2021-07-15T10:06:14,253 Created temporary directory: /tmp/pip-ephem-wheel-cache-f2ioiinr
2021-07-15T10:06:14,256 Created temporary directory: /tmp/pip-req-tracker-omr6j4o4
2021-07-15T10:06:14,256 Initialized build tracking at /tmp/pip-req-tracker-omr6j4o4
2021-07-15T10:06:14,256 Created build tracker: /tmp/pip-req-tracker-omr6j4o4
2021-07-15T10:06:14,257 Entered build tracker: /tmp/pip-req-tracker-omr6j4o4
2021-07-15T10:06:14,257 Created temporary directory: /tmp/pip-wheel-hnbgb3xy
2021-07-15T10:06:14,291 1 location(s) to search for versions of pyssa:
2021-07-15T10:06:14,291 * https://pypi.org/simple/pyssa/
2021-07-15T10:06:14,291 Fetching project page and analyzing links: https://pypi.org/simple/pyssa/
2021-07-15T10:06:14,292 Getting page https://pypi.org/simple/pyssa/
2021-07-15T10:06:14,293 Found index url https://pypi.org/simple
2021-07-15T10:06:14,486   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/33/43/4d28b4ce5a85131b22bedd9886a8e790abee71c3f8f83367df09012e9d76/pyssa-0.1.0-py3.6-win-amd64.egg#sha256=5ed390509472d2dca456466d2f8532bfbde63193ba0342bd87f8b5504a1559b4 (from https://pypi.org/simple/pyssa/)
2021-07-15T10:06:14,486   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2d/7e/aad4420b1bceab821ecad275c1df0d7900fb80a53dee74b3cdafa3a0a8c2/pyssa-0.1.0-py3.6.egg#sha256=6920fc4955b2f2dcd94f01e5ba01ff8335b638ae04ac1da772029d625f78f21f (from https://pypi.org/simple/pyssa/)
2021-07-15T10:06:14,503   Found link https://files.pythonhosted.org/packages/fb/f4/ad0c19149ae81e0eec49e4cedde0954ed5ade38533b271f0e73b2c82b1c3/pyssa-0.5.4-py2.py3-none-any.whl#sha256=0b42bd27a63cdfa1f011680624090d30aab0381b3efa2b66c8f41c270c85d102 (from https://pypi.org/simple/pyssa/), version: 0.5.4
2021-07-15T10:06:14,504   Found link https://files.pythonhosted.org/packages/0e/78/ac806a65ea35095f214f4589315583a1df1b9cd24da667d50969c40a6de7/pyssa-0.5.4.tar.gz#sha256=bc35deac1fdb638f185040517a917fa89643a300ee6e62c9fbd038ef6bc64877 (from https://pypi.org/simple/pyssa/), version: 0.5.4
2021-07-15T10:06:14,504   Found link https://files.pythonhosted.org/packages/29/af/874de26f959f8cf87ca1002cff22b8352dc11b74d738cf7acc5a89e89994/pyssa-0.6.0.tar.gz#sha256=4e4d19db4d48f645616a40afbcc4be23ca95c0436a0a9a9d200c123c958bcf95 (from https://pypi.org/simple/pyssa/), version: 0.6.0
2021-07-15T10:06:14,504   Found link https://files.pythonhosted.org/packages/42/cc/5b6773993b98d146c6929aeb2131d966f452c4186031bd71ed6682944f23/pyssa-0.7.0.tar.gz#sha256=350bc31226a9b94d83de57b86a1762a9177a718f115f9c9f4c67a551c4f8582e (from https://pypi.org/simple/pyssa/), version: 0.7.0
2021-07-15T10:06:14,505   Found link https://files.pythonhosted.org/packages/5d/3d/fab7d8c46b52f085af7426c1a62b5234a8011b37edc821b7b1bba3cee408/pyssa-0.7.1.tar.gz#sha256=f7fcbeb6e10a6dfb64d11238e60e5a92895ea0671d77d6678938bbbb8dce2a73 (from https://pypi.org/simple/pyssa/), version: 0.7.1
2021-07-15T10:06:14,505   Found link https://files.pythonhosted.org/packages/82/09/7b74daede528a256545a1a227bc83b8030fe0b966033ba9482f16488cb13/pyssa-0.8.0.tar.gz#sha256=5b27b379e8c87a66971132c334795f7683cdbc887dc65025a36035d87c3b159c (from https://pypi.org/simple/pyssa/), version: 0.8.0
2021-07-15T10:06:14,505   Found link https://files.pythonhosted.org/packages/49/b5/b221dcecf3838186c81d833d8ea760d073ef92d9347109e018508b2ba1f1/pyssa-0.8.1.tar.gz#sha256=e6bbeb35b213a3fd7046adea46011019be3aad8f122e6fd34ec0e79c644ab9c9 (from https://pypi.org/simple/pyssa/), version: 0.8.1
2021-07-15T10:06:14,505   Found link https://files.pythonhosted.org/packages/91/d2/35604e2fc272e7d2e6fc074f0ca44dcd5fa8b9918bcc5e17db24316785e7/pyssa-0.8.2.tar.gz#sha256=9c628cac789c92dede8ba6f6285dd7154d0b233fc7288f0be20cd555fe2df592 (from https://pypi.org/simple/pyssa/), version: 0.8.2
2021-07-15T10:06:14,506   Found link https://files.pythonhosted.org/packages/6c/df/71a6c566523508320be4aa43507765e421bd37e46a8d9733aa14fc39bfb0/pyssa-0.9.0.tar.gz#sha256=2a7708943564740b8a74576cfd6a25fad07338c0226432d0d7498531367627a8 (from https://pypi.org/simple/pyssa/), version: 0.9.0
2021-07-15T10:06:14,506   Found link https://files.pythonhosted.org/packages/4d/e0/9df44bb59f91db0308ade3fd8d1f10ba0bee56bd158c76dbebd541f3d4a0/pyssa-0.9.1.tar.gz#sha256=abc7af012110ac372bb503480a23ea36e56ef949de1a85d9f6ce0ff2868f9de9 (from https://pypi.org/simple/pyssa/), version: 0.9.1
2021-07-15T10:06:14,506 Skipping link: not a file: https://pypi.org/simple/pyssa/
2021-07-15T10:06:14,508 Given no hashes to check 1 links for project 'pyssa': discarding no candidates
2021-07-15T10:06:14,527 Collecting pyssa==0.9.0
2021-07-15T10:06:14,529   Created temporary directory: /tmp/pip-unpack-6s0oqew4
2021-07-15T10:06:15,236   Downloading pyssa-0.9.0.tar.gz (784 kB)
