2021-07-15T12:52:07,097 Created temporary directory: /tmp/pip-ephem-wheel-cache-2spiyv3r
2021-07-15T12:52:07,100 Created temporary directory: /tmp/pip-req-tracker-d14issv3
2021-07-15T12:52:07,100 Initialized build tracking at /tmp/pip-req-tracker-d14issv3
2021-07-15T12:52:07,101 Created build tracker: /tmp/pip-req-tracker-d14issv3
2021-07-15T12:52:07,101 Entered build tracker: /tmp/pip-req-tracker-d14issv3
2021-07-15T12:52:07,101 Created temporary directory: /tmp/pip-wheel-hhphyzaq
2021-07-15T12:52:07,130 1 location(s) to search for versions of teca:
2021-07-15T12:52:07,130 * https://pypi.org/simple/teca/
2021-07-15T12:52:07,131 Fetching project page and analyzing links: https://pypi.org/simple/teca/
2021-07-15T12:52:07,131 Getting page https://pypi.org/simple/teca/
2021-07-15T12:52:07,133 Found index url https://pypi.org/simple
2021-07-15T12:52:07,311   Found link https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 (from https://pypi.org/simple/teca/), version: 2.2.1
2021-07-15T12:52:07,311   Found link https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e (from https://pypi.org/simple/teca/), version: 2.2.2
2021-07-15T12:52:07,312   Found link https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b (from https://pypi.org/simple/teca/), version: 3.0.0
2021-07-15T12:52:07,312   Found link https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 (from https://pypi.org/simple/teca/), version: 4.0.0
2021-07-15T12:52:07,312   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/70/4b/3ecb17552872c808d9b3f16d428780dae6a6fbb1c3dfdf1fa7af11141f2c/teca-4.1.0-py3.9-linux-x86_64.egg#sha256=3cf2bc49c8b6feea1450fb17e9c9a4f23cce8cdcf16d12148c9e9ee753c12725 (from https://pypi.org/simple/teca/)
2021-07-15T12:52:07,312   Found link https://files.pythonhosted.org/packages/5f/83/21a8fdb68f6211299f8154270d1e8dbac541f1fde15c15dde0c7cb46e143/teca-4.1.0.tar.gz#sha256=170d8f9f8a38e196597c37c67882e85fdf19e53729cd3bbf27be65ac9d3132e8 (from https://pypi.org/simple/teca/), version: 4.1.0
2021-07-15T12:52:07,313 Skipping link: not a file: https://pypi.org/simple/teca/
2021-07-15T12:52:07,334 Given no hashes to check 1 links for project 'teca': discarding no candidates
2021-07-15T12:52:07,353 Collecting teca==3.0.0
2021-07-15T12:52:07,354   Created temporary directory: /tmp/pip-unpack-2aicdf5x
2021-07-15T12:52:07,710   Downloading teca-3.0.0.tar.gz (447 kB)
2021-07-15T12:52:08,681   Added teca==3.0.0 from https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b to build tracker '/tmp/pip-req-tracker-d14issv3'
2021-07-15T12:52:08,682     Running setup.py (path:/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py) egg_info for package teca
2021-07-15T12:52:08,683     Created temporary directory: /tmp/pip-pip-egg-info-e680sdk8
2021-07-15T12:52:08,683     Running command python setup.py egg_info
2021-07-15T12:52:10,061     running egg_info
2021-07-15T12:52:10,064     creating /tmp/pip-pip-egg-info-e680sdk8/teca.egg-info
2021-07-15T12:52:10,065     writing /tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/PKG-INFO
2021-07-15T12:52:10,068     writing dependency_links to /tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/dependency_links.txt
2021-07-15T12:52:10,070     writing requirements to /tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/requires.txt
2021-07-15T12:52:10,072     writing top-level names to /tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/top_level.txt
2021-07-15T12:52:10,074     writing manifest file '/tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/SOURCES.txt'
2021-07-15T12:52:10,114     reading manifest file '/tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/SOURCES.txt'
2021-07-15T12:52:10,117     reading manifest template 'MANIFEST.in'
