T03:29:45,583 copying build/lib.linux-armv7l-3.9/bx/tabular/__init__.py -> build/bdist.linux-armv7l/wheel/bx/tabular 2021-07-15T03:29:45,585 copying build/lib.linux-armv7l-3.9/bx/tabular/io.py -> build/bdist.linux-armv7l/wheel/bx/tabular 2021-07-15T03:29:45,588 copying build/lib.linux-armv7l-3.9/bx/binned_array.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,590 copying build/lib.linux-armv7l-3.9/bx/__init__.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,592 copying build/lib.linux-armv7l-3.9/bx/wiggle.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,594 creating build/bdist.linux-armv7l/wheel/bx/intseq 2021-07-15T03:29:45,595 copying build/lib.linux-armv7l-3.9/bx/intseq/__init__.py -> build/bdist.linux-armv7l/wheel/bx/intseq 2021-07-15T03:29:45,598 copying build/lib.linux-armv7l-3.9/bx/intseq/ngramcount.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/intseq 2021-07-15T03:29:45,604 copying build/lib.linux-armv7l-3.9/bx/_seqmapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,617 creating build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,618 copying build/lib.linux-armv7l-3.9/bx/misc/bgzf_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,620 copying build/lib.linux-armv7l-3.9/bx/misc/seekbzip2_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,622 copying build/lib.linux-armv7l-3.9/bx/misc/seeklzop_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,624 copying build/lib.linux-armv7l-3.9/bx/misc/readlengths.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,625 copying build/lib.linux-armv7l-3.9/bx/misc/cdb.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,628 copying build/lib.linux-armv7l-3.9/bx/misc/seeklzop.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,630 copying build/lib.linux-armv7l-3.9/bx/misc/_seekbzip2.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,636 copying build/lib.linux-armv7l-3.9/bx/misc/__init__.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,638 copying build/lib.linux-armv7l-3.9/bx/misc/cdb_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,640 copying build/lib.linux-armv7l-3.9/bx/misc/filecache.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,642 copying build/lib.linux-armv7l-3.9/bx/misc/binary_file.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,644 copying build/lib.linux-armv7l-3.9/bx/misc/bgzf.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,651 copying build/lib.linux-armv7l-3.9/bx/misc/filecache_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,653 copying build/lib.linux-armv7l-3.9/bx/misc/seekbzip2.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T03:29:45,656 creating build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T03:29:45,657 copying build/lib.linux-armv7l-3.9/bx/cookbook/doc_optparse.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T03:29:45,659 copying build/lib.linux-armv7l-3.9/bx/cookbook/argparse.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T03:29:45,664 copying build/lib.linux-armv7l-3.9/bx/cookbook/__init__.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T03:29:45,666 copying build/lib.linux-armv7l-3.9/bx/cookbook/progress_bar.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T03:29:45,668 copying build/lib.linux-armv7l-3.9/bx/cookbook/attribute.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T03:29:45,671 creating build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T03:29:45,672 copying build/lib.linux-armv7l-3.9/bx/arrays/array_tree_tests.py -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T03:29:45,674 copying build/lib.linux-armv7l-3.9/bx/arrays/bed.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T03:29:45,681 copying build/lib.linux-armv7l-3.9/bx/arrays/array_tree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T03:29:45,715 copying build/lib.linux-armv7l-3.9/bx/arrays/__init__.py -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T03:29:45,717 copying build/lib.linux-armv7l-3.9/bx/arrays/wiggle.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T03:29:45,730 copying build/lib.linux-armv7l-3.9/bx/bitset_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,732 copying build/lib.linux-armv7l-3.9/bx/interval_index_file_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T03:29:45,734 creating build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,735 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_score_maf.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,738 copying build/lib.linux-armv7l-3.9/bx/pwm/bed_score_aligned_pwm.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,739 copying build/lib.linux-armv7l-3.9/bx/pwm/position_weight_matrix.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,743 copying build/lib.linux-armv7l-3.9/bx/pwm/_position_weight_matrix.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,747 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_tests.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,750 copying build/lib.linux-armv7l-3.9/bx/pwm/maf_select_motifs.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,752 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_score_motifs.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,754 copying build/lib.linux-armv7l-3.9/bx/pwm/__init__.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,755 copying build/lib.linux-armv7l-3.9/bx/pwm/bed_score_aligned_string.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,757 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_score_positions.