2021-07-15T16:14:20,995 Created temporary directory: /tmp/pip-ephem-wheel-cache-r1328tib 2021-07-15T16:14:20,998 Created temporary directory: /tmp/pip-req-tracker-ldpb831k 2021-07-15T16:14:20,998 Initialized build tracking at /tmp/pip-req-tracker-ldpb831k 2021-07-15T16:14:20,998 Created build tracker: /tmp/pip-req-tracker-ldpb831k 2021-07-15T16:14:20,999 Entered build tracker: /tmp/pip-req-tracker-ldpb831k 2021-07-15T16:14:20,999 Created temporary directory: /tmp/pip-wheel-ytvbu3c2 2021-07-15T16:14:21,030 1 location(s) to search for versions of bx-python: 2021-07-15T16:14:21,030 * https://pypi.org/simple/bx-python/ 2021-07-15T16:14:21,030 Fetching project page and analyzing links: https://pypi.org/simple/bx-python/ 2021-07-15T16:14:21,031 Getting page https://pypi.org/simple/bx-python/ 2021-07-15T16:14:21,032 Found index url https://pypi.org/simple 2021-07-15T16:14:21,270 Found link https://files.pythonhosted.org/packages/ad/17/2f1c2fd7777a6fe0b3ffd8c45172a1462a9c2b0bac9c587739a7f8ef06d4/bx-python-0.6.0.tar.gz#sha256=bf2dbfcca0df7762d69a97ceabb696bbbd21650a17d6ef1447b396e6d9d99910 (from https://pypi.org/simple/bx-python/), version: 0.6.0 2021-07-15T16:14:21,270 Found link https://files.pythonhosted.org/packages/7b/8d/45cb4a291802a40fab711c55bd51904161a3074a03c9600c2dac7c16ed88/bx-python-0.7.1.tar.gz#sha256=9ff7b5354de03c463da6d245d3256a41966e718a16f4021b7f8d4861305c9ea1 (from https://pypi.org/simple/bx-python/), version: 0.7.1 2021-07-15T16:14:21,270 Found link https://files.pythonhosted.org/packages/9d/17/57c5925e099d7a61cbfdb41fc9acbfca404b83730a1af534e2bcddd23289/bx-python-0.7.2.tar.gz#sha256=b083b2c87807bbfa5b11196754768147ca5bb15001cb0dd76ef217065b4ca451 (from https://pypi.org/simple/bx-python/), version: 0.7.2 2021-07-15T16:14:21,271 Found link https://files.pythonhosted.org/packages/55/db/fa76af59a03c88ad80494fc0df2948740bbd58cd3b3ed5c31319624687cc/bx-python-0.7.3.tar.gz#sha256=518895e2dca313d7634c5cf48190b4020a463d6aa6adb42a261630bbd7e0e297 (from https://pypi.org/simple/bx-python/), version: 0.7.3 2021-07-15T16:14:21,271 Found link https://files.pythonhosted.org/packages/74/3e/f19be7f3fb6c6f7d4932050e3dfb1634354c6e896e27d2301ba4df9145e0/bx-python-0.8.1.tar.gz#sha256=057b560c669527a784197a2f8005689d331f62f4765ae4d14bc2217e82dcd8af (from https://pypi.org/simple/bx-python/), version: 0.8.1 2021-07-15T16:14:21,271 Found link https://files.pythonhosted.org/packages/7b/b9/fb458d37d89fa71ce39475d9a44d7830950c3cd6533879a2115a42ac122b/bx-python-0.8.2.tar.gz#sha256=faeb0c7c9fcb2f95c4fc1995af4f45287641deee43a01659bd30fe95c5d37386 (from https://pypi.org/simple/bx-python/), version: 0.8.2 2021-07-15T16:14:21,289 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8c/8a/51cc793ef328dbf61aaae3b21b72d493ee235a93bb1a2171198b7a6da401/bx_python-0.8.2-cp27-cp27m-macosx_10_6_intel.whl#sha256=3522c03f2604f5f070ef1129c66ae0b5763ac30399e357b0c96c8f29dc054e4e (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,289 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/57/29/e45e37b501d037256b6bef11089c824603a9328bc2f3c3177c3b81bf54e0/bx_python-0.8.2-cp27-cp27m-manylinux1_i686.whl#sha256=03a5599f3dc593f86ef6e36fef1af1c5cdb79b6a0819d8bca5258f29de9316d0 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,290 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f8/d8/d588dbf6ea9a46a91bf60fcbdf54690ead1014b538725a3db9594acdf73f/bx_python-0.8.2-cp27-cp27m-manylinux1_x86_64.whl#sha256=c9132bc8fe10fda342eb97924504f2d1072b917892842b19c3557ce656d68ccc (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,290 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c9/0d/86159e1b51cb9b8c0d243351ea8f4a04c3b6a29a99e0996d74747e71f26a/bx_python-0.8.2-cp27-cp27mu-manylinux1_i686.whl#sha256=8d712bff8e6df0937bcf9a7efbaecabab09952a254e7941f7a1f95453f65fc6a (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,291 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/83/95/ad170d3253051a6821f119406eabf30281d8d67fe411bbf5c10d45c66626/bx_python-0.8.2-cp35-cp35m-macosx_10_6_intel.whl#sha256=5ccc13a32e16636898c2cccd460819c2e32aa6a5f20c441912af55bd8fa7387e (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,293 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f0/a9/c3f55652261d8e22ccb87332a17ea5eee9e296c063cdc559cc4c5cb077a5/bx_python-0.8.2-cp35-cp35m-manylinux1_i686.whl#sha256=8a2d031eee8d84500047fc434d1a1f67305f5e07b427afe4a4283ef8be3cbb5a (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,293 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/de/c2/4bd23312465b448017a8f66e1eba1bee0f8ff1dcd3168c0e134222309edc/bx_python-0.8.2-cp35-cp35m-manylinux1_x86_64.whl#sha256=218dd6b7d83c84fe3ae4ba906101e59fdcd553540253124d743f79a0ccd00b74 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,294 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e1/d5/75bb409db607116f7e2b6ceb199a43e35ec052b08ec27e0eeb0a94403972/bx_python-0.8.2-cp36-cp36m-macosx_10_6_intel.whl#sha256=e10e66d96c399ca21326af919b405055f3f1c66880ab569f55b0d54fcd424a71 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,294 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/96/b8/b607e495154b0397f37da09dde4caa617cae48e3191b0842edd505c51ba4/bx_python-0.8.2-cp36-cp36m-manylinux1_i686.whl#sha256=f3e568f5858a11a2f9fc573036b983d189857ae90c6da40fc1ca3c15c5556a8f (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,295 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/59/a0/6a8d14ae2ee8eb9c903969b65d598c9f0d4f0dcd7c849dda3ad7b9bb0bcb/bx_python-0.8.2-cp36-cp36m-manylinux1_x86_64.whl#sha256=1600342b4b9cff53e1a4554f75486d110726f647d9a46db25ed64d1b7f3b054c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,295 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5e/cc/46e368445c8b288c4049ea3c8065321e19d21052f8f57061dfef54fec15e/bx_python-0.8.2-cp37-cp37m-macosx_10_6_intel.whl#sha256=b96e8afa295d45e3db53468d7d01c1adea1671accc3c64b51b2e1598eaf50c03 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,296 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2a/13/1a5d6ca25e16aff4b95cbbc6f84614ed83f93eae9a4b8d5c074dd350f666/bx_python-0.8.2-cp37-cp37m-manylinux1_i686.whl#sha256=d391ca89a8b939890dc6f72d87e3ca22a62fa183269a4651967bf9f9b48ec0dd (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,296 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/da/fe/ef6f4eac24793a24d25da79a3bcfa429739a54597e493a2a7a78efa953dd/bx_python-0.8.2-cp37-cp37m-manylinux1_x86_64.whl#sha256=0b773d36f62faf4848b1088af2e94c226494474eab27e69da5d564ca61222dfb (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,296 Found link https://files.pythonhosted.org/packages/ff/49/8f37bbd3e618c6ef7fd70d255b712dfce41b69059069d46e0660691cacb5/bx-python-0.8.3.tar.gz#sha256=5ba295d3c2cf4d106d069dc53d8d09e4a129b8cc8cb41ee7d72f562b3930c339 (from https://pypi.org/simple/bx-python/), version: 0.8.3 2021-07-15T16:14:21,297 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4f/13/9b864ccd3b7b206f174b8942f38bced8c39ae1070b40329e8e75789c0ae7/bx_python-0.8.3-cp27-cp27m-macosx_10_6_intel.whl#sha256=67c35882c542b6b7966f930c8d252298a5ecd1b731eb861aced74af4fabf934a (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,297 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6b/0f/e5a25c17e4730f2afe770a43898eaaadc6f9264ec73b589dc2d981614098/bx_python-0.8.3-cp27-cp27m-macosx_10_9_x86_64.whl#sha256=1d00f65639b924ad14f616babf68f96d1b4d238079732c7e7ddcb4977933e4d7 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,298 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5e/93/0c0bd7b0bcba395b30ded9d249667a48eb5ca34746c97c5051f4dbf92002/bx_python-0.8.3-cp27-cp27m-manylinux1_i686.whl#sha256=bb6f9bdd97246e9997a19a933dd7dc42cabc6f219a99e171322890f5aafd7fdb (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,298 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9e/42/0c71892e96ca96214faa48c2189f6d0b9fb22811c16c71733344f10de943/bx_python-0.8.3-cp27-cp27m-manylinux1_x86_64.whl#sha256=8b2113c277e104846e4340034ca7caf3289e41e1adb6f2a51cca2f1f96fd58c2 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,299 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/45/7f/129997471d4b8aceec55a3d383fedc8e0b13f5c1b2cb99572d31a00d4997/bx_python-0.8.3-cp27-cp27mu-manylinux1_i686.whl#sha256=7a3b632113f16e5fb16bdaa92502ba4081bcbca16c67fb35d66bcba5d9ba520c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,299 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/82/b8/2cf1d86c44040487f7d65a9c663c4a7ffa6444eb590395fcb5714696625e/bx_python-0.8.3-cp27-cp27mu-manylinux1_x86_64.whl#sha256=a80fe51a637de53a1b8465eec9495eaf28d725ceb4f6e68eb1ba5231d3a368b6 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,300 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/cf/a0/f476fc33b50248e7c38e4f6ad3a6cc573df9611f4676e470c2bb0b09571e/bx_python-0.8.3-cp34-cp34m-macosx_10_6_intel.whl#sha256=9795c6d17ba7d0fb140980fd625c0d0b61d74d9dc09493a5741658553ba1d0eb (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,300 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ba/18/d1a2040f69ad038e18d8c6cf2abffb30ddab9ff145606c6579d151c4d520/bx_python-0.8.3-cp34-cp34m-manylinux1_i686.whl#sha256=4242c3c18dc1fac4692285e0df62958319aeb7c4c82896d88b0ad73db16be022 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,301 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c9/61/3db50d123078c32a205bed303b000ee43cc8f27dc80c168e7d4bc7901b84/bx_python-0.8.3-cp34-cp34m-manylinux1_x86_64.whl#sha256=468af6576d21f442ac2a01d4127a33682607900a32aab01c145a5d501fc0a6f4 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,301 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6e/2e/12578ff7e08fbeb679fe3e210b865ce990851449bc7884a6fb91e990db23/bx_python-0.8.3-cp35-cp35m-macosx_10_6_intel.whl#sha256=20c17a70b25cc298bcb5f4a0dca66bcd9fb0b7873fb3278786260d1af2745e54 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,302 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4f/00/e5354ec07020c85138233794823f094f0ddd4fdbabfc49e17b1d2fe8e4dc/bx_python-0.8.3-cp35-cp35m-macosx_10_9_x86_64.whl#sha256=68ea36307387e563f9a154982e9b26a88b9b7bca73e5aeb280cf7456ddab6409 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,302 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/20/d8/4f3b480d634bc375aedc95bb937df62b93549753da4a2c56520e1cc95d45/bx_python-0.8.3-cp36-cp36m-manylinux1_i686.whl#sha256=a5065d491c9b09892d987fcfa6161424bdc483997d2a594eef7c7d56e4098504 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,304 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/42/9e/77e265b366d82e05f0e6ded64edc9a9ac85c2f90b8a7282c3499c8b87f8d/bx_python-0.8.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=36671c09ffddf5d563adbcfc04957f5b2ae5283cf6701b3f432ea4224a7a2cbe (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,305 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/38/fe/875f36c5dd357b28f2b6ddf08831c12a0322092ec43d07891059a7fc6b83/bx_python-0.8.3-cp37-cp37m-manylinux1_i686.whl#sha256=0f264de97f1075d9e69ff019bd714cc2bdbbdf269e786eb9f337ca2f366a8a3c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,306 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8c/9d/54252e8406a16c3caad7afef21508050578c467160a574ae01d672648029/bx_python-0.8.3-cp37-cp37m-manylinux1_x86_64.whl#sha256=4edac451aec0603daed406d2abd6043f920e78afa9e4b6402021bad149b81da5 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,307 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4d/c5/9c8bc28c0e58c1f88bd66bb0f42cd20b82f289935f766501d57818972e0c/bx_python-0.8.3-cp38-cp38-macosx_10_9_x86_64.whl#sha256=0f8b9ab987a6914b5bae5146211aa5e1536b8ab9cf73f6fa6ff8ca79b127347c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,307 Skipping link: none of the wheel's tags (cp39-cp39-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9f/55/84d2bfff30b994740e61acbdf4f37a9b8d616c5ab115bd0f655f42b94af5/bx_python-0.8.3-cp39-cp39-macosx_10_9_x86_64.whl#sha256=a12d573834814fb4d407a10a1453846e77ba16b22594129f967172c6cc6ea6c3 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,308 Skipping link: none of the wheel's tags (pp27-pypy_73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0e/43/d5aef355dcea90ee753003158f7701bf65a625a66f0c79725274652e4cc4/bx_python-0.8.3-pp27-pypy_73-macosx_10_9_x86_64.whl#sha256=ea46f1703e8b16faecda111eb9d99a6ca7e4542f06bb8c17a9a5a38714fe640f (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,308 Found link https://files.pythonhosted.org/packages/7f/0a/2e6f962221f12ac2aabb51dc31dd08ed5f769cad5abef831619d7ef42e80/bx-python-0.8.4.tar.gz#sha256=9698390a777a41d3b7f5e833ec1bacb8193fea847889a2092c848afd6b8a7b85 (from https://pypi.org/simple/bx-python/), version: 0.8.4 2021-07-15T16:14:21,308 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/02/74/ba10104095bb2c208b6bdf7164674aba07069c22f75da1be22a71364a18f/bx_python-0.8.4-cp27-cp27m-macosx_10_6_intel.whl#sha256=0a1fad247a647efd79e5ad771f60a5e2e61bbdc502440da37c367840874b7b9d (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,309 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/fb/a4/a9df49abc7d3d7a5f0efbe3a59f255b6f3d08b56178f39c1ae71e0334431/bx_python-0.8.4-cp27-cp27m-manylinux1_i686.whl#sha256=6a393293cfa5494706e68f39cc731921f6f18fcbcadaba9b1acaf885e175ff44 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,309 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a3/f7/1019ff3c57d68d9839adacdaa4fc380b477b994fab38b5bff0e282cc56d0/bx_python-0.8.4-cp27-cp27m-manylinux1_x86_64.whl#sha256=913960f27bfd61a906aaeef58103f7d926e408d2a876ab2a6b4c8810c8963197 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,310 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f8/a9/6d62f61f8bd65c5e95b11add9a125a59db66c9f37c7eddfbda950e8788fc/bx_python-0.8.4-cp27-cp27mu-manylinux1_i686.whl#sha256=ce24d1d10376e2861892e05a65a193737407d0508096195d7a8b99a5680111e7 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,310 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/55/fd/fad7621833686f26f7d5cbeae03584599d13c289ba980af41355e7ef27ae/bx_python-0.8.4-cp27-cp27mu-manylinux1_x86_64.whl#sha256=b5dab08d51ced45fb49589ea23f88be3b77af6f130a8434e6ef593862575e114 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,311 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/02/a7/78b4dd40a91ce9f0edad78ec7a59cdc80e54251e12d220a617db92e4b8ee/bx_python-0.8.4-cp34-cp34m-manylinux1_x86_64.whl#sha256=051f3ac05966d9d126f6fcda4e2974af95f765e47f39bc949f3caae2e53a8c63 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,312 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a0/83/9349d58458a4be5e83c46441de52e262bc73927f59ecaeff8b1132b33299/bx_python-0.8.4-cp35-cp35m-macosx_10_6_intel.whl#sha256=5915a8b725dd628c4a19a1b137dc871300731d24c7e54afc1306867401bde44c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,312 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/04/bb/53c90ff62c9eef8440e9fffb45306eba7cd6ccedd4d4ea2f09c6d748b1b6/bx_python-0.8.4-cp35-cp35m-manylinux1_i686.whl#sha256=9d3acd92a7add8ab80710fc18cbc81b81d0a9c8a8328944540139ba3551d9d14 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,313 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/73/74/c67d3fee1c6430679bb91304cde970fe440f13726fbc238367bd39cc6a0d/bx_python-0.8.4-cp35-cp35m-manylinux1_x86_64.whl#sha256=10e1546250dc3912df9fddbac1ea63790dc806dd92bf8e960ae8c926533371a5 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,313 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/42/85/30944623168a67f4e29b65bf2fef058b438d36ede86daa744d305aaa01a3/bx_python-0.8.4-cp36-cp36m-manylinux1_x86_64.whl#sha256=b904e804d11b0d28fc2447ccc66433b0a10f8fb193c8f89794d077e4c3075d3a (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,315 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/bf/78/5e69362f2b449a21b508980b94949b18f87b8eb3735c081128e0c7ffd545/bx_python-0.8.4-cp37-cp37m-macosx_10_6_intel.whl#sha256=1d45d63c419aab89b302ab15bbffc9119ec379d5d01f7ae17708c4ddbc3ba6bf (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,315 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/24/4c/834ddffde232a14e2fd230ad3193cedacdbd4495667aea9313346ee048d9/bx_python-0.8.4-cp37-cp37m-manylinux1_i686.whl#sha256=d0fba78794b3f24ee402c89c1a2fda0fbb4d3ce5a617195c713b28fd286a2e5f (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,316 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/57/66/2f55a309ddb7406155d4653a3f75ae6a041f04b833964e907ee950c1b227/bx_python-0.8.4-cp37-cp37m-manylinux1_x86_64.whl#sha256=6a83b0e97d79150c03eb634a6d5171fcfa6f504b274ab34f4ec51715a3cac1a1 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,316 Found link https://files.pythonhosted.org/packages/83/14/90c855fdd0f696f9d42433cd3f11cc35ac25faf4459fbff5f5defcd3a05c/bx-python-0.8.5.tar.gz#sha256=a01921da9c862c7a568dd7e4896de5a96eb4faaa990edc3baaf68186a158d981 (from https://pypi.org/simple/bx-python/), version: 0.8.5 2021-07-15T16:14:21,316 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/34/92/14237a6dccb848128a1f9e83fe0153d019c714d9c5a72a637a530efb4a9f/bx_python-0.8.5-cp27-cp27m-macosx_10_6_intel.whl#sha256=890f3fcd6e4569e48e50fcc4383351ab740121242134ca35bde9184c4bf04d29 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,317 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/69/fb/b10eeba2bf259e8baa0dc23fa8f93b4d159bd5dc4b8862fd4181988235a1/bx_python-0.8.5-cp27-cp27m-manylinux1_i686.whl#sha256=b575de5943852daeecc325dc3e2b0036fb4059cc00af9fb149b3fc5c249aa0fa (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,317 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/90/cb/bb3cebd69dd5d0905dc2d7e621e0eb72e0b3d6a07f6b520c81876e11ef6d/bx_python-0.8.5-cp27-cp27m-manylinux1_x86_64.whl#sha256=e4e7efc66fc1fb6551cce22dee2ec00d501bcf7d73e49f28a266cfa4542d28d9 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,318 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/5a/aa134b89abbac90f5215c98758ebeefeb307a839921bd8982af161ddc9d5/bx_python-0.8.5-cp27-cp27mu-manylinux1_i686.whl#sha256=5197ed272e1f1d1db1d824f18d10196d5d4c3596cf4ce3e4932c8057a6e4d307 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,318 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/14/b8/1c40ee1582302784ffe32c8b2ff32d3562ff43b37b8b32a471ef74ab781d/bx_python-0.8.5-cp27-cp27mu-manylinux1_x86_64.whl#sha256=77a317d87c561bf7eab8b2460e799d633da85047d5d6190ff62fb01fb2324143 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,319 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d0/bf/27fba4dbd8c871c298102a6284177dca829e2b44bf90dafbc667316de8d2/bx_python-0.8.5-cp34-cp34m-macosx_10_6_intel.whl#sha256=571e7b7e563a95269f10b28cee4b3e2e9b48f51323492c61ecad812ab3e4c796 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,319 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/04/93/c068b540aee17ff56f67889a98cf01e2937c73746ad871fe83f4c5da76a5/bx_python-0.8.5-cp34-cp34m-manylinux1_i686.whl#sha256=2f0ed1c1753bb3a9dd2b4e18afb28098285c5826978dcc60664b36dde3a9af9e (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,320 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c8/a1/fbc49d46986ecbd18fee8b3ccb81a4ac81392a0982cfabb19ebd644618b2/bx_python-0.8.5-cp34-cp34m-manylinux1_x86_64.whl#sha256=f5ceee121b235a339e0dd0ec4b916fc5652a614cf6e0b9b6ea90709420b5b7f1 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,320 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f8/01/c8b093789bcc75dee484064d067e8dcb988fe2d206683e12ec5af989772d/bx_python-0.8.5-cp35-cp35m-macosx_10_6_intel.whl#sha256=e8d43ae52ccbae5677c1bd18e5f7fde696089e8a409e90255998cc51093a28df (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,320 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/fb/bd/2894e64a7509bdafd6e52d466441445b39e2577092789efaffc6ac5a56ed/bx_python-0.8.5-cp35-cp35m-manylinux1_i686.whl#sha256=c16866889d099d8fb2bfadf8baf92590120681c5cd93b0274c36b4173a7acd7e (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,321 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): 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https://files.pythonhosted.org/packages/6b/09/770b928aae101d4cabb0594421995dbf2f3fac0712933cb281530fa159f4/bx_python-0.8.5-cp36-cp36m-manylinux1_i686.whl#sha256=c241be5fc818aea7897c70e865f590c9397a9c6a15debd9476024a59f06c1ed7 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,322 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8d/98/d041efb521a6a85e9305f07678c880f7c51e54509b19492ea20659021f60/bx_python-0.8.5-cp36-cp36m-manylinux1_x86_64.whl#sha256=5cf382c6c03d23856a1380a99d4a6405b844b24898e86004037d12c212868e98 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,323 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/de/61/faf4cc59b794b8f7fc38e5f934064b8a19c4e253f7631f02a0a0c4c015a9/bx_python-0.8.5-cp37-cp37m-macosx_10_6_intel.whl#sha256=f5dfaf074bd3e0da90f856b8a55fbaeb3b50757c89c6771ce0e3883cd84fe8f6 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,323 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8d/e6/29b183b50fbdc77cf0482fbd25df8978d28b3ded35f926d6b12487fd3910/bx_python-0.8.5-cp37-cp37m-manylinux1_i686.whl#sha256=e4aa38a28efc6c9838acb57e70a6488a8d8c3f76477f18e74b611814f38c7c1b (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,324 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): 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2021-07-15T16:14:21,325 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8a/ad/b6ca5674007c0434fe2be300d65faf99a77e9d022a93c09b778f3d3e2294/bx_python-0.8.6-cp27-cp27m-manylinux1_i686.whl#sha256=86778e9eb4f195160cd4439fb46fcb22bae4219d714982f08c17c13d71d9602c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,325 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a8/4e/498dca333572492dccce17d94b7e9eea04df51d25c85c5c616178f53e2a2/bx_python-0.8.6-cp27-cp27m-manylinux1_x86_64.whl#sha256=4dae36031d30154a5aae40020f7c0cfc27dc142e412ff224304dbf6633a408a9 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,326 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/70/9e/1db1e6263a146d5a2e87467b6ca4cd4ff4a06f72206d6ff81f7f25afb2c1/bx_python-0.8.6-cp27-cp27m-manylinux2010_i686.whl#sha256=078cdcefe7e1fbb90bf037c32486df1b20d7518c3cbb880ea5d7efa530475b1f (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,326 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6f/43/86b935d3626eec97978b12de73242fdc6c251f3c073bd6c19321d2a6dc95/bx_python-0.8.6-cp27-cp27m-manylinux2010_x86_64.whl#sha256=e5dd177782d186ce33a343e6c7ca9def3dcc5e1228c14b1810cb0b1eade2f86b (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,327 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a5/ec/2cb819195027d79b95e6bd292d62d8cdf9469da68bdfcd71ffa77fb3c86a/bx_python-0.8.6-cp27-cp27mu-manylinux1_i686.whl#sha256=7bbfdfa38f493157dba22001e5d96bdcdc553138584af30fa63fd8e5739fe7d7 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,327 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/43/7d/ec1b6eac2b3579062cb87a33b5e514a35737d85a18422e69f3d54373d2a1/bx_python-0.8.6-cp27-cp27mu-manylinux1_x86_64.whl#sha256=747a7372e13fbb115a98593654617134a2c3cd02ede62113539a2b7296821fec (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,328 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b2/5c/59eba4e4b79426c77f81823dc7c0d77bf7765e51204051f43d009a870889/bx_python-0.8.6-cp27-cp27mu-manylinux2010_i686.whl#sha256=83816b45f2ede9158d9c18a5f2bdf0c9fe6c5c868e63fc259ddedaf048fd94be (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,328 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f2/73/66ecaee12aad7c4955a0451b7f621b4fb3ed9fe0868caa80b60d16e4b806/bx_python-0.8.6-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=980c65a6119cd71026696e833df9d4d1fca0c83a75125fd1bbacecd833713178 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,328 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/32/1f/ac5914fcfa04bb557482761fa4454c2d953439896fa704396cab87e62ea1/bx_python-0.8.6-cp35-cp35m-macosx_10_6_intel.whl#sha256=ebfd8751fd8a4ceb24a69b6fc1a8c29ff1b3a681fa4e4a1fd39a7e322b96fbfb (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,329 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/43/6b/a8841c21c6e09a0bf042b1327c5d24953d62edddaef127f527925ec19649/bx_python-0.8.6-cp35-cp35m-manylinux1_i686.whl#sha256=cf97e9b3def0814af58164b1f3ffba21a6910af8ee45e9154b11bf20da003916 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,329 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2c/11/4a0cadfd36e2e5f01d23020c248aeadece52fbd87a8154411af51999a950/bx_python-0.8.6-cp35-cp35m-manylinux1_x86_64.whl#sha256=83d03b9cc3c3bedf3e1d50bac3e16e5d9aba87033992bbeec9e04e74c6fc26e5 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,330 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e7/7d/1b53cdb0add6b5af8d2833d6d767ec32837bd2d7ca3cbc14eee71922c4ab/bx_python-0.8.6-cp35-cp35m-manylinux2010_i686.whl#sha256=615f9eec991211312252a7a73d7e1a3338ad7dba30f57cff046da254548ebccb (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,330 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a5/d1/2e20ce2b89077eec5543d55601bdc94f89ad36fd73bcd12417692aba1214/bx_python-0.8.6-cp35-cp35m-manylinux2010_x86_64.whl#sha256=cee5454447e6e3545f94e650564e519c5688375b47b4b8dbd60b7f937bc0d21d (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,331 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a6/b9/a35beffd3322c8cb2abc536acc93428b8080e161f43205aa5b3d6cbb1bc0/bx_python-0.8.6-cp36-cp36m-macosx_10_6_intel.whl#sha256=070d3e716e600a9dc6be26392f1e4d5e8764b8eb573fabdb2b1ff5f493c993a3 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,331 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/9b/80/df46bdec8c073a34893e6e15962752607ceb4379503857a414e21e03be42/bx_python-0.8.6-cp36-cp36m-manylinux1_i686.whl#sha256=a48a57e60f5f4ebbc76b85f077eb48e31d1ac28c9c8aaf60b28f74ca0116ea9a (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,332 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/27/c3/9c70a1544b332626ba607b6c6f6b82365087ba5c6c21b7db3126406f707a/bx_python-0.8.6-cp36-cp36m-manylinux1_x86_64.whl#sha256=ef05a445b5480031b977d144b5984a0ea5f6bb59e2b18db4da0b047e82fb3303 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,332 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1f/a4/d2e237c3289f3cf8b45d50bbf05df8e9d721a6560288a93f42ab82a23659/bx_python-0.8.6-cp36-cp36m-manylinux2010_i686.whl#sha256=1eea223f1facc086df248c0ae339133832461504d95e1a8faaa134274489694f (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,333 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a5/59/9452703967ce309b7a0e5ef1a96ab6fb1b460396af4167974ced28a30a53/bx_python-0.8.6-cp36-cp36m-manylinux2010_x86_64.whl#sha256=f5417fd1606af200cceea114260cd47668d49842459496e94725c9c7fb6359b9 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,333 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_6_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/f7/12/1bb56f5b2364e9ff213d3c8bb2d1a603353e2426f4817896e87111adf742/bx_python-0.8.6-cp37-cp37m-macosx_10_6_intel.whl#sha256=097932e2be98df0dd8f3efe3dae0129c3e8e73f817d7bbda09f72e95ffc071d3 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,333 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4a/73/99fbb7ec8a3a96907027690ed700e762592944395eb9864d0299267f5f32/bx_python-0.8.6-cp37-cp37m-manylinux1_i686.whl#sha256=c80e1c41b5dbfe77388689dd46e7f57ce8e88a86c8341a6438bfed1cdccbba93 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,334 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b4/d5/09b47275929b83679949d8ab61065536c0beec809e009192fee0abce2050/bx_python-0.8.6-cp37-cp37m-manylinux1_x86_64.whl#sha256=09c3e2baede99fc296a44030626e51b01383fae5367ce54c06640cac88951606 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,334 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2f/f8/2c3da7e7b502ea17561dfae2040eaef3713ec3971c3d6561da1cb706988c/bx_python-0.8.6-cp37-cp37m-manylinux2010_i686.whl#sha256=9c9cd0f17f0f0293f7e5309a194b56169eed052f3d1124702139e44eab1e5d2c (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,335 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8d/19/aa61efde1460be908ce0bab9eefdf582c06b194c20c43bd8fb6ac29f1764/bx_python-0.8.6-cp37-cp37m-manylinux2010_x86_64.whl#sha256=9a41589715d261c0dcd5801ea4451f9ed1b19423452b30b9d911af183b392d0e (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,335 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/26/e4/e0c4a4bbf934b6c7e71ab12f2f55e3aa22835aa2e0390fc51179a68ed6ce/bx_python-0.8.6-cp38-cp38-macosx_10_9_x86_64.whl#sha256=140a24e7db4b2aa8ff51d125f1b4408b82f651d558676206cb7188440c0a7e6b (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,336 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ad/99/381476123fc39f6fa0384d3eab3477f0a3d22cce6aa4432e29a68209c299/bx_python-0.8.6-cp38-cp38-manylinux1_i686.whl#sha256=63a8ce14fe4102a25ef39216022698170bd64e0e7dd2817b0fcaaf2f1b795940 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,336 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0a/80/31f4cbe6de38e56f8bcaa4e24a47e6470b74f35f6a3b6e7b9d1a3cb6827a/bx_python-0.8.6-cp38-cp38-manylinux1_x86_64.whl#sha256=0b3b6b4576dc708d0c81f817a33b8e8853125e0d6f16e995292c73b25c64c168 (from https://pypi.org/simple/bx-python/) 2021-07-15T16:14:21,337 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): 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Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0c/17/7ee812ec078a9034789f626133be5a29be87a40bb980bcb14217e675141c/bx_python-0.8.9-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=f1e2e195dc435af0b51ba71c5870112968e67b71f7daff068fda86db1809f480 (from https://pypi.org/simple/bx-python/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*) 2021-07-15T16:14:21,384 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ea/79/d721f55cec220ba73c87bccb16cf3d232c3c152da83c921f7748dc7e6963/bx_python-0.8.9-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=4c78c7f5847b0826b044db52651c3ac168f30b0163b990e2c15da6e7067e57f7 (from https://pypi.org/simple/bx-python/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*) 2021-07-15T16:14:21,385 Found link https://files.pythonhosted.org/packages/e9/0d/cdde9b57ae1f62da0302b73e3e7983723f081b8098f745a9115af3bc89ab/bx-python-0.8.10.tar.gz#sha256=f1e17b85ee5830b6e634d3f7e7f95adab8b713b9d10511feca4d8bd921c27304 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6), version: 0.8.10 2021-07-15T16:14:21,385 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5a/15/7adb95c9da8fdf2f947240b7cf1746c63b8699decf9c9f0b02b50a7e9322/bx_python-0.8.10-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=5511008cad21f921e0025eaa665d9ddd41926d95144ceff9b30b0f45c4d15525 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,386 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/11/64/11d88881ff08a5bcd0721eb9a34c8f157433a1fffd3a4fef2e16a0a37c1d/bx_python-0.8.10-cp36-cp36m-manylinux1_i686.whl#sha256=f5a51fac77ffe78f9aa41d85fbf6e75a697cd7950797f92d79301776a7706375 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,386 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5b/98/52825b4bc72e3274891cfe105a559118b65e272aac3b24a9dfaf7aa395bf/bx_python-0.8.10-cp36-cp36m-manylinux1_x86_64.whl#sha256=d80aafda0f90be99572c84ba99a1da59062296f6234e5342a56a42f70aa75a5b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,386 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/63/1b/4cee3239bb0ec441b16e22707da1ed4bf692085830751a88abbeb16c15ff/bx_python-0.8.10-cp36-cp36m-manylinux2010_i686.whl#sha256=72d864eaefed000e35c1a7859524b2c2828047c5bb32c5bd1596ddc5b775e307 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,387 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/36/e3/353511735f350ba528dcc2aa7ef90f76a3779dcd4876ca61c41e4f9cc026/bx_python-0.8.10-cp36-cp36m-manylinux2010_x86_64.whl#sha256=3ca443537eabd6f1901b7f253e893742a0bcf50e9f2f3986a8080ad01beab1a8 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,387 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a8/05/946515212957a09309192e2c100ea09b36d1b7c0a20b230aa96c89dfa00f/bx_python-0.8.10-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=76c6fdb02b3154ef7445cb9535185543c47ce136b5da71a29cfb28a82814ecd4 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,388 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/96/64/ec84f907f77a539b47b8bf53b8b1fcea99115a7766337e1fcf571101ccfe/bx_python-0.8.10-cp37-cp37m-manylinux1_i686.whl#sha256=e60ef8a7ea3f2448d4ce9aee9ae0b806948c8158001794af0b1195bebd477d93 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,388 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a7/9f/35bf1540470c9b80b96b86a6e4ac1a75c566f19bc3f4e08b2e4e141b4af6/bx_python-0.8.10-cp37-cp37m-manylinux1_x86_64.whl#sha256=fe7c1bab4e264acdef278e04895943a2b9185629c82069699cb5f7c2ee3aa77c (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,389 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a7/44/8b00881dfa6c2b49f5102f43166fdeb873a544ff94aaf0f62cba1c0d1bde/bx_python-0.8.10-cp37-cp37m-manylinux2010_i686.whl#sha256=6a35dd006e73815501ed645ad11efee57ff95209d9ffe0bfe5177d498887f516 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,389 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/05/62/d29d52bde474dd07f370c2a2d88cb411a7869c6c98bc3c6c26a5e753f4f3/bx_python-0.8.10-cp37-cp37m-manylinux2010_x86_64.whl#sha256=c3b7bbcd008e14d0ddfd0c312485402c901db81af0b598f64d60ead6633334dd (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,390 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e4/26/3d2d33313678e3b76d53988d30753fc2ab34c824a46d5bfd56eb2f8fb67e/bx_python-0.8.10-cp38-cp38-macosx_10_9_x86_64.whl#sha256=34e8dcd22521a744ad218749dc46688da2ae410d176b1eb8222e853343bda7cf (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,390 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/3f/a5/f4fd1c7bdf95fa4c175a9829d591b33f4b89a978aaefd43a9496badd6b8d/bx_python-0.8.10-cp38-cp38-manylinux1_i686.whl#sha256=5ead629c48f072400f2d92b4b7c0263d3e04544993436190b8816c49a006d8da (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,391 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e8/20/9d09d53fb8f10d0e1a8beafb389a6138a0bba3dc5c38caa703360fbee2e8/bx_python-0.8.10-cp38-cp38-manylinux1_x86_64.whl#sha256=1a157f14e16e5bd887aba38a77477c45a7148a4a91e890317759c4164930836b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,391 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/96/a8/97843069ec65305d6b2bc8e9f1c41c16dfa1087297ac66d4f57f41ef53ca/bx_python-0.8.10-cp38-cp38-manylinux2010_i686.whl#sha256=dc4f0b8c4194f497726223ee4371841675aefc88a972c3aa581014c35969b96b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,392 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/45/fd/4e61f1b043de87f691ba95aa2908bfa8a4a2e2fe103c83c240280461df05/bx_python-0.8.10-cp38-cp38-manylinux2010_x86_64.whl#sha256=c12f8b920ad5dd8314d0f899e38cd6db2345d223979474cb11aa23e8d9012631 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,392 Skipping link: none of the wheel's tags (cp39-cp39-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/3a/71/f552a7bc9757e70976b6fb89ffd4f65414e64c8877788c3ed22e8f14973d/bx_python-0.8.10-cp39-cp39-macosx_10_9_x86_64.whl#sha256=b4257626878e92736057971755a9818839111abb715214aa940b819168a5476e (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,392 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/72/ee/e9cf75b0fbe389125ecabc45e3eacabf0180e8670c622d9db05d63cb5154/bx_python-0.8.10-cp39-cp39-manylinux1_i686.whl#sha256=dd9bbcbe35ae37abbb4ce95db90ae0649a2659be4ca1193d028bbc518a525c58 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,393 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4d/4c/8f943d44576ed83ae7442f5e2d491dedcb435af40e69ac4593ba5c705a27/bx_python-0.8.10-cp39-cp39-manylinux1_x86_64.whl#sha256=57140f120ef02f06410543f04b8d7c1051bcac08c7a10088ba5797fe154888e5 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,393 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/43/dc/1de7b82d1b96b246cff9fcfba17ea2d6136bf66d987bdf5bde59e62bd05e/bx_python-0.8.10-cp39-cp39-manylinux2010_i686.whl#sha256=6792bc5a71f1caa67114c26c5eafe10abb1896a55ad7d326b108e791c9804130 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,394 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c7/78/fb2fb4e52e688cae1fd9bf1a441eb0a5beb062666cfff673611335b08dd3/bx_python-0.8.10-cp39-cp39-manylinux2010_x86_64.whl#sha256=6a267531c544f4dfbc31b94b384966004be5718aab4dd0141072b337696767dd (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,394 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8b/e5/51ff86a839d79e47b514c9fa4b067b4ac63fc4a8ab4bd6a965de5a29bbdd/bx_python-0.8.10-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=76e960201699d3f8a0746f82e30296ca3cef713f6f928112d3a6134078f87d6e (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,395 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/52/4b/78a3fbdc30d7754c426c308f7dc16542bd886a631747edc9f5015e789d4a/bx_python-0.8.10-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=bea61fc3d1e70423feb1f0e5ad5fe0a2cc9709258ba5e97eddb30b4a875ce751 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,395 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1e/03/91f741328629e5b65489a69b88a57720fff97644519c29684c3e3ef963e6/bx_python-0.8.10-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=491b80194abb27ce4a5896e478fe53744139bd8692b96c7e248a7f8fe196c76c (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,396 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/65/81/8962aaf607080f670136562af5171a4e29b963a0321d7c1662d5c2088500/bx_python-0.8.10-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=c05018a0d34dfc3185185cead9b12b275341e527fd7626830cc4cc358d01926d (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,396 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5d/63/e131946f1bed548aeeb75d2ad4cb48526ebd4aaeb40f61f50b4242afdb07/bx_python-0.8.10-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=68bd2dfc301eec76b357a6d354b06c4f0247c61c8d112a80f9c5828371f5dcf2 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,397 