2021-07-15T12:52:10,307     warning: no previously-included files matching '*.pdf' found anywhere in distribution
2021-07-15T12:52:10,309     warning: no previously-included files matching '*.sw?' found anywhere in distribution
2021-07-15T12:52:10,309     adding license file 'LICENSE.md'
2021-07-15T12:52:10,329     writing manifest file '/tmp/pip-pip-egg-info-e680sdk8/teca.egg-info/SOURCES.txt'
2021-07-15T12:52:10,410   Source in /tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64 has version 3.0.0, which satisfies requirement teca==3.0.0 from https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b
2021-07-15T12:52:10,411   Removed teca==3.0.0 from https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b from build tracker '/tmp/pip-req-tracker-d14issv3'
2021-07-15T12:52:10,415 Created temporary directory: /tmp/pip-unpack-w53hvro3
2021-07-15T12:52:10,415 Building wheels for collected packages: teca
2021-07-15T12:52:10,419   Created temporary directory: /tmp/pip-wheel-v1uob7ul
2021-07-15T12:52:10,420   Building wheel for teca (setup.py): started
2021-07-15T12:52:10,420   Destination directory: /tmp/pip-wheel-v1uob7ul
2021-07-15T12:52:10,420   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-v1uob7ul
2021-07-15T12:52:11,778   running bdist_wheel
2021-07-15T12:52:11,784   running build
2021-07-15T12:52:11,784   running build_ext
2021-07-15T12:52:12,201   -- The C compiler identification is GNU 10.2.1
2021-07-15T12:52:12,526   -- The CXX compiler identification is GNU 10.2.1
2021-07-15T12:52:12,932   -- The Fortran compiler identification is GNU 10.2.1
2021-07-15T12:52:13,029   -- Detecting C compiler ABI info
2021-07-15T12:52:13,436   -- Detecting C compiler ABI info - done
2021-07-15T12:52:13,492   -- Check for working C compiler: /usr/bin/cc - skipped
2021-07-15T12:52:13,494   -- Detecting C compile features
2021-07-15T12:52:13,496   -- Detecting C compile features - done
2021-07-15T12:52:13,516   -- Detecting CXX compiler ABI info
2021-07-15T12:52:13,980   -- Detecting CXX compiler ABI info - done
2021-07-15T12:52:14,037   -- Check for working CXX compiler: /usr/bin/c++ - skipped
2021-07-15T12:52:14,038   -- Detecting CXX compile features
2021-07-15T12:52:14,041   -- Detecting CXX compile features - done
2021-07-15T12:52:14,078   -- Detecting Fortran compiler ABI info
2021-07-15T12:52:14,555   -- Detecting Fortran compiler ABI info - done
2021-07-15T12:52:14,613   -- Check for working Fortran compiler: /usr/bin/gfortran - skipped
2021-07-15T12:52:14,614   -- Checking whether /usr/bin/gfortran supports Fortran 90
2021-07-15T12:52:15,093   -- Checking whether /usr/bin/gfortran supports Fortran 90 - yes
2021-07-15T12:52:15,101   -- Configuring a Release build
2021-07-15T12:52:15,101   -- Check for c++ regex support
2021-07-15T12:52:23,615   -- Check for c++ regex support -- enabled
2021-07-15T12:52:24,434   -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1")
2021-07-15T12:52:28,345   -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1")
2021-07-15T12:52:33,492   -- Found MPI_Fortran: /usr/lib/arm-linux-gnueabihf/libmpi_usempif08.so (found version "3.1")
2021-07-15T12:52:33,495   -- Found MPI: TRUE (found version "3.1")
2021-07-15T12:52:33,498   -- MPI features -- enabled
2021-07-15T12:52:33,522   -- Could NOT find NetCDF (missing: NETCDF_LIBRARIES NETCDF_INCLUDE_DIRS)
2021-07-15T12:52:33,523   CMake Error at CMakeLists.txt:118 (message):
2021-07-15T12:52:33,523     NetCDF features -- required but not found.  set NETCDF_DIR to enable.


2021-07-15T12:52:33,526   -- Configuring incomplete, errors occurred!
2021-07-15T12:52:33,527   See also "/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/build/temp.linux-armv7l-3.9/CMakeFiles/CMakeOutput.log".