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T03:29:45,760 creating build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,761 copying build/lib.linux-armv7l-3.9/bx_extras/lrucache.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,763 copying build/lib.linux-armv7l-3.9/bx_extras/fpconst.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,765 copying build/lib.linux-armv7l-3.9/bx_extras/stats.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,773 copying build/lib.linux-armv7l-3.9/bx_extras/pyparsing.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,778 copying build/lib.linux-armv7l-3.9/bx_extras/__init__.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,780 copying build/lib.linux-armv7l-3.9/bx_extras/pstat.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,783 copying build/lib.linux-armv7l-3.9/bx_extras/fpconst_tests.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T03:29:45,784 copying build/lib.linux-armv7l-3.9/psyco_full.py -> build/bdist.linux-armv7l/wheel 2021-07-15T03:29:45,786 running install_egg_info 2021-07-15T03:29:45,809 running egg_info 2021-07-15T03:29:45,810 writing lib/bx_python.egg-info/PKG-INFO 2021-07-15T03:29:45,812 writing dependency_links to lib/bx_python.egg-info/dependency_links.txt 2021-07-15T03:29:45,815 writing requirements to lib/bx_python.egg-info/requires.txt 2021-07-15T03:29:45,816 writing top-level names to lib/bx_python.egg-info/top_level.txt 2021-07-15T03:29:45,889 reading manifest file 'lib/bx_python.egg-info/SOURCES.txt' 2021-07-15T03:29:45,902 reading manifest template 'MANIFEST.in' 2021-07-15T03:29:45,903 warning: no files found matching 'distribute_setup.py' 2021-07-15T03:29:46,131 adding license file 'LICENSE' 2021-07-15T03:29:46,147 writing manifest file 'lib/bx_python.egg-info/SOURCES.txt' 2021-07-15T03:29:46,149 Copying lib/bx_python.egg-info to build/bdist.linux-armv7l/wheel/bx_python-0.8.5-py3.9.egg-info 2021-07-15T03:29:46,163 running install_scripts 2021-07-15T03:29:46,226 creating build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data 2021-07-15T03:29:46,227 creating build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,228 copying build/scripts-3.9/maf_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,230 copying build/scripts-3.9/maf_to_axt.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,236 copying build/scripts-3.9/nib_length.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,239 copying build/scripts-3.9/maf_shuffle_columns.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,241 copying build/scripts-3.9/maf_drop_overlapping.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,243 copying build/scripts-3.9/maf_div_sites.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,245 copying build/scripts-3.9/bed_complement.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,248 copying build/scripts-3.9/bed_coverage_by_interval.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,250 copying build/scripts-3.9/bed_build_windows.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,252 copying build/scripts-3.9/maf_percent_identity.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,254 copying build/scripts-3.9/table_add_column.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,256 copying build/scripts-3.9/maf_extract_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,258 copying build/scripts-3.9/maf_tile_2.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,261 copying build/scripts-3.9/line_select.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,263 copying build/scripts-3.9/align_print_template.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,265 copying build/scripts-3.9/bed_intersect.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,268 copying build/scripts-3.9/maf_translate_chars.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,270 copying build/scripts-3.9/axt_to_maf.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,272 copying build/scripts-3.9/pretty_table.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,274 copying build/scripts-3.9/bed_count_overlapping.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,276 copying build/scripts-3.9/nib_chrom_intervals_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,278 copying build/scripts-3.9/maf_word_frequency.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,280 copying build/scripts-3.9/bnMapper.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,283 copying build/scripts-3.9/interval_join.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,285 copying build/scripts-3.9/interval_count_intersections.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,287 copying build/scripts-3.9/maf_randomize.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,290 copying build/scripts-3.9/mMK_bitset.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,293 copying build/scripts-3.9/lzop_build_offset_table.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,297 copying build/scripts-3.9/maf_col_counts_all.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,299 copying build/scripts-3.9/int_seqs_to_char_strings.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,301 copying build/scripts-3.9/out_to_chain.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,304 copying build/scripts-3.9/nib_intervals_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,306 copying build/scripts-3.9/wiggle_to_chr_binned_array.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,309 copying build/scripts-3.9/maf_to_concat_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,311 copying build/scripts-3.9/table_filter.