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/7d/2e/a9994987c16f0c5993ca071f590bbbd9a1ae00d5bc1c51b70643acfe8559/bx_python-0.8.10-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=c6dee68077e27200df7596ebcb1f376a8ed7724b7d53595118a9bb12c45c4d8f (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,397 Found link https://files.pythonhosted.org/packages/09/06/34d30efc7ee4f94945335a1aa4c5fc461e406f3c9f9f73f6102d26bf1932/bx-python-0.8.11.tar.gz#sha256=7f26c2a5516b999f4330887f2b126608b4d96ed0f1de6e62ee59f3d066586974 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6), version: 0.8.11 2021-07-15T16:14:21,398 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8b/aa/56315a902f6a126e45a2f249ce7ba44acea3a329031200c29473799cacec/bx_python-0.8.11-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=c8a61e3944c888e1099e98caadae84cfb8944c04675235a8417c4cd5b1ca7c16 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,398 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/10/77/969b74a8a2c4610cde8fccb3628a79e979d7b1fd671ae9bb6b79c9da5b98/bx_python-0.8.11-cp36-cp36m-manylinux1_i686.whl#sha256=219381dfecad8d87cbc09c135e3183f312ef0b66778b53a41d2e208819034791 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,399 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0b/ac/fe999126a74ef16b1bbaae444b3502c582544162b26a6c0b139787331a3f/bx_python-0.8.11-cp36-cp36m-manylinux1_x86_64.whl#sha256=ffd619286de4ebe75642f7a4a9156f3bab7a48ef7992bada6f662767a11c1bc8 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,399 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d5/1e/580a7c1a0c03ecd1d91d35d4d5e69c52454c3f115c742a611c1b4e4edf10/bx_python-0.8.11-cp36-cp36m-manylinux2010_i686.whl#sha256=19603a14783af56280e0de7f092b8de775b2ce786a87724a40d8a5bc60fd78bb (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,400 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/32/0e/3e65963a1aafee0e36d5fdec16b5d6a965d7ec31afdbf59668f12d85fd3a/bx_python-0.8.11-cp36-cp36m-manylinux2010_x86_64.whl#sha256=25deb190b107ecdb91b23f1c68cbdde0ccb27df632eab06c0824792f888767bb (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,400 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/62/7a/552f13359097301b07358cee4a2b7cace6e844542967aa9390ebe41e079d/bx_python-0.8.11-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=7df75fe1488530103732eb7d2b4ab99e91d2006b4a52f955cb8908069da4d06b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,401 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/a1/60/5b6c19daf08b4a39f6a229351f4497231181603f4a799173020ffcf61e48/bx_python-0.8.11-cp37-cp37m-manylinux1_i686.whl#sha256=2375cd26a82f538bf4ad96e8f70e276ca18de0f234d857817e6005bbdf7f6b16 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,401 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e2/c8/d619fb52e487fe3823ba50e7d3ebba7ecb3eb5d2339d85702b364429bce3/bx_python-0.8.11-cp37-cp37m-manylinux1_x86_64.whl#sha256=f1ea0429bc882cb5fbb987888ed416b46fe365a0c6bc15056704f16f19083e4b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,401 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5c/56/e5e1238d7a88a4eb56c41552b9b3ebd1cca24cba87b8c70810ceed8b6cd5/bx_python-0.8.11-cp37-cp37m-manylinux2010_i686.whl#sha256=03b66e7d40e430363be53129501307ed747079357c11d3eacfd9629f642c0a72 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,402 Skipping link: none of the wheel's tags (cp37-cp37m-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c9/18/04f562cbc03594d7713b35aec0578cf2cfcb99623350778c9df4d1d122cc/bx_python-0.8.11-cp37-cp37m-manylinux2010_x86_64.whl#sha256=7192b17f977eed99ef2aef07408d623a81722e079437f55a44ce48d03b3d93ee (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,402 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5b/d9/a10de8e92ebd96d791f5977b9514de81ed155d4db0a4fb54e8900f3c6b75/bx_python-0.8.11-cp38-cp38-macosx_10_9_x86_64.whl#sha256=859ea10fd4e78ebb2dedb3ff1927241a50fd2087ffb8475bc3e68462bd2537e1 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,403 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/41/96/f9c70e5074a536a17c39b85a3b50d3bea2aaeb5f0f6ecb19286182e4c24d/bx_python-0.8.11-cp38-cp38-manylinux1_i686.whl#sha256=6f9695f36e50a05e83223ce24b496dab124b08f71c85969886ce1d630f2d5302 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,403 Skipping link: none of the wheel's tags (cp38-cp38-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/00/77/82c2a7a81ad5e92829c71b6a7dd115db4f443c58c205a9ece9d49f93b481/bx_python-0.8.11-cp38-cp38-manylinux1_x86_64.whl#sha256=6754abcaa9368d456f45da1271a1aae990c0e6ae6907b22ce9f2a6131bc4ba9b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,404 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/74/fa/54b3ad4cbd9295e6381e5b7e2893102370fd11705b607c2706802697a787/bx_python-0.8.11-cp38-cp38-manylinux2010_i686.whl#sha256=f192b848f99b62c61578093b4cce4eef6f97d0390c55103e51e38c053d37c3af (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,404 Skipping link: none of the wheel's tags (cp38-cp38-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/af/15/8ccc0b60252c717e1047596d71d17f21a7a3076a938963d2aa3550a2aed2/bx_python-0.8.11-cp38-cp38-manylinux2010_x86_64.whl#sha256=a380b44ae954ff5c5c5b504b95a75a35e4d38e9bd8080fa5dd3c9b41f38dc5dd (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,405 Skipping link: none of the wheel's tags (cp39-cp39-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6b/75/73976b2491a4b0a4b78b6fca974bb42b1a3fa445f348a6dfa83dfda170f8/bx_python-0.8.11-cp39-cp39-macosx_10_9_x86_64.whl#sha256=631313cfc6b1c57f561155352009ee102af2c3baf4708c0e5828ee86f535d242 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,405 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/aa/c9/0ca6679e46386ccf434efd4e0c612174d3e3f8500dc6625244bc8d8af923/bx_python-0.8.11-cp39-cp39-manylinux1_i686.whl#sha256=fd2f3529e0310fbb45a7682b2fed67c604bcd1e83a4de67db5b8ae913929a3b9 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,406 Skipping link: none of the wheel's tags (cp39-cp39-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b1/0f/ebc077a5f9af238d7a31b99fce1a470e8fce90a50f1bfc8230cbca2f0311/bx_python-0.8.11-cp39-cp39-manylinux1_x86_64.whl#sha256=c9bb843ae52a292587767ec188b6f8e2cdc006333a43968c9bab5c49e80a52cf (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,406 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_i686) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/dd/54/39ae5f5b0fa0e707c0b58fdc17d859762674b2259dd09e2546f0e97e6c0b/bx_python-0.8.11-cp39-cp39-manylinux2010_i686.whl#sha256=68c52125cfb2b7872f4370f69dd3f206d557483533aa20ea747c8509ae08bb5a (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,406 Skipping link: none of the wheel's tags (cp39-cp39-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6c/b4/427cf1d6e6090ee580f51d12d0b0133570b682703fa39514bff301268727/bx_python-0.8.11-cp39-cp39-manylinux2010_x86_64.whl#sha256=b291113f656becea27c2ea3c1f1f3061c2bf822b376f46dc89f588b77410cc30 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,407 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/30/0a/fc92d003024fe3b2d3a3cd550d7479832ca7701ded9c3c4a9667c89be4ba/bx_python-0.8.11-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=4ca0619a9d1853e755441bb6c6a57ba40ab8a5cca301ef23796c50bdac2e49b7 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,407 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/ba/60/cffbc0eb0e67b135fbfa8bae65cecf5b0014a1bf3e19d67e03ecc769daa7/bx_python-0.8.11-pp36-pypy36_pp73-manylinux1_x86_64.whl#sha256=4d3fb29373a53b97e66ec91ce8c1b3260472cfcb1a9be1ef96ca59404feee12e (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,408 Skipping link: none of the wheel's tags (pp36-pypy36_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/85/55/79dd532576cb1b9e7ad45ac75b21c582cd9f0c1e191b27900fcaf9be4add/bx_python-0.8.11-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=4c3af8ddfb7481f3ef8c69aaa5851043edf27f042ec95a8b6d88c2f0dbf3a36d (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,408 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/23/40/88476393f6c5b371204677ecb62177bfa8bb9f719d23fa025c809400c563/bx_python-0.8.11-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=3a2adbad10c540b24e21b2ca5c71abbb99dd1617d38b2e53455b23d0f638176b (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,409 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8c/62/d7df582698ce4c6bbe4ef3c27f65fd6622cf31b5f5b9d82d74dd9edf7d8f/bx_python-0.8.11-pp37-pypy37_pp73-manylinux1_x86_64.whl#sha256=53516c1b68c7222a95182f55597f977c4803fb57a37277bbbf00c90773c3f3b4 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,409 Skipping link: none of the wheel's tags (pp37-pypy37_pp73-manylinux2010_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/8a/6e/3c16ac592a4fa3dacb0ae83f6b4a2485c28b3f0ba07a3a1d6df0677e1b1a/bx_python-0.8.11-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=b785703d01cbd58b8398dbd4e1faabe48957b8ae0a1760f7870f761a86c520e6 (from https://pypi.org/simple/bx-python/) (requires-python:>=3.6) 2021-07-15T16:14:21,409 Skipping link: not a file: https://pypi.org/simple/bx-python/ 2021-07-15T16:14:21,412 Given no hashes to check 1 links for project 'bx-python': discarding no candidates 2021-07-15T16:14:21,431 Collecting bx-python==0.8.7 2021-07-15T16:14:21,433 Created temporary directory: /tmp/pip-unpack-tle60t6i 2021-07-15T16:14:22,032 Downloading bx-python-0.8.7.tar.gz (1.4 MB) 2021-07-15T16:14:23,223 Added bx-python==0.8.7 from https://files.pythonhosted.org/packages/68/90/d0e158fa1a50bd4907aeefcab424cc2acd6a46c2aafe78bad39cd2c6bdda/bx-python-0.8.7.tar.gz#sha256=10756beaf214146ed422db4bca3d56523680123105f5e0e6aab23a3786124e3b to build tracker '/tmp/pip-req-tracker-ldpb831k' 2021-07-15T16:14:23,224 Running setup.py (path:/tmp/pip-wheel-ytvbu3c2/bx-python_c16b3379844b4731bed2abf47c378b84/setup.py) egg_info for package bx-python 2021-07-15T16:14:23,225 Created temporary directory: /tmp/pip-pip-egg-info-0tvbk0cu 2021-07-15T16:14:23,225 Running command python setup.py egg_info 2021-07-15T16:14:25,134 running egg_info 2021-07-15T16:14:25,137 creating /tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info 2021-07-15T16:14:25,139 writing /tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/PKG-INFO 2021-07-15T16:14:25,160 writing dependency_links to /tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/dependency_links.txt 2021-07-15T16:14:25,163 writing requirements to /tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/requires.txt 2021-07-15T16:14:25,164 writing top-level names to /tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/top_level.txt 2021-07-15T16:14:25,175 writing manifest file '/tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/SOURCES.txt' 2021-07-15T16:14:25,230 reading manifest file '/tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/SOURCES.txt' 2021-07-15T16:14:25,258 reading manifest template 'MANIFEST.in' 2021-07-15T16:14:25,260 warning: no files found matching 'distribute_setup.py' 2021-07-15T16:14:25,521 adding license file 'LICENSE' 2021-07-15T16:14:25,530 writing manifest file '/tmp/pip-pip-egg-info-0tvbk0cu/bx_python.egg-info/SOURCES.txt' 2021-07-15T16:14:25,640 Source in /tmp/pip-wheel-ytvbu3c2/bx-python_c16b3379844b4731bed2abf47c378b84 has version 0.8.7, which satisfies requirement bx-python==0.8.7 from https://files.pythonhosted.org/packages/68/90/d0e158fa1a50bd4907aeefcab424cc2acd6a46c2aafe78bad39cd2c6bdda/bx-python-0.8.7.tar.gz#sha256=10756beaf214146ed422db4bca3d56523680123105f5e0e6aab23a3786124e3b 2021-07-15T16:14:25,641 Removed bx-python==0.8.7 from https://files.pythonhosted.org/packages/68/90/d0e158fa1a50bd4907aeefcab424cc2acd6a46c2aafe78bad39cd2c6bdda/bx-python-0.8.7.tar.gz#sha256=10756beaf214146ed422db4bca3d56523680123105f5e0e6aab23a3786124e3b from build tracker '/tmp/pip-req-tracker-ldpb831k' 2021-07-15T16:14:25,650 Created temporary directory: /tmp/pip-unpack-mb1i0b6w 2021-07-15T16:14:25,651 Building wheels for collected packages: bx-python 2021-07-15T16:14:25,655 Created temporary directory: /tmp/pip-wheel-dvnq3fxl 2021-07-15T16:14:25,655 Building wheel for bx-python (setup.py): started 2021-07-15T16:14:25,656 Destination directory: /tmp/pip-wheel-dvnq3fxl 2021-07-15T16:14:25,656 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ytvbu3c2/bx-python_c16b3379844b4731bed2abf47c378b84/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ytvbu3c2/bx-python_c16b3379844b4731bed2abf47c378b84/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dvnq3fxl 2021-07-15T16:14:28,125 running bdist_wheel 2021-07-15T16:14:28,131 running build 2021-07-15T16:14:28,131 running build_py 2021-07-15T16:14:28,139 creating build 2021-07-15T16:14:28,139 creating build/lib.linux-armv7l-3.9 2021-07-15T16:14:28,140 copying lib/psyco_full.py -> build/lib.linux-armv7l-3.9 2021-07-15T16:14:28,144 creating build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,144 copying lib/bx/bitset_builders.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,147 copying lib/bx/filter.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,149 copying lib/bx/__init__.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,150 copying lib/bx/binned_array.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,153 copying lib/bx/interval_index_file.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,156 copying lib/bx/bitset_utils.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,158 copying lib/bx/bitset_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,160 copying lib/bx/interval_index_file_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,161 copying lib/bx/seqmapping_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,163 copying lib/bx/wiggle_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,166 copying lib/bx/gene_reader.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,168 copying lib/bx/binned_array_tests.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,170 copying lib/bx/wiggle.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,172 copying lib/bx/seqmapping.py -> build/lib.linux-armv7l-3.9/bx 2021-07-15T16:14:28,175 creating build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,176 copying lib/bx_extras/__init__.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,178 copying lib/bx_extras/stats.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,186 copying lib/bx_extras/lrucache.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,188 copying lib/bx_extras/pstat.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,192 copying lib/bx_extras/fpconst_tests.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,193 copying lib/bx_extras/pyparsing.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,202 copying lib/bx_extras/fpconst.py -> build/lib.linux-armv7l-3.9/bx_extras 2021-07-15T16:14:28,206 creating build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,206 copying lib/bx/misc/seeklzop.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,209 copying lib/bx/misc/filecache_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,211 copying lib/bx/misc/__init__.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,212 copying lib/bx/misc/cdb.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,215 copying lib/bx/misc/seekbzip2_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,216 copying lib/bx/misc/seeklzop_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,218 copying lib/bx/misc/filecache.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,220 copying lib/bx/misc/bgzf_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,222 copying lib/bx/misc/seekbzip2.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,224 copying lib/bx/misc/readlengths.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,226 copying lib/bx/misc/binary_file.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,228 copying lib/bx/misc/cdb_tests.py -> build/lib.linux-armv7l-3.9/bx/misc 2021-07-15T16:14:28,231 creating build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,232 copying lib/bx/seq/qdna_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,234 copying lib/bx/seq/__init__.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,236 copying lib/bx/seq/core.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,237 copying lib/bx/seq/twobit_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,239 copying lib/bx/seq/seq_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,241 copying lib/bx/seq/qdna.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,244 copying lib/bx/seq/fasta_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,246 copying lib/bx/seq/seq.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,248 copying lib/bx/seq/nib_tests.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,250 copying lib/bx/seq/nib.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,252 copying lib/bx/seq/fasta.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,254 copying lib/bx/seq/twobit.py -> build/lib.linux-armv7l-3.9/bx/seq 2021-07-15T16:14:28,256 creating build/lib.linux-armv7l-3.9/bx/intseq 2021-07-15T16:14:28,257 copying lib/bx/intseq/__init__.py -> build/lib.linux-armv7l-3.9/bx/intseq 2021-07-15T16:14:28,260 creating build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T16:14:28,261 copying lib/bx/phylo/__init__.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T16:14:28,263 copying lib/bx/phylo/phast_tests.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T16:14:28,265 copying lib/bx/phylo/newick_tests.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T16:14:28,267 copying lib/bx/phylo/newick.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T16:14:28,269 copying lib/bx/phylo/phast.py -> build/lib.linux-armv7l-3.9/bx/phylo 2021-07-15T16:14:28,272 creating build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T16:14:28,272 copying lib/bx/motif/pwm_tests.py -> build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T16:14:28,274 copying lib/bx/motif/__init__.py -> build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T16:14:28,276 copying lib/bx/motif/pwm.py -> build/lib.linux-armv7l-3.9/bx/motif 2021-07-15T16:14:28,279 creating build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,280 copying lib/bx/pwm/bed_score_aligned_pwm.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,282 copying lib/bx/pwm/pwm_tests.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,284 copying lib/bx/pwm/bed_score_aligned_string.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,286 copying lib/bx/pwm/__init__.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,297 copying lib/bx/pwm/pwm_score_motifs.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,311 copying lib/bx/pwm/pwm_score_positions.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,314 copying lib/bx/pwm/position_weight_matrix.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,334 copying lib/bx/pwm/maf_select_motifs.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,337 copying lib/bx/pwm/pwm_score_maf.py -> build/lib.linux-armv7l-3.9/bx/pwm 2021-07-15T16:14:28,341 creating build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T16:14:28,342 copying lib/bx/intervals/random_intervals.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T16:14:28,345 copying lib/bx/intervals/__init__.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T16:14:28,347 copying lib/bx/intervals/cluster_tests.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T16:14:28,350 copying lib/bx/intervals/io.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T16:14:28,353 copying lib/bx/intervals/intersection_tests.py -> build/lib.linux-armv7l-3.9/bx/intervals 2021-07-15T16:14:28,356 creating build/lib.linux-armv7l-3.9/bx/tabular 2021-07-15T16:14:28,357 copying lib/bx/tabular/__init__.py -> build/lib.linux-armv7l-3.9/bx/tabular 2021-07-15T16:14:28,359 copying lib/bx/tabular/io.py -> build/lib.linux-armv7l-3.9/bx/tabular 2021-07-15T16:14:28,362 creating build/lib.linux-armv7l-3.9/bx/bbi 2021-07-15T16:14:28,363 copying lib/bx/bbi/bigwig_tests.py -> build/lib.linux-armv7l-3.9/bx/bbi 2021-07-15T16:14:28,365 copying lib/bx/bbi/__init__.py -> build/lib.linux-armv7l-3.9/bx/bbi 2021-07-15T16:14:28,369 creating build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,370 copying lib/bx/align/maf_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,372 copying lib/bx/align/__init__.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,374 copying lib/bx/align/core.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,377 copying lib/bx/align/lav_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,379 copying lib/bx/align/score_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,381 copying lib/bx/align/score.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,383 copying lib/bx/align/maf.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,386 copying lib/bx/align/lav.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,388 copying lib/bx/align/epo_tests.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,391 copying lib/bx/align/epo.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,393 copying lib/bx/align/axt.py -> build/lib.linux-armv7l-3.9/bx/align 2021-07-15T16:14:28,398 creating build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T16:14:28,399 copying lib/bx/cookbook/__init__.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T16:14:28,401 copying lib/bx/cookbook/progress_bar.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T16:14:28,403 copying lib/bx/cookbook/argparse.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T16:14:28,408 copying lib/bx/cookbook/attribute.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T16:14:28,410 copying lib/bx/cookbook/doc_optparse.py -> build/lib.linux-armv7l-3.9/bx/cookbook 2021-07-15T16:14:28,412 creating build/lib.linux-armv7l-3.9/bx/arrays 2021-07-15T16:14:28,413 copying lib/bx/arrays/__init__.py -> build/lib.linux-armv7l-3.9/bx/arrays 2021-07-15T16:14:28,415 copying lib/bx/arrays/array_tree_tests.py -> build/lib.linux-armv7l-3.9/bx/arrays 2021-07-15T16:14:28,417 creating build/lib.linux-armv7l-3.9/bx/motif/logo 2021-07-15T16:14:28,418 copying lib/bx/motif/logo/__init__.py -> build/lib.linux-armv7l-3.9/bx/motif/logo 2021-07-15T16:14:28,421 creating build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T16:14:28,422 copying lib/bx/motif/io/__init__.py -> build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T16:14:28,423 copying lib/bx/motif/io/transfac.py -> build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T16:14:28,426 copying lib/bx/motif/io/transfac_tests.py -> build/lib.linux-armv7l-3.9/bx/motif/io 2021-07-15T16:14:28,429 creating build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,429 copying lib/bx/intervals/operations/subtract.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,432 copying lib/bx/intervals/operations/merge.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,433 copying lib/bx/intervals/operations/concat.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,435 copying lib/bx/intervals/operations/__init__.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,437 copying lib/bx/intervals/operations/complement.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,439 copying lib/bx/intervals/operations/intersect.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,440 copying lib/bx/intervals/operations/coverage.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,442 copying lib/bx/intervals/operations/join.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,444 copying lib/bx/intervals/operations/base_coverage.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,446 copying lib/bx/intervals/operations/quicksect.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,448 copying lib/bx/intervals/operations/find_clusters.py -> build/lib.linux-armv7l-3.9/bx/intervals/operations 2021-07-15T16:14:28,452 creating build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T16:14:28,453 copying lib/bx/align/sitemask/quality.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T16:14:28,455 copying lib/bx/align/sitemask/__init__.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T16:14:28,457 copying lib/bx/align/sitemask/core.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T16:14:28,459 copying lib/bx/align/sitemask/cpg.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T16:14:28,461 copying lib/bx/align/sitemask/sitemask_tests.py -> build/lib.linux-armv7l-3.9/bx/align/sitemask 2021-07-15T16:14:28,463 creating build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T16:14:28,464 copying lib/bx/align/tools/tile.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T16:14:28,466 copying lib/bx/align/tools/thread.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T16:14:28,468 copying lib/bx/align/tools/__init__.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T16:14:28,470 copying lib/bx/align/tools/fuse.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T16:14:28,472 copying lib/bx/align/tools/chop.py -> build/lib.linux-armv7l-3.9/bx/align/tools 2021-07-15T16:14:28,474 copying lib/bx/motif/logo/template.ps -> build/lib.linux-armv7l-3.9/bx/motif/logo 2021-07-15T16:14:28,630 Skipping optional fixer: buffer 2021-07-15T16:14:28,720 Skipping optional fixer: idioms 2021-07-15T16:14:28,933 Skipping optional fixer: set_literal 2021-07-15T16:14:29,076 Skipping optional fixer: ws_comma 2021-07-15T16:14:51,931 running build_ext 2021-07-15T16:14:51,997 skipping 'lib/bx/bitset.c' Cython extension (up-to-date) 2021-07-15T16:14:51,998 skipping 'lib/bx/intervals/intersection.c' Cython extension (up-to-date) 2021-07-15T16:14:51,999 skipping 'lib/bx/align/_core.c' Cython extension (up-to-date) 2021-07-15T16:14:52,000 skipping 'lib/bx/seq/_nib.c' Cython extension (up-to-date) 2021-07-15T16:14:52,000 skipping 'lib/bx/seq/_twobit.c' Cython extension (up-to-date) 2021-07-15T16:14:52,001 skipping 'lib/bx/_seqmapping.c' Cython extension (up-to-date) 2021-07-15T16:14:52,002 skipping 'lib/bx/misc/bgzf.c' Cython extension (up-to-date) 2021-07-15T16:14:52,002 skipping 'lib/bx/intervals/cluster.c' Cython extension (up-to-date) 2021-07-15T16:14:52,003 skipping 'lib/bx/pwm/_position_weight_matrix.c' Cython extension (up-to-date) 2021-07-15T16:14:52,004 skipping 'lib/bx/motif/_pwm.c' Cython extension (up-to-date) 2021-07-15T16:14:52,005 skipping 'lib/bx/arrays/array_tree.c' Cython extension (up-to-date) 2021-07-15T16:14:52,005 skipping 'lib/bx/bbi/bpt_file.c' Cython extension (up-to-date) 2021-07-15T16:14:52,006 skipping 'lib/bx/bbi/cirtree_file.c' Cython extension (up-to-date) 2021-07-15T16:14:52,007 skipping 'lib/bx/bbi/bbi_file.c' Cython extension (up-to-date) 2021-07-15T16:14:52,008 skipping 'lib/bx/bbi/bigwig_file.c' Cython extension (up-to-date) 2021-07-15T16:14:52,008 skipping 'lib/bx/bbi/bigbed_file.c' Cython extension (up-to-date) 2021-07-15T16:14:52,009 skipping 'lib/bx/align/_epo.c' Cython extension (up-to-date) 2021-07-15T16:14:52,010 skipping 'lib/bx/arrays/bed.c' Cython extension (up-to-date) 2021-07-15T16:14:52,011 skipping 'lib/bx/arrays/wiggle.c' Cython extension (up-to-date) 2021-07-15T16:14:52,011 skipping 'lib/bx/align/sitemask/_cpg.c' Cython extension (up-to-date) 2021-07-15T16:14:52,012 skipping 'lib/bx/intseq/ngramcount.c' Cython extension (up-to-date) 2021-07-15T16:14:52,013 skipping 'lib/bx/misc/_seekbzip2.c' Cython extension (up-to-date) 2021-07-15T16:14:52,013 building 'bx.bitset' extension 2021-07-15T16:14:52,014 creating build/temp.linux-armv7l-3.9 2021-07-15T16:14:52,014 creating build/temp.linux-armv7l-3.9/lib 2021-07-15T16:14:52,015 creating build/temp.linux-armv7l-3.9/lib/bx 2021-07-15T16:14:52,016 creating build/temp.linux-armv7l-3.9/src 2021-07-15T16:14:52,017 creating build/temp.linux-armv7l-3.9/src/kent 2021-07-15T16:14:52,017 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c lib/bx/bitset.c -o build/temp.linux-armv7l-3.9/lib/bx/bitset.o 2021-07-15T16:14:52,543 lib/bx/bitset.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:14:52,546 lib/bx/bitset.c:6775:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,546 6775 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,546 | ^ 2021-07-15T16:14:52,562 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,562 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,562 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,562 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,562 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,562 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,568 lib/bx/bitset.c:6775:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,568 6775 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,568 | ^ 2021-07-15T16:14:52,568 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,568 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,569 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,569 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:52,569 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:52,569 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,574 lib/bx/bitset.c:6775:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,574 6775 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,575 | ^ 2021-07-15T16:14:52,575 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,575 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,575 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,575 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,576 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,576 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,581 lib/bx/bitset.c:6775:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,581 6775 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,581 | ^ 2021-07-15T16:14:52,581 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,581 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,582 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,582 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,582 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,582 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,586 lib/bx/bitset.c:6775:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,586 6775 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,586 | ^ 2021-07-15T16:14:52,587 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,587 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,587 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,587 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:52,587 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:52,587 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,590 lib/bx/bitset.c:6775:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,590 6775 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,590 | ^ 2021-07-15T16:14:52,591 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,591 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,591 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,591 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,591 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,591 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,595 lib/bx/bitset.c:6791:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,595 6791 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,595 | ^ 2021-07-15T16:14:52,596 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,596 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,596 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,596 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,596 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,596 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,599 lib/bx/bitset.c:6791:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,599 6791 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,599 | ^ 2021-07-15T16:14:52,599 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,600 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,600 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,600 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:52,600 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:52,600 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,603 lib/bx/bitset.c:6791:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,603 6791 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,603 | ^ 2021-07-15T16:14:52,603 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,604 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,604 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,604 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,604 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,604 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,607 lib/bx/bitset.c:6791:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,607 6791 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,607 | ^ 2021-07-15T16:14:52,607 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,607 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,608 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,608 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,608 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,608 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,611 lib/bx/bitset.c:6791:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,611 6791 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,611 | ^ 2021-07-15T16:14:52,611 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,611 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,611 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,612 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:52,612 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:52,612 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:52,615 lib/bx/bitset.c:6791:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:52,615 6791 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:52,615 | ^ 2021-07-15T16:14:52,615 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:52,615 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:52,616 from lib/bx/bitset.c:4: 2021-07-15T16:14:52,616 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:52,616 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:52,616 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:57,578 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c src/binBits.c -o build/temp.linux-armv7l-3.9/src/binBits.o 2021-07-15T16:14:58,008 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c src/kent/bits.c -o build/temp.linux-armv7l-3.9/src/kent/bits.o 2021-07-15T16:14:58,166 src/kent/bits.c:9:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 2021-07-15T16:14:58,166 9 | static char const rcsid[] = "$Id: bits.c,v 1.20 2008/03/25 16:32:31 angie Exp $"; 2021-07-15T16:14:58,166 | ^~~~~ 2021-07-15T16:14:58,446 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.9 -c src/kent/common.c -o build/temp.linux-armv7l-3.9/src/kent/common.o 2021-07-15T16:14:58,669 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bitset.o build/temp.linux-armv7l-3.9/src/binBits.o build/temp.linux-armv7l-3.9/src/kent/bits.o build/temp.linux-armv7l-3.9/src/kent/common.o -o build/lib.linux-armv7l-3.9/bx/bitset.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:14:58,816 building 'bx.intervals.intersection' extension 2021-07-15T16:14:58,816 creating build/temp.linux-armv7l-3.9/lib/bx/intervals 2021-07-15T16:14:58,817 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/intervals/intersection.c -o build/temp.linux-armv7l-3.9/lib/bx/intervals/intersection.o 2021-07-15T16:14:59,372 lib/bx/intervals/intersection.