2021-07-15T10:06:15,676   Added pyssa==0.9.0 from https://files.pythonhosted.org/packages/6c/df/71a6c566523508320be4aa43507765e421bd37e46a8d9733aa14fc39bfb0/pyssa-0.9.0.tar.gz#sha256=2a7708943564740b8a74576cfd6a25fad07338c0226432d0d7498531367627a8 to build tracker '/tmp/pip-req-tracker-omr6j4o4'
2021-07-15T10:06:15,677     Running setup.py (path:/tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/setup.py) egg_info for package pyssa
2021-07-15T10:06:15,678     Created temporary directory: /tmp/pip-pip-egg-info-9c8jutql
2021-07-15T10:06:15,678     Running command python setup.py egg_info
2021-07-15T10:06:17,976     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/pyssa/algorithms/direct.pyx
2021-07-15T10:06:17,977       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-15T10:06:24,710     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/pyssa/algorithms/tau_adaptive.pyx
2021-07-15T10:06:24,710       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-15T10:06:29,064     warning: pyssa/algorithms/tau_adaptive.pyx:118:20: Index should be typed for more efficient access
2021-07-15T10:06:32,460     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/pyssa/algorithms/tau_leaping.pyx
2021-07-15T10:06:32,460       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-15T10:06:39,328     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/pyssa/utils.pxd
2021-07-15T10:06:39,328       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-15T10:06:45,991     Compiling pyssa/algorithms/direct.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-15T10:06:45,991     Compiling pyssa/algorithms/tau_leaping.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-15T10:06:45,991     Compiling pyssa/algorithms/tau_adaptive.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-15T10:06:45,992     Compiling pyssa/utils.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-15T10:06:45,992     [1/4] Cythonizing pyssa/algorithms/direct.pyx
2021-07-15T10:06:45,992     [2/4] Cythonizing pyssa/algorithms/tau_adaptive.pyx
2021-07-15T10:06:45,992     [3/4] Cythonizing pyssa/algorithms/tau_leaping.pyx
2021-07-15T10:06:45,992     [4/4] Cythonizing pyssa/utils.pyx
2021-07-15T10:06:46,247     running egg_info
2021-07-15T10:06:46,249     creating /tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info
2021-07-15T10:06:46,250     writing /tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/PKG-INFO
2021-07-15T10:06:46,253     writing dependency_links to /tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/dependency_links.txt
2021-07-15T10:06:46,255     writing requirements to /tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/requires.txt
2021-07-15T10:06:46,256     writing top-level names to /tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/top_level.txt
2021-07-15T10:06:46,257     writing manifest file '/tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/SOURCES.txt'
2021-07-15T10:06:46,458     reading manifest file '/tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/SOURCES.txt'
2021-07-15T10:06:46,461     reading manifest template 'MANIFEST.in'
2021-07-15T10:06:46,464     warning: no files found matching 'README.rst'
2021-07-15T10:06:46,480     warning: no previously-included files matching '__pycache__' found under directory '*'
2021-07-15T10:06:46,481     warning: no previously-included files matching '*.py[co]' found under directory '*'
2021-07-15T10:06:46,520     warning: no files found matching '*.jpg' under directory 'docs'
2021-07-15T10:06:46,541     warning: no files found matching '*.gif' under directory 'docs'
2021-07-15T10:06:46,554     adding license file 'LICENSE'
2021-07-15T10:06:46,555     adding license file 'AUTHORS.rst'
2021-07-15T10:06:46,559     writing manifest file '/tmp/pip-pip-egg-info-9c8jutql/pyssa.egg-info/SOURCES.txt'
2021-07-15T10:06:46,977   Source in /tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6 has version 0.9.0, which satisfies requirement pyssa==0.9.0 from https://files.pythonhosted.org/packages/6c/df/71a6c566523508320be4aa43507765e421bd37e46a8d9733aa14fc39bfb0/pyssa-0.9.0.tar.gz#sha256=2a7708943564740b8a74576cfd6a25fad07338c0226432d0d7498531367627a8
2021-07-15T10:06:46,978   Removed pyssa==0.9.0 from https://files.pythonhosted.org/packages/6c/df/71a6c566523508320be4aa43507765e421bd37e46a8d9733aa14fc39bfb0/pyssa-0.9.0.tar.gz#sha256=2a7708943564740b8a74576cfd6a25fad07338c0226432d0d7498531367627a8 from build tracker '/tmp/pip-req-tracker-omr6j4o4'
2021-07-15T10:06:46,983 Created temporary directory: /tmp/pip-unpack-vo4hntpq
2021-07-15T10:06:46,983 Building wheels for collected packages: pyssa
2021-07-15T10:06:46,987   Created temporary directory: /tmp/pip-wheel-gl4v9l53