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,313 copying build/scripts-3.9/maf_filter.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,315 copying build/scripts-3.9/maf_tile_2bit.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,318 copying build/scripts-3.9/maf_count.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,320 copying build/scripts-3.9/maf_split_by_src.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,322 copying build/scripts-3.9/maf_col_counts.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,324 copying build/scripts-3.9/bed_count_by_interval.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,326 copying build/scripts-3.9/lav_to_maf.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,329 copying build/scripts-3.9/maf_thread_for_species.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,331 copying build/scripts-3.9/axt_extract_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,333 copying build/scripts-3.9/mask_quality.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,335 copying build/scripts-3.9/maf_mapping_word_frequency.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,338 copying build/scripts-3.9/axt_to_lav.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,340 copying build/scripts-3.9/axt_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,342 copying build/scripts-3.9/wiggle_to_binned_array.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,344 copying build/scripts-3.9/bed_bigwig_profile.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,346 copying build/scripts-3.9/bed_intersect_basewise.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,349 copying build/scripts-3.9/wiggle_to_simple.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,351 copying build/scripts-3.9/maf_gc_content.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,353 copying build/scripts-3.9/tfloc_summary.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,355 copying build/scripts-3.9/maf_limit_to_species.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,357 copying build/scripts-3.9/maf_percent_columns_matching.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,360 copying build/scripts-3.9/maf_interval_alignibility.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,362 copying build/scripts-3.9/maf_extract_chrom_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,364 copying build/scripts-3.9/bed_diff_basewise_summary.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,367 copying build/scripts-3.9/bed_subtract_basewise.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,369 copying build/scripts-3.9/maf_build_index.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,371 copying build/scripts-3.9/maf_print_scores.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,373 copying build/scripts-3.9/maf_mask_cpg.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,375 copying build/scripts-3.9/random_lines.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,377 copying build/scripts-3.9/maf_gap_frequency.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,380 copying build/scripts-3.9/maf_select.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,382 copying build/scripts-3.9/gene_fourfold_sites.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,384 copying build/scripts-3.9/div_snp_table_chr.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,387 copying build/scripts-3.9/maf_mean_length_ungapped_piece.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,389 copying build/scripts-3.9/maf_filter_max_wc.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,391 copying build/scripts-3.9/get_scores_in_intervals.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,394 copying build/scripts-3.9/prefix_lines.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,396 copying build/scripts-3.9/bed_merge_overlapping.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,398 copying build/scripts-3.9/maf_extract_ranges_indexed.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,400 copying build/scripts-3.9/bed_extend_to.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,403 copying build/scripts-3.9/wiggle_to_array_tree.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,405 copying build/scripts-3.9/lav_to_axt.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,407 copying build/scripts-3.9/bed_rand_intersect.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,409 copying build/scripts-3.9/one_field_per_line.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,411 copying build/scripts-3.9/maf_covered_regions.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,413 copying build/scripts-3.9/qv_to_bqv.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,416 copying build/scripts-3.9/maf_chunk.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,418 copying build/scripts-3.9/maf_to_int_seqs.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,420 copying build/scripts-3.9/aggregate_scores_in_intervals.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,422 copying build/scripts-3.9/bed_coverage.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,424 copying build/scripts-3.9/maf_species_in_all_files.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,426 copying build/scripts-3.9/maf_print_chroms.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,428 copying build/scripts-3.9/maf_chop.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,430 copying build/scripts-3.9/maf_covered_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,432 copying build/scripts-3.9/maf_region_coverage_by_src.