2021-07-15T04:30:49,313 Created temporary directory: /tmp/pip-ephem-wheel-cache-_m_5vidh
2021-07-15T04:30:49,316 Created temporary directory: /tmp/pip-req-tracker-dhbgr5td
2021-07-15T04:30:49,317 Initialized build tracking at /tmp/pip-req-tracker-dhbgr5td
2021-07-15T04:30:49,317 Created build tracker: /tmp/pip-req-tracker-dhbgr5td
2021-07-15T04:30:49,317 Entered build tracker: /tmp/pip-req-tracker-dhbgr5td
2021-07-15T04:30:49,318 Created temporary directory: /tmp/pip-wheel-eanjdjkb
2021-07-15T04:30:49,348 1 location(s) to search for versions of pygom:
2021-07-15T04:30:49,348 * https://pypi.org/simple/pygom/
2021-07-15T04:30:49,348 Fetching project page and analyzing links: https://pypi.org/simple/pygom/
2021-07-15T04:30:49,349 Getting page https://pypi.org/simple/pygom/
2021-07-15T04:30:49,350 Found index url https://pypi.org/simple
2021-07-15T04:30:49,534   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b6/64/9f5f0c582270f4fa6336ab727dc8ae04f4a450307b4159cee9a89cf41706/pygom-0.1.0-py2.7.egg#sha256=a57d8bfa86d68e33737b283d7ae8e211fc7294d446acc21f7889053162977208 (from https://pypi.org/simple/pygom/)
2021-07-15T04:30:49,534   Found link https://files.pythonhosted.org/packages/be/f0/4378974b05e34251b59a7c1ee48e871ab9e61ca804d6b7b84d2b3cd30ccd/pygom-0.1.0.tar.gz#sha256=10a973ac1aeac930fc8ea71507517b48eb9df79ce33d232fd73bfe3d477bc578 (from https://pypi.org/simple/pygom/), version: 0.1.0
2021-07-15T04:30:49,535   Found link https://files.pythonhosted.org/packages/3f/06/5c848ec61811d1cf4544ad492f45c63769bdbc53a898106ae2c7f944eaaf/pygom-0.1.1.tar.gz#sha256=d5eaf3d646b3a8be94580c6761d4a4eca308bfcb2d6de1272de1ed8031e714d8 (from https://pypi.org/simple/pygom/), version: 0.1.1
2021-07-15T04:30:49,535   Found link https://files.pythonhosted.org/packages/24/97/d708814dbc6a86450d134418696b9ef1ffd217abc33c71392df7fab9fe08/pygom-0.1.4.tar.gz#sha256=8bdb39a21332cbe45c63abe5a54a6905c8757201a5f7d4e94b7bf4cacfd9d760 (from https://pypi.org/simple/pygom/), version: 0.1.4
2021-07-15T04:30:49,535   Found link https://files.pythonhosted.org/packages/fa/dc/54b34416f5d21618e781f0fce562a4d85e7291b9e50b9f14c4e9f2d98126/pygom-0.1.5.tar.gz#sha256=6e2183691d9f876d986859287b928b41e6ba384e6bb79e69acc903616e55f082 (from https://pypi.org/simple/pygom/), version: 0.1.5
2021-07-15T04:30:49,535   Found link https://files.pythonhosted.org/packages/06/fe/c0f9fd7db36ef9296a40aa276b772aa5a47d73075ee046270d7c68bd9525/pygom-0.1.6.tar.gz#sha256=4cac2778e81d1f0931b2fe032dd864cf5364b605fbd2d799050d6cbd8efaa8db (from https://pypi.org/simple/pygom/), version: 0.1.6
2021-07-15T04:30:49,536   Found link https://files.pythonhosted.org/packages/a4/32/f5eb25fd1ee4e2fa2d4a71a9eeb152ec453a5f8610f1d2161382175c1471/pygom-0.1.7.tar.gz#sha256=34bb9d154cbb2770e135d918ebbbc8d8e22c44c54456e42c5642f0d2e98425c2 (from https://pypi.org/simple/pygom/), version: 0.1.7
2021-07-15T04:30:49,536 Skipping link: not a file: https://pypi.org/simple/pygom/
2021-07-15T04:30:49,554 Given no hashes to check 1 links for project 'pygom': discarding no candidates
2021-07-15T04:30:49,573 Collecting pygom==0.1.5
2021-07-15T04:30:49,575   Created temporary directory: /tmp/pip-unpack-i9r72fyg
2021-07-15T04:30:49,958   Downloading pygom-0.1.5.tar.gz (427 kB)
2021-07-15T04:30:50,368   Added pygom==0.1.5 from https://files.pythonhosted.org/packages/fa/dc/54b34416f5d21618e781f0fce562a4d85e7291b9e50b9f14c4e9f2d98126/pygom-0.1.5.tar.gz#sha256=6e2183691d9f876d986859287b928b41e6ba384e6bb79e69acc903616e55f082 to build tracker '/tmp/pip-req-tracker-dhbgr5td'
2021-07-15T04:30:50,369     Running setup.py (path:/tmp/pip-wheel-eanjdjkb/pygom_6ce85f6fb1454753ba80c70ef899c35f/setup.py) egg_info for package pygom
2021-07-15T04:30:50,370     Created temporary directory: /tmp/pip-pip-egg-info-e7o2rcw3
2021-07-15T04:30:50,370     Running command python setup.py egg_info
2021-07-15T04:30:54,908     running egg_info
2021-07-15T04:30:54,910     creating /tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info
2021-07-15T04:30:54,912     writing /tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/PKG-INFO
2021-07-15T04:30:54,914     writing dependency_links to /tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/dependency_links.txt
2021-07-15T04:30:54,916     writing requirements to /tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/requires.txt
2021-07-15T04:30:54,917     writing top-level names to /tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/top_level.txt
2021-07-15T04:30:54,919     writing manifest file '/tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/SOURCES.txt'
2021-07-15T04:30:55,128     reading manifest file '/tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/SOURCES.txt'
2021-07-15T04:30:55,130     reading manifest template 'MANIFEST.in'
2021-07-15T04:30:55,132     warning: no files found matching 'data/*.json'