2021-07-15T10:06:46,987   Building wheel for pyssa (setup.py): started
2021-07-15T10:06:46,988   Destination directory: /tmp/pip-wheel-gl4v9l53
2021-07-15T10:06:46,988   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-hnbgb3xy/pyssa_acee61fc963947029fd4f68b1fa7c9f6/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-gl4v9l53
2021-07-15T10:06:49,275   running bdist_wheel
2021-07-15T10:06:49,281   running build
2021-07-15T10:06:49,282   running build_py
2021-07-15T10:06:49,414   creating build
2021-07-15T10:06:49,414   creating build/lib.linux-armv7l-3.9
2021-07-15T10:06:49,414   creating build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,415   copying pyssa/__init__.py -> build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,417   copying pyssa/simulation.py -> build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,420   copying pyssa/results.py -> build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,423   creating build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,423   copying pyssa/algorithms/__init__.py -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,425   running egg_info
2021-07-15T10:06:49,440   writing pyssa.egg-info/PKG-INFO
2021-07-15T10:06:49,442   writing dependency_links to pyssa.egg-info/dependency_links.txt
2021-07-15T10:06:49,444   writing requirements to pyssa.egg-info/requires.txt
2021-07-15T10:06:49,445   writing top-level names to pyssa.egg-info/top_level.txt
2021-07-15T10:06:49,488   reading manifest file 'pyssa.egg-info/SOURCES.txt'
2021-07-15T10:06:49,492   reading manifest template 'MANIFEST.in'
2021-07-15T10:06:49,493   warning: no files found matching 'README.rst'
2021-07-15T10:06:49,506   warning: no previously-included files matching '__pycache__' found under directory '*'
2021-07-15T10:06:49,507   warning: no previously-included files matching '*.py[co]' found under directory '*'
2021-07-15T10:06:49,542   warning: no files found matching '*.jpg' under directory 'docs'
2021-07-15T10:06:49,562   warning: no files found matching '*.gif' under directory 'docs'
2021-07-15T10:06:49,576   adding license file 'LICENSE'
2021-07-15T10:06:49,577   adding license file 'AUTHORS.rst'
2021-07-15T10:06:49,582   writing manifest file 'pyssa.egg-info/SOURCES.txt'
2021-07-15T10:06:49,586   copying pyssa/utils.c -> build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,617   copying pyssa/utils.pxd -> build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,618   copying pyssa/utils.pyx -> build/lib.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,621   copying pyssa/algorithms/direct.c -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,647   copying pyssa/algorithms/direct.pyx -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,649   copying pyssa/algorithms/tau_adaptive.c -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,675   copying pyssa/algorithms/tau_adaptive.pyx -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,678   copying pyssa/algorithms/tau_leaping.c -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,704   copying pyssa/algorithms/tau_leaping.pyx -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,707   running build_ext
2021-07-15T10:06:49,712   building 'pyssa.algorithms.direct' extension
2021-07-15T10:06:49,712   creating build/temp.linux-armv7l-3.9
2021-07-15T10:06:49,713   creating build/temp.linux-armv7l-3.9/pyssa
2021-07-15T10:06:49,713   creating build/temp.linux-armv7l-3.9/pyssa/algorithms
2021-07-15T10:06:49,714   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/algorithms/direct.c -o build/temp.linux-armv7l-3.9/pyssa/algorithms/direct.o
2021-07-15T10:06:50,122   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-15T10:06:50,123                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-15T10:06:50,123                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-15T10:06:50,123                    from pyssa/algorithms/direct.c:640:
2021-07-15T10:06:50,123   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-15T10:06:50,123      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-15T10:06:50,123         |  ^~~~~~~