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,434 copying build/scripts-3.9/find_in_sorted_file.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,437 copying build/scripts-3.9/maf_truncate.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,439 copying build/scripts-3.9/maf_tile.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,442 copying build/scripts-3.9/ucsc_gene_table_to_intervals.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts 2021-07-15T03:29:46,444 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_to_fasta.py to 755 2021-07-15T03:29:46,444 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_to_axt.py to 755 2021-07-15T03:29:46,445 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/nib_length.py to 755 2021-07-15T03:29:46,445 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_shuffle_columns.py to 755 2021-07-15T03:29:46,446 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_drop_overlapping.py to 755 2021-07-15T03:29:46,446 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_div_sites.py to 755 2021-07-15T03:29:46,447 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_complement.py to 755 2021-07-15T03:29:46,447 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_coverage_by_interval.py to 755 2021-07-15T03:29:46,448 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_build_windows.py to 755 2021-07-15T03:29:46,448 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_percent_identity.py to 755 2021-07-15T03:29:46,448 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/table_add_column.py to 755 2021-07-15T03:29:46,449 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_extract_ranges.py to 755 2021-07-15T03:29:46,449 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_tile_2.py to 755 2021-07-15T03:29:46,450 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/line_select.py to 755 2021-07-15T03:29:46,450 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/align_print_template.py to 755 2021-07-15T03:29:46,451 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_intersect.py to 755 2021-07-15T03:29:46,451 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_translate_chars.py to 755 2021-07-15T03:29:46,452 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/axt_to_maf.py to 755 2021-07-15T03:29:46,452 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/pretty_table.py to 755 2021-07-15T03:29:46,453 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_count_overlapping.py to 755 2021-07-15T03:29:46,453 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/nib_chrom_intervals_to_fasta.py to 755 2021-07-15T03:29:46,454 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_word_frequency.py to 755 2021-07-15T03:29:46,454 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bnMapper.py to 755 2021-07-15T03:29:46,455 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/interval_join.py to 755 2021-07-15T03:29:46,455 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/interval_count_intersections.py to 755 2021-07-15T03:29:46,455 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_randomize.py to 755 2021-07-15T03:29:46,456 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/mMK_bitset.py to 755 2021-07-15T03:29:46,456 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/lzop_build_offset_table.py to 755 2021-07-15T03:29:46,457 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_col_counts_all.py to 755 2021-07-15T03:29:46,457 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/int_seqs_to_char_strings.py to 755 2021-07-15T03:29:46,458 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/out_to_chain.py to 755 2021-07-15T03:29:46,458 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/nib_intervals_to_fasta.py to 755 2021-07-15T03:29:46,459 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/wiggle_to_chr_binned_array.py to 755 2021-07-15T03:29:46,459 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_to_concat_fasta.py to 755 2021-07-15T03:29:46,460 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/table_filter.py to 755 2021-07-15T03:29:46,460 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_filter.py to 755 2021-07-15T03:29:46,461 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_tile_2bit.py to 755 2021-07-15T03:29:46,461 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_count.py to 755 2021-07-15T03:29:46,462 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_split_by_src.py to 755 2021-07-15T03:29:46,462 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_col_counts.py to 755 2021-07-15T03:29:46,462 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_count_by_interval.py to 755 2021-07-15T03:29:46,463 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/lav_to_maf.py to 755 2021-07-15T03:29:46,463 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_thread_for_species.py to 755 2021-07-15T03:29:46,464 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/axt_extract_ranges.py to 755 2021-07-15T03:29:46,464 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/mask_quality.py to 755 2021-07-15T03:29:46,465 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_mapping_word_frequency.py to 755 2021-07-15T03:29:46,465 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/axt_to_lav.py to 755 2021-07-15T03:29:46,466 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/axt_to_fasta.py to 755 2021-07-15T03:29:46,466 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/wiggle_to_binned_array.py to 755 2021-07-15T03:29:46,467 