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:14:59,377 lib/bx/intervals/intersection.c:10396:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,377 10396 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,377 | ^ 2021-07-15T16:14:59,378 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,379 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,379 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,379 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,379 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,379 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,385 lib/bx/intervals/intersection.c:10396:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,386 10396 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,386 | ^ 2021-07-15T16:14:59,386 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,386 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,386 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,386 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:59,386 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:59,387 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,392 lib/bx/intervals/intersection.c:10396:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,392 10396 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,392 | ^ 2021-07-15T16:14:59,392 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,392 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,392 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,393 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,393 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,393 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,398 lib/bx/intervals/intersection.c:10396:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,398 10396 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,398 | ^ 2021-07-15T16:14:59,398 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,399 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,399 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,399 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,399 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,399 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,404 lib/bx/intervals/intersection.c:10396:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,404 10396 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,405 | ^ 2021-07-15T16:14:59,405 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,405 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,405 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,405 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:59,405 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:59,405 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,410 lib/bx/intervals/intersection.c:10396:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,411 10396 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,411 | ^ 2021-07-15T16:14:59,411 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,411 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,411 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,411 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,412 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,412 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,418 lib/bx/intervals/intersection.c:10412:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,418 10412 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,419 | ^ 2021-07-15T16:14:59,419 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,419 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,419 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,419 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,419 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,419 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,424 lib/bx/intervals/intersection.c:10412:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,425 10412 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,425 | ^ 2021-07-15T16:14:59,425 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,425 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,425 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,425 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:59,425 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:59,426 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,431 lib/bx/intervals/intersection.c:10412:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,431 10412 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,431 | ^ 2021-07-15T16:14:59,431 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,431 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,432 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,432 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,432 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,432 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,437 lib/bx/intervals/intersection.c:10412:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,437 10412 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,437 | ^ 2021-07-15T16:14:59,438 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,438 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,438 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,438 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,438 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,438 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,443 lib/bx/intervals/intersection.c:10412:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,444 10412 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,444 | ^ 2021-07-15T16:14:59,444 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,444 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,444 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,444 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:14:59,444 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:14:59,444 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:14:59,450 lib/bx/intervals/intersection.c:10412:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:14:59,450 10412 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:14:59,450 | ^ 2021-07-15T16:14:59,450 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:14:59,450 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:14:59,450 from lib/bx/intervals/intersection.c:4: 2021-07-15T16:14:59,450 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:14:59,451 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:14:59,451 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,175 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/intervals/intersection.o -o build/lib.linux-armv7l-3.9/bx/intervals/intersection.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:08,349 building 'bx.align._core' extension 2021-07-15T16:15:08,350 creating build/temp.linux-armv7l-3.9/lib/bx/align 2021-07-15T16:15:08,350 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/align/_core.c -o build/temp.linux-armv7l-3.9/lib/bx/align/_core.o 2021-07-15T16:15:08,727 lib/bx/align/_core.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:08,728 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,728 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,728 | ^ 2021-07-15T16:15:08,729 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,729 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,729 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,729 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,730 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,730 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,731 lib/bx/align/_core.c:1729:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,731 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,731 | ^ 2021-07-15T16:15:08,731 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,731 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,731 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,732 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:08,732 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:08,732 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,733 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,733 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,733 | ^ 2021-07-15T16:15:08,733 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,733 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,734 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,734 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,734 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,734 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,735 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,735 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,735 | ^ 2021-07-15T16:15:08,735 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,736 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,736 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,736 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,736 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,736 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,737 lib/bx/align/_core.c:1729:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,737 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,737 | ^ 2021-07-15T16:15:08,737 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,738 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,738 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,738 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:08,738 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:08,738 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,739 lib/bx/align/_core.c:1729:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,739 1729 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,739 | ^ 2021-07-15T16:15:08,739 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,740 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,740 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,740 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,740 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,740 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,742 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,742 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,742 | ^ 2021-07-15T16:15:08,742 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,742 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,742 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,743 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,743 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,743 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,744 lib/bx/align/_core.c:1745:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,744 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,744 | ^ 2021-07-15T16:15:08,744 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,744 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,744 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,745 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:08,745 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:08,745 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,746 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,746 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,746 | ^ 2021-07-15T16:15:08,746 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,746 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,746 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,747 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,747 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,747 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,748 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,748 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,748 | ^ 2021-07-15T16:15:08,748 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,748 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,749 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,749 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,749 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,749 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,750 lib/bx/align/_core.c:1745:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,750 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,750 | ^ 2021-07-15T16:15:08,750 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,750 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,751 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,751 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:08,751 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:08,751 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:08,752 lib/bx/align/_core.c:1745:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:08,752 1745 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:08,752 | ^ 2021-07-15T16:15:08,752 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:08,753 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:08,753 from lib/bx/align/_core.c:4: 2021-07-15T16:15:08,753 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:08,753 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:08,753 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:09,607 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/align/_core.o -o build/lib.linux-armv7l-3.9/bx/align/_core.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:09,716 building 'bx.seq._nib' extension 2021-07-15T16:15:09,717 creating build/temp.linux-armv7l-3.9/lib/bx/seq 2021-07-15T16:15:09,717 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/seq/_nib.c -o build/temp.linux-armv7l-3.9/lib/bx/seq/_nib.o 2021-07-15T16:15:10,098 lib/bx/seq/_nib.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:10,099 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,099 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,099 | ^ 2021-07-15T16:15:10,100 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,100 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,100 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,101 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,101 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,101 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,102 lib/bx/seq/_nib.c:2041:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,102 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,102 | ^ 2021-07-15T16:15:10,103 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,103 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,103 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,103 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:10,103 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:10,103 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,105 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,105 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,105 | ^ 2021-07-15T16:15:10,105 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,105 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,105 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,106 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,106 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,106 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,107 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,107 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,107 | ^ 2021-07-15T16:15:10,108 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,108 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,108 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,108 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,108 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,108 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,110 lib/bx/seq/_nib.c:2041:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,110 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,110 | ^ 2021-07-15T16:15:10,110 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,110 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,110 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,111 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:10,111 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:10,111 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,112 lib/bx/seq/_nib.c:2041:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,112 2041 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,112 | ^ 2021-07-15T16:15:10,112 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,113 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,113 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,113 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,113 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,113 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,115 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,115 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,115 | ^ 2021-07-15T16:15:10,115 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,116 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,116 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,116 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,116 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,116 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,117 lib/bx/seq/_nib.c:2057:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,117 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,117 | ^ 2021-07-15T16:15:10,118 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,118 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,118 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,118 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:10,118 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:10,118 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,119 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,120 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,120 | ^ 2021-07-15T16:15:10,120 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,120 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,120 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,120 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,120 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,121 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,122 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,122 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,122 | ^ 2021-07-15T16:15:10,122 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,122 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,122 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,122 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,122 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,123 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,123 lib/bx/seq/_nib.c:2057:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,123 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,123 | ^ 2021-07-15T16:15:10,123 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,123 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,123 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,123 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:10,123 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:10,124 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:10,124 lib/bx/seq/_nib.c:2057:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:10,124 2057 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:10,124 | ^ 2021-07-15T16:15:10,124 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:10,124 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:10,124 from lib/bx/seq/_nib.c:4: 2021-07-15T16:15:10,124 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:10,125 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:10,125 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,303 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/seq/_nib.o -o build/lib.linux-armv7l-3.9/bx/seq/_nib.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:11,417 building 'bx.seq._twobit' extension 2021-07-15T16:15:11,417 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/seq/_twobit.c -o build/temp.linux-armv7l-3.9/lib/bx/seq/_twobit.o 2021-07-15T16:15:11,829 lib/bx/seq/_twobit.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:11,831 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,831 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,831 | ^ 2021-07-15T16:15:11,831 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,831 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,832 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,832 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,832 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,832 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,833 lib/bx/seq/_twobit.c:3212:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,833 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,833 | ^ 2021-07-15T16:15:11,833 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,834 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,834 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,834 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:11,834 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:11,834 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,835 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,835 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,835 | ^ 2021-07-15T16:15:11,835 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,835 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,835 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,836 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,836 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,836 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,837 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,837 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,837 | ^ 2021-07-15T16:15:11,837 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,837 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,837 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,837 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,837 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,838 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,838 lib/bx/seq/_twobit.c:3212:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,838 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,839 | ^ 2021-07-15T16:15:11,839 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,839 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,839 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,839 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:11,839 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:11,839 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,840 lib/bx/seq/_twobit.c:3212:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,840 3212 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,840 | ^ 2021-07-15T16:15:11,841 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,841 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,841 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,841 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,841 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,841 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,843 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,843 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,843 | ^ 2021-07-15T16:15:11,843 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,843 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,843 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,843 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,843 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,844 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,844 lib/bx/seq/_twobit.c:3228:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,844 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,845 | ^ 2021-07-15T16:15:11,845 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,845 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,845 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,845 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:11,845 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:11,845 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,846 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,846 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,846 | ^ 2021-07-15T16:15:11,847 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,847 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,847 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,847 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,847 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,847 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,848 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,848 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,848 | ^ 2021-07-15T16:15:11,848 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,848 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,849 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,849 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,849 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,849 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,850 lib/bx/seq/_twobit.c:3228:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,850 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,850 | ^ 2021-07-15T16:15:11,850 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,850 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,850 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,850 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:11,851 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:11,851 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:11,851 lib/bx/seq/_twobit.c:3228:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:11,852 3228 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:11,852 | ^ 2021-07-15T16:15:11,852 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:11,852 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:11,852 from lib/bx/seq/_twobit.c:4: 2021-07-15T16:15:11,852 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:11,852 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:11,852 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:14,700 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/seq/_twobit.o -o build/lib.linux-armv7l-3.9/bx/seq/_twobit.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:14,825 building 'bx._seqmapping' extension 2021-07-15T16:15:14,825 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/_seqmapping.c -o build/temp.linux-armv7l-3.9/lib/bx/_seqmapping.o 2021-07-15T16:15:15,209 lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_21CharToIntArrayMapping_6translate’: 2021-07-15T16:15:15,210 lib/bx/_seqmapping.c:1762:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,210 1762 | __pyx_t_1 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 52, __pyx_L1_error) 2021-07-15T16:15:15,210 | ^~~~~~~~~ 2021-07-15T16:15:15,211 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T16:15:15,211 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,211 /usr/include/python3.9/abstract.h:354:17: note: declared here 2021-07-15T16:15:15,211 354 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, 2021-07-15T16:15:15,211 | ^~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,215 lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_21CharToIntArrayMapping_8translate_list’: 2021-07-15T16:15:15,216 lib/bx/_seqmapping.c:1962:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,216 1962 | __pyx_t_7 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_7 == ((int)-1))) __PYX_ERR(0, 75, __pyx_L1_error) 2021-07-15T16:15:15,216 | ^~~~~~~~~ 2021-07-15T16:15:15,216 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T16:15:15,216 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,216 /usr/include/python3.9/abstract.h:354:17: note: declared here 2021-07-15T16:15:15,217 354 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, 2021-07-15T16:15:15,217 | ^~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,234 lib/bx/_seqmapping.c: In function ‘__pyx_pf_2bx_11_seqmapping_15IntToIntMapping_6translate’: 2021-07-15T16:15:15,235 lib/bx/_seqmapping.c:3007:3: warning: ‘PyObject_AsReadBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,235 3007 | __pyx_t_1 = PyObject_AsReadBuffer(__pyx_v_src, ((void const **)(&__pyx_v_s_buf)), (&__pyx_v_s_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 132, __pyx_L1_error) 2021-07-15T16:15:15,236 | ^~~~~~~~~ 2021-07-15T16:15:15,236 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T16:15:15,236 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,236 /usr/include/python3.9/abstract.h:343:17: note: declared here 2021-07-15T16:15:15,236 343 | PyAPI_FUNC(int) PyObject_AsReadBuffer(PyObject *obj, 2021-07-15T16:15:15,236 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,240 lib/bx/_seqmapping.c:3108:3: warning: ‘PyObject_AsWriteBuffer’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,240 3108 | __pyx_t_1 = PyObject_AsWriteBuffer(__pyx_v_rval, ((void **)(&__pyx_v_t_buf)), (&__pyx_v_t_len)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 137, __pyx_L1_error) 2021-07-15T16:15:15,241 | ^~~~~~~~~ 2021-07-15T16:15:15,241 In file included from /usr/include/python3.9/Python.h:151, 2021-07-15T16:15:15,241 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,241 /usr/include/python3.9/abstract.h:354:17: note: declared here 2021-07-15T16:15:15,241 354 | PyAPI_FUNC(int) PyObject_AsWriteBuffer(PyObject *obj, 2021-07-15T16:15:15,241 | ^~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,306 lib/bx/_seqmapping.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:15,309 lib/bx/_seqmapping.c:5720:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,310 5720 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,310 | ^ 2021-07-15T16:15:15,310 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,310 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,310 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,311 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,311 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,311 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,314 lib/bx/_seqmapping.c:5720:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,315 5720 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,315 | ^ 2021-07-15T16:15:15,315 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,315 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,315 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,315 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:15,315 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:15,315 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,319 lib/bx/_seqmapping.c:5720:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,319 5720 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,319 | ^ 2021-07-15T16:15:15,319 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,319 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,319 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,320 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,320 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,320 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,323 lib/bx/_seqmapping.c:5720:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,323 5720 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,323 | ^ 2021-07-15T16:15:15,324 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,324 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,324 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,324 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,324 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,324 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,328 lib/bx/_seqmapping.c:5720:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,328 5720 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,328 | ^ 2021-07-15T16:15:15,328 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,328 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,328 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,328 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:15,328 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:15,329 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,332 lib/bx/_seqmapping.c:5720:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,332 5720 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,332 | ^ 2021-07-15T16:15:15,332 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,333 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,333 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,333 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,333 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,333 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,337 lib/bx/_seqmapping.c:5736:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,338 5736 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,338 | ^ 2021-07-15T16:15:15,338 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,338 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,338 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,338 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,338 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,338 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,342 lib/bx/_seqmapping.c:5736:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,342 5736 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,342 | ^ 2021-07-15T16:15:15,342 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,342 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,342 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,343 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:15,343 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:15,343 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,346 lib/bx/_seqmapping.c:5736:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,346 5736 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,346 | ^ 2021-07-15T16:15:15,347 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,347 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,347 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,347 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,347 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,347 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,351 lib/bx/_seqmapping.c:5736:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,351 5736 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,351 | ^ 2021-07-15T16:15:15,351 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,351 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,351 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,351 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,352 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,352 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,355 lib/bx/_seqmapping.c:5736:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,355 5736 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,355 | ^ 2021-07-15T16:15:15,355 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,355 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,356 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,356 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:15,356 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:15,356 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:15,359 lib/bx/_seqmapping.c:5736:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:15,360 5736 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:15,360 | ^ 2021-07-15T16:15:15,360 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:15,360 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:15,360 from lib/bx/_seqmapping.c:4: 2021-07-15T16:15:15,360 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:15,360 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:15,360 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,368 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/_seqmapping.o -o build/lib.linux-armv7l-3.9/bx/_seqmapping.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:20,500 building 'bx.misc.bgzf' extension 2021-07-15T16:15:20,500 creating build/temp.linux-armv7l-3.9/lib/bx/misc 2021-07-15T16:15:20,501 creating build/temp.linux-armv7l-3.9/src/samtools 2021-07-15T16:15:20,501 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/samtools -I/usr/include/python3.9 -c lib/bx/misc/bgzf.c -o build/temp.linux-armv7l-3.9/lib/bx/misc/bgzf.o 2021-07-15T16:15:20,912 lib/bx/misc/bgzf.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:20,913 lib/bx/misc/bgzf.c:2501:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,913 2501 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,914 | ^ 2021-07-15T16:15:20,914 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,914 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,914 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,914 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,914 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,914 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,915 lib/bx/misc/bgzf.c:2501:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,915 2501 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,915 | ^ 2021-07-15T16:15:20,916 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,916 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,916 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,916 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:20,916 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:20,916 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,917 lib/bx/misc/bgzf.c:2501:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,917 2501 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,917 | ^ 2021-07-15T16:15:20,917 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,917 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,917 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,917 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,917 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,918 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,918 lib/bx/misc/bgzf.c:2501:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,918 2501 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,918 | ^ 2021-07-15T16:15:20,918 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,918 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,919 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,919 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,919 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,919 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,919 lib/bx/misc/bgzf.c:2501:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,920 2501 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,920 | ^ 2021-07-15T16:15:20,920 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,920 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,920 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,920 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:20,920 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:20,921 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,921 lib/bx/misc/bgzf.c:2501:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,921 2501 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,921 | ^ 2021-07-15T16:15:20,921 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,921 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,922 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,922 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,922 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,922 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,923 lib/bx/misc/bgzf.c:2517:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,923 2517 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,923 | ^ 2021-07-15T16:15:20,923 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,923 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,924 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,924 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,924 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,924 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,924 lib/bx/misc/bgzf.c:2517:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,924 2517 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,924 | ^ 2021-07-15T16:15:20,925 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,925 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,925 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,925 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:20,925 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:20,925 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,925 lib/bx/misc/bgzf.c:2517:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,926 2517 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,926 | ^ 2021-07-15T16:15:20,926 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,926 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,926 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,926 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,926 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,926 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,927 lib/bx/misc/bgzf.c:2517:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,927 2517 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,927 | ^ 2021-07-15T16:15:20,927 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,927 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,927 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,927 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,928 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,928 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,928 lib/bx/misc/bgzf.c:2517:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,928 2517 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,928 | ^ 2021-07-15T16:15:20,928 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,929 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,929 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,929 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:20,929 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:20,929 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:20,929 lib/bx/misc/bgzf.c:2517:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:20,930 2517 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:20,930 | ^ 2021-07-15T16:15:20,930 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:20,930 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:20,930 from lib/bx/misc/bgzf.c:4: 2021-07-15T16:15:20,930 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:20,930 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:20,930 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:22,619 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/samtools -I/usr/include/python3.9 -c src/samtools/bgzf.c -o build/temp.linux-armv7l-3.9/src/samtools/bgzf.o 2021-07-15T16:15:22,782 src/samtools/bgzf.c: In function ‘cache_block’: 2021-07-15T16:15:22,783 src/samtools/bgzf.c:422:40: warning: comparison of integer expressions of different signedness: ‘khint_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-07-15T16:15:22,783 422 | if ((kh_size(h) + 1) * MAX_BLOCK_SIZE > fp->cache_size) { 2021-07-15T16:15:22,783 | ^ 2021-07-15T16:15:22,784 src/samtools/bgzf.c: In function ‘read_block’: 2021-07-15T16:15:22,784 src/samtools/bgzf.c:462:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2021-07-15T16:15:22,784 462 | if (count != sizeof(header)) { 2021-07-15T16:15:22,784 | ^~ 2021-07-15T16:15:22,786 src/samtools/bgzf.c: In function ‘bgzf_close’: 2021-07-15T16:15:22,786 src/samtools/bgzf.c:603:8: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 2021-07-15T16:15:22,787 603 | int count, block_length = deflate_block(fp, 0); 2021-07-15T16:15:22,787 | ^~~~~ 2021-07-15T16:15:23,466 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/misc/bgzf.o build/temp.linux-armv7l-3.9/src/samtools/bgzf.o -lz -o build/lib.linux-armv7l-3.9/bx/misc/bgzf.