2021-07-15T10:06:51,306   pyssa/algorithms/direct.c:14480:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,306   14480 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-15T10:06:51,306         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,314   pyssa/algorithms/direct.c:14422:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,314   14422 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:06:51,314         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,321   pyssa/algorithms/direct.c:11577:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,321   11577 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-15T10:06:51,321         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,327   pyssa/algorithms/direct.c:11519:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,327   11519 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:06:51,328         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,334   pyssa/algorithms/direct.c:11425:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,334   11425 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-15T10:06:51,334         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,340   pyssa/algorithms/direct.c:11330:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,340   11330 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-15T10:06:51,341         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,347   pyssa/algorithms/direct.c:11253:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,347   11253 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-15T10:06:51,347         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,353   pyssa/algorithms/direct.c:11176:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,353   11176 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-15T10:06:51,353         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,357   pyssa/algorithms/direct.c:7303:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,357    7303 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-15T10:06:51,357         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,361   pyssa/algorithms/direct.c:7067:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,361    7067 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:06:51,361         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,365   pyssa/algorithms/direct.c:6689:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,365    6689 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-15T10:06:51,365         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:06:51,368   pyssa/algorithms/direct.c:6631:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:06:51,369    6631 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:06:51,369         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:04,731   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/algorithms/direct.o -o build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.cpython-39-arm-linux-gnueabihf.so
2021-07-15T10:07:04,909   building 'pyssa.algorithms.tau_leaping' extension
2021-07-15T10:07:04,910   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/algorithms/tau_leaping.c -o build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.o
2021-07-15T10:07:05,293   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-15T10:07:05,293                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-15T10:07:05,293                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-15T10:07:05,294                    from pyssa/algorithms/tau_leaping.c:640:
2021-07-15T10:07:05,294   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-15T10:07:05,294      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-15T10:07:05,294         |  ^~~~~~~
2021-07-15T10:07:06,506   pyssa/algorithms/tau_leaping.c:14568:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,506   14568 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:06,506         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,515   pyssa/algorithms/tau_leaping.c:14510:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,515   14510 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:06,515         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,522   pyssa/algorithms/tau_leaping.c:11665:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,522   11665 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:06,522         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,529   pyssa/algorithms/tau_leaping.c:11607:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,529   11607 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:06,529         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,536   pyssa/algorithms/tau_leaping.c:11513:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,536   11513 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-15T10:07:06,536         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,543   pyssa/algorithms/tau_leaping.c:11418:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,543   11418 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-15T10:07:06,543         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,550   pyssa/algorithms/tau_leaping.c:11341:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,550   11341 