2021-07-15T04:30:55,132     adding license file 'LICENSE.txt'
2021-07-15T04:30:55,136     writing manifest file '/tmp/pip-pip-egg-info-e7o2rcw3/pygom.egg-info/SOURCES.txt'
2021-07-15T04:30:55,252   Source in /tmp/pip-wheel-eanjdjkb/pygom_6ce85f6fb1454753ba80c70ef899c35f has version 0.1.5, which satisfies requirement pygom==0.1.5 from https://files.pythonhosted.org/packages/fa/dc/54b34416f5d21618e781f0fce562a4d85e7291b9e50b9f14c4e9f2d98126/pygom-0.1.5.tar.gz#sha256=6e2183691d9f876d986859287b928b41e6ba384e6bb79e69acc903616e55f082
2021-07-15T04:30:55,253   Removed pygom==0.1.5 from https://files.pythonhosted.org/packages/fa/dc/54b34416f5d21618e781f0fce562a4d85e7291b9e50b9f14c4e9f2d98126/pygom-0.1.5.tar.gz#sha256=6e2183691d9f876d986859287b928b41e6ba384e6bb79e69acc903616e55f082 from build tracker '/tmp/pip-req-tracker-dhbgr5td'
2021-07-15T04:30:55,257 Created temporary directory: /tmp/pip-unpack-1kp_pv1h
2021-07-15T04:30:55,258 Building wheels for collected packages: pygom
2021-07-15T04:30:55,262   Created temporary directory: /tmp/pip-wheel-lokjdyw8
2021-07-15T04:30:55,262   Building wheel for pygom (setup.py): started
2021-07-15T04:30:55,262   Destination directory: /tmp/pip-wheel-lokjdyw8
2021-07-15T04:30:55,263   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-eanjdjkb/pygom_6ce85f6fb1454753ba80c70ef899c35f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-eanjdjkb/pygom_6ce85f6fb1454753ba80c70ef899c35f/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-lokjdyw8
2021-07-15T04:30:57,518   running bdist_wheel
2021-07-15T04:30:57,523   running build
2021-07-15T04:30:57,523   running build_py
2021-07-15T04:30:57,682   creating build
2021-07-15T04:30:57,682   creating build/lib.linux-armv7l-3.9
2021-07-15T04:30:57,683   creating build/lib.linux-armv7l-3.9/pygom
2021-07-15T04:30:57,684   copying pygom/__init__.py -> build/lib.linux-armv7l-3.9/pygom
2021-07-15T04:30:57,687   creating build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,688   copying pygom/model/__init__.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,690   copying pygom/model/simulate.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,693   copying pygom/model/epi_analysis.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,695   copying pygom/model/_ode_composition.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,698   copying pygom/model/_model_errors.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,700   copying pygom/model/deterministic.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,704   copying pygom/model/transition.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,707   copying pygom/model/_model_verification.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,709   copying pygom/model/ode_variable.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,712   copying pygom/model/stochastic_simulation.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,715   copying pygom/model/base_ode_model.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,719   copying pygom/model/common_models.py -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,723   creating build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-15T04:30:57,724   copying pygom/model/ode_utils/__init__.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-15T04:30:57,728   copying pygom/model/ode_utils/plot_det.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-15T04:30:57,731   copying pygom/model/ode_utils/plot_stoc.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-15T04:30:57,733   copying pygom/model/ode_utils/compile_canary.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-15T04:30:57,736   copying pygom/model/ode_utils/checks_and_conversions.py -> build/lib.linux-armv7l-3.9/pygom/model/ode_utils
2021-07-15T04:30:57,739   creating build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,740   copying pygom/loss/__init__.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,743   copying pygom/loss/read_epijson.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,745   copying pygom/loss/loss_type.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,748   copying pygom/loss/base_loss.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,752   copying pygom/loss/get_init.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,754   copying pygom/loss/ode_loss.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,757   copying pygom/loss/confidence_interval.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,760   copying pygom/loss/epijson_loss.py -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,763   creating build/lib.linux-armv7l-3.9/pygom/utilR
2021-07-15T04:30:57,764   copying pygom/utilR/__init__.py -> build/lib.linux-armv7l-3.9/pygom/utilR
2021-07-15T04:30:57,766   copying pygom/utilR/distn.py -> build/lib.linux-armv7l-3.9/pygom/utilR
2021-07-15T04:30:57,769   running egg_info