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:23,592 building 'bx.intervals.cluster' extension 2021-07-15T16:15:23,593 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c lib/bx/intervals/cluster.c -o build/temp.linux-armv7l-3.9/lib/bx/intervals/cluster.o 2021-07-15T16:15:23,982 lib/bx/intervals/cluster.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:23,983 lib/bx/intervals/cluster.c:2654:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,983 2654 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,984 | ^ 2021-07-15T16:15:23,984 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,984 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,984 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,984 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,984 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,984 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,985 lib/bx/intervals/cluster.c:2654:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,985 2654 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,985 | ^ 2021-07-15T16:15:23,986 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,986 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,986 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,986 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:23,986 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:23,986 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,987 lib/bx/intervals/cluster.c:2654:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,987 2654 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,987 | ^ 2021-07-15T16:15:23,987 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,987 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,987 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,987 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,987 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,987 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,988 lib/bx/intervals/cluster.c:2654:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,988 2654 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,988 | ^ 2021-07-15T16:15:23,988 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,988 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,989 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,989 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,989 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,989 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,989 lib/bx/intervals/cluster.c:2654:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,990 2654 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,990 | ^ 2021-07-15T16:15:23,990 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,990 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,990 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,990 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:23,990 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:23,990 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,991 lib/bx/intervals/cluster.c:2654:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,991 2654 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,991 | ^ 2021-07-15T16:15:23,991 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,991 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,992 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,992 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,992 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,992 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,993 lib/bx/intervals/cluster.c:2670:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,993 2670 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,993 | ^ 2021-07-15T16:15:23,993 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,993 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,994 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,994 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,994 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,994 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,994 lib/bx/intervals/cluster.c:2670:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,994 2670 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,995 | ^ 2021-07-15T16:15:23,995 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,995 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,995 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,995 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:23,995 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:23,995 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,996 lib/bx/intervals/cluster.c:2670:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,996 2670 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,996 | ^ 2021-07-15T16:15:23,996 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,996 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,996 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,997 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,997 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,997 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,997 lib/bx/intervals/cluster.c:2670:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,997 2670 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,997 | ^ 2021-07-15T16:15:23,998 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,998 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,998 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,998 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:23,998 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:23,998 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:23,999 lib/bx/intervals/cluster.c:2670:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:23,999 2670 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:23,999 | ^ 2021-07-15T16:15:23,999 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:23,999 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:23,999 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:23,999 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:23,999 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:24,000 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:24,000 lib/bx/intervals/cluster.c:2670:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:24,000 2670 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:24,000 | ^ 2021-07-15T16:15:24,001 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:24,001 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:24,001 from lib/bx/intervals/cluster.c:4: 2021-07-15T16:15:24,001 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:24,001 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:24,001 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:25,659 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c src/cluster.c -o build/temp.linux-armv7l-3.9/src/cluster.o 2021-07-15T16:15:26,168 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/intervals/cluster.o build/temp.linux-armv7l-3.9/src/cluster.o -o build/lib.linux-armv7l-3.9/bx/intervals/cluster.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:26,286 building 'bx.pwm._position_weight_matrix' extension 2021-07-15T16:15:26,287 creating build/temp.linux-armv7l-3.9/lib/bx/pwm 2021-07-15T16:15:26,287 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c lib/bx/pwm/_position_weight_matrix.c -o build/temp.linux-armv7l-3.9/lib/bx/pwm/_position_weight_matrix.o 2021-07-15T16:15:26,666 lib/bx/pwm/_position_weight_matrix.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:26,667 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,667 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,667 | ^ 2021-07-15T16:15:26,668 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,668 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,668 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,668 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,669 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,669 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,670 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,670 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,670 | ^ 2021-07-15T16:15:26,670 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,670 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,671 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,671 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:26,671 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:26,671 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,672 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,672 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,672 | ^ 2021-07-15T16:15:26,672 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,672 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,672 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,673 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,673 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,673 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,673 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,673 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,673 | ^ 2021-07-15T16:15:26,673 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,673 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,674 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,674 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,674 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,674 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,674 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,674 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,674 | ^ 2021-07-15T16:15:26,674 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,675 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,675 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,675 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:26,675 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:26,675 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,675 lib/bx/pwm/_position_weight_matrix.c:1669:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,675 1669 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,675 | ^ 2021-07-15T16:15:26,676 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,676 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,676 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,676 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,676 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,676 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,676 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,676 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,677 | ^ 2021-07-15T16:15:26,677 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,677 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,677 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,677 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,677 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,677 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,677 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,677 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,678 | ^ 2021-07-15T16:15:26,678 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,678 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,678 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,678 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:26,678 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:26,678 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,678 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,678 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,679 | ^ 2021-07-15T16:15:26,679 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,679 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,679 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,679 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,679 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,680 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,680 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,680 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,680 | ^ 2021-07-15T16:15:26,680 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,680 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,680 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,680 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,680 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,681 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,681 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,681 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,681 | ^ 2021-07-15T16:15:26,681 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,681 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,682 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,682 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:26,682 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:26,682 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:26,682 lib/bx/pwm/_position_weight_matrix.c:1685:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:26,682 1685 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:26,682 | ^ 2021-07-15T16:15:26,682 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:26,683 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:26,683 from lib/bx/pwm/_position_weight_matrix.c:4: 2021-07-15T16:15:26,683 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:26,683 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:26,683 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:27,535 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c src/pwm_utils.c -o build/temp.linux-armv7l-3.9/src/pwm_utils.o 2021-07-15T16:15:27,755 src/pwm_utils.c: In function ‘main’: 2021-07-15T16:15:27,755 src/pwm_utils.c:11:27: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 2021-07-15T16:15:27,756 11 | int string_size = strlen(argv[1]); 2021-07-15T16:15:27,756 | ^~~~~~ 2021-07-15T16:15:27,756 src/pwm_utils.c:11:27: warning: incompatible implicit declaration of built-in function ‘strlen’ 2021-07-15T16:15:27,757 src/pwm_utils.c:5:1: note: include ‘’ or provide a declaration of ‘strlen’ 2021-07-15T16:15:27,757 4 | #include 2021-07-15T16:15:27,757 +++ |+#include 2021-07-15T16:15:27,757 5 | 2021-07-15T16:15:27,758 src/pwm_utils.c:12:29: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T16:15:27,758 12 | if (strlen(argv[2]) != string_size) { 2021-07-15T16:15:27,758 | ^~ 2021-07-15T16:15:27,903 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/pwm/_position_weight_matrix.o build/temp.linux-armv7l-3.9/src/pwm_utils.o -o build/lib.linux-armv7l-3.9/bx/pwm/_position_weight_matrix.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:28,090 building 'bx.motif._pwm' extension 2021-07-15T16:15:28,091 creating build/temp.linux-armv7l-3.9/lib/bx/motif 2021-07-15T16:15:28,091 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/motif/_pwm.c -o build/temp.linux-armv7l-3.9/lib/bx/motif/_pwm.o 2021-07-15T16:15:28,745 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:15:28,746 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:15:28,746 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:15:28,746 from lib/bx/motif/_pwm.c:596: 2021-07-15T16:15:28,746 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:15:28,746 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:15:28,747 | ^~~~~~~ 2021-07-15T16:15:28,835 lib/bx/motif/_pwm.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:28,836 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,836 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,836 | ^ 2021-07-15T16:15:28,836 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,837 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,837 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,837 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,837 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,837 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,838 lib/bx/motif/_pwm.c:2443:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,838 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,838 | ^ 2021-07-15T16:15:28,838 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,839 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,839 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,839 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:28,839 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:28,839 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,840 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,840 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,840 | ^ 2021-07-15T16:15:28,840 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,840 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,840 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,840 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,841 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,841 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,841 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,842 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,842 | ^ 2021-07-15T16:15:28,842 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,842 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,842 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,842 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,842 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,842 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,843 lib/bx/motif/_pwm.c:2443:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,843 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,843 | ^ 2021-07-15T16:15:28,843 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,843 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,844 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,844 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:28,844 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:28,844 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,845 lib/bx/motif/_pwm.c:2443:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,845 2443 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,845 | ^ 2021-07-15T16:15:28,845 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,845 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,845 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,845 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,846 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,846 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,847 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,847 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,847 | ^ 2021-07-15T16:15:28,847 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,848 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,848 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,848 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,848 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,848 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,849 lib/bx/motif/_pwm.c:2459:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,849 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,849 | ^ 2021-07-15T16:15:28,849 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,849 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,849 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,849 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:28,850 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:28,850 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,850 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,851 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,851 | ^ 2021-07-15T16:15:28,851 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,851 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,851 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,851 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,851 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,851 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,852 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,852 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,852 | ^ 2021-07-15T16:15:28,853 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,853 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,853 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,853 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,853 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,853 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,854 lib/bx/motif/_pwm.c:2459:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,854 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,854 | ^ 2021-07-15T16:15:28,854 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,854 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,854 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,855 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:28,855 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:28,855 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,856 lib/bx/motif/_pwm.c:2459:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:28,856 2459 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:28,856 | ^ 2021-07-15T16:15:28,856 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:28,856 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:28,856 from lib/bx/motif/_pwm.c:4: 2021-07-15T16:15:28,856 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:28,856 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:28,857 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:28,930 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, 2021-07-15T16:15:28,930 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:15:28,930 from lib/bx/motif/_pwm.c:596: 2021-07-15T16:15:28,930 At top level: 2021-07-15T16:15:28,931 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/__multiarray_api.h:1464:1: warning: ‘_import_array’ defined but not used [-Wunused-function] 2021-07-15T16:15:28,931 1464 | _import_array(void) 2021-07-15T16:15:28,931 | ^~~~~~~~~~~~~ 2021-07-15T16:15:30,273 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/motif/_pwm.o -o build/lib.linux-armv7l-3.9/bx/motif/_pwm.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:30,387 building 'bx.arrays.array_tree' extension 2021-07-15T16:15:30,388 creating build/temp.linux-armv7l-3.9/lib/bx/arrays 2021-07-15T16:15:30,388 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/arrays/array_tree.c -o build/temp.linux-armv7l-3.9/lib/bx/arrays/array_tree.o 2021-07-15T16:15:30,761 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:15:30,761 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:15:30,761 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:15:30,761 from lib/bx/arrays/array_tree.c:598: 2021-07-15T16:15:30,761 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:15:30,761 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:15:30,761 | ^~~~~~~ 2021-07-15T16:15:31,316 lib/bx/arrays/array_tree.c: In function ‘__Pyx_import_all_from’: 2021-07-15T16:15:31,328 lib/bx/arrays/array_tree.c:21760:13: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,328 21760 | PyUnicode_AS_UNICODE(name)[0] == '_') 2021-07-15T16:15:31,328 | ^~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,329 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,329 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,329 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,329 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:31,330 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:31,330 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,470 lib/bx/arrays/array_tree.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:31,482 lib/bx/arrays/array_tree.c:23039:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,482 23039 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,483 | ^ 2021-07-15T16:15:31,483 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,483 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,483 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,483 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,483 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,483 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,498 lib/bx/arrays/array_tree.c:23039:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,498 23039 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,498 | ^ 2021-07-15T16:15:31,499 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,499 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,499 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,499 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:31,499 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:31,499 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,515 lib/bx/arrays/array_tree.c:23039:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,515 23039 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,515 | ^ 2021-07-15T16:15:31,515 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,515 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,515 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,516 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,516 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,516 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,533 lib/bx/arrays/array_tree.c:23039:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,533 23039 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,533 | ^ 2021-07-15T16:15:31,533 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,533 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,534 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,534 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,534 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,534 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,547 lib/bx/arrays/array_tree.c:23039:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,548 23039 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,548 | ^ 2021-07-15T16:15:31,548 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,548 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,548 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,548 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:31,548 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:31,548 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,562 lib/bx/arrays/array_tree.c:23039:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,562 23039 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,562 | ^ 2021-07-15T16:15:31,562 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,562 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,562 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,563 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,563 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,563 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,579 lib/bx/arrays/array_tree.c:23055:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,579 23055 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,579 | ^ 2021-07-15T16:15:31,580 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,580 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,580 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,580 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,580 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,580 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,593 lib/bx/arrays/array_tree.c:23055:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,594 23055 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,594 | ^ 2021-07-15T16:15:31,594 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,594 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,594 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,594 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:31,594 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:31,594 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,608 lib/bx/arrays/array_tree.c:23055:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,608 23055 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,608 | ^ 2021-07-15T16:15:31,608 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,608 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,608 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,608 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,609 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,609 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,622 lib/bx/arrays/array_tree.c:23055:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,622 23055 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,622 | ^ 2021-07-15T16:15:31,623 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,623 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,623 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,623 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,623 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,623 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,636 lib/bx/arrays/array_tree.c:23055:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,637 23055 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,637 | ^ 2021-07-15T16:15:31,637 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,637 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,637 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,637 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:31,637 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:31,638 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:31,651 lib/bx/arrays/array_tree.c:23055:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:31,651 23055 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:31,651 | ^ 2021-07-15T16:15:31,651 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:31,651 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:31,652 from lib/bx/arrays/array_tree.c:4: 2021-07-15T16:15:31,652 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:31,652 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:31,652 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,271 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/arrays/array_tree.o -o build/lib.linux-armv7l-3.9/bx/arrays/array_tree.