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_bigwig_profile.py to 755 2021-07-15T03:29:46,467 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_intersect_basewise.py to 755 2021-07-15T03:29:46,468 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/wiggle_to_simple.py to 755 2021-07-15T03:29:46,468 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_gc_content.py to 755 2021-07-15T03:29:46,468 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/tfloc_summary.py to 755 2021-07-15T03:29:46,469 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_limit_to_species.py to 755 2021-07-15T03:29:46,469 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_percent_columns_matching.py to 755 2021-07-15T03:29:46,470 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_interval_alignibility.py to 755 2021-07-15T03:29:46,470 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_extract_chrom_ranges.py to 755 2021-07-15T03:29:46,471 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_diff_basewise_summary.py to 755 2021-07-15T03:29:46,471 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_subtract_basewise.py to 755 2021-07-15T03:29:46,472 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_build_index.py to 755 2021-07-15T03:29:46,472 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_print_scores.py to 755 2021-07-15T03:29:46,473 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_mask_cpg.py to 755 2021-07-15T03:29:46,473 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/random_lines.py to 755 2021-07-15T03:29:46,474 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_gap_frequency.py to 755 2021-07-15T03:29:46,474 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_select.py to 755 2021-07-15T03:29:46,474 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/gene_fourfold_sites.py to 755 2021-07-15T03:29:46,475 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/div_snp_table_chr.py to 755 2021-07-15T03:29:46,475 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_mean_length_ungapped_piece.py to 755 2021-07-15T03:29:46,476 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_filter_max_wc.py to 755 2021-07-15T03:29:46,476 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/get_scores_in_intervals.py to 755 2021-07-15T03:29:46,477 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/prefix_lines.py to 755 2021-07-15T03:29:46,477 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_merge_overlapping.py to 755 2021-07-15T03:29:46,478 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_extract_ranges_indexed.py to 755 2021-07-15T03:29:46,478 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_extend_to.py to 755 2021-07-15T03:29:46,479 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/wiggle_to_array_tree.py to 755 2021-07-15T03:29:46,479 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/lav_to_axt.py to 755 2021-07-15T03:29:46,480 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_rand_intersect.py to 755 2021-07-15T03:29:46,480 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/one_field_per_line.py to 755 2021-07-15T03:29:46,481 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_covered_regions.py to 755 2021-07-15T03:29:46,481 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/qv_to_bqv.py to 755 2021-07-15T03:29:46,482 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_chunk.py to 755 2021-07-15T03:29:46,482 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_to_int_seqs.py to 755 2021-07-15T03:29:46,483 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/aggregate_scores_in_intervals.py to 755 2021-07-15T03:29:46,483 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/bed_coverage.py to 755 2021-07-15T03:29:46,483 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_species_in_all_files.py to 755 2021-07-15T03:29:46,484 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_print_chroms.py to 755 2021-07-15T03:29:46,484 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_chop.py to 755 2021-07-15T03:29:46,485 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_covered_ranges.py to 755 2021-07-15T03:29:46,485 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_region_coverage_by_src.py to 755 2021-07-15T03:29:46,486 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/find_in_sorted_file.py to 755 2021-07-15T03:29:46,486 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_truncate.py to 755 2021-07-15T03:29:46,487 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/maf_tile.py to 755 2021-07-15T03:29:46,487 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.5.data/scripts/ucsc_gene_table_to_intervals.py to 755 2021-07-15T03:29:46,600 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-15T03:29:46,605 creating build/bdist.linux-armv7l/wheel/bx_python-0.8.5.dist-info/WHEEL 2021-07-15T03:29:46,608 creating '/tmp/pip-wheel-2uoka1u0/bx_python-0.8.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-15T03:29:46,610 adding 'psyco_full.py' 2021-07-15T03:29:46,612 adding 'bx/__init__.py' 2021-07-15T03:29:46,690 adding 'bx/_seqmapping.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:46,696 adding 'bx/binned_array.py' 2021-07-15T03:29:46,697 adding 'bx/binned_array_tests.py' 2021-07-15T03:29:46,784 adding 'bx/bitset.