2021-07-15T04:30:57,773   writing pygom.egg-info/PKG-INFO
2021-07-15T04:30:57,776   writing dependency_links to pygom.egg-info/dependency_links.txt
2021-07-15T04:30:57,778   writing requirements to pygom.egg-info/requires.txt
2021-07-15T04:30:57,780   writing top-level names to pygom.egg-info/top_level.txt
2021-07-15T04:30:57,823   reading manifest file 'pygom.egg-info/SOURCES.txt'
2021-07-15T04:30:57,845   reading manifest template 'MANIFEST.in'
2021-07-15T04:30:57,846   warning: no files found matching 'data/*.json'
2021-07-15T04:30:57,846   adding license file 'LICENSE.txt'
2021-07-15T04:30:57,853   writing manifest file 'pygom.egg-info/SOURCES.txt'
2021-07-15T04:30:57,858   creating build/lib.linux-armv7l-3.9/pygom/data
2021-07-15T04:30:57,859   copying pygom/data/eg1.json -> build/lib.linux-armv7l-3.9/pygom/data
2021-07-15T04:30:57,861   copying pygom/model/_tau_leap.c -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,891   copying pygom/model/_tau_leap.pyx -> build/lib.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,893   copying pygom/loss/.gitignore -> build/lib.linux-armv7l-3.9/pygom/loss
2021-07-15T04:30:57,898   running build_ext
2021-07-15T04:30:57,959   skipping 'pygom/model/_tau_leap.c' Cython extension (up-to-date)
2021-07-15T04:30:57,960   building 'pygom.model._tau_leap' extension
2021-07-15T04:30:57,960   creating build/temp.linux-armv7l-3.9
2021-07-15T04:30:57,960   creating build/temp.linux-armv7l-3.9/pygom
2021-07-15T04:30:57,961   creating build/temp.linux-armv7l-3.9/pygom/model
2021-07-15T04:30:57,962   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pygom/model/_tau_leap.c -o build/temp.linux-armv7l-3.9/pygom/model/_tau_leap.o
2021-07-15T04:30:58,347   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-15T04:30:58,347                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-15T04:30:58,347                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-15T04:30:58,347                    from pygom/model/_tau_leap.c:598:
2021-07-15T04:30:58,347   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-15T04:30:58,348      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-15T04:30:58,348         |  ^~~~~~~
2021-07-15T04:30:58,759   pygom/model/_tau_leap.c: In function ‘__Pyx_ParseOptionalKeywords’:
2021-07-15T04:30:58,773   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,773   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,773         |                     ^
2021-07-15T04:30:58,773   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,773                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,774                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,774   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,774     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,774         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,789   pygom/model/_tau_leap.c:20221:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,789   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,789         |                     ^
2021-07-15T04:30:58,789   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,790                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,790                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,790   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-15T04:30:58,790     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-15T04:30:58,790         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,805   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,805   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,805         |                     ^
2021-07-15T04:30:58,805   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,805                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,805                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,806   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,806     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,806         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,821   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,821   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,821         |                     ^
2021-07-15T04:30:58,821   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,821                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,821                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,821   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,822     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,822         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,836   pygom/model/_tau_leap.c:20221:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,837   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,837         |                     ^