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:15:56,480 building 'bx.bbi.bpt_file' extension 2021-07-15T16:15:56,481 creating build/temp.linux-armv7l-3.9/lib/bx/bbi 2021-07-15T16:15:56,481 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/bbi/bpt_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bpt_file.o 2021-07-15T16:15:56,869 lib/bx/bbi/bpt_file.c: In function ‘__pyx_pf_2bx_3bbi_8bpt_file_7BPTFile_6find’: 2021-07-15T16:15:56,870 lib/bx/bbi/bpt_file.c:2476:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T16:15:56,871 2476 | __pyx_t_2 = ((__pyx_t_1 > __pyx_v_self->key_size) != 0); 2021-07-15T16:15:56,871 | ^ 2021-07-15T16:15:56,872 lib/bx/bbi/bpt_file.c:2507:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T16:15:56,873 2507 | __pyx_t_2 = ((__pyx_t_1 < __pyx_v_self->key_size) != 0); 2021-07-15T16:15:56,873 | ^ 2021-07-15T16:15:56,918 lib/bx/bbi/bpt_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:15:56,920 lib/bx/bbi/bpt_file.c:4093:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,920 4093 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,920 | ^ 2021-07-15T16:15:56,921 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,921 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,921 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,921 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,922 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,922 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,924 lib/bx/bbi/bpt_file.c:4093:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,924 4093 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,925 | ^ 2021-07-15T16:15:56,925 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,925 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,925 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,925 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:56,925 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:56,925 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,928 lib/bx/bbi/bpt_file.c:4093:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,928 4093 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,928 | ^ 2021-07-15T16:15:56,928 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,928 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,929 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,929 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,929 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,929 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,931 lib/bx/bbi/bpt_file.c:4093:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,932 4093 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,932 | ^ 2021-07-15T16:15:56,932 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,932 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,932 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,932 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,933 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,933 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,935 lib/bx/bbi/bpt_file.c:4093:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,935 4093 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,935 | ^ 2021-07-15T16:15:56,936 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,936 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,936 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,936 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:56,936 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:56,936 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,939 lib/bx/bbi/bpt_file.c:4093:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,939 4093 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,939 | ^ 2021-07-15T16:15:56,939 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,939 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,939 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,940 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,940 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,940 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,943 lib/bx/bbi/bpt_file.c:4109:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,943 4109 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,943 | ^ 2021-07-15T16:15:56,944 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,944 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,944 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,944 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,944 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,944 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,947 lib/bx/bbi/bpt_file.c:4109:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,947 4109 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,947 | ^ 2021-07-15T16:15:56,947 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,947 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,947 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,948 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:56,948 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:56,948 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,950 lib/bx/bbi/bpt_file.c:4109:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,950 4109 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,951 | ^ 2021-07-15T16:15:56,951 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,951 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,951 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,951 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,951 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,951 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,954 lib/bx/bbi/bpt_file.c:4109:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,954 4109 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,954 | ^ 2021-07-15T16:15:56,954 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,955 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,955 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,955 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,955 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,955 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,957 lib/bx/bbi/bpt_file.c:4109:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,958 4109 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,958 | ^ 2021-07-15T16:15:56,958 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,958 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,958 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,958 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:15:56,958 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:15:56,958 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:15:56,961 lib/bx/bbi/bpt_file.c:4109:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:15:56,961 4109 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:15:56,961 | ^ 2021-07-15T16:15:56,962 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:15:56,962 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:15:56,962 from lib/bx/bbi/bpt_file.c:4: 2021-07-15T16:15:56,962 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:15:56,962 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:15:56,962 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:02,376 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bpt_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bpt_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:16:02,505 building 'bx.bbi.cirtree_file' extension 2021-07-15T16:16:02,505 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/bbi/cirtree_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/cirtree_file.o 2021-07-15T16:16:02,983 lib/bx/bbi/cirtree_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:16:02,986 lib/bx/bbi/cirtree_file.c:5469:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:02,986 5469 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:02,986 | ^ 2021-07-15T16:16:02,986 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:02,986 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:02,987 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:02,987 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:02,987 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:02,987 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:02,990 lib/bx/bbi/cirtree_file.c:5469:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:02,990 5469 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:02,990 | ^ 2021-07-15T16:16:02,990 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:02,990 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:02,990 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:02,990 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:02,991 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:02,991 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:02,993 lib/bx/bbi/cirtree_file.c:5469:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:02,993 5469 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:02,993 | ^ 2021-07-15T16:16:02,993 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:02,993 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:02,994 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:02,994 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:02,994 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:02,994 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:02,996 lib/bx/bbi/cirtree_file.c:5469:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:02,996 5469 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:02,997 | ^ 2021-07-15T16:16:02,997 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:02,997 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:02,997 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:02,997 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:02,997 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:02,997 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,000 lib/bx/bbi/cirtree_file.c:5469:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,000 5469 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,000 | ^ 2021-07-15T16:16:03,000 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,000 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,000 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,000 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:03,000 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:03,001 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,003 lib/bx/bbi/cirtree_file.c:5469:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,003 5469 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,003 | ^ 2021-07-15T16:16:03,003 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,003 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,004 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,004 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:03,004 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:03,004 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,007 lib/bx/bbi/cirtree_file.c:5485:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,007 5485 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,007 | ^ 2021-07-15T16:16:03,008 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,008 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,008 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,008 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:03,008 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:03,008 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,010 lib/bx/bbi/cirtree_file.c:5485:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,011 5485 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,011 | ^ 2021-07-15T16:16:03,011 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,011 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,011 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,011 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:03,011 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:03,011 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,014 lib/bx/bbi/cirtree_file.c:5485:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,014 5485 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,014 | ^ 2021-07-15T16:16:03,014 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,014 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,014 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,014 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:03,015 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:03,015 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,017 lib/bx/bbi/cirtree_file.c:5485:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,017 5485 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,017 | ^ 2021-07-15T16:16:03,017 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,017 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,018 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,018 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:03,018 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:03,018 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,020 lib/bx/bbi/cirtree_file.c:5485:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,020 5485 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,021 | ^ 2021-07-15T16:16:03,021 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,021 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,021 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,021 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:03,021 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:03,021 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:03,023 lib/bx/bbi/cirtree_file.c:5485:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:03,024 5485 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:03,024 | ^ 2021-07-15T16:16:03,024 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:03,024 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:03,024 from lib/bx/bbi/cirtree_file.c:4: 2021-07-15T16:16:03,024 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:03,024 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:03,025 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:12,250 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/cirtree_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/cirtree_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:16:12,392 building 'bx.bbi.bbi_file' extension 2021-07-15T16:16:12,393 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/bbi/bbi_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bbi_file.o 2021-07-15T16:16:12,770 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:16:12,770 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:16:12,770 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:16:12,770 from lib/bx/bbi/bbi_file.c:598: 2021-07-15T16:16:12,771 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:16:12,771 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:16:12,771 | ^~~~~~~ 2021-07-15T16:16:13,420 lib/bx/bbi/bbi_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:16:13,433 lib/bx/bbi/bbi_file.c:19545:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,434 19545 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,434 | ^ 2021-07-15T16:16:13,434 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,434 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,434 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,434 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,435 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,435 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,451 lib/bx/bbi/bbi_file.c:19545:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,451 19545 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,451 | ^ 2021-07-15T16:16:13,451 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,451 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,451 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,451 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:13,452 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:13,452 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,467 lib/bx/bbi/bbi_file.c:19545:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,467 19545 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,468 | ^ 2021-07-15T16:16:13,468 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,468 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,468 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,468 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,468 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,468 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,484 lib/bx/bbi/bbi_file.c:19545:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,484 19545 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,484 | ^ 2021-07-15T16:16:13,484 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,484 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,484 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,485 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,485 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,485 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,500 lib/bx/bbi/bbi_file.c:19545:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,500 19545 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,501 | ^ 2021-07-15T16:16:13,501 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,501 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,501 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,501 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:13,501 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:13,501 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,517 lib/bx/bbi/bbi_file.c:19545:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,517 19545 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,517 | ^ 2021-07-15T16:16:13,517 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,517 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,518 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,518 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,518 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,518 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,537 lib/bx/bbi/bbi_file.c:19561:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,537 19561 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,537 | ^ 2021-07-15T16:16:13,537 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,537 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,537 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,537 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,538 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,538 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,553 lib/bx/bbi/bbi_file.c:19561:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,553 19561 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,553 | ^ 2021-07-15T16:16:13,553 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,554 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,554 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,554 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:13,554 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:13,554 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,569 lib/bx/bbi/bbi_file.c:19561:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,570 19561 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,570 | ^ 2021-07-15T16:16:13,570 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,570 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,570 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,570 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,570 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,571 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,586 lib/bx/bbi/bbi_file.c:19561:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,586 19561 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,586 | ^ 2021-07-15T16:16:13,587 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,587 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,587 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,587 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,587 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,587 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,603 lib/bx/bbi/bbi_file.c:19561:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,603 19561 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,603 | ^ 2021-07-15T16:16:13,603 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,603 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,603 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,603 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:13,603 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:13,604 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:13,619 lib/bx/bbi/bbi_file.c:19561:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:13,619 19561 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:13,619 | ^ 2021-07-15T16:16:13,620 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:13,620 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:13,620 from lib/bx/bbi/bbi_file.c:4: 2021-07-15T16:16:13,620 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:13,620 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:13,620 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:34,228 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bbi_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bbi_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:16:34,415 building 'bx.bbi.bigwig_file' extension 2021-07-15T16:16:34,415 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/bbi/bigwig_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bigwig_file.o 2021-07-15T16:16:34,788 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:16:34,789 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:16:34,789 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:16:34,789 from lib/bx/bbi/bigwig_file.c:598: 2021-07-15T16:16:34,789 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:16:34,789 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:16:34,789 | ^~~~~~~ 2021-07-15T16:16:34,857 lib/bx/bbi/bigwig_file.c: In function ‘__pyx_f_2bx_3bbi_11bigwig_file_18BigWigBlockHandler_handle_block’: 2021-07-15T16:16:34,859 lib/bx/bbi/bigwig_file.c:3275:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T16:16:34,859 3275 | __pyx_t_11 = ((__pyx_v_s < __pyx_v_self->start) != 0); 2021-07-15T16:16:34,859 | ^ 2021-07-15T16:16:34,860 lib/bx/bbi/bigwig_file.c:3304:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T16:16:34,861 3304 | __pyx_t_11 = ((__pyx_v_e > __pyx_v_self->end) != 0); 2021-07-15T16:16:34,861 | ^ 2021-07-15T16:16:34,898 lib/bx/bbi/bigwig_file.c: In function ‘__pyx_f_2bx_3bbi_11bigwig_file_29ArrayAccumulatingBlockHandler_handle_interval_value’: 2021-07-15T16:16:34,900 lib/bx/bbi/bigwig_file.c:5183:76: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_2bx_3bbi_5types_bits32’ {aka ‘unsigned int’} [-Wsign-compare] 2021-07-15T16:16:34,901 5183 | for (__pyx_v_i = (__pyx_v_s - __pyx_v_self->__pyx_base.start); __pyx_v_i < __pyx_t_2; __pyx_v_i++) { 2021-07-15T16:16:34,901 | ^ 2021-07-15T16:16:35,232 lib/bx/bbi/bigwig_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:16:35,240 lib/bx/bbi/bigwig_file.c:15068:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,240 15068 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,240 | ^ 2021-07-15T16:16:35,240 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,240 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,240 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,241 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,241 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,241 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,250 lib/bx/bbi/bigwig_file.c:15068:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,250 15068 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,250 | ^ 2021-07-15T16:16:35,250 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,250 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,251 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,251 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:35,251 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:35,251 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,259 lib/bx/bbi/bigwig_file.c:15068:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,260 15068 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,260 | ^ 2021-07-15T16:16:35,260 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,260 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,260 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,260 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,260 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,261 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,269 lib/bx/bbi/bigwig_file.c:15068:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,269 15068 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,269 | ^ 2021-07-15T16:16:35,270 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,270 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,270 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,270 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,270 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,270 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,278 lib/bx/bbi/bigwig_file.c:15068:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,279 15068 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,279 | ^ 2021-07-15T16:16:35,279 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,279 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,279 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,279 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:35,279 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:35,280 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,288 lib/bx/bbi/bigwig_file.c:15068:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,288 15068 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,288 | ^ 2021-07-15T16:16:35,288 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,289 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,289 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,289 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,289 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,289 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,300 lib/bx/bbi/bigwig_file.c:15084:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,300 15084 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,300 | ^ 2021-07-15T16:16:35,300 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,300 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,300 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,300 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,301 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,301 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,309 lib/bx/bbi/bigwig_file.c:15084:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,309 15084 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,309 | ^ 2021-07-15T16:16:35,310 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,310 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,310 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,310 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:35,310 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:35,310 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,319 lib/bx/bbi/bigwig_file.c:15084:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,319 15084 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,319 | ^ 2021-07-15T16:16:35,319 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,319 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,319 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,319 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,320 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,320 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,328 lib/bx/bbi/bigwig_file.c:15084:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,328 15084 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,328 | ^ 2021-07-15T16:16:35,329 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,329 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,329 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,329 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,329 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,329 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,337 lib/bx/bbi/bigwig_file.c:15084:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,338 15084 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,338 | ^ 2021-07-15T16:16:35,338 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,338 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,338 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,338 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:35,338 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:35,339 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:35,347 lib/bx/bbi/bigwig_file.c:15084:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:35,347 15084 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:35,347 | ^ 2021-07-15T16:16:35,348 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:35,348 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:35,348 from lib/bx/bbi/bigwig_file.c:4: 2021-07-15T16:16:35,348 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:35,348 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:35,348 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:43,851 lib/bx/bbi/bigwig_file.c: In function ‘__pyx_f_2bx_3bbi_11bigwig_file_18BigWigBlockHandler_handle_block’: 2021-07-15T16:16:43,853 lib/bx/bbi/bigwig_file.c:3361:18: warning: ‘__pyx_v_val’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:16:43,853 3361 | __pyx_t_2 = ((struct __pyx_vtabstruct_2bx_3bbi_11bigwig_file_BigWigBlockHandler *)__pyx_v_self->__pyx_base.__pyx_vtab)->handle_interval_value(__pyx_v_self, __pyx_v_s, __pyx_v_e, __pyx_v_val); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 75, __pyx_L1_error) 2021-07-15T16:16:43,853 | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:43,855 lib/bx/bbi/bigwig_file.c:3304:51: warning: ‘__pyx_v_e’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:16:43,855 3304 | __pyx_t_11 = ((__pyx_v_e > __pyx_v_self->end) != 0); 2021-07-15T16:16:43,855 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-07-15T16:16:43,856 lib/bx/bbi/bigwig_file.c:3275:53: warning: ‘__pyx_v_s’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:16:43,857 3275 | __pyx_t_11 = ((__pyx_v_s < __pyx_v_self->start) != 0); 2021-07-15T16:16:43,857 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-07-15T16:16:50,070 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bigwig_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bigwig_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:16:50,245 building 'bx.bbi.bigbed_file' extension 2021-07-15T16:16:50,245 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/bbi/bigbed_file.c -o build/temp.linux-armv7l-3.9/lib/bx/bbi/bigbed_file.o 2021-07-15T16:16:50,632 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:16:50,632 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:16:50,632 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:16:50,633 from lib/bx/bbi/bigbed_file.c:598: 2021-07-15T16:16:50,633 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:16:50,633 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:16:50,633 | ^~~~~~~ 2021-07-15T16:16:50,932 lib/bx/bbi/bigbed_file.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:16:50,938 lib/bx/bbi/bigbed_file.c:11350:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,938 11350 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,938 | ^ 2021-07-15T16:16:50,939 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,939 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,940 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,940 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:50,940 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:50,940 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,947 lib/bx/bbi/bigbed_file.c:11350:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,947 11350 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,947 | ^ 2021-07-15T16:16:50,948 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,948 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,948 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,948 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:50,948 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:50,948 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,955 lib/bx/bbi/bigbed_file.c:11350:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,956 11350 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,956 | ^ 2021-07-15T16:16:50,956 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,956 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,956 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,956 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:50,957 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:50,957 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,964 lib/bx/bbi/bigbed_file.c:11350:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,964 11350 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,964 | ^ 2021-07-15T16:16:50,965 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,965 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,965 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,965 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:50,965 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:50,965 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,972 lib/bx/bbi/bigbed_file.c:11350:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,973 11350 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,973 | ^ 2021-07-15T16:16:50,973 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,973 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,973 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,973 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:50,973 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:50,974 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,981 lib/bx/bbi/bigbed_file.c:11350:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,981 11350 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,981 | ^ 2021-07-15T16:16:50,981 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,981 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,982 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,982 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:50,982 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:50,982 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,991 lib/bx/bbi/bigbed_file.c:11366:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,991 11366 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:50,991 | ^ 2021-07-15T16:16:50,991 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:50,992 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:50,992 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:50,992 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:50,992 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:50,992 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:50,999 lib/bx/bbi/bigbed_file.c:11366:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:50,999 11366 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:51,000 | ^ 2021-07-15T16:16:51,000 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:51,000 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:51,000 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:51,000 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:51,000 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:51,000 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:51,008 lib/bx/bbi/bigbed_file.c:11366:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:51,008 11366 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:51,008 | ^ 2021-07-15T16:16:51,008 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:51,008 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:51,008 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:51,009 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:51,009 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:51,009 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:51,016 lib/bx/bbi/bigbed_file.c:11366:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:51,016 11366 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:51,016 | ^ 2021-07-15T16:16:51,017 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:51,017 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:51,017 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:51,017 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:51,017 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:51,017 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:51,024 lib/bx/bbi/bigbed_file.c:11366:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:51,025 11366 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:51,025 | ^ 2021-07-15T16:16:51,025 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:51,025 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:51,025 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:51,025 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:16:51,025 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:16:51,026 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:16:51,033 lib/bx/bbi/bigbed_file.c:11366:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:16:51,033 11366 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:16:51,033 | ^ 2021-07-15T16:16:51,033 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:16:51,034 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:16:51,034 from lib/bx/bbi/bigbed_file.c:4: 2021-07-15T16:16:51,034 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:16:51,034 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:16:51,034 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:00,786 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/bbi/bigbed_file.o -o build/lib.linux-armv7l-3.9/bx/bbi/bigbed_file.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:00,933 building 'bx.align._epo' extension 2021-07-15T16:17:00,938 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c lib/bx/align/_epo.c -o build/temp.linux-armv7l-3.9/lib/bx/align/_epo.o 2021-07-15T16:17:01,311 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:17:01,311 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:17:01,311 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:17:01,312 from lib/bx/align/_epo.c:598: 2021-07-15T16:17:01,312 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:17:01,312 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:17:01,312 | ^~~~~~~ 2021-07-15T16:17:01,454 lib/bx/align/_epo.c: In function ‘__pyx_f_2bx_5align_4_epo_bed_union’: 2021-07-15T16:17:01,457 lib/bx/align/_epo.c:5390:237: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2021-07-15T16:17:01,457 5390 | __pyx_t_4 = (((*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_uint64_t *, __pyx_pybuffernd_elements.rcbuffer->pybuffer.buf, __pyx_t_18, __pyx_pybuffernd_elements.diminfo[0].strides, __pyx_t_19, __pyx_pybuffernd_elements.diminfo[1].strides)) <= __pyx_v_cen) != 0); 2021-07-15T16:17:01,457 | ^~ 2021-07-15T16:17:01,592 lib/bx/align/_epo.