2021-07-15T12:52:33,544   ================================================================
2021-07-15T12:52:33,544     An error ocured building TECA. This is usually a symptom
2021-07-15T12:52:33,544     of a missing dependency. The error messages above will indicate
2021-07-15T12:52:33,545     which package is missing. Install the development package for
2021-07-15T12:52:33,545     the missing dependency using your system's package manager
2021-07-15T12:52:33,545   ================================================================

2021-07-15T12:52:33,545   Traceback (most recent call last):
2021-07-15T12:52:33,545     File "<string>", line 1, in <module>
2021-07-15T12:52:33,546     File "/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py", line 100, in <module>
2021-07-15T12:52:33,546       setup(name='teca',
2021-07-15T12:52:33,546     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-07-15T12:52:33,547       return distutils.core.setup(**attrs)
2021-07-15T12:52:33,547     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-07-15T12:52:33,547       dist.run_commands()
2021-07-15T12:52:33,547     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-07-15T12:52:33,548       self.run_command(cmd)
2021-07-15T12:52:33,548     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-15T12:52:33,549       cmd_obj.run()
2021-07-15T12:52:33,550     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-07-15T12:52:33,550       self.run_command('build')
2021-07-15T12:52:33,550     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-15T12:52:33,551       self.distribution.run_command(command)
2021-07-15T12:52:33,551     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-15T12:52:33,552       cmd_obj.run()
2021-07-15T12:52:33,552     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-07-15T12:52:33,552       self.run_command(cmd_name)
2021-07-15T12:52:33,552     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-15T12:52:33,553       self.distribution.run_command(command)
2021-07-15T12:52:33,553     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-15T12:52:33,554       cmd_obj.run()
2021-07-15T12:52:33,554     File "/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py", line 34, in run
2021-07-15T12:52:33,554       self.build_extension(ext)
2021-07-15T12:52:33,554     File "/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py", line 75, in build_extension
2021-07-15T12:52:33,555       subprocess.check_call(['cmake', ext.sourcedir] + cmake_args, cwd=self.build_temp)
2021-07-15T12:52:33,555     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-07-15T12:52:33,555       raise CalledProcessError(retcode, cmd)
2021-07-15T12:52:33,556   subprocess.CalledProcessError: Command '['cmake', '/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64', '-DCMAKE_INSTALL_PREFIX=/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/build/lib.linux-armv7l-3.9/teca', '-DLIB_PREFIX=.', '-DREQUIRE_PYTHON=TRUE', '-DREQUIRE_MPI=TRUE', '-DREQUIRE_UDUNITS=TRUE', '-DREQUIRE_NETCDF=TRUE', '-DREQUIRE_BOOST=TRUE', '-DTECA_PYTHON_VERSION=3', '-DTECA_VERSION=3.0.0(PyPi)', '-DCMAKE_BUILD_TYPE=Release']' returned non-zero exit status 1.
2021-07-15T12:52:33,634   Building wheel for teca (setup.py): finished with status 'error'
2021-07-15T12:52:33,635   ERROR: Failed building wheel for teca
2021-07-15T12:52:33,636   Running setup.py clean for teca
2021-07-15T12:52:33,636   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-hhphyzaq/teca_350d968288af4d0b97929113e8536a64/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-15T12:52:35,037   running clean
2021-07-15T12:52:35,040   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-15T12:52:35,055   'build/lib.linux-armv7l-3.9' does not exist -- can't clean it
2021-07-15T12:52:35,055   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-15T12:52:35,055   'build/scripts-3.9' does not exist -- can't clean it
2021-07-15T12:52:35,056   removing 'build'
2021-07-15T12:52:35,127 Failed to build teca
2021-07-15T12:52:35,127 ERROR: Failed to build one or more wheels
2021-07-15T12:52:35,128 Exception information:
2021-07-15T12:52:35,128 Traceback (most recent call last):
2021-07-15T12:52:35,128   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-15T12:52:35,128     status = self.run(options, args)
2021-07-15T12:52:35,128   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-15T12:52:35,128     return func(self, options, args)
2021-07-15T12:52:35,128   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-15T12:52:35,128     raise CommandError(
2021-07-15T12:52:35,128 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-15T12:52:35,130 Removed build tracker: '/tmp/pip-req-tracker-d14issv3'