2021-07-15T04:30:58,837   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,837                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,837                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,837   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-15T04:30:58,837     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-15T04:30:58,837         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,852   pygom/model/_tau_leap.c:20221:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,852   20221 |                     (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,852         |                     ^
2021-07-15T04:30:58,853   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,853                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,853                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,853   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,853     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,853         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,871   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,871   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,871         |                         ^
2021-07-15T04:30:58,872   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,872                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,872                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,872   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,872     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,872         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,887   pygom/model/_tau_leap.c:20237:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,887   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,887         |                         ^
2021-07-15T04:30:58,887   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,887                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,887                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,888   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-15T04:30:58,888     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-15T04:30:58,888         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,903   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,903   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,903         |                         ^
2021-07-15T04:30:58,903   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,903                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,903                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,903   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,904     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,904         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,918   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,919   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,919         |                         ^
2021-07-15T04:30:58,919   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,919                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,919                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,919   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,919     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,919         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,934   pygom/model/_tau_leap.c:20237:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,934   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,934         |                         ^
2021-07-15T04:30:58,935   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,935                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,935                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,935   /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
2021-07-15T04:30:58,935     580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
2021-07-15T04:30:58,935         |                                             ^~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:58,950   pygom/model/_tau_leap.c:20237:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:58,950   20237 |                         (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
2021-07-15T04:30:58,950         |                         ^
2021-07-15T04:30:58,950   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:58,951                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:58,951                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:58,951   /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
2021-07-15T04:30:58,951     446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
2021-07-15T04:30:58,951         |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:30:59,294   pygom/model/_tau_leap.c: In function ‘__Pyx_decode_c_string’:
2021-07-15T04:30:59,309   pygom/model/_tau_leap.c:21943:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations]
2021-07-15T04:30:59,309   21943 |         return PyUnicode_FromUnicode(NULL, 0);
2021-07-15T04:30:59,309         |         ^~~~~~
2021-07-15T04:30:59,309   In file included from /usr/include/python3.9/unicodeobject.h:1026,
2021-07-15T04:30:59,309                    from /usr/include/python3.9/Python.h:97,
2021-07-15T04:30:59,310                    from pygom/model/_tau_leap.c:4:
2021-07-15T04:30:59,310   /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here
2021-07-15T04:30:59,310     551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode(
2021-07-15T04:30:59,310         |                                          ^~~~~~~~~~~~~~~~~~~~~
2021-07-15T04:31:07,704   pygom/model/_tau_leap.c: In function ‘__pyx_pf_5pygom_5model_9_tau_leap__cy_test_tau_leap_safety.constprop’:
2021-07-15T04:31:07,706   pygom/model/_tau_leap.c:2883:12: warning: ‘__pyx_v_new_cdf’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2021-07-15T04:31:07,707    2883 |         if (__pyx_t_5) {
2021-07-15T04:31:07,707         |            ^
2021-07-15T04:31:11,345   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pygom/model/_tau_leap.o -o build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.cpython-39-arm-linux-gnueabihf.so
2021-07-15T04:31:11,521   installing to build/bdist.linux-armv7l/wheel
2021-07-15T04:31:11,521   running install
2021-07-15T04:31:11,523   running install_lib
2021-07-15T04:31:11,528   creating build/bdist.linux-armv7l
2021-07-15T04:31:11,528   creating build/bdist.linux-armv7l/wheel
2021-07-15T04:31:11,530   creating build/bdist.linux-armv7l/wheel/pygom
2021-07-15T04:31:11,531   copying build/lib.linux-armv7l-3.9/pygom/__init__.py -> build/bdist.linux-armv7l/wheel/pygom
2021-07-15T04:31:11,534   creating build/bdist.linux-armv7l/wheel/pygom/data
2021-07-15T04:31:11,535   copying build/lib.linux-armv7l-3.9/pygom/data/eg1.json -> build/bdist.linux-armv7l/wheel/pygom/data
2021-07-15T04:31:11,538   creating build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,539   copying build/lib.linux-armv7l-3.9/pygom/loss/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,541   copying build/lib.linux-armv7l-3.9/pygom/loss/read_epijson.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,543   copying build/lib.linux-armv7l-3.9/pygom/loss/loss_type.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,545   copying build/lib.linux-armv7l-3.9/pygom/loss/base_loss.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,549   copying build/lib.linux-armv7l-3.9/pygom/loss/get_init.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,552   copying build/lib.linux-armv7l-3.9/pygom/loss/ode_loss.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,554   copying build/lib.linux-armv7l-3.9/pygom/loss/confidence_interval.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,557   copying build/lib.linux-armv7l-3.9/pygom/loss/epijson_loss.py -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,559   copying build/lib.linux-armv7l-3.9/pygom/loss/.gitignore -> build/bdist.linux-armv7l/wheel/pygom/loss
2021-07-15T04:31:11,561   creating build/bdist.linux-armv7l/wheel/pygom/utilR
2021-07-15T04:31:11,562   copying build/lib.linux-armv7l-3.9/pygom/utilR/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/utilR
2021-07-15T04:31:11,564   copying build/lib.linux-armv7l-3.9/pygom/utilR/distn.py -> build/bdist.linux-armv7l/wheel/pygom/utilR
2021-07-15T04:31:11,567   creating build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,568   copying build/lib.linux-armv7l-3.9/pygom/model/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,570   copying build/lib.linux-armv7l-3.9/pygom/model/simulate.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,574   copying build/lib.linux-armv7l-3.9/pygom/model/epi_analysis.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,576   copying build/lib.linux-armv7l-3.9/pygom/model/_ode_composition.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,579   copying build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,604   copying build/lib.linux-armv7l-3.9/pygom/model/_model_errors.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,606   copying build/lib.linux-armv7l-3.9/pygom/model/deterministic.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,610   copying build/lib.linux-armv7l-3.9/pygom/model/transition.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,613   creating build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-15T04:31:11,614   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/__init__.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-15T04:31:11,617   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/plot_det.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-15T04:31:11,619   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/plot_stoc.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-15T04:31:11,622   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/compile_canary.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-15T04:31:11,623   copying build/lib.linux-armv7l-3.9/pygom/model/ode_utils/checks_and_conversions.py -> build/bdist.linux-armv7l/wheel/pygom/model/ode_utils