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:46,789 adding 'bx/bitset_builders.py' 2021-07-15T03:29:46,791 adding 'bx/bitset_tests.py' 2021-07-15T03:29:46,792 adding 'bx/bitset_utils.py' 2021-07-15T03:29:46,794 adding 'bx/filter.py' 2021-07-15T03:29:46,796 adding 'bx/gene_reader.py' 2021-07-15T03:29:46,799 adding 'bx/interval_index_file.py' 2021-07-15T03:29:46,800 adding 'bx/interval_index_file_tests.py' 2021-07-15T03:29:46,802 adding 'bx/seqmapping.py' 2021-07-15T03:29:46,804 adding 'bx/seqmapping_tests.py' 2021-07-15T03:29:46,805 adding 'bx/wiggle.py' 2021-07-15T03:29:46,807 adding 'bx/wiggle_tests.py' 2021-07-15T03:29:46,809 adding 'bx/align/__init__.py' 2021-07-15T03:29:46,823 adding 'bx/align/_core.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:46,971 adding 'bx/align/_epo.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:46,979 adding 'bx/align/axt.py' 2021-07-15T03:29:46,982 adding 'bx/align/core.py' 2021-07-15T03:29:46,984 adding 'bx/align/epo.py' 2021-07-15T03:29:46,986 adding 'bx/align/epo_tests.py' 2021-07-15T03:29:46,990 adding 'bx/align/lav.py' 2021-07-15T03:29:46,991 adding 'bx/align/lav_tests.py' 2021-07-15T03:29:46,993 adding 'bx/align/maf.py' 2021-07-15T03:29:46,995 adding 'bx/align/maf_tests.py' 2021-07-15T03:29:46,998 adding 'bx/align/score.py' 2021-07-15T03:29:46,999 adding 'bx/align/score_tests.py' 2021-07-15T03:29:47,001 adding 'bx/align/sitemask/__init__.py' 2021-07-15T03:29:47,050 adding 'bx/align/sitemask/_cpg.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:47,053 adding 'bx/align/sitemask/core.py' 2021-07-15T03:29:47,055 adding 'bx/align/sitemask/cpg.py' 2021-07-15T03:29:47,057 adding 'bx/align/sitemask/quality.py' 2021-07-15T03:29:47,058 adding 'bx/align/sitemask/sitemask_tests.py' 2021-07-15T03:29:47,060 adding 'bx/align/tools/__init__.py' 2021-07-15T03:29:47,062 adding 'bx/align/tools/chop.py' 2021-07-15T03:29:47,063 adding 'bx/align/tools/fuse.py' 2021-07-15T03:29:47,065 adding 'bx/align/tools/thread.py' 2021-07-15T03:29:47,067 adding 'bx/align/tools/tile.py' 2021-07-15T03:29:47,069 adding 'bx/arrays/__init__.py' 2021-07-15T03:29:47,370 adding 'bx/arrays/array_tree.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:47,385 adding 'bx/arrays/array_tree_tests.py' 2021-07-15T03:29:47,431 adding 'bx/arrays/bed.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:47,511 adding 'bx/arrays/wiggle.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:47,516 adding 'bx/bbi/__init__.py' 2021-07-15T03:29:47,771 adding 'bx/bbi/bbi_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:47,918 adding 'bx/bbi/bigbed_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,114 adding 'bx/bbi/bigwig_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,124 adding 'bx/bbi/bigwig_tests.py' 2021-07-15T03:29:48,205 adding 'bx/bbi/bpt_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,332 adding 'bx/bbi/cirtree_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,340 adding 'bx/cookbook/__init__.py' 2021-07-15T03:29:48,351 adding 'bx/cookbook/argparse.py' 2021-07-15T03:29:48,353 adding 'bx/cookbook/attribute.py' 2021-07-15T03:29:48,355 adding 'bx/cookbook/doc_optparse.py' 2021-07-15T03:29:48,356 adding 'bx/cookbook/progress_bar.py' 2021-07-15T03:29:48,358 adding 'bx/intervals/__init__.py' 2021-07-15T03:29:48,390 adding 'bx/intervals/cluster.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,393 adding 'bx/intervals/cluster_tests.py' 2021-07-15T03:29:48,521 adding 'bx/intervals/intersection.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,529 adding 'bx/intervals/intersection_tests.py' 2021-07-15T03:29:48,531 adding 'bx/intervals/io.py' 2021-07-15T03:29:48,533 adding 'bx/intervals/random_intervals.py' 2021-07-15T03:29:48,535 adding 'bx/intervals/operations/__init__.py' 2021-07-15T03:29:48,537 adding 'bx/intervals/operations/base_coverage.py' 2021-07-15T03:29:48,538 adding 'bx/intervals/operations/complement.py' 2021-07-15T03:29:48,540 adding 'bx/intervals/operations/concat.py' 2021-07-15T03:29:48,541 adding 'bx/intervals/operations/coverage.py' 2021-07-15T03:29:48,543 adding 'bx/intervals/operations/find_clusters.py' 2021-07-15T03:29:48,545 adding 'bx/intervals/operations/intersect.py' 2021-07-15T03:29:48,547 adding 'bx/intervals/operations/join.py' 2021-07-15T03:29:48,548 adding 'bx/intervals/operations/merge.py' 2021-07-15T03:29:48,550 adding 'bx/intervals/operations/quicksect.py' 2021-07-15T03:29:48,552 adding 'bx/intervals/operations/subtract.py' 2021-07-15T03:29:48,554 adding 'bx/intseq/__init__.py' 2021-07-15T03:29:48,583 adding 'bx/intseq/ngramcount.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,586 adding 'bx/misc/__init__.py' 2021-07-15T03:29:48,627 adding 'bx/misc/_seekbzip2.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,666 adding 'bx/misc/bgzf.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,669 adding 'bx/misc/bgzf_tests.py' 2021-07-15T03:29:48,670 adding 'bx/misc/binary_file.py' 2021-07-15T03:29:48,672 adding 'bx/misc/cdb.py' 2021-07-15T03:29:48,674 adding 'bx/misc/cdb_tests.py' 2021-07-15T03:29:48,675 adding 'bx/misc/filecache.py' 2021-07-15T03:29:48,677 adding 'bx/misc/filecache_tests.py' 2021-07-15T03:29:48,678 adding 'bx/misc/readlengths.py' 2021-07-15T03:29:48,680 adding 'bx/misc/seekbzip2.py' 2021-07-15T03:29:48,682 adding 'bx/misc/seekbzip2_tests.py' 2021-07-15T03:29:48,683 adding 'bx/misc/seeklzop.py' 2021-07-15T03:29:48,685 adding 'bx/misc/seeklzop_tests.py' 2021-07-15T03:29:48,687 adding 'bx/motif/__init__.py' 2021-07-15T03:29:48,708 adding 'bx/motif/_pwm.