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:17:01,596 lib/bx/align/_epo.c:9730:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,597 9730 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,597 | ^ 2021-07-15T16:17:01,597 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,597 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,597 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,598 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,598 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,598 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,603 lib/bx/align/_epo.c:9730:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,603 9730 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,603 | ^ 2021-07-15T16:17:01,604 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,604 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,604 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,604 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:01,604 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:01,604 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,609 lib/bx/align/_epo.c:9730:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,609 9730 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,609 | ^ 2021-07-15T16:17:01,610 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,610 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,610 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,610 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,610 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,610 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,615 lib/bx/align/_epo.c:9730:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,615 9730 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,615 | ^ 2021-07-15T16:17:01,615 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,616 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,616 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,616 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,616 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,616 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,621 lib/bx/align/_epo.c:9730:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,621 9730 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,621 | ^ 2021-07-15T16:17:01,621 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,622 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,622 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,622 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:01,622 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:01,622 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,627 lib/bx/align/_epo.c:9730:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,627 9730 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,627 | ^ 2021-07-15T16:17:01,627 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,627 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,628 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,628 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,628 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,628 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,634 lib/bx/align/_epo.c:9746:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,635 9746 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,635 | ^ 2021-07-15T16:17:01,635 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,635 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,635 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,635 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,635 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,635 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,640 lib/bx/align/_epo.c:9746:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,640 9746 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,640 | ^ 2021-07-15T16:17:01,641 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,641 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,641 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,641 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:01,641 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:01,641 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,646 lib/bx/align/_epo.c:9746:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,646 9746 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,646 | ^ 2021-07-15T16:17:01,647 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,647 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,647 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,647 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,647 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,647 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,652 lib/bx/align/_epo.c:9746:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,652 9746 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,652 | ^ 2021-07-15T16:17:01,653 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,653 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,653 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,653 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,653 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,653 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,658 lib/bx/align/_epo.c:9746:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,658 9746 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,658 | ^ 2021-07-15T16:17:01,658 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,659 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,659 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,659 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:01,659 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:01,659 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:01,664 lib/bx/align/_epo.c:9746:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:01,664 9746 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:01,664 | ^ 2021-07-15T16:17:01,664 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:01,665 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:01,665 from lib/bx/align/_epo.c:4: 2021-07-15T16:17:01,665 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:01,665 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:01,665 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:14,513 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/align/_epo.o -o build/lib.linux-armv7l-3.9/bx/align/_epo.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:14,665 building 'bx.arrays.bed' extension 2021-07-15T16:17:14,666 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/arrays/bed.c -o build/temp.linux-armv7l-3.9/lib/bx/arrays/bed.o 2021-07-15T16:17:15,074 lib/bx/arrays/bed.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:17:15,076 lib/bx/arrays/bed.c:3344:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,076 3344 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,076 | ^ 2021-07-15T16:17:15,077 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,077 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,077 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,077 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,077 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,077 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,078 lib/bx/arrays/bed.c:3344:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,078 3344 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,079 | ^ 2021-07-15T16:17:15,079 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,079 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,079 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,079 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:15,079 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:15,079 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,080 lib/bx/arrays/bed.c:3344:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,080 3344 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,081 | ^ 2021-07-15T16:17:15,081 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,081 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,081 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,081 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,081 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,081 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,082 lib/bx/arrays/bed.c:3344:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,082 3344 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,082 | ^ 2021-07-15T16:17:15,083 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,083 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,083 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,083 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,083 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,083 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,084 lib/bx/arrays/bed.c:3344:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,084 3344 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,084 | ^ 2021-07-15T16:17:15,084 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,085 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,085 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,085 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:15,085 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:15,085 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,086 lib/bx/arrays/bed.c:3344:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,086 3344 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,086 | ^ 2021-07-15T16:17:15,086 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,086 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,087 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,087 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,087 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,087 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,089 lib/bx/arrays/bed.c:3360:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,089 3360 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,089 | ^ 2021-07-15T16:17:15,089 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,089 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,089 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,089 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,089 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,090 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,090 lib/bx/arrays/bed.c:3360:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,091 3360 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,091 | ^ 2021-07-15T16:17:15,091 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,091 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,091 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,091 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:15,091 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:15,091 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,092 lib/bx/arrays/bed.c:3360:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,092 3360 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,093 | ^ 2021-07-15T16:17:15,093 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,093 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,093 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,093 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,093 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,093 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,094 lib/bx/arrays/bed.c:3360:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,094 3360 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,094 | ^ 2021-07-15T16:17:15,095 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,095 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,095 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,095 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,095 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,095 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,096 lib/bx/arrays/bed.c:3360:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,096 3360 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,096 | ^ 2021-07-15T16:17:15,096 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,097 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,097 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,097 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:15,097 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:15,097 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:15,098 lib/bx/arrays/bed.c:3360:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:15,098 3360 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:15,098 | ^ 2021-07-15T16:17:15,098 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:15,098 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:15,099 from lib/bx/arrays/bed.c:4: 2021-07-15T16:17:15,099 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:15,099 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:15,099 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,112 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/arrays/bed.o -o build/lib.linux-armv7l-3.9/bx/arrays/bed.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:18,232 building 'bx.arrays.wiggle' extension 2021-07-15T16:17:18,232 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/arrays/wiggle.c -o build/temp.linux-armv7l-3.9/lib/bx/arrays/wiggle.o 2021-07-15T16:17:18,683 lib/bx/arrays/wiggle.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:17:18,685 lib/bx/arrays/wiggle.c:4916:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,685 4916 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,686 | ^ 2021-07-15T16:17:18,686 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,686 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,686 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,686 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,686 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,686 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,689 lib/bx/arrays/wiggle.c:4916:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,689 4916 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,689 | ^ 2021-07-15T16:17:18,689 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,689 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,689 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,690 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:18,690 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:18,690 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,692 lib/bx/arrays/wiggle.c:4916:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,692 4916 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,692 | ^ 2021-07-15T16:17:18,692 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,692 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,692 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,692 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,693 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,693 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,694 lib/bx/arrays/wiggle.c:4916:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,695 4916 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,695 | ^ 2021-07-15T16:17:18,695 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,695 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,695 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,695 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,695 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,695 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,697 lib/bx/arrays/wiggle.c:4916:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,697 4916 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,698 | ^ 2021-07-15T16:17:18,698 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,698 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,698 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,698 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:18,698 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:18,698 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,700 lib/bx/arrays/wiggle.c:4916:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,700 4916 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,701 | ^ 2021-07-15T16:17:18,701 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,701 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,701 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,701 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,701 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,701 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,704 lib/bx/arrays/wiggle.c:4932:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,704 4932 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,704 | ^ 2021-07-15T16:17:18,705 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,705 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,705 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,705 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,705 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,705 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,707 lib/bx/arrays/wiggle.c:4932:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,707 4932 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,707 | ^ 2021-07-15T16:17:18,707 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,707 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,708 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,708 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:18,708 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:18,708 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,710 lib/bx/arrays/wiggle.c:4932:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,710 4932 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,710 | ^ 2021-07-15T16:17:18,710 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,710 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,710 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,711 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,711 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,711 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,713 lib/bx/arrays/wiggle.c:4932:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,713 4932 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,713 | ^ 2021-07-15T16:17:18,713 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,713 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,713 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,714 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,714 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,714 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,716 lib/bx/arrays/wiggle.c:4932:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,716 4932 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,716 | ^ 2021-07-15T16:17:18,716 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,716 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,716 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,716 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:18,716 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:18,717 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:18,718 lib/bx/arrays/wiggle.c:4932:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:18,719 4932 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:18,719 | ^ 2021-07-15T16:17:18,719 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:18,719 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:18,719 from lib/bx/arrays/wiggle.c:4: 2021-07-15T16:17:18,719 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:18,719 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:18,720 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:24,511 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/arrays/wiggle.o -o build/lib.linux-armv7l-3.9/bx/arrays/wiggle.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:24,639 building 'bx.align.sitemask._cpg' extension 2021-07-15T16:17:24,640 creating build/temp.linux-armv7l-3.9/lib/bx/align/sitemask 2021-07-15T16:17:24,640 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/align/sitemask/_cpg.c -o build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/_cpg.o 2021-07-15T16:17:25,070 lib/bx/align/sitemask/_cpg.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:17:25,072 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,072 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,072 | ^ 2021-07-15T16:17:25,072 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,072 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,073 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,073 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,073 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,073 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,074 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,074 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,075 | ^ 2021-07-15T16:17:25,075 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,075 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,075 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,075 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:25,075 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:25,075 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,076 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,077 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,077 | ^ 2021-07-15T16:17:25,077 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,077 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,077 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,077 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,077 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,077 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,079 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,079 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,079 | ^ 2021-07-15T16:17:25,079 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,079 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,079 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,079 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,080 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,080 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,081 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,081 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,081 | ^ 2021-07-15T16:17:25,081 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,081 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,081 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,082 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:25,082 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:25,082 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,083 lib/bx/align/sitemask/_cpg.c:3861:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,083 3861 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,083 | ^ 2021-07-15T16:17:25,083 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,083 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,084 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,084 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,084 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,084 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,086 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,086 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,086 | ^ 2021-07-15T16:17:25,086 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,086 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,086 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,087 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,087 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,087 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,088 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,088 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,088 | ^ 2021-07-15T16:17:25,088 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,088 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,089 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,089 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:25,089 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:25,089 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,090 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,090 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,090 | ^ 2021-07-15T16:17:25,090 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,091 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,091 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,091 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,091 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,091 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,092 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,092 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,092 | ^ 2021-07-15T16:17:25,093 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,093 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,093 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,093 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,093 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,093 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,094 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,094 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,094 | ^ 2021-07-15T16:17:25,095 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,095 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,095 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,095 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:25,095 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:25,095 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:25,096 lib/bx/align/sitemask/_cpg.c:3877:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:25,096 3877 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:25,097 | ^ 2021-07-15T16:17:25,097 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:25,097 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:25,097 from lib/bx/align/sitemask/_cpg.c:4: 2021-07-15T16:17:25,097 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:25,097 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:25,097 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:28,483 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c lib/bx/align/sitemask/find_cpg.c -o build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/find_cpg.o 2021-07-15T16:17:28,686 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/_cpg.o build/temp.linux-armv7l-3.9/lib/bx/align/sitemask/find_cpg.o -o build/lib.linux-armv7l-3.9/bx/align/sitemask/_cpg.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:28,812 building 'bx.intseq.ngramcount' extension 2021-07-15T16:17:28,813 creating build/temp.linux-armv7l-3.9/lib/bx/intseq 2021-07-15T16:17:28,813 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.9 -c lib/bx/intseq/ngramcount.c -o build/temp.linux-armv7l-3.9/lib/bx/intseq/ngramcount.o 2021-07-15T16:17:29,243 lib/bx/intseq/ngramcount.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:17:29,244 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,244 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,244 | ^ 2021-07-15T16:17:29,245 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,245 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,245 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,245 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,245 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,245 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,246 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,246 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,246 | ^ 2021-07-15T16:17:29,246 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,247 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,247 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,247 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:29,247 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:29,247 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,247 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,248 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,248 | ^ 2021-07-15T16:17:29,248 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,248 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,248 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,248 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,248 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,248 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,249 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,249 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,249 | ^ 2021-07-15T16:17:29,249 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,249 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,250 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,250 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,250 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,250 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,250 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,250 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,251 | ^ 2021-07-15T16:17:29,251 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,251 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,251 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,251 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:29,251 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:29,251 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,252 lib/bx/intseq/ngramcount.c:2556:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,252 2556 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,252 | ^ 2021-07-15T16:17:29,252 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,252 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,252 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,253 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,253 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,253 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,254 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,254 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,254 | ^ 2021-07-15T16:17:29,254 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,254 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,254 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,254 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,255 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,255 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,255 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,255 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,255 | ^ 2021-07-15T16:17:29,255 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,256 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,256 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,256 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:29,256 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:29,256 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,256 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,257 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,257 | ^ 2021-07-15T16:17:29,257 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,257 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,257 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,257 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,257 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,257 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,258 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,258 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,258 | ^ 2021-07-15T16:17:29,258 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,258 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,258 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,259 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,259 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,259 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,259 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,259 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,259 | ^ 2021-07-15T16:17:29,260 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,260 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,260 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,260 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:29,260 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:29,260 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:29,261 lib/bx/intseq/ngramcount.c:2572:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:29,261 2572 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:29,261 | ^ 2021-07-15T16:17:29,261 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:29,261 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:29,261 from lib/bx/intseq/ngramcount.c:4: 2021-07-15T16:17:29,261 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:29,261 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:29,262 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:31,536 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/intseq/ngramcount.o -o build/lib.linux-armv7l-3.9/bx/intseq/ngramcount.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:31,914 building 'bx.misc._seekbzip2' extension 2021-07-15T16:17:31,919 creating build/temp.linux-armv7l-3.9/src/bunzip 2021-07-15T16:17:31,921 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/bunzip -I/usr/include/python3.9 -c lib/bx/misc/_seekbzip2.c -o build/temp.linux-armv7l-3.9/lib/bx/misc/_seekbzip2.o 2021-07-15T16:17:32,621 lib/bx/misc/_seekbzip2.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:17:32,623 lib/bx/misc/_seekbzip2.c:3313:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,623 3313 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,623 | ^ 2021-07-15T16:17:32,624 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,624 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,625 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,625 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,625 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,625 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,627 lib/bx/misc/_seekbzip2.c:3313:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,627 3313 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,627 | ^ 2021-07-15T16:17:32,627 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,628 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,628 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,628 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:32,628 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:32,628 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,630 lib/bx/misc/_seekbzip2.c:3313:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,630 3313 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,630 | ^ 2021-07-15T16:17:32,631 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,631 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,631 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,631 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,631 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,631 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,633 lib/bx/misc/_seekbzip2.c:3313:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,633 3313 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,633 | ^ 2021-07-15T16:17:32,634 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,634 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,634 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,634 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,634 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,634 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,636 lib/bx/misc/_seekbzip2.c:3313:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,636 3313 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,636 | ^ 2021-07-15T16:17:32,637 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,637 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,637 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,637 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:32,637 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:32,637 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,639 lib/bx/misc/_seekbzip2.c:3313:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,639 3313 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,639 | ^ 2021-07-15T16:17:32,640 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,640 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,640 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,640 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,640 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,640 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,643 lib/bx/misc/_seekbzip2.c:3329:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,643 3329 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,643 | ^ 2021-07-15T16:17:32,644 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,644 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,644 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,644 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,644 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,644 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,646 lib/bx/misc/_seekbzip2.c:3329:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,646 3329 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,646 | ^ 2021-07-15T16:17:32,647 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,647 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,647 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,647 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:32,647 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:32,647 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,649 lib/bx/misc/_seekbzip2.c:3329:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,649 3329 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,649 | ^ 2021-07-15T16:17:32,650 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,650 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,650 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,650 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,650 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,650 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,652 lib/bx/misc/_seekbzip2.c:3329:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,652 3329 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,652 | ^ 2021-07-15T16:17:32,653 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,653 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,653 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,653 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,653 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,653 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,655 lib/bx/misc/_seekbzip2.c:3329:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,655 3329 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,655 | ^ 2021-07-15T16:17:32,656 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,656 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,656 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,656 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:17:32,656 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:17:32,656 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:32,658 lib/bx/misc/_seekbzip2.c:3329:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:17:32,658 3329 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:17:32,658 | ^ 2021-07-15T16:17:32,659 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:17:32,659 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:17:32,659 from lib/bx/misc/_seekbzip2.c:4: 2021-07-15T16:17:32,659 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:17:32,659 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:17:32,659 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:17:34,978 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/bunzip -I/usr/include/python3.9 -c src/bunzip/micro-bunzip.c -o build/temp.linux-armv7l-3.9/src/bunzip/micro-bunzip.o 2021-07-15T16:17:35,126 src/bunzip/micro-bunzip.c: In function ‘get_next_block’: 2021-07-15T16:17:35,126 src/bunzip/micro-bunzip.c:151:31: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T16:17:35,126 151 | if((origPtr=get_bits(bd,24)) > dbufSize) return RETVAL_DATA_ERROR; 2021-07-15T16:17:35,126 | ^ 2021-07-15T16:17:35,128 src/bunzip/micro-bunzip.c:298:27: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T16:17:35,128 298 | while (bd->inbufBitCountmaxLen) { 2021-07-15T16:17:35,128 | ^ 2021-07-15T16:17:35,130 src/bunzip/micro-bunzip.c:400:13: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-07-15T16:17:35,130 400 | if(origPtr>=dbufCount) return RETVAL_DATA_ERROR; 2021-07-15T16:17:35,130 | ^~ 2021-07-15T16:17:35,133 src/bunzip/micro-bunzip.c: In function ‘start_bunzip’: 2021-07-15T16:17:35,133 src/bunzip/micro-bunzip.c:629:12: warning: pointer targets in assignment from ‘char *’ to ‘unsigned char *’ differ in signedness [-Wpointer-sign] 2021-07-15T16:17:35,133 629 | bd->inbuf=inbuf; 2021-07-15T16:17:35,134 | ^ 2021-07-15T16:17:35,357 src/bunzip/micro-bunzip.c: In function ‘get_next_block’: 2021-07-15T16:17:35,357 src/bunzip/micro-bunzip.c:129:51: warning: ‘limit’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:17:35,357 129 | int dbufCount,nextSym,dbufSize,groupCount,*base,*limit,selector, 2021-07-15T16:17:35,357 | ^~~~~ 2021-07-15T16:17:35,357 src/bunzip/micro-bunzip.c:129:45: warning: ‘base’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:17:35,357 129 | int dbufCount,nextSym,dbufSize,groupCount,*base,*limit,selector, 2021-07-15T16:17:35,358 | ^~~~ 2021-07-15T16:17:35,358 src/bunzip/micro-bunzip.c:128:21: warning: ‘hufGroup’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:17:35,358 128 | struct group_data *hufGroup; 2021-07-15T16:17:35,358 | ^~~~~~~~ 2021-07-15T16:17:35,732 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/lib/bx/misc/_seekbzip2.o build/temp.linux-armv7l-3.9/src/bunzip/micro-bunzip.o -o build/lib.linux-armv7l-3.9/bx/misc/_seekbzip2.