2021-07-15T04:31:11,625   copying build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.c -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,649   copying build/lib.linux-armv7l-3.9/pygom/model/_model_verification.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,651   copying build/lib.linux-armv7l-3.9/pygom/model/ode_variable.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,653   copying build/lib.linux-armv7l-3.9/pygom/model/stochastic_simulation.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,656   copying build/lib.linux-armv7l-3.9/pygom/model/base_ode_model.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,659   copying build/lib.linux-armv7l-3.9/pygom/model/common_models.py -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,662   copying build/lib.linux-armv7l-3.9/pygom/model/_tau_leap.pyx -> build/bdist.linux-armv7l/wheel/pygom/model
2021-07-15T04:31:11,663   running install_egg_info
2021-07-15T04:31:11,669   Copying pygom.egg-info to build/bdist.linux-armv7l/wheel/pygom-0.1.5-py3.9.egg-info
2021-07-15T04:31:11,682   running install_scripts
2021-07-15T04:31:11,765   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2021-07-15T04:31:11,771   creating build/bdist.linux-armv7l/wheel/pygom-0.1.5.dist-info/WHEEL
2021-07-15T04:31:11,773   creating '/tmp/pip-wheel-lokjdyw8/pygom-0.1.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-15T04:31:11,776   adding 'pygom/__init__.py'
2021-07-15T04:31:11,778   adding 'pygom/data/eg1.json'
2021-07-15T04:31:11,780   adding 'pygom/loss/.gitignore'
2021-07-15T04:31:11,782   adding 'pygom/loss/__init__.py'
2021-07-15T04:31:11,789   adding 'pygom/loss/base_loss.py'
2021-07-15T04:31:11,794   adding 'pygom/loss/confidence_interval.py'
2021-07-15T04:31:11,795   adding 'pygom/loss/epijson_loss.py'
2021-07-15T04:31:11,797   adding 'pygom/loss/get_init.py'
2021-07-15T04:31:11,799   adding 'pygom/loss/loss_type.py'
2021-07-15T04:31:11,800   adding 'pygom/loss/ode_loss.py'
2021-07-15T04:31:11,802   adding 'pygom/loss/read_epijson.py'
2021-07-15T04:31:11,804   adding 'pygom/model/__init__.py'
2021-07-15T04:31:11,805   adding 'pygom/model/_model_errors.py'
2021-07-15T04:31:11,807   adding 'pygom/model/_model_verification.py'
2021-07-15T04:31:11,810   adding 'pygom/model/_ode_composition.py'
2021-07-15T04:31:11,889   adding 'pygom/model/_tau_leap.c'
2021-07-15T04:31:12,075   adding 'pygom/model/_tau_leap.cpython-39-arm-linux-gnueabihf.so'
2021-07-15T04:31:12,083   adding 'pygom/model/_tau_leap.pyx'
2021-07-15T04:31:12,088   adding 'pygom/model/base_ode_model.py'
2021-07-15T04:31:12,092   adding 'pygom/model/common_models.py'
2021-07-15T04:31:12,099   adding 'pygom/model/deterministic.py'
2021-07-15T04:31:12,101   adding 'pygom/model/epi_analysis.py'
2021-07-15T04:31:12,103   adding 'pygom/model/ode_variable.py'
2021-07-15T04:31:12,106   adding 'pygom/model/simulate.py'
2021-07-15T04:31:12,109   adding 'pygom/model/stochastic_simulation.py'
2021-07-15T04:31:12,111   adding 'pygom/model/transition.py'
2021-07-15T04:31:12,115   adding 'pygom/model/ode_utils/__init__.py'
2021-07-15T04:31:12,116   adding 'pygom/model/ode_utils/checks_and_conversions.py'
2021-07-15T04:31:12,118   adding 'pygom/model/ode_utils/compile_canary.py'
2021-07-15T04:31:12,120   adding 'pygom/model/ode_utils/plot_det.py'
2021-07-15T04:31:12,121   adding 'pygom/model/ode_utils/plot_stoc.py'
2021-07-15T04:31:12,123   adding 'pygom/utilR/__init__.py'
2021-07-15T04:31:12,125   adding 'pygom/utilR/distn.py'
2021-07-15T04:31:12,129   adding 'pygom-0.1.5.dist-info/LICENSE.txt'
2021-07-15T04:31:12,130   adding 'pygom-0.1.5.dist-info/METADATA'
2021-07-15T04:31:12,131   adding 'pygom-0.1.5.dist-info/WHEEL'
2021-07-15T04:31:12,132   adding 'pygom-0.1.5.dist-info/top_level.txt'
2021-07-15T04:31:12,134   adding 'pygom-0.1.5.dist-info/RECORD'
2021-07-15T04:31:12,144   removing build/bdist.linux-armv7l/wheel
2021-07-15T04:31:12,290   Building wheel for pygom (setup.py): finished with status 'done'
2021-07-15T04:31:12,299   Created wheel for pygom: filename=pygom-0.1.5-cp39-cp39-linux_armv7l.whl size=534315 sha256=3b7a4b2ea73256154d5f7c59f03faf33ec3bc794dc81b4db4b665655baac4854
2021-07-15T04:31:12,299   Stored in directory: /tmp/pip-ephem-wheel-cache-_m_5vidh/wheels/b4/d8/b6/dadbd0f7865525f2d1940df7f85b7fd5b23bd2d4ed8c8382f7
2021-07-15T04:31:12,310 Successfully built pygom
2021-07-15T04:31:12,328 Removed build tracker: '/tmp/pip-req-tracker-dhbgr5td'