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,711 adding 'bx/motif/pwm.py' 2021-07-15T03:29:48,712 adding 'bx/motif/pwm_tests.py' 2021-07-15T03:29:48,714 adding 'bx/motif/io/__init__.py' 2021-07-15T03:29:48,716 adding 'bx/motif/io/transfac.py' 2021-07-15T03:29:48,718 adding 'bx/motif/io/transfac_tests.py' 2021-07-15T03:29:48,720 adding 'bx/motif/logo/__init__.py' 2021-07-15T03:29:48,722 adding 'bx/motif/logo/template.ps' 2021-07-15T03:29:48,724 adding 'bx/phylo/__init__.py' 2021-07-15T03:29:48,725 adding 'bx/phylo/newick.py' 2021-07-15T03:29:48,727 adding 'bx/phylo/newick_tests.py' 2021-07-15T03:29:48,729 adding 'bx/phylo/phast.py' 2021-07-15T03:29:48,730 adding 'bx/phylo/phast_tests.py' 2021-07-15T03:29:48,732 adding 'bx/pwm/__init__.py' 2021-07-15T03:29:48,746 adding 'bx/pwm/_position_weight_matrix.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,749 adding 'bx/pwm/bed_score_aligned_pwm.py' 2021-07-15T03:29:48,750 adding 'bx/pwm/bed_score_aligned_string.py' 2021-07-15T03:29:48,752 adding 'bx/pwm/maf_select_motifs.py' 2021-07-15T03:29:48,756 adding 'bx/pwm/position_weight_matrix.py' 2021-07-15T03:29:48,758 adding 'bx/pwm/pwm_score_maf.py' 2021-07-15T03:29:48,760 adding 'bx/pwm/pwm_score_motifs.py' 2021-07-15T03:29:48,761 adding 'bx/pwm/pwm_score_positions.py' 2021-07-15T03:29:48,763 adding 'bx/pwm/pwm_tests.py' 2021-07-15T03:29:48,765 adding 'bx/seq/__init__.py' 2021-07-15T03:29:48,783 adding 'bx/seq/_nib.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,822 adding 'bx/seq/_twobit.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T03:29:48,825 adding 'bx/seq/core.py' 2021-07-15T03:29:48,827 adding 'bx/seq/fasta.py' 2021-07-15T03:29:48,829 adding 'bx/seq/fasta_tests.py' 2021-07-15T03:29:48,830 adding 'bx/seq/nib.py' 2021-07-15T03:29:48,832 adding 'bx/seq/nib_tests.py' 2021-07-15T03:29:48,834 adding 'bx/seq/qdna.py' 2021-07-15T03:29:48,835 adding 'bx/seq/qdna_tests.py' 2021-07-15T03:29:48,837 adding 'bx/seq/seq.py' 2021-07-15T03:29:48,839 adding 'bx/seq/seq_tests.py' 2021-07-15T03:29:48,840 adding 'bx/seq/twobit.py' 2021-07-15T03:29:48,842 adding 'bx/seq/twobit_tests.py' 2021-07-15T03:29:48,844 adding 'bx/tabular/__init__.py' 2021-07-15T03:29:48,845 adding 'bx/tabular/io.py' 2021-07-15T03:29:48,847 adding 'bx_extras/__init__.py' 2021-07-15T03:29:48,849 adding 'bx_extras/fpconst.py' 2021-07-15T03:29:48,850 adding 'bx_extras/fpconst_tests.py' 2021-07-15T03:29:48,852 adding 'bx_extras/lrucache.py' 2021-07-15T03:29:48,857 adding 'bx_extras/pstat.py' 2021-07-15T03:29:48,874 adding 'bx_extras/pyparsing.py' 2021-07-15T03:29:48,894 adding 'bx_extras/stats.py' 2021-07-15T03:29:48,900 adding 'bx_python-0.8.5.data/scripts/aggregate_scores_in_intervals.py' 2021-07-15T03:29:48,901 adding 'bx_python-0.8.5.data/scripts/align_print_template.py' 2021-07-15T03:29:48,903 adding 'bx_python-0.8.5.data/scripts/axt_extract_ranges.py' 2021-07-15T03:29:48,904 adding 'bx_python-0.8.5.data/scripts/axt_to_fasta.py' 2021-07-15T03:29:48,913 adding 'bx_python-0.8.5.data/scripts/axt_to_lav.py' 2021-07-15T03:29:48,914 adding 'bx_python-0.8.5.data/scripts/axt_to_maf.py' 2021-07-15T03:29:48,916 adding 'bx_python-0.8.5.data/scripts/bed_bigwig_profile.py' 2021-07-15T03:29:48,917 adding 'bx_python-0.8.5.data/scripts/bed_build_windows.py' 2021-07-15T03:29:48,919 adding 'bx_python-0.8.5.data/scripts/bed_complement.py' 2021-07-15T03:29:48,920 adding 'bx_python-0.8.5.data/scripts/bed_count_by_interval.py' 2021-07-15T03:29:48,922 adding 'bx_python-0.8.5.data/scripts/bed_count_overlapping.py' 2021-07-15T03:29:48,923 adding 'bx_python-0.8.5.data/scripts/bed_coverage.py' 2021-07-15T03:29:48,925 adding 'bx_python-0.8.5.data/scripts/bed_coverage_by_interval.py' 2021-07-15T03:29:48,926 adding 'bx_python-0.8.5.data/scripts/bed_diff_basewise_summary.py' 2021-07-15T03:29:48,928 adding 'bx_python-0.8.5.data/scripts/bed_extend_to.py' 2021-07-15T03:29:48,929 adding 'bx_python-0.8.5.data/scripts/bed_intersect.py' 2021-07-15T03:29:48,930 adding 'bx_python-0.8.5.data/scripts/bed_intersect_basewise.py' 2021-07-15T03:29:48,932 adding 'bx_python-0.8.5.data/scripts/bed_merge_overlapping.py' 2021-07-15T03:29:48,934 adding 'bx_python-0.8.5.data/scripts/bed_rand_intersect.py' 2021-07-15T03:29:48,935 adding 'bx_python-0.8.5.data/scripts/bed_subtract_basewise.py' 2021-07-15T03:29:48,938 adding 'bx_python-0.8.5.data/scripts/bnMapper.py' 2021-07-15T03:29:48,940 adding 'bx_python-0.8.5.data/scripts/div_snp_table_chr.py' 2021-07-15T03:29:48,941 adding 'bx_python-0.8.5.data/scripts/find_in_sorted_file.py' 2021-07-15T03:29:48,943 adding 'bx_python-0.8.5.data/scripts/gene_fourfold_sites.py' 2021-07-15T03:29:48,945 adding 'bx_python-0.8.5.data/scripts/get_scores_in_intervals.py' 2021-07-15T03:29:48,946 adding 'bx_python-0.8.5.data/scripts/int_seqs_to_char_strings.py' 2021-07-15T03:29:48,948 adding 'bx_python-0.8.5.data/scripts/interval_count_intersections.py' 2021-07-15T03:29:48,949 adding 'bx_python-0.8.5.data/scripts/interval_join.py' 2021-07-15T03:29:48,950 adding 'bx_python-0.8.5.data/scripts/lav_to_axt.py' 2021-07-15T03:29:48,952 adding 'bx_python-0.8.5.data/scripts/lav_to_maf.py' 2021-07-15T03:29:48,953 adding 'bx_python-0.8.5.data/scripts/line_select.py' 2021-07-15T03:29:48,955 adding 'bx_python-0.8.5.data/scripts/lzop_build_offset_table.py' 2021-07-15T03:29:48,957 adding 'bx_python-0.8.5.data/scripts/mMK_bitset.py' 2021-07-15T03:29:48,958 adding 'bx_python-0.8.5.data/scripts/maf_build_index.py' 2021-07-15T03:29:48,960 adding 'bx_python-0.8.5.data/scripts/maf_chop.py' 2021-07-15T03:29:48,961 adding 'bx_python-0.8.5.data/scripts/maf_chunk.py' 2021-07-15T03:29:48,963 adding 'bx_python-0.8.5.data/scripts/maf_col_counts.py' 2021-07-15T03:29:48,964 adding 'bx_python-0.8.5.data/scripts/maf_col_counts_all.py' 2021-07-15T03:29:48,966 adding 'bx_python-0.8.5.data/scripts/maf_count.py' 