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:17:35,854 running build_scripts 2021-07-15T16:17:35,854 creating build/scripts-3.9 2021-07-15T16:17:35,855 copying and adjusting scripts/maf_covered_regions.py -> build/scripts-3.9 2021-07-15T16:17:35,857 copying and adjusting scripts/maf_extract_ranges.py -> build/scripts-3.9 2021-07-15T16:17:35,858 copying and adjusting scripts/bed_extend_to.py -> build/scripts-3.9 2021-07-15T16:17:35,860 copying and adjusting scripts/find_in_sorted_file.py -> build/scripts-3.9 2021-07-15T16:17:35,861 copying and adjusting scripts/maf_split_by_src.py -> build/scripts-3.9 2021-07-15T16:17:35,863 copying and adjusting scripts/maf_chunk.py -> build/scripts-3.9 2021-07-15T16:17:35,864 copying and adjusting scripts/get_scores_in_intervals.py -> build/scripts-3.9 2021-07-15T16:17:35,866 copying and adjusting scripts/wiggle_to_array_tree.py -> build/scripts-3.9 2021-07-15T16:17:35,867 copying and adjusting scripts/maf_print_chroms.py -> build/scripts-3.9 2021-07-15T16:17:35,868 copying and adjusting scripts/table_filter.py -> build/scripts-3.9 2021-07-15T16:17:35,870 copying and adjusting scripts/bed_merge_overlapping.py -> build/scripts-3.9 2021-07-15T16:17:35,872 copying and adjusting scripts/wiggle_to_binned_array.py -> build/scripts-3.9 2021-07-15T16:17:35,873 copying and adjusting scripts/maf_percent_columns_matching.py -> build/scripts-3.9 2021-07-15T16:17:35,874 copying and adjusting scripts/tfloc_summary.py -> build/scripts-3.9 2021-07-15T16:17:35,876 copying and adjusting scripts/maf_chop.py -> build/scripts-3.9 2021-07-15T16:17:35,877 copying and adjusting scripts/lav_to_axt.py -> build/scripts-3.9 2021-07-15T16:17:35,879 copying and adjusting scripts/nib_chrom_intervals_to_fasta.py -> build/scripts-3.9 2021-07-15T16:17:35,880 copying and adjusting scripts/bed_coverage.py -> build/scripts-3.9 2021-07-15T16:17:35,882 copying and adjusting scripts/maf_tile.py -> build/scripts-3.9 2021-07-15T16:17:35,884 copying and adjusting scripts/gene_fourfold_sites.py -> build/scripts-3.9 2021-07-15T16:17:35,886 copying and adjusting scripts/maf_shuffle_columns.py -> build/scripts-3.9 2021-07-15T16:17:35,887 copying and adjusting scripts/maf_build_index.py -> build/scripts-3.9 2021-07-15T16:17:35,889 copying and adjusting scripts/maf_tile_2.py -> build/scripts-3.9 2021-07-15T16:17:35,891 copying and adjusting scripts/maf_truncate.py -> build/scripts-3.9 2021-07-15T16:17:35,892 copying and adjusting scripts/wiggle_to_simple.py -> build/scripts-3.9 2021-07-15T16:17:35,894 copying and adjusting scripts/maf_filter.py -> build/scripts-3.9 2021-07-15T16:17:35,895 copying and adjusting scripts/prefix_lines.py -> build/scripts-3.9 2021-07-15T16:17:35,896 copying and adjusting scripts/mMK_bitset.py -> build/scripts-3.9 2021-07-15T16:17:35,898 copying and adjusting scripts/maf_species_in_all_files.py -> build/scripts-3.9 2021-07-15T16:17:35,900 copying and adjusting scripts/maf_to_axt.py -> build/scripts-3.9 2021-07-15T16:17:35,901 copying and adjusting scripts/maf_extract_ranges_indexed.py -> build/scripts-3.9 2021-07-15T16:17:35,903 copying and adjusting scripts/bed_intersect.py -> build/scripts-3.9 2021-07-15T16:17:35,905 copying and adjusting scripts/maf_interval_alignibility.py -> build/scripts-3.9 2021-07-15T16:17:35,906 copying and adjusting scripts/maf_translate_chars.py -> build/scripts-3.9 2021-07-15T16:17:35,908 copying and adjusting scripts/maf_limit_to_species.py -> build/scripts-3.9 2021-07-15T16:17:35,909 copying and adjusting scripts/maf_to_int_seqs.py -> build/scripts-3.9 2021-07-15T16:17:35,911 copying and adjusting scripts/axt_to_maf.py -> build/scripts-3.9 2021-07-15T16:17:35,912 copying and adjusting scripts/axt_to_lav.py -> build/scripts-3.9 2021-07-15T16:17:35,914 copying and adjusting scripts/bed_count_by_interval.py -> build/scripts-3.9 2021-07-15T16:17:35,916 copying and adjusting scripts/maf_randomize.py -> build/scripts-3.9 2021-07-15T16:17:35,917 copying and adjusting scripts/maf_extract_chrom_ranges.py -> build/scripts-3.9 2021-07-15T16:17:35,919 copying and adjusting scripts/aggregate_scores_in_intervals.py -> build/scripts-3.9 2021-07-15T16:17:35,921 copying and adjusting scripts/maf_covered_ranges.py -> build/scripts-3.9 2021-07-15T16:17:35,922 copying and adjusting scripts/lzop_build_offset_table.py -> build/scripts-3.9 2021-07-15T16:17:35,924 copying and adjusting scripts/nib_intervals_to_fasta.py -> build/scripts-3.9 2021-07-15T16:17:35,925 copying and adjusting scripts/bed_rand_intersect.py -> build/scripts-3.9 2021-07-15T16:17:35,927 copying and adjusting scripts/maf_div_sites.py -> build/scripts-3.9 2021-07-15T16:17:35,928 copying and adjusting scripts/maf_to_concat_fasta.py -> build/scripts-3.9 2021-07-15T16:17:35,930 copying and adjusting scripts/table_add_column.py -> build/scripts-3.9 2021-07-15T16:17:35,931 copying and adjusting scripts/bed_build_windows.py -> build/scripts-3.9 2021-07-15T16:17:35,933 copying and adjusting scripts/wiggle_to_chr_binned_array.py -> build/scripts-3.9 2021-07-15T16:17:35,934 copying and adjusting scripts/bnMapper.py -> build/scripts-3.9 2021-07-15T16:17:35,937 copying and adjusting scripts/maf_mapping_word_frequency.py -> build/scripts-3.9 2021-07-15T16:17:35,938 copying and adjusting scripts/maf_col_counts.py -> build/scripts-3.9 2021-07-15T16:17:35,940 copying and adjusting scripts/random_lines.py -> build/scripts-3.9 2021-07-15T16:17:35,941 copying and adjusting scripts/maf_thread_for_species.py -> build/scripts-3.9 2021-07-15T16:17:35,943 copying and adjusting scripts/maf_gc_content.py -> build/scripts-3.9 2021-07-15T16:17:35,944 copying and adjusting scripts/maf_drop_overlapping.py -> build/scripts-3.9 2021-07-15T16:17:35,945 copying and adjusting scripts/interval_count_intersections.py -> build/scripts-3.9 2021-07-15T16:17:35,947 copying and adjusting scripts/bed_count_overlapping.py -> build/scripts-3.9 2021-07-15T16:17:35,948 copying and adjusting scripts/maf_mean_length_ungapped_piece.py -> build/scripts-3.9 2021-07-15T16:17:35,950 copying and adjusting scripts/maf_col_counts_all.py -> build/scripts-3.9 2021-07-15T16:17:35,951 copying and adjusting scripts/maf_word_frequency.py -> build/scripts-3.9 2021-07-15T16:17:35,952 copying and adjusting scripts/nib_length.py -> build/scripts-3.9 2021-07-15T16:17:35,954 copying and adjusting scripts/maf_mask_cpg.py -> build/scripts-3.9 2021-07-15T16:17:35,955 copying and adjusting scripts/int_seqs_to_char_strings.py -> build/scripts-3.9 2021-07-15T16:17:35,956 copying and adjusting scripts/bed_subtract_basewise.py -> build/scripts-3.9 2021-07-15T16:17:35,958 copying and adjusting scripts/mask_quality.py -> build/scripts-3.9 2021-07-15T16:17:35,960 copying and adjusting scripts/maf_percent_identity.py -> build/scripts-3.9 2021-07-15T16:17:35,961 copying and adjusting scripts/maf_gap_frequency.py -> build/scripts-3.9 2021-07-15T16:17:35,962 copying and adjusting scripts/bed_intersect_basewise.py -> build/scripts-3.9 2021-07-15T16:17:35,964 copying and adjusting scripts/maf_tile_2bit.py -> build/scripts-3.9 2021-07-15T16:17:35,966 copying and adjusting scripts/lav_to_maf.py -> build/scripts-3.9 2021-07-15T16:17:35,967 copying and adjusting scripts/ucsc_gene_table_to_intervals.py -> build/scripts-3.9 2021-07-15T16:17:35,969 copying and adjusting scripts/maf_select.py -> build/scripts-3.9 2021-07-15T16:17:35,970 copying and adjusting scripts/line_select.py -> build/scripts-3.9 2021-07-15T16:17:35,972 copying and adjusting scripts/maf_count.py -> build/scripts-3.9 2021-07-15T16:17:35,973 copying and adjusting scripts/div_snp_table_chr.py -> build/scripts-3.9 2021-07-15T16:17:35,975 copying and adjusting scripts/align_print_template.py -> build/scripts-3.9 2021-07-15T16:17:35,976 copying and adjusting scripts/bed_bigwig_profile.py -> build/scripts-3.9 2021-07-15T16:17:35,978 copying and adjusting scripts/maf_print_scores.py -> build/scripts-3.9 2021-07-15T16:17:35,979 copying and adjusting scripts/out_to_chain.py -> build/scripts-3.9 2021-07-15T16:17:35,981 copying and adjusting scripts/interval_join.py -> build/scripts-3.9 2021-07-15T16:17:35,982 copying and adjusting scripts/maf_to_fasta.py -> build/scripts-3.9 2021-07-15T16:17:35,984 copying and adjusting scripts/maf_region_coverage_by_src.py -> build/scripts-3.9 2021-07-15T16:17:35,985 copying and adjusting scripts/bed_complement.py -> build/scripts-3.9 2021-07-15T16:17:35,986 copying and adjusting scripts/bed_coverage_by_interval.py -> build/scripts-3.9 2021-07-15T16:17:35,988 copying and adjusting scripts/axt_to_fasta.py -> build/scripts-3.9 2021-07-15T16:17:35,989 copying and adjusting scripts/one_field_per_line.py -> build/scripts-3.9 2021-07-15T16:17:35,991 copying and adjusting scripts/pretty_table.py -> build/scripts-3.9 2021-07-15T16:17:35,992 copying and adjusting scripts/axt_extract_ranges.py -> build/scripts-3.9 2021-07-15T16:17:35,993 copying and adjusting scripts/maf_filter_max_wc.py -> build/scripts-3.9 2021-07-15T16:17:35,995 copying and adjusting scripts/qv_to_bqv.py -> build/scripts-3.9 2021-07-15T16:17:35,996 copying and adjusting scripts/bed_diff_basewise_summary.py -> build/scripts-3.9 2021-07-15T16:17:35,997 changing mode of build/scripts-3.9/maf_covered_regions.py from 644 to 755 2021-07-15T16:17:35,998 changing mode of build/scripts-3.9/maf_extract_ranges.py from 644 to 755 2021-07-15T16:17:35,998 changing mode of build/scripts-3.9/bed_extend_to.py from 644 to 755 2021-07-15T16:17:35,998 changing mode of build/scripts-3.9/find_in_sorted_file.py from 644 to 755 2021-07-15T16:17:35,998 changing mode of build/scripts-3.9/maf_split_by_src.py from 644 to 755 2021-07-15T16:17:35,999 changing mode of build/scripts-3.9/maf_chunk.py from 644 to 755 2021-07-15T16:17:35,999 changing mode of build/scripts-3.9/get_scores_in_intervals.py from 644 to 755 2021-07-15T16:17:36,000 changing mode of build/scripts-3.9/wiggle_to_array_tree.py from 644 to 755 2021-07-15T16:17:36,000 changing mode of build/scripts-3.9/maf_print_chroms.py from 644 to 755 2021-07-15T16:17:36,000 changing mode of build/scripts-3.9/table_filter.py from 644 to 755 2021-07-15T16:17:36,000 changing mode of build/scripts-3.9/bed_merge_overlapping.py from 644 to 755 2021-07-15T16:17:36,001 changing mode of build/scripts-3.9/wiggle_to_binned_array.py from 644 to 755 2021-07-15T16:17:36,001 changing mode of build/scripts-3.9/maf_percent_columns_matching.py from 644 to 755 2021-07-15T16:17:36,001 changing mode of build/scripts-3.9/tfloc_summary.py from 644 to 755 2021-07-15T16:17:36,001 changing mode of build/scripts-3.9/maf_chop.py from 644 to 755 2021-07-15T16:17:36,002 changing mode of build/scripts-3.9/lav_to_axt.py from 644 to 755 2021-07-15T16:17:36,002 changing mode of build/scripts-3.9/nib_chrom_intervals_to_fasta.py from 644 to 755 2021-07-15T16:17:36,002 changing mode of build/scripts-3.9/bed_coverage.py from 644 to 755 2021-07-15T16:17:36,003 changing mode of build/scripts-3.9/maf_tile.py from 644 to 755 2021-07-15T16:17:36,003 changing mode of build/scripts-3.9/gene_fourfold_sites.py from 644 to 755 2021-07-15T16:17:36,003 changing mode of build/scripts-3.9/maf_shuffle_columns.py from 644 to 755 2021-07-15T16:17:36,003 changing mode of build/scripts-3.9/maf_build_index.py from 644 to 755 2021-07-15T16:17:36,004 changing mode of build/scripts-3.9/maf_tile_2.py from 644 to 755 2021-07-15T16:17:36,004 changing mode of build/scripts-3.9/maf_truncate.py from 644 to 755 2021-07-15T16:17:36,004 changing mode of build/scripts-3.9/wiggle_to_simple.py from 644 to 755 2021-07-15T16:17:36,004 changing mode of build/scripts-3.9/maf_filter.py from 644 to 755 2021-07-15T16:17:36,005 changing mode of build/scripts-3.9/prefix_lines.py from 644 to 755 2021-07-15T16:17:36,005 changing mode of build/scripts-3.9/mMK_bitset.py from 644 to 755 2021-07-15T16:17:36,005 changing mode of build/scripts-3.9/maf_species_in_all_files.py from 644 to 755 2021-07-15T16:17:36,005 changing mode of build/scripts-3.9/maf_to_axt.py from 644 to 755 2021-07-15T16:17:36,006 changing mode of build/scripts-3.9/maf_extract_ranges_indexed.py from 644 to 755 2021-07-15T16:17:36,006 changing mode of build/scripts-3.9/bed_intersect.py from 644 to 755 2021-07-15T16:17:36,006 changing mode of build/scripts-3.9/maf_interval_alignibility.py from 644 to 755 2021-07-15T16:17:36,007 changing mode of build/scripts-3.9/maf_translate_chars.py from 644 to 755 2021-07-15T16:17:36,007 changing mode of build/scripts-3.9/maf_limit_to_species.py from 644 to 755 2021-07-15T16:17:36,007 changing mode of build/scripts-3.9/maf_to_int_seqs.py from 644 to 755 2021-07-15T16:17:36,008 changing mode of build/scripts-3.9/axt_to_maf.py from 644 to 755 2021-07-15T16:17:36,008 changing mode of build/scripts-3.9/axt_to_lav.py from 644 to 755 2021-07-15T16:17:36,008 changing mode of build/scripts-3.9/bed_count_by_interval.py from 644 to 755 2021-07-15T16:17:36,009 changing mode of build/scripts-3.9/maf_randomize.py from 644 to 755 2021-07-15T16:17:36,009 changing mode of build/scripts-3.9/maf_extract_chrom_ranges.py from 644 to 755 2021-07-15T16:17:36,009 changing mode of build/scripts-3.9/aggregate_scores_in_intervals.py from 644 to 755 2021-07-15T16:17:36,010 changing mode of build/scripts-3.9/maf_covered_ranges.py from 644 to 755 2021-07-15T16:17:36,010 changing mode of build/scripts-3.9/lzop_build_offset_table.py from 644 to 755 2021-07-15T16:17:36,010 changing mode of build/scripts-3.9/nib_intervals_to_fasta.py from 644 to 755 2021-07-15T16:17:36,010 changing mode of build/scripts-3.9/bed_rand_intersect.py from 644 to 755 2021-07-15T16:17:36,011 changing mode of build/scripts-3.9/maf_div_sites.py from 644 to 755 2021-07-15T16:17:36,011 changing mode of build/scripts-3.9/maf_to_concat_fasta.py from 644 to 755 2021-07-15T16:17:36,011 changing mode of build/scripts-3.9/table_add_column.py from 644 to 755 2021-07-15T16:17:36,011 changing mode of build/scripts-3.9/bed_build_windows.py from 644 to 755 2021-07-15T16:17:36,012 changing mode of build/scripts-3.9/wiggle_to_chr_binned_array.py from 644 to 755 2021-07-15T16:17:36,012 changing mode of build/scripts-3.9/bnMapper.py from 644 to 755 2021-07-15T16:17:36,012 changing mode of build/scripts-3.9/maf_mapping_word_frequency.py from 644 to 755 2021-07-15T16:17:36,013 changing mode of build/scripts-3.9/maf_col_counts.py from 644 to 755 2021-07-15T16:17:36,013 changing mode of build/scripts-3.9/random_lines.py from 644 to 755 2021-07-15T16:17:36,013 changing mode of build/scripts-3.9/maf_thread_for_species.py from 644 to 755 2021-07-15T16:17:36,013 changing mode of build/scripts-3.9/maf_gc_content.py from 644 to 755 2021-07-15T16:17:36,014 changing mode of build/scripts-3.9/maf_drop_overlapping.py from 644 to 755 2021-07-15T16:17:36,014 changing mode of build/scripts-3.9/interval_count_intersections.py from 644 to 755 2021-07-15T16:17:36,014 changing mode of build/scripts-3.9/bed_count_overlapping.py from 644 to 755 2021-07-15T16:17:36,014 changing mode of build/scripts-3.9/maf_mean_length_ungapped_piece.py from 644 to 755 2021-07-15T16:17:36,015 changing mode of build/scripts-3.9/maf_col_counts_all.py from 644 to 755 2021-07-15T16:17:36,015 changing mode of build/scripts-3.9/maf_word_frequency.py from 644 to 755 2021-07-15T16:17:36,015 changing mode of build/scripts-3.9/nib_length.py from 644 to 755 2021-07-15T16:17:36,016 changing mode of build/scripts-3.9/maf_mask_cpg.py from 644 to 755 2021-07-15T16:17:36,016 changing mode of build/scripts-3.9/int_seqs_to_char_strings.py from 644 to 755 2021-07-15T16:17:36,016 changing mode of build/scripts-3.9/bed_subtract_basewise.py from 644 to 755 2021-07-15T16:17:36,016 changing mode of build/scripts-3.9/mask_quality.py from 644 to 755 2021-07-15T16:17:36,017 changing mode of build/scripts-3.9/maf_percent_identity.py from 644 to 755 2021-07-15T16:17:36,017 changing mode of build/scripts-3.9/maf_gap_frequency.py from 644 to 755 2021-07-15T16:17:36,017 changing mode of build/scripts-3.9/bed_intersect_basewise.py from 644 to 755 2021-07-15T16:17:36,018 changing mode of build/scripts-3.9/maf_tile_2bit.py from 644 to 755 2021-07-15T16:17:36,018 changing mode of build/scripts-3.9/lav_to_maf.py from 644 to 755 2021-07-15T16:17:36,018 changing mode of build/scripts-3.9/ucsc_gene_table_to_intervals.py from 644 to 755 2021-07-15T16:17:36,019 changing mode of build/scripts-3.9/maf_select.py from 644 to 755 2021-07-15T16:17:36,019 changing mode of build/scripts-3.9/line_select.py from 644 to 755 2021-07-15T16:17:36,020 changing mode of build/scripts-3.9/maf_count.py from 644 to 755 2021-07-15T16:17:36,020 changing mode of build/scripts-3.9/div_snp_table_chr.py from 644 to 755 2021-07-15T16:17:36,020 changing mode of build/scripts-3.9/align_print_template.py from 644 to 755 2021-07-15T16:17:36,020 changing mode of build/scripts-3.9/bed_bigwig_profile.py from 644 to 755 2021-07-15T16:17:36,021 changing mode of build/scripts-3.9/maf_print_scores.py from 644 to 755 2021-07-15T16:17:36,021 changing mode of build/scripts-3.9/out_to_chain.py from 644 to 755 2021-07-15T16:17:36,021 changing mode of build/scripts-3.9/interval_join.py from 644 to 755 2021-07-15T16:17:36,021 changing mode of build/scripts-3.9/maf_to_fasta.py from 644 to 755 2021-07-15T16:17:36,022 changing mode of build/scripts-3.9/maf_region_coverage_by_src.py from 644 to 755 2021-07-15T16:17:36,022 changing mode of build/scripts-3.9/bed_complement.py from 644 to 755 2021-07-15T16:17:36,022 changing mode of build/scripts-3.9/bed_coverage_by_interval.py from 644 to 755 2021-07-15T16:17:36,023 changing mode of build/scripts-3.9/axt_to_fasta.py from 644 to 755 2021-07-15T16:17:36,023 changing mode of build/scripts-3.9/one_field_per_line.py from 644 to 755 2021-07-15T16:17:36,023 changing mode of build/scripts-3.9/pretty_table.py from 644 to 755 2021-07-15T16:17:36,024 changing mode of build/scripts-3.9/axt_extract_ranges.py from 644 to 755 2021-07-15T16:17:36,024 changing mode of build/scripts-3.9/maf_filter_max_wc.py from 644 to 755 2021-07-15T16:17:36,024 changing mode of build/scripts-3.9/qv_to_bqv.py from 644 to 755 2021-07-15T16:17:36,024 changing mode of build/scripts-3.9/bed_diff_basewise_summary.py from 644 to 755 2021-07-15T16:17:36,034 installing to build/bdist.linux-armv7l/wheel 2021-07-15T16:17:36,034 running install 2021-07-15T16:17:36,035 running install_lib 2021-07-15T16:17:36,039 creating build/bdist.linux-armv7l 2021-07-15T16:17:36,039 creating build/bdist.linux-armv7l/wheel 2021-07-15T16:17:36,041 copying build/lib.linux-armv7l-3.9/psyco_full.py -> build/bdist.linux-armv7l/wheel 2021-07-15T16:17:36,044 creating build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,044 copying build/lib.linux-armv7l-3.9/bx/bitset_builders.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,049 copying build/lib.linux-armv7l-3.9/bx/filter.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,051 copying build/lib.linux-armv7l-3.9/bx/bitset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,062 creating build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,062 copying build/lib.linux-armv7l-3.9/bx/misc/seeklzop.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,065 copying build/lib.linux-armv7l-3.9/bx/misc/filecache_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,067 copying build/lib.linux-armv7l-3.9/bx/misc/__init__.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,068 copying build/lib.linux-armv7l-3.9/bx/misc/cdb.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,071 copying build/lib.linux-armv7l-3.9/bx/misc/seekbzip2_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,072 copying build/lib.linux-armv7l-3.9/bx/misc/bgzf.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,079 copying build/lib.linux-armv7l-3.9/bx/misc/seeklzop_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,081 copying build/lib.linux-armv7l-3.9/bx/misc/filecache.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,083 copying build/lib.linux-armv7l-3.9/bx/misc/bgzf_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,084 copying build/lib.linux-armv7l-3.9/bx/misc/_seekbzip2.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,093 copying build/lib.linux-armv7l-3.9/bx/misc/seekbzip2.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,095 copying build/lib.linux-armv7l-3.9/bx/misc/readlengths.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,097 copying build/lib.linux-armv7l-3.9/bx/misc/binary_file.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,099 copying build/lib.linux-armv7l-3.9/bx/misc/cdb_tests.py -> build/bdist.linux-armv7l/wheel/bx/misc 2021-07-15T16:17:36,101 copying build/lib.linux-armv7l-3.9/bx/__init__.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,103 copying build/lib.linux-armv7l-3.9/bx/_seqmapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,116 creating build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,117 copying build/lib.linux-armv7l-3.9/bx/seq/_twobit.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,126 copying build/lib.linux-armv7l-3.9/bx/seq/qdna_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,130 copying build/lib.linux-armv7l-3.9/bx/seq/__init__.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,131 copying build/lib.linux-armv7l-3.9/bx/seq/core.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,133 copying build/lib.linux-armv7l-3.9/bx/seq/twobit_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,135 copying build/lib.linux-armv7l-3.9/bx/seq/seq_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,136 copying build/lib.linux-armv7l-3.9/bx/seq/qdna.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,139 copying build/lib.linux-armv7l-3.9/bx/seq/_nib.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,143 copying build/lib.linux-armv7l-3.9/bx/seq/fasta_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,145 copying build/lib.linux-armv7l-3.9/bx/seq/seq.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,147 copying build/lib.linux-armv7l-3.9/bx/seq/nib_tests.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,149 copying build/lib.linux-armv7l-3.9/bx/seq/nib.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,151 copying build/lib.linux-armv7l-3.9/bx/seq/fasta.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,153 copying build/lib.linux-armv7l-3.9/bx/seq/twobit.py -> build/bdist.linux-armv7l/wheel/bx/seq 2021-07-15T16:17:36,156 creating build/bdist.linux-armv7l/wheel/bx/intseq 2021-07-15T16:17:36,157 copying build/lib.linux-armv7l-3.9/bx/intseq/ngramcount.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/intseq 2021-07-15T16:17:36,164 copying build/lib.linux-armv7l-3.9/bx/intseq/__init__.py -> build/bdist.linux-armv7l/wheel/bx/intseq 2021-07-15T16:17:36,166 copying build/lib.linux-armv7l-3.9/bx/binned_array.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,168 copying build/lib.linux-armv7l-3.9/bx/interval_index_file.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,171 copying build/lib.linux-armv7l-3.9/bx/bitset_utils.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,172 copying build/lib.linux-armv7l-3.9/bx/bitset_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,175 creating build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T16:17:36,175 copying build/lib.linux-armv7l-3.9/bx/phylo/__init__.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T16:17:36,177 copying build/lib.linux-armv7l-3.9/bx/phylo/phast_tests.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T16:17:36,179 copying build/lib.linux-armv7l-3.9/bx/phylo/newick_tests.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T16:17:36,181 copying build/lib.linux-armv7l-3.9/bx/phylo/newick.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T16:17:36,183 copying build/lib.linux-armv7l-3.9/bx/phylo/phast.py -> build/bdist.linux-armv7l/wheel/bx/phylo 2021-07-15T16:17:36,184 copying build/lib.linux-armv7l-3.9/bx/interval_index_file_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,187 creating build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T16:17:36,189 creating build/bdist.linux-armv7l/wheel/bx/motif/logo 2021-07-15T16:17:36,190 copying build/lib.linux-armv7l-3.9/bx/motif/logo/__init__.py -> build/bdist.linux-armv7l/wheel/bx/motif/logo 2021-07-15T16:17:36,191 copying build/lib.linux-armv7l-3.9/bx/motif/logo/template.ps -> build/bdist.linux-armv7l/wheel/bx/motif/logo 2021-07-15T16:17:36,193 copying build/lib.linux-armv7l-3.9/bx/motif/pwm_tests.py -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T16:17:36,195 copying build/lib.linux-armv7l-3.9/bx/motif/_pwm.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T16:17:36,200 copying build/lib.linux-armv7l-3.9/bx/motif/__init__.py -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T16:17:36,202 copying build/lib.linux-armv7l-3.9/bx/motif/pwm.py -> build/bdist.linux-armv7l/wheel/bx/motif 2021-07-15T16:17:36,205 creating build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T16:17:36,205 copying build/lib.linux-armv7l-3.9/bx/motif/io/__init__.py -> build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T16:17:36,207 copying build/lib.linux-armv7l-3.9/bx/motif/io/transfac.py -> build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T16:17:36,209 copying build/lib.linux-armv7l-3.9/bx/motif/io/transfac_tests.py -> build/bdist.linux-armv7l/wheel/bx/motif/io 2021-07-15T16:17:36,212 creating build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,213 copying build/lib.linux-armv7l-3.9/bx/pwm/bed_score_aligned_pwm.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,215 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_tests.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,216 copying build/lib.linux-armv7l-3.9/bx/pwm/bed_score_aligned_string.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,218 copying build/lib.linux-armv7l-3.9/bx/pwm/__init__.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,220 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_score_motifs.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,222 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_score_positions.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,224 copying build/lib.linux-armv7l-3.9/bx/pwm/_position_weight_matrix.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,228 copying build/lib.linux-armv7l-3.9/bx/pwm/position_weight_matrix.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,231 copying build/lib.linux-armv7l-3.9/bx/pwm/maf_select_motifs.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,232 copying build/lib.linux-armv7l-3.9/bx/pwm/pwm_score_maf.py -> build/bdist.linux-armv7l/wheel/bx/pwm 2021-07-15T16:17:36,235 creating build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,236 copying build/lib.linux-armv7l-3.9/bx/intervals/random_intervals.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,239 copying build/lib.linux-armv7l-3.9/bx/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,241 copying build/lib.linux-armv7l-3.9/bx/intervals/intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,258 creating build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,259 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/subtract.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,261 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/merge.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,263 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/concat.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,264 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/__init__.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,266 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/complement.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,268 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/intersect.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,270 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/coverage.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,272 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/join.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,274 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/base_coverage.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,275 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/quicksect.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,277 copying build/lib.linux-armv7l-3.9/bx/intervals/operations/find_clusters.py -> build/bdist.linux-armv7l/wheel/bx/intervals/operations 2021-07-15T16:17:36,280 copying build/lib.linux-armv7l-3.9/bx/intervals/cluster_tests.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,281 copying build/lib.linux-armv7l-3.9/bx/intervals/io.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,284 copying build/lib.linux-armv7l-3.9/bx/intervals/cluster.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,289 copying build/lib.linux-armv7l-3.9/bx/intervals/intersection_tests.py -> build/bdist.linux-armv7l/wheel/bx/intervals 2021-07-15T16:17:36,292 creating build/bdist.linux-armv7l/wheel/bx/tabular 2021-07-15T16:17:36,293 copying build/lib.linux-armv7l-3.9/bx/tabular/__init__.py -> build/bdist.linux-armv7l/wheel/bx/tabular 2021-07-15T16:17:36,294 copying build/lib.linux-armv7l-3.9/bx/tabular/io.py -> build/bdist.linux-armv7l/wheel/bx/tabular 2021-07-15T16:17:36,296 copying build/lib.linux-armv7l-3.9/bx/seqmapping_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,299 creating build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,300 copying build/lib.linux-armv7l-3.9/bx/bbi/bigwig_tests.py -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,301 copying build/lib.linux-armv7l-3.9/bx/bbi/__init__.py -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,303 copying build/lib.linux-armv7l-3.9/bx/bbi/bigbed_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,321 copying build/lib.linux-armv7l-3.9/bx/bbi/cirtree_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,337 copying build/lib.linux-armv7l-3.9/bx/bbi/bpt_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,347 copying build/lib.linux-armv7l-3.9/bx/bbi/bigwig_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,370 copying build/lib.linux-armv7l-3.9/bx/bbi/bbi_file.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/bbi 2021-07-15T16:17:36,401 copying build/lib.linux-armv7l-3.9/bx/wiggle_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,403 copying build/lib.linux-armv7l-3.9/bx/gene_reader.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,405 creating build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,406 copying build/lib.linux-armv7l-3.9/bx/align/maf_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,408 copying build/lib.linux-armv7l-3.9/bx/align/__init__.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,410 copying build/lib.linux-armv7l-3.9/bx/align/core.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,412 copying build/lib.linux-armv7l-3.9/bx/align/lav_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,414 copying build/lib.linux-armv7l-3.9/bx/align/score_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,416 copying build/lib.linux-armv7l-3.9/bx/align/score.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,418 copying build/lib.linux-armv7l-3.9/bx/align/maf.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,421 creating build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,422 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/quality.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,424 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/__init__.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,426 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/core.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,427 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/cpg.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,429 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/sitemask_tests.py -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,431 copying build/lib.linux-armv7l-3.9/bx/align/sitemask/_cpg.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/align/sitemask 2021-07-15T16:17:36,439 copying build/lib.linux-armv7l-3.9/bx/align/lav.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,442 creating build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T16:17:36,443 copying build/lib.linux-armv7l-3.9/bx/align/tools/tile.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T16:17:36,445 copying build/lib.linux-armv7l-3.9/bx/align/tools/thread.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T16:17:36,447 copying build/lib.linux-armv7l-3.9/bx/align/tools/__init__.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T16:17:36,449 copying build/lib.linux-armv7l-3.9/bx/align/tools/fuse.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T16:17:36,451 copying build/lib.linux-armv7l-3.9/bx/align/tools/chop.py -> build/bdist.linux-armv7l/wheel/bx/align/tools 2021-07-15T16:17:36,452 copying build/lib.linux-armv7l-3.9/bx/align/epo_tests.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,455 copying build/lib.linux-armv7l-3.9/bx/align/_core.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,459 copying build/lib.linux-armv7l-3.9/bx/align/epo.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,461 copying build/lib.linux-armv7l-3.9/bx/align/axt.py -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,463 copying build/lib.linux-armv7l-3.9/bx/align/_epo.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/align 2021-07-15T16:17:36,481 copying build/lib.linux-armv7l-3.9/bx/binned_array_tests.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,483 copying build/lib.linux-armv7l-3.9/bx/wiggle.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,485 creating build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T16:17:36,486 copying build/lib.linux-armv7l-3.9/bx/cookbook/__init__.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T16:17:36,488 copying build/lib.linux-armv7l-3.9/bx/cookbook/progress_bar.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T16:17:36,489 copying build/lib.linux-armv7l-3.9/bx/cookbook/argparse.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T16:17:36,493 copying build/lib.linux-armv7l-3.9/bx/cookbook/attribute.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T16:17:36,495 copying build/lib.linux-armv7l-3.9/bx/cookbook/doc_optparse.py -> build/bdist.linux-armv7l/wheel/bx/cookbook 2021-07-15T16:17:36,498 creating build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T16:17:36,498 copying build/lib.linux-armv7l-3.9/bx/arrays/__init__.py -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T16:17:36,500 copying build/lib.linux-armv7l-3.9/bx/arrays/wiggle.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T16:17:36,511 copying build/lib.linux-armv7l-3.9/bx/arrays/array_tree_tests.py -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T16:17:36,513 copying build/lib.linux-armv7l-3.9/bx/arrays/array_tree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T16:17:36,546 copying build/lib.linux-armv7l-3.9/bx/arrays/bed.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bx/arrays 2021-07-15T16:17:36,552 copying build/lib.linux-armv7l-3.9/bx/seqmapping.py -> build/bdist.linux-armv7l/wheel/bx 2021-07-15T16:17:36,555 creating build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,555 copying build/lib.linux-armv7l-3.9/bx_extras/__init__.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,557 copying build/lib.linux-armv7l-3.9/bx_extras/stats.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,562 copying build/lib.linux-armv7l-3.9/bx_extras/lrucache.