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-15T10:07:06,550         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,557   pyssa/algorithms/tau_leaping.c:11264:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,557   11264 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-15T10:07:06,557         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,562   pyssa/algorithms/tau_leaping.c:7391:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,562    7391 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:06,562         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,566   pyssa/algorithms/tau_leaping.c:7155:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,566    7155 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:06,566         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,570   pyssa/algorithms/tau_leaping.c:6777:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,570    6777 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:06,571         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:06,574   pyssa/algorithms/tau_leaping.c:6719:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:06,575    6719 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:06,575         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:20,069   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.o -o build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.cpython-39-arm-linux-gnueabihf.so
2021-07-15T10:07:20,246   building 'pyssa.algorithms.tau_adaptive' extension
2021-07-15T10:07:20,246   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/algorithms/tau_adaptive.c -o build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.o
2021-07-15T10:07:20,627   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-15T10:07:20,628                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-15T10:07:20,628                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-15T10:07:20,628                    from pyssa/algorithms/tau_adaptive.c:640:
2021-07-15T10:07:20,628   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-15T10:07:20,628      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-15T10:07:20,629         |  ^~~~~~~
2021-07-15T10:07:22,476   pyssa/algorithms/tau_adaptive.c:19810:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,476   19810 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:22,476         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,488   pyssa/algorithms/tau_adaptive.c:19752:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,488   19752 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:22,488         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,497   pyssa/algorithms/tau_adaptive.c:16907:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,498   16907 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:22,498         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,507   pyssa/algorithms/tau_adaptive.c:16849:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,508   16849 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:22,508         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,517   pyssa/algorithms/tau_adaptive.c:16755:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,518   16755 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-15T10:07:22,518         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,527   pyssa/algorithms/tau_adaptive.c:16660:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,527   16660 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-15T10:07:22,527         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,537   pyssa/algorithms/tau_adaptive.c:16583:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,537   16583 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-15T10:07:22,537         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,547   pyssa/algorithms/tau_adaptive.c:16506:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,547   16506 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-15T10:07:22,547         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,554   pyssa/algorithms/tau_adaptive.c:12633:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,554   12633 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:22,554         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,561   pyssa/algorithms/tau_adaptive.c:12397:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,562   12397 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:22,562         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,569   pyssa/algorithms/tau_adaptive.c:12019:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,569   12019 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:22,569         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:22,576   pyssa/algorithms/tau_adaptive.c:11961:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:22,576   11961 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:22,576         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:26,338   pyssa/algorithms/tau_adaptive.c: In function ‘__pyx_f_5pyssa_10algorithms_12tau_adaptive_step2_get_g’:
2021-07-15T10:07:26,341   pyssa/algorithms/tau_adaptive.c:4258:15: warning: ‘__pyx_v_g’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2021-07-15T10:07:26,341    4258 |   __pyx_t_5 = PyFloat_FromDouble(__pyx_v_g); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 92, __pyx_L1_error)
2021-07-15T10:07:26,341         |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:46,861   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.o -o build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.cpython-39-arm-linux-gnueabihf.so
2021-07-15T10:07:47,073   building 'pyssa.utils' extension
2021-07-15T10:07:47,073   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/utils.c -o build/temp.linux-armv7l-3.9/pyssa/utils.o
2021-07-15T10:07:47,453   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-15T10:07:47,453                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-15T10:07:47,454                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-15T10:07:47,454                    from pyssa/utils.c:640:
2021-07-15T10:07:47,454   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-15T10:07:47,454      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-15T10:07:47,454         |  ^~~~~~~
2021-07-15T10:07:48,612   pyssa/utils.c:14190:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,612   14190 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:48,612         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,620   pyssa/utils.c:14132:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,620   14132 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:48,620         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,626   pyssa/utils.c:11287:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,626   11287 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:48,626         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,632   pyssa/utils.c:11229:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,632   11229 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:48,633         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,638   pyssa/utils.c:11135:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,639   11135 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-15T10:07:48,639         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,645   pyssa/utils.c:11040:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,645   11040 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-15T10:07:48,645         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,651   pyssa/utils.c:10963:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,651   10963 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-15T10:07:48,651         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,657   pyssa/utils.c:10886:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,657   10886 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-15T10:07:48,657         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,661   pyssa/utils.c:7013:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,661    7013 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:48,661         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,664   pyssa/utils.c:6777:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,665    6777 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:48,665         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,668   pyssa/utils.c:6399:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,668    6399 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-15T10:07:48,668         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:07:48,671   pyssa/utils.c:6341:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-15T10:07:48,672    6341 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-15T10:07:48,672         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-15T10:08:00,932   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/utils.o -o build/lib.linux-armv7l-3.9/pyssa/utils.cpython-39-arm-linux-gnueabihf.so
2021-07-15T10:08:01,118   installing to build/bdist.linux-armv7l/wheel
2021-07-15T10:08:01,119   running install
2021-07-15T10:08:01,120   running install_lib
2021-07-15T10:08:01,125   creating build/bdist.linux-armv7l