2021-07-15T03:29:48,967 adding 'bx_python-0.8.5.data/scripts/maf_covered_ranges.py' 2021-07-15T03:29:48,969 adding 'bx_python-0.8.5.data/scripts/maf_covered_regions.py' 2021-07-15T03:29:48,970 adding 'bx_python-0.8.5.data/scripts/maf_div_sites.py' 2021-07-15T03:29:48,972 adding 'bx_python-0.8.5.data/scripts/maf_drop_overlapping.py' 2021-07-15T03:29:48,973 adding 'bx_python-0.8.5.data/scripts/maf_extract_chrom_ranges.py' 2021-07-15T03:29:48,975 adding 'bx_python-0.8.5.data/scripts/maf_extract_ranges.py' 2021-07-15T03:29:48,977 adding 'bx_python-0.8.5.data/scripts/maf_extract_ranges_indexed.py' 2021-07-15T03:29:48,979 adding 'bx_python-0.8.5.data/scripts/maf_filter.py' 2021-07-15T03:29:48,980 adding 'bx_python-0.8.5.data/scripts/maf_filter_max_wc.py' 2021-07-15T03:29:48,981 adding 'bx_python-0.8.5.data/scripts/maf_gap_frequency.py' 2021-07-15T03:29:48,983 adding 'bx_python-0.8.5.data/scripts/maf_gc_content.py' 2021-07-15T03:29:48,984 adding 'bx_python-0.8.5.data/scripts/maf_interval_alignibility.py' 2021-07-15T03:29:48,986 adding 'bx_python-0.8.5.data/scripts/maf_limit_to_species.py' 2021-07-15T03:29:48,987 adding 'bx_python-0.8.5.data/scripts/maf_mapping_word_frequency.py' 2021-07-15T03:29:48,989 adding 'bx_python-0.8.5.data/scripts/maf_mask_cpg.py' 2021-07-15T03:29:48,990 adding 'bx_python-0.8.5.data/scripts/maf_mean_length_ungapped_piece.py' 2021-07-15T03:29:48,992 adding 'bx_python-0.8.5.data/scripts/maf_percent_columns_matching.py' 2021-07-15T03:29:48,993 adding 'bx_python-0.8.5.data/scripts/maf_percent_identity.py' 2021-07-15T03:29:48,996 adding 'bx_python-0.8.5.data/scripts/maf_print_chroms.py' 2021-07-15T03:29:48,998 adding 'bx_python-0.8.5.data/scripts/maf_print_scores.py' 2021-07-15T03:29:48,999 adding 'bx_python-0.8.5.data/scripts/maf_randomize.py' 2021-07-15T03:29:49,001 adding 'bx_python-0.8.5.data/scripts/maf_region_coverage_by_src.py' 2021-07-15T03:29:49,002 adding 'bx_python-0.8.5.data/scripts/maf_select.py' 2021-07-15T03:29:49,003 adding 'bx_python-0.8.5.data/scripts/maf_shuffle_columns.py' 2021-07-15T03:29:49,005 adding 'bx_python-0.8.5.data/scripts/maf_species_in_all_files.py' 2021-07-15T03:29:49,006 adding 'bx_python-0.8.5.data/scripts/maf_split_by_src.py' 2021-07-15T03:29:49,008 adding 'bx_python-0.8.5.data/scripts/maf_thread_for_species.py' 2021-07-15T03:29:49,010 adding 'bx_python-0.8.5.data/scripts/maf_tile.py' 2021-07-15T03:29:49,012 adding 'bx_python-0.8.5.data/scripts/maf_tile_2.py' 2021-07-15T03:29:49,014 adding 'bx_python-0.8.5.data/scripts/maf_tile_2bit.py' 2021-07-15T03:29:49,016 adding 'bx_python-0.8.5.data/scripts/maf_to_axt.py' 2021-07-15T03:29:49,018 adding 'bx_python-0.8.5.data/scripts/maf_to_concat_fasta.py' 2021-07-15T03:29:49,019 adding 'bx_python-0.8.5.data/scripts/maf_to_fasta.py' 2021-07-15T03:29:49,021 adding 'bx_python-0.8.5.data/scripts/maf_to_int_seqs.py' 2021-07-15T03:29:49,022 adding 'bx_python-0.8.5.data/scripts/maf_translate_chars.py' 2021-07-15T03:29:49,024 adding 'bx_python-0.8.5.data/scripts/maf_truncate.py' 2021-07-15T03:29:49,025 adding 'bx_python-0.8.5.data/scripts/maf_word_frequency.py' 2021-07-15T03:29:49,027 adding 'bx_python-0.8.5.data/scripts/mask_quality.py' 2021-07-15T03:29:49,028 adding 'bx_python-0.8.5.data/scripts/nib_chrom_intervals_to_fasta.py' 2021-07-15T03:29:49,030 adding 'bx_python-0.8.5.data/scripts/nib_intervals_to_fasta.py' 2021-07-15T03:29:49,031 adding 'bx_python-0.8.5.data/scripts/nib_length.py' 2021-07-15T03:29:49,033 adding 'bx_python-0.8.5.data/scripts/one_field_per_line.py' 2021-07-15T03:29:49,034 adding 'bx_python-0.8.5.data/scripts/out_to_chain.py' 2021-07-15T03:29:49,035 adding 'bx_python-0.8.5.data/scripts/prefix_lines.py' 2021-07-15T03:29:49,037 adding 'bx_python-0.8.5.data/scripts/pretty_table.py' 2021-07-15T03:29:49,038 adding 'bx_python-0.8.5.data/scripts/qv_to_bqv.py' 2021-07-15T03:29:49,040 adding 'bx_python-0.8.5.data/scripts/random_lines.py' 2021-07-15T03:29:49,041 adding 'bx_python-0.8.5.data/scripts/table_add_column.py' 2021-07-15T03:29:49,043 adding 'bx_python-0.8.5.data/scripts/table_filter.py' 2021-07-15T03:29:49,044 adding 'bx_python-0.8.5.data/scripts/tfloc_summary.py' 2021-07-15T03:29:49,046 adding 'bx_python-0.8.5.data/scripts/ucsc_gene_table_to_intervals.py' 2021-07-15T03:29:49,047 adding 'bx_python-0.8.5.data/scripts/wiggle_to_array_tree.py' 2021-07-15T03:29:49,049 adding 'bx_python-0.8.5.data/scripts/wiggle_to_binned_array.py' 2021-07-15T03:29:49,050 adding 'bx_python-0.8.5.data/scripts/wiggle_to_chr_binned_array.py' 2021-07-15T03:29:49,052 adding 'bx_python-0.8.5.data/scripts/wiggle_to_simple.py' 2021-07-15T03:29:49,054 adding 'bx_python-0.8.5.dist-info/LICENSE' 2021-07-15T03:29:49,055 adding 'bx_python-0.8.5.dist-info/METADATA' 2021-07-15T03:29:49,057 adding 'bx_python-0.8.5.dist-info/WHEEL' 2021-07-15T03:29:49,058 adding 'bx_python-0.8.5.dist-info/top_level.txt' 2021-07-15T03:29:49,062 adding 'bx_python-0.8.5.dist-info/RECORD' 2021-07-15T03:29:49,135 removing build/bdist.linux-armv7l/wheel 2021-07-15T03:29:49,589 Building wheel for bx-python (setup.py): finished with status 'done' 2021-07-15T03:29:49,641 Created wheel for bx-python: filename=bx_python-0.8.5-cp39-cp39-linux_armv7l.whl size=3952261 sha256=a9d6e912af81d5055caa540fe5e07e881aaa82a1918b4f7bc6a844e92dce66bf 2021-07-15T03:29:49,641 Stored in directory: /tmp/pip-ephem-wheel-cache-87i0j4__/wheels/fb/0d/69/61250cd71602064382fd4f008462744686eaa87785a3fb8eef 2021-07-15T03:29:49,659 Successfully built bx-python 2021-07-15T03:29:49,796 Removed build tracker: '/tmp/pip-req-tracker-vlhmi7gp'