2021-07-15T10:08:01,126   creating build/bdist.linux-armv7l/wheel
2021-07-15T10:08:01,128   creating build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,129   copying build/lib.linux-armv7l-3.9/pyssa/__init__.py -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,131   copying build/lib.linux-armv7l-3.9/pyssa/simulation.py -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,134   copying build/lib.linux-armv7l-3.9/pyssa/results.py -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,138   creating build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,139   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,141   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.pyx -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,144   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,187   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.pyx -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,189   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.c -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,217   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.c -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,241   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,266   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.pyx -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,268   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.c -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,300   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-15T10:08:01,323   copying build/lib.linux-armv7l-3.9/pyssa/utils.c -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,379   copying build/lib.linux-armv7l-3.9/pyssa/utils.pxd -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,383   copying build/lib.linux-armv7l-3.9/pyssa/utils.pyx -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,386   copying build/lib.linux-armv7l-3.9/pyssa/utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-15T10:08:01,419   running install_egg_info
2021-07-15T10:08:01,427   Copying pyssa.egg-info to build/bdist.linux-armv7l/wheel/pyssa-0.9.0-py3.9.egg-info
2021-07-15T10:08:01,443   running install_scripts
2021-07-15T10:08:01,486   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-15T10:08:01,487   adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
2021-07-15T10:08:01,493   creating build/bdist.linux-armv7l/wheel/pyssa-0.9.0.dist-info/WHEEL
2021-07-15T10:08:01,496   creating '/tmp/pip-wheel-gl4v9l53/pyssa-0.9.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-15T10:08:01,498   adding 'pyssa/__init__.py'
2021-07-15T10:08:01,500   adding 'pyssa/results.py'
2021-07-15T10:08:01,502   adding 'pyssa/simulation.py'
2021-07-15T10:08:01,581   adding 'pyssa/utils.c'
2021-07-15T10:08:01,777   adding 'pyssa/utils.cpython-39-arm-linux-gnueabihf.so'
2021-07-15T10:08:01,785   adding 'pyssa/utils.pxd'
2021-07-15T10:08:01,787   adding 'pyssa/utils.pyx'
2021-07-15T10:08:01,789   adding 'pyssa/algorithms/__init__.py'
2021-07-15T10:08:01,864   adding 'pyssa/algorithms/direct.c'
2021-07-15T10:08:02,081   adding 'pyssa/algorithms/direct.cpython-39-arm-linux-gnueabihf.so'
2021-07-15T10:08:02,091   adding 'pyssa/algorithms/direct.pyx'
2021-07-15T10:08:02,191   adding 'pyssa/algorithms/tau_adaptive.c'
2021-07-15T10:08:02,505   adding 'pyssa/algorithms/tau_adaptive.cpython-39-arm-linux-gnueabihf.so'
2021-07-15T10:08:02,519   adding 'pyssa/algorithms/tau_adaptive.pyx'
2021-07-15T10:08:02,595   adding 'pyssa/algorithms/tau_leaping.c'
2021-07-15T10:08:02,801   adding 'pyssa/algorithms/tau_leaping.cpython-39-arm-linux-gnueabihf.so'
2021-07-15T10:08:02,810   adding 'pyssa/algorithms/tau_leaping.pyx'
2021-07-15T10:08:02,813   adding 'pyssa-0.9.0.dist-info/AUTHORS.rst'
2021-07-15T10:08:02,814   adding 'pyssa-0.9.0.dist-info/LICENSE'
2021-07-15T10:08:02,815   adding 'pyssa-0.9.0.dist-info/METADATA'
2021-07-15T10:08:02,816   adding 'pyssa-0.9.0.dist-info/WHEEL'
2021-07-15T10:08:02,817   adding 'pyssa-0.9.0.dist-info/top_level.txt'
2021-07-15T10:08:02,817   adding 'pyssa-0.9.0.dist-info/RECORD'
2021-07-15T10:08:02,849   removing build/bdist.linux-armv7l/wheel
2021-07-15T10:08:03,008   Building wheel for pyssa (setup.py): finished with status 'done'
2021-07-15T10:08:03,039   Created wheel for pyssa: filename=pyssa-0.9.0-cp39-cp39-linux_armv7l.whl size=2156433 sha256=7e88ac122c2d7f1d1e753823ce0cac8fcdf8a2efdb7d42c4d076dc3324505463
2021-07-15T10:08:03,039   Stored in directory: /tmp/pip-ephem-wheel-cache-f2ioiinr/wheels/e1/ed/6a/3d5d770af02f70659e0f89b120e29e7006bab681903e5291bd
2021-07-15T10:08:03,050 Successfully built pyssa
2021-07-15T10:08:03,122 Removed build tracker: '/tmp/pip-req-tracker-omr6j4o4'