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,564 copying build/lib.linux-armv7l-3.9/bx_extras/pstat.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,567 copying build/lib.linux-armv7l-3.9/bx_extras/fpconst_tests.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,569 copying build/lib.linux-armv7l-3.9/bx_extras/pyparsing.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,574 copying build/lib.linux-armv7l-3.9/bx_extras/fpconst.py -> build/bdist.linux-armv7l/wheel/bx_extras 2021-07-15T16:17:36,575 running install_egg_info 2021-07-15T16:17:36,600 running egg_info 2021-07-15T16:17:36,601 writing lib/bx_python.egg-info/PKG-INFO 2021-07-15T16:17:36,603 writing dependency_links to lib/bx_python.egg-info/dependency_links.txt 2021-07-15T16:17:36,605 writing requirements to lib/bx_python.egg-info/requires.txt 2021-07-15T16:17:36,607 writing top-level names to lib/bx_python.egg-info/top_level.txt 2021-07-15T16:17:36,689 reading manifest file 'lib/bx_python.egg-info/SOURCES.txt' 2021-07-15T16:17:36,704 reading manifest template 'MANIFEST.in' 2021-07-15T16:17:36,705 warning: no files found matching 'distribute_setup.py' 2021-07-15T16:17:36,961 adding license file 'LICENSE' 2021-07-15T16:17:36,980 writing manifest file 'lib/bx_python.egg-info/SOURCES.txt' 2021-07-15T16:17:36,983 Copying lib/bx_python.egg-info to build/bdist.linux-armv7l/wheel/bx_python-0.8.7-py3.9.egg-info 2021-07-15T16:17:36,995 running install_scripts 2021-07-15T16:17:37,061 creating build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data 2021-07-15T16:17:37,062 creating build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,063 copying build/scripts-3.9/maf_covered_regions.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,065 copying build/scripts-3.9/maf_extract_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,069 copying build/scripts-3.9/bed_extend_to.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,071 copying build/scripts-3.9/find_in_sorted_file.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,073 copying build/scripts-3.9/maf_split_by_src.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,074 copying build/scripts-3.9/maf_chunk.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,076 copying build/scripts-3.9/get_scores_in_intervals.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,078 copying build/scripts-3.9/wiggle_to_array_tree.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,081 copying build/scripts-3.9/maf_print_chroms.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,083 copying build/scripts-3.9/table_filter.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,085 copying build/scripts-3.9/bed_merge_overlapping.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,086 copying build/scripts-3.9/wiggle_to_binned_array.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,088 copying build/scripts-3.9/maf_percent_columns_matching.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,090 copying build/scripts-3.9/tfloc_summary.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,092 copying build/scripts-3.9/maf_chop.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,094 copying build/scripts-3.9/lav_to_axt.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,096 copying build/scripts-3.9/nib_chrom_intervals_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,097 copying build/scripts-3.9/bed_coverage.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,099 copying build/scripts-3.9/maf_tile.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,102 copying build/scripts-3.9/gene_fourfold_sites.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,104 copying build/scripts-3.9/maf_shuffle_columns.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,106 copying build/scripts-3.9/maf_build_index.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,108 copying build/scripts-3.9/maf_tile_2.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,111 copying build/scripts-3.9/maf_truncate.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,112 copying build/scripts-3.9/wiggle_to_simple.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,114 copying build/scripts-3.9/maf_filter.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,116 copying build/scripts-3.9/prefix_lines.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,118 copying build/scripts-3.9/mMK_bitset.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,121 copying build/scripts-3.9/maf_species_in_all_files.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,123 copying build/scripts-3.9/maf_to_axt.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,124 copying build/scripts-3.9/maf_extract_ranges_indexed.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,127 copying build/scripts-3.9/bed_intersect.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,129 copying build/scripts-3.9/maf_interval_alignibility.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,131 copying build/scripts-3.9/maf_translate_chars.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,133 copying build/scripts-3.9/maf_limit_to_species.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,135 copying build/scripts-3.9/maf_to_int_seqs.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,136 copying build/scripts-3.9/axt_to_maf.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,139 copying build/scripts-3.9/axt_to_lav.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,141 copying build/scripts-3.9/bed_count_by_interval.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,143 copying build/scripts-3.9/maf_randomize.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,145 copying build/scripts-3.9/maf_extract_chrom_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,147 copying build/scripts-3.9/aggregate_scores_in_intervals.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,149 copying build/scripts-3.9/maf_covered_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,151 copying build/scripts-3.9/lzop_build_offset_table.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,153 copying build/scripts-3.9/nib_intervals_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,155 copying build/scripts-3.9/bed_rand_intersect.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,157 copying build/scripts-3.9/maf_div_sites.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,159 copying build/scripts-3.9/maf_to_concat_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,161 copying build/scripts-3.9/table_add_column.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,163 copying build/scripts-3.9/bed_build_windows.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,164 copying build/scripts-3.9/wiggle_to_chr_binned_array.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,166 copying build/scripts-3.9/bnMapper.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,169 copying build/scripts-3.9/maf_mapping_word_frequency.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,171 copying build/scripts-3.9/maf_col_counts.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,173 copying build/scripts-3.9/random_lines.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,175 copying build/scripts-3.9/maf_thread_for_species.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,177 copying build/scripts-3.9/maf_gc_content.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,179 copying build/scripts-3.9/maf_drop_overlapping.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,180 copying build/scripts-3.9/interval_count_intersections.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,182 copying build/scripts-3.9/bed_count_overlapping.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,184 copying build/scripts-3.9/maf_mean_length_ungapped_piece.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,186 copying build/scripts-3.9/maf_col_counts_all.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,188 copying build/scripts-3.9/maf_word_frequency.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,190 copying build/scripts-3.9/nib_length.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,191 copying build/scripts-3.9/maf_mask_cpg.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,193 copying build/scripts-3.9/int_seqs_to_char_strings.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,195 copying build/scripts-3.9/bed_subtract_basewise.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,197 copying build/scripts-3.9/mask_quality.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,199 copying build/scripts-3.9/maf_percent_identity.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,201 copying build/scripts-3.9/maf_gap_frequency.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,202 copying build/scripts-3.9/bed_intersect_basewise.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,204 copying build/scripts-3.9/maf_tile_2bit.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,207 copying build/scripts-3.9/lav_to_maf.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,209 copying build/scripts-3.9/ucsc_gene_table_to_intervals.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,211 copying build/scripts-3.9/maf_select.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,213 copying build/scripts-3.9/line_select.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,215 copying build/scripts-3.9/maf_count.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,216 copying build/scripts-3.9/div_snp_table_chr.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,219 copying build/scripts-3.9/align_print_template.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,220 copying build/scripts-3.9/bed_bigwig_profile.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,222 copying build/scripts-3.9/maf_print_scores.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,224 copying build/scripts-3.9/out_to_chain.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,226 copying build/scripts-3.9/interval_join.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,228 copying build/scripts-3.9/maf_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,230 copying build/scripts-3.9/maf_region_coverage_by_src.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,232 copying build/scripts-3.9/bed_complement.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,233 copying build/scripts-3.9/bed_coverage_by_interval.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,235 copying build/scripts-3.9/axt_to_fasta.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,237 copying build/scripts-3.9/one_field_per_line.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,239 copying build/scripts-3.9/pretty_table.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,241 copying build/scripts-3.9/axt_extract_ranges.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,242 copying build/scripts-3.9/maf_filter_max_wc.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,244 copying build/scripts-3.9/qv_to_bqv.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,246 copying build/scripts-3.9/bed_diff_basewise_summary.py -> build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts 2021-07-15T16:17:37,248 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_covered_regions.py to 755 2021-07-15T16:17:37,248 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_extract_ranges.py to 755 2021-07-15T16:17:37,248 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_extend_to.py to 755 2021-07-15T16:17:37,249 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/find_in_sorted_file.py to 755 2021-07-15T16:17:37,249 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_split_by_src.py to 755 2021-07-15T16:17:37,249 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_chunk.py to 755 2021-07-15T16:17:37,250 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/get_scores_in_intervals.py to 755 2021-07-15T16:17:37,250 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/wiggle_to_array_tree.py to 755 2021-07-15T16:17:37,250 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_print_chroms.py to 755 2021-07-15T16:17:37,250 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/table_filter.py to 755 2021-07-15T16:17:37,251 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_merge_overlapping.py to 755 2021-07-15T16:17:37,251 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/wiggle_to_binned_array.py to 755 2021-07-15T16:17:37,251 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_percent_columns_matching.py to 755 2021-07-15T16:17:37,251 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/tfloc_summary.py to 755 2021-07-15T16:17:37,252 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_chop.py to 755 2021-07-15T16:17:37,252 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/lav_to_axt.py to 755 2021-07-15T16:17:37,252 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/nib_chrom_intervals_to_fasta.py to 755 2021-07-15T16:17:37,252 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_coverage.py to 755 2021-07-15T16:17:37,253 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_tile.py to 755 2021-07-15T16:17:37,253 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/gene_fourfold_sites.py to 755 2021-07-15T16:17:37,253 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_shuffle_columns.py to 755 2021-07-15T16:17:37,254 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_build_index.py to 755 2021-07-15T16:17:37,254 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_tile_2.py to 755 2021-07-15T16:17:37,254 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_truncate.py to 755 2021-07-15T16:17:37,254 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/wiggle_to_simple.py to 755 2021-07-15T16:17:37,255 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_filter.py to 755 2021-07-15T16:17:37,255 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/prefix_lines.py to 755 2021-07-15T16:17:37,255 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/mMK_bitset.py to 755 2021-07-15T16:17:37,255 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_species_in_all_files.py to 755 2021-07-15T16:17:37,256 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_to_axt.py to 755 2021-07-15T16:17:37,256 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_extract_ranges_indexed.py to 755 2021-07-15T16:17:37,256 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_intersect.py to 755 2021-07-15T16:17:37,256 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_interval_alignibility.py to 755 2021-07-15T16:17:37,257 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_translate_chars.py to 755 2021-07-15T16:17:37,257 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_limit_to_species.py to 755 2021-07-15T16:17:37,257 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_to_int_seqs.py to 755 2021-07-15T16:17:37,257 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/axt_to_maf.py to 755 2021-07-15T16:17:37,258 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/axt_to_lav.py to 755 2021-07-15T16:17:37,258 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_count_by_interval.py to 755 2021-07-15T16:17:37,258 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_randomize.py to 755 2021-07-15T16:17:37,258 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_extract_chrom_ranges.py to 755 2021-07-15T16:17:37,259 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/aggregate_scores_in_intervals.py to 755 2021-07-15T16:17:37,259 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_covered_ranges.py to 755 2021-07-15T16:17:37,260 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/lzop_build_offset_table.py to 755 2021-07-15T16:17:37,261 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/nib_intervals_to_fasta.py to 755 2021-07-15T16:17:37,261 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_rand_intersect.py to 755 2021-07-15T16:17:37,262 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_div_sites.py to 755 2021-07-15T16:17:37,262 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_to_concat_fasta.py to 755 2021-07-15T16:17:37,263 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/table_add_column.py to 755 2021-07-15T16:17:37,263 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_build_windows.py to 755 2021-07-15T16:17:37,264 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/wiggle_to_chr_binned_array.py to 755 2021-07-15T16:17:37,264 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bnMapper.py to 755 2021-07-15T16:17:37,264 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_mapping_word_frequency.py to 755 2021-07-15T16:17:37,265 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_col_counts.py to 755 2021-07-15T16:17:37,265 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/random_lines.py to 755 2021-07-15T16:17:37,266 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_thread_for_species.py to 755 2021-07-15T16:17:37,266 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_gc_content.py to 755 2021-07-15T16:17:37,267 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_drop_overlapping.py to 755 2021-07-15T16:17:37,267 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/interval_count_intersections.py to 755 2021-07-15T16:17:37,268 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_count_overlapping.py to 755 2021-07-15T16:17:37,268 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_mean_length_ungapped_piece.py to 755 2021-07-15T16:17:37,269 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_col_counts_all.py to 755 2021-07-15T16:17:37,269 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_word_frequency.py to 755 2021-07-15T16:17:37,270 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/nib_length.py to 755 2021-07-15T16:17:37,270 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_mask_cpg.py to 755 2021-07-15T16:17:37,271 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/int_seqs_to_char_strings.py to 755 2021-07-15T16:17:37,271 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_subtract_basewise.py to 755 2021-07-15T16:17:37,272 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/mask_quality.py to 755 2021-07-15T16:17:37,272 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_percent_identity.py to 755 2021-07-15T16:17:37,273 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_gap_frequency.py to 755 2021-07-15T16:17:37,273 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_intersect_basewise.py to 755 2021-07-15T16:17:37,273 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_tile_2bit.py to 755 2021-07-15T16:17:37,274 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/lav_to_maf.py to 755 2021-07-15T16:17:37,275 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/ucsc_gene_table_to_intervals.py to 755 2021-07-15T16:17:37,275 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_select.py to 755 2021-07-15T16:17:37,275 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/line_select.py to 755 2021-07-15T16:17:37,275 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_count.py to 755 2021-07-15T16:17:37,276 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/div_snp_table_chr.py to 755 2021-07-15T16:17:37,276 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/align_print_template.py to 755 2021-07-15T16:17:37,276 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_bigwig_profile.py to 755 2021-07-15T16:17:37,277 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_print_scores.py to 755 2021-07-15T16:17:37,278 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/out_to_chain.py to 755 2021-07-15T16:17:37,279 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/interval_join.py to 755 2021-07-15T16:17:37,280 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_to_fasta.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_region_coverage_by_src.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_complement.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_coverage_by_interval.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/axt_to_fasta.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/one_field_per_line.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/pretty_table.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/axt_extract_ranges.py to 755 2021-07-15T16:17:37,281 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/maf_filter_max_wc.py to 755 2021-07-15T16:17:37,282 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/qv_to_bqv.py to 755 2021-07-15T16:17:37,282 changing mode of build/bdist.linux-armv7l/wheel/bx_python-0.8.7.data/scripts/bed_diff_basewise_summary.py to 755 2021-07-15T16:17:37,299 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-15T16:17:37,304 creating build/bdist.linux-armv7l/wheel/bx_python-0.8.7.dist-info/WHEEL 2021-07-15T16:17:37,306 creating '/tmp/pip-wheel-dvnq3fxl/bx_python-0.8.7-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-15T16:17:37,308 adding 'psyco_full.py' 2021-07-15T16:17:37,311 adding 'bx/__init__.py' 2021-07-15T16:17:37,392 adding 'bx/_seqmapping.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:37,397 adding 'bx/binned_array.py' 2021-07-15T16:17:37,399 adding 'bx/binned_array_tests.py' 2021-07-15T16:17:37,485 adding 'bx/bitset.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:37,490 adding 'bx/bitset_builders.py' 2021-07-15T16:17:37,492 adding 'bx/bitset_tests.py' 2021-07-15T16:17:37,493 adding 'bx/bitset_utils.py' 2021-07-15T16:17:37,495 adding 'bx/filter.py' 2021-07-15T16:17:37,497 adding 'bx/gene_reader.py' 2021-07-15T16:17:37,500 adding 'bx/interval_index_file.py' 2021-07-15T16:17:37,502 adding 'bx/interval_index_file_tests.py' 2021-07-15T16:17:37,503 adding 'bx/seqmapping.py' 2021-07-15T16:17:37,505 adding 'bx/seqmapping_tests.py' 2021-07-15T16:17:37,506 adding 'bx/wiggle.py' 2021-07-15T16:17:37,508 adding 'bx/wiggle_tests.py' 2021-07-15T16:17:37,510 adding 'bx/align/__init__.py' 2021-07-15T16:17:37,524 adding 'bx/align/_core.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:37,672 adding 'bx/align/_epo.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:37,679 adding 'bx/align/axt.py' 2021-07-15T16:17:37,682 adding 'bx/align/core.py' 2021-07-15T16:17:37,685 adding 'bx/align/epo.py' 2021-07-15T16:17:37,687 adding 'bx/align/epo_tests.py' 2021-07-15T16:17:37,690 adding 'bx/align/lav.py' 2021-07-15T16:17:37,692 adding 'bx/align/lav_tests.py' 2021-07-15T16:17:37,694 adding 'bx/align/maf.py' 2021-07-15T16:17:37,696 adding 'bx/align/maf_tests.py' 2021-07-15T16:17:37,698 adding 'bx/align/score.py' 2021-07-15T16:17:37,700 adding 'bx/align/score_tests.py' 2021-07-15T16:17:37,702 adding 'bx/align/sitemask/__init__.py' 2021-07-15T16:17:37,750 adding 'bx/align/sitemask/_cpg.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:37,754 adding 'bx/align/sitemask/core.py' 2021-07-15T16:17:37,755 adding 'bx/align/sitemask/cpg.py' 2021-07-15T16:17:37,757 adding 'bx/align/sitemask/quality.py' 2021-07-15T16:17:37,759 adding 'bx/align/sitemask/sitemask_tests.py' 2021-07-15T16:17:37,761 adding 'bx/align/tools/__init__.py' 2021-07-15T16:17:37,762 adding 'bx/align/tools/chop.py' 2021-07-15T16:17:37,764 adding 'bx/align/tools/fuse.py' 2021-07-15T16:17:37,766 adding 'bx/align/tools/thread.py' 2021-07-15T16:17:37,767 adding 'bx/align/tools/tile.py' 2021-07-15T16:17:37,769 adding 'bx/arrays/__init__.py' 2021-07-15T16:17:38,072 adding 'bx/arrays/array_tree.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:38,086 adding 'bx/arrays/array_tree_tests.py' 2021-07-15T16:17:38,132 adding 'bx/arrays/bed.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:38,211 adding 'bx/arrays/wiggle.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:38,216 adding 'bx/bbi/__init__.py' 2021-07-15T16:17:38,470 adding 'bx/bbi/bbi_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:38,615 adding 'bx/bbi/bigbed_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:38,810 adding 'bx/bbi/bigwig_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:38,820 adding 'bx/bbi/bigwig_tests.py' 2021-07-15T16:17:38,901 adding 'bx/bbi/bpt_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,027 adding 'bx/bbi/cirtree_file.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,034 adding 'bx/cookbook/__init__.py' 2021-07-15T16:17:39,045 adding 'bx/cookbook/argparse.py' 2021-07-15T16:17:39,048 adding 'bx/cookbook/attribute.py' 2021-07-15T16:17:39,049 adding 'bx/cookbook/doc_optparse.py' 2021-07-15T16:17:39,051 adding 'bx/cookbook/progress_bar.py' 2021-07-15T16:17:39,054 adding 'bx/intervals/__init__.py' 2021-07-15T16:17:39,085 adding 'bx/intervals/cluster.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,088 adding 'bx/intervals/cluster_tests.py' 2021-07-15T16:17:39,216 adding 'bx/intervals/intersection.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,223 adding 'bx/intervals/intersection_tests.py' 2021-07-15T16:17:39,225 adding 'bx/intervals/io.py' 2021-07-15T16:17:39,228 adding 'bx/intervals/random_intervals.py' 2021-07-15T16:17:39,230 adding 'bx/intervals/operations/__init__.py' 2021-07-15T16:17:39,231 adding 'bx/intervals/operations/base_coverage.py' 2021-07-15T16:17:39,233 adding 'bx/intervals/operations/complement.py' 2021-07-15T16:17:39,234 adding 'bx/intervals/operations/concat.py' 2021-07-15T16:17:39,236 adding 'bx/intervals/operations/coverage.py' 2021-07-15T16:17:39,238 adding 'bx/intervals/operations/find_clusters.py' 2021-07-15T16:17:39,239 adding 'bx/intervals/operations/intersect.py' 2021-07-15T16:17:39,241 adding 'bx/intervals/operations/join.py' 2021-07-15T16:17:39,243 adding 'bx/intervals/operations/merge.py' 2021-07-15T16:17:39,245 adding 'bx/intervals/operations/quicksect.py' 2021-07-15T16:17:39,246 adding 'bx/intervals/operations/subtract.py' 2021-07-15T16:17:39,249 adding 'bx/intseq/__init__.py' 2021-07-15T16:17:39,279 adding 'bx/intseq/ngramcount.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,283 adding 'bx/misc/__init__.py' 2021-07-15T16:17:39,324 adding 'bx/misc/_seekbzip2.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,362 adding 'bx/misc/bgzf.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,365 adding 'bx/misc/bgzf_tests.py' 2021-07-15T16:17:39,367 adding 'bx/misc/binary_file.py' 2021-07-15T16:17:39,368 adding 'bx/misc/cdb.py' 2021-07-15T16:17:39,370 adding 'bx/misc/cdb_tests.py' 2021-07-15T16:17:39,372 adding 'bx/misc/filecache.py' 2021-07-15T16:17:39,373 adding 'bx/misc/filecache_tests.py' 2021-07-15T16:17:39,374 adding 'bx/misc/readlengths.py' 2021-07-15T16:17:39,376 adding 'bx/misc/seekbzip2.py' 2021-07-15T16:17:39,378 adding 'bx/misc/seekbzip2_tests.py' 2021-07-15T16:17:39,379 adding 'bx/misc/seeklzop.py' 2021-07-15T16:17:39,381 adding 'bx/misc/seeklzop_tests.py' 2021-07-15T16:17:39,383 adding 'bx/motif/__init__.py' 2021-07-15T16:17:39,404 adding 'bx/motif/_pwm.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,406 adding 'bx/motif/pwm.py' 2021-07-15T16:17:39,408 adding 'bx/motif/pwm_tests.py' 2021-07-15T16:17:39,410 adding 'bx/motif/io/__init__.py' 2021-07-15T16:17:39,412 adding 'bx/motif/io/transfac.py' 2021-07-15T16:17:39,413 adding 'bx/motif/io/transfac_tests.py' 2021-07-15T16:17:39,416 adding 'bx/motif/logo/__init__.py' 2021-07-15T16:17:39,417 adding 'bx/motif/logo/template.ps' 2021-07-15T16:17:39,419 adding 'bx/phylo/__init__.py' 2021-07-15T16:17:39,421 adding 'bx/phylo/newick.py' 2021-07-15T16:17:39,422 adding 'bx/phylo/newick_tests.py' 2021-07-15T16:17:39,424 adding 'bx/phylo/phast.py' 2021-07-15T16:17:39,426 adding 'bx/phylo/phast_tests.py' 2021-07-15T16:17:39,428 adding 'bx/pwm/__init__.py' 2021-07-15T16:17:39,443 adding 'bx/pwm/_position_weight_matrix.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,445 adding 'bx/pwm/bed_score_aligned_pwm.py' 2021-07-15T16:17:39,447 adding 'bx/pwm/bed_score_aligned_string.py' 2021-07-15T16:17:39,448 adding 'bx/pwm/maf_select_motifs.py' 2021-07-15T16:17:39,452 adding 'bx/pwm/position_weight_matrix.py' 2021-07-15T16:17:39,454 adding 'bx/pwm/pwm_score_maf.py' 2021-07-15T16:17:39,456 adding 'bx/pwm/pwm_score_motifs.py' 2021-07-15T16:17:39,458 adding 'bx/pwm/pwm_score_positions.py' 2021-07-15T16:17:39,459 adding 'bx/pwm/pwm_tests.py' 2021-07-15T16:17:39,461 adding 'bx/seq/__init__.py' 2021-07-15T16:17:39,479 adding 'bx/seq/_nib.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,518 adding 'bx/seq/_twobit.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:17:39,522 adding 'bx/seq/core.py' 2021-07-15T16:17:39,523 adding 'bx/seq/fasta.py' 2021-07-15T16:17:39,525 adding 'bx/seq/fasta_tests.py' 2021-07-15T16:17:39,526 adding 'bx/seq/nib.py' 2021-07-15T16:17:39,528 adding 'bx/seq/nib_tests.py' 2021-07-15T16:17:39,530 adding 'bx/seq/qdna.py' 2021-07-15T16:17:39,531 adding 'bx/seq/qdna_tests.py' 2021-07-15T16:17:39,533 adding 'bx/seq/seq.py' 2021-07-15T16:17:39,535 adding 'bx/seq/seq_tests.py' 2021-07-15T16:17:39,536 adding 'bx/seq/twobit.py' 2021-07-15T16:17:39,538 adding 'bx/seq/twobit_tests.py' 2021-07-15T16:17:39,540 adding 'bx/tabular/__init__.py' 2021-07-15T16:17:39,541 adding 'bx/tabular/io.py' 2021-07-15T16:17:39,543 adding 'bx_extras/__init__.py' 2021-07-15T16:17:39,545 adding 'bx_extras/fpconst.py' 2021-07-15T16:17:39,547 adding 'bx_extras/fpconst_tests.py' 2021-07-15T16:17:39,548 adding 'bx_extras/lrucache.py' 2021-07-15T16:17:39,554 adding 'bx_extras/pstat.py' 2021-07-15T16:17:39,572 adding 'bx_extras/pyparsing.py' 2021-07-15T16:17:39,591 adding 'bx_extras/stats.py' 2021-07-15T16:17:39,596 adding 'bx_python-0.8.7.data/scripts/aggregate_scores_in_intervals.py' 2021-07-15T16:17:39,597 adding 'bx_python-0.8.7.data/scripts/align_print_template.py' 2021-07-15T16:17:39,599 adding 'bx_python-0.8.7.data/scripts/axt_extract_ranges.py' 2021-07-15T16:17:39,600 adding 'bx_python-0.8.7.data/scripts/axt_to_fasta.py' 2021-07-15T16:17:39,601 adding 'bx_python-0.8.7.data/scripts/axt_to_lav.py' 2021-07-15T16:17:39,602 adding 'bx_python-0.8.7.data/scripts/axt_to_maf.py' 2021-07-15T16:17:39,604 adding 'bx_python-0.8.7.data/scripts/bed_bigwig_profile.py' 2021-07-15T16:17:39,605 adding 'bx_python-0.8.7.data/scripts/bed_build_windows.py' 2021-07-15T16:17:39,606 adding 'bx_python-0.8.7.data/scripts/bed_complement.py' 2021-07-15T16:17:39,607 adding 'bx_python-0.8.7.data/scripts/bed_count_by_interval.py' 2021-07-15T16:17:39,608 adding 'bx_python-0.8.7.data/scripts/bed_count_overlapping.py' 2021-07-15T16:17:39,609 adding 'bx_python-0.8.7.data/scripts/bed_coverage.py' 2021-07-15T16:17:39,610 adding 'bx_python-0.8.7.data/scripts/bed_coverage_by_interval.py' 2021-07-15T16:17:39,612 adding 'bx_python-0.8.7.data/scripts/bed_diff_basewise_summary.py' 2021-07-15T16:17:39,613 adding 'bx_python-0.8.7.data/scripts/bed_extend_to.py' 2021-07-15T16:17:39,614 adding 'bx_python-0.8.7.data/scripts/bed_intersect.py' 2021-07-15T16:17:39,615 adding 'bx_python-0.8.7.data/scripts/bed_intersect_basewise.py' 2021-07-15T16:17:39,616 adding 'bx_python-0.8.7.data/scripts/bed_merge_overlapping.py' 2021-07-15T16:17:39,618 adding 'bx_python-0.8.7.data/scripts/bed_rand_intersect.py' 2021-07-15T16:17:39,619 adding 'bx_python-0.8.7.data/scripts/bed_subtract_basewise.py' 2021-07-15T16:17:39,622 adding 'bx_python-0.8.7.data/scripts/bnMapper.py' 2021-07-15T16:17:39,623 adding 'bx_python-0.8.7.data/scripts/div_snp_table_chr.py' 2021-07-15T16:17:39,628 adding 'bx_python-0.8.7.data/scripts/find_in_sorted_file.py' 2021-07-15T16:17:39,630 adding 'bx_python-0.8.7.data/scripts/gene_fourfold_sites.py' 2021-07-15T16:17:39,631 adding 'bx_python-0.8.7.data/scripts/get_scores_in_intervals.py' 2021-07-15T16:17:39,632 adding 'bx_python-0.8.7.data/scripts/int_seqs_to_char_strings.py' 2021-07-15T16:17:39,634 adding 'bx_python-0.8.7.data/scripts/interval_count_intersections.py' 2021-07-15T16:17:39,635 adding 'bx_python-0.8.7.data/scripts/interval_join.py' 2021-07-15T16:17:39,636 adding 'bx_python-0.8.7.data/scripts/lav_to_axt.py' 2021-07-15T16:17:39,637 adding 'bx_python-0.8.7.data/scripts/lav_to_maf.py' 2021-07-15T16:17:39,638 adding 'bx_python-0.8.7.data/scripts/line_select.py' 2021-07-15T16:17:39,639 adding 'bx_python-0.8.7.data/scripts/lzop_build_offset_table.py' 2021-07-15T16:17:39,641 adding 'bx_python-0.8.7.data/scripts/mMK_bitset.py' 2021-07-15T16:17:39,642 adding 'bx_python-0.8.7.data/scripts/maf_build_index.py' 2021-07-15T16:17:39,644 adding 'bx_python-0.8.7.data/scripts/maf_chop.py' 2021-07-15T16:17:39,645 adding 'bx_python-0.8.7.data/scripts/maf_chunk.py' 2021-07-15T16:17:39,646 adding 'bx_python-0.8.7.data/scripts/maf_col_counts.py' 2021-07-15T16:17:39,647 adding 'bx_python-0.8.7.data/scripts/maf_col_counts_all.py' 2021-07-15T16:17:39,648 adding 'bx_python-0.8.7.data/scripts/maf_count.py' 2021-07-15T16:17:39,650 adding 'bx_python-0.8.7.data/scripts/maf_covered_ranges.py' 2021-07-15T16:17:39,651 adding 'bx_python-0.8.7.data/scripts/maf_covered_regions.py' 2021-07-15T16:17:39,652 adding 'bx_python-0.8.7.data/scripts/maf_div_sites.py' 2021-07-15T16:17:39,653 adding 'bx_python-0.8.7.data/scripts/maf_drop_overlapping.py' 2021-07-15T16:17:39,655 adding 'bx_python-0.8.7.data/scripts/maf_extract_chrom_ranges.py' 2021-07-15T16:17:39,656 adding 'bx_python-0.8.7.data/scripts/maf_extract_ranges.py' 2021-07-15T16:17:39,657 adding 'bx_python-0.8.7.data/scripts/maf_extract_ranges_indexed.py' 2021-07-15T16:17:39,658 adding 'bx_python-0.8.7.data/scripts/maf_filter.py' 2021-07-15T16:17:39,660 adding 'bx_python-0.8.7.data/scripts/maf_filter_max_wc.py' 2021-07-15T16:17:39,661 adding 'bx_python-0.8.7.data/scripts/maf_gap_frequency.py' 2021-07-15T16:17:39,662 adding 'bx_python-0.8.7.data/scripts/maf_gc_content.py' 2021-07-15T16:17:39,663 adding 'bx_python-0.8.7.data/scripts/maf_interval_alignibility.py' 2021-07-15T16:17:39,664 adding 'bx_python-0.8.7.data/scripts/maf_limit_to_species.py' 2021-07-15T16:17:39,665 adding 'bx_python-0.8.7.data/scripts/maf_mapping_word_frequency.py' 2021-07-15T16:17:39,667 adding 'bx_python-0.8.7.data/scripts/maf_mask_cpg.py' 2021-07-15T16:17:39,668 adding 'bx_python-0.8.7.data/scripts/maf_mean_length_ungapped_piece.py' 2021-07-15T16:17:39,669 adding 'bx_python-0.8.7.data/scripts/maf_percent_columns_matching.py' 2021-07-15T16:17:39,670 adding 'bx_python-0.8.7.data/scripts/maf_percent_identity.py' 2021-07-15T16:17:39,671 adding 'bx_python-0.8.7.data/scripts/maf_print_chroms.py' 2021-07-15T16:17:39,672 adding 'bx_python-0.8.7.data/scripts/maf_print_scores.py' 2021-07-15T16:17:39,673 adding 'bx_python-0.8.7.data/scripts/maf_randomize.py' 2021-07-15T16:17:39,675 adding 'bx_python-0.8.7.data/scripts/maf_region_coverage_by_src.py' 2021-07-15T16:17:39,676 adding 'bx_python-0.8.7.data/scripts/maf_select.py' 2021-07-15T16:17:39,677 adding 'bx_python-0.8.7.data/scripts/maf_shuffle_columns.py' 2021-07-15T16:17:39,678 adding 'bx_python-0.8.7.data/scripts/maf_species_in_all_files.py' 2021-07-15T16:17:39,679 adding 'bx_python-0.8.7.data/scripts/maf_split_by_src.py' 2021-07-15T16:17:39,680 adding 'bx_python-0.8.7.data/scripts/maf_thread_for_species.py' 2021-07-15T16:17:39,682 adding 'bx_python-0.8.7.data/scripts/maf_tile.py' 2021-07-15T16:17:39,684 adding 'bx_python-0.8.7.data/scripts/maf_tile_2.py' 2021-07-15T16:17:39,686 adding 'bx_python-0.8.7.data/scripts/maf_tile_2bit.py' 2021-07-15T16:17:39,687 adding 'bx_python-0.8.7.data/scripts/maf_to_axt.py' 2021-07-15T16:17:39,688 adding 'bx_python-0.8.7.data/scripts/maf_to_concat_fasta.py' 2021-07-15T16:17:39,690 adding 'bx_python-0.8.7.data/scripts/maf_to_fasta.py' 2021-07-15T16:17:39,691 adding 'bx_python-0.8.7.data/scripts/maf_to_int_seqs.py' 2021-07-15T16:17:39,692 adding 'bx_python-0.8.7.data/scripts/maf_translate_chars.py' 2021-07-15T16:17:39,693 adding 'bx_python-0.8.7.data/scripts/maf_truncate.py' 2021-07-15T16:17:39,694 adding 'bx_python-0.8.7.data/scripts/maf_word_frequency.py' 2021-07-15T16:17:39,695 adding 'bx_python-0.8.7.data/scripts/mask_quality.py' 2021-07-15T16:17:39,697 adding 'bx_python-0.8.7.data/scripts/nib_chrom_intervals_to_fasta.py' 2021-07-15T16:17:39,698 adding 'bx_python-0.8.7.data/scripts/nib_intervals_to_fasta.py' 2021-07-15T16:17:39,699 adding 'bx_python-0.8.7.data/scripts/nib_length.py' 2021-07-15T16:17:39,700 adding 'bx_python-0.8.7.data/scripts/one_field_per_line.py' 2021-07-15T16:17:39,701 adding 'bx_python-0.8.7.data/scripts/out_to_chain.py' 2021-07-15T16:17:39,702 adding 'bx_python-0.8.7.data/scripts/prefix_lines.py' 2021-07-15T16:17:39,703 adding 'bx_python-0.8.7.data/scripts/pretty_table.py' 2021-07-15T16:17:39,705 adding 'bx_python-0.8.7.data/scripts/qv_to_bqv.py' 2021-07-15T16:17:39,706 adding 'bx_python-0.8.7.data/scripts/random_lines.py' 2021-07-15T16:17:39,707 adding 'bx_python-0.8.7.data/scripts/table_add_column.py' 2021-07-15T16:17:39,708 adding 'bx_python-0.8.7.data/scripts/table_filter.py' 2021-07-15T16:17:39,709 adding 'bx_python-0.8.7.data/scripts/tfloc_summary.py' 2021-07-15T16:17:39,711 adding 'bx_python-0.8.7.data/scripts/ucsc_gene_table_to_intervals.py' 2021-07-15T16:17:39,712 adding 'bx_python-0.8.7.data/scripts/wiggle_to_array_tree.py' 2021-07-15T16:17:39,713 adding 'bx_python-0.8.7.data/scripts/wiggle_to_binned_array.py' 2021-07-15T16:17:39,714 adding 'bx_python-0.8.7.data/scripts/wiggle_to_chr_binned_array.py' 2021-07-15T16:17:39,715 adding 'bx_python-0.8.7.data/scripts/wiggle_to_simple.py' 2021-07-15T16:17:39,718 adding 'bx_python-0.8.7.dist-info/LICENSE' 2021-07-15T16:17:39,719 adding 'bx_python-0.8.7.dist-info/METADATA' 2021-07-15T16:17:39,720 adding 'bx_python-0.8.7.dist-info/WHEEL' 2021-07-15T16:17:39,728 adding 'bx_python-0.8.7.dist-info/top_level.txt' 2021-07-15T16:17:39,728 adding 'bx_python-0.8.7.dist-info/RECORD' 2021-07-15T16:17:39,793 removing build/bdist.linux-armv7l/wheel 2021-07-15T16:17:40,049 Building wheel for bx-python (setup.py): finished with status 'done' 2021-07-15T16:17:40,100 Created wheel for bx-python: filename=bx_python-0.8.7-cp39-cp39-linux_armv7l.whl size=3947539 sha256=609b7d2963161f28a7f1d73eeeabb317269f1127fb0f570f3f29de1c1aa32192 2021-07-15T16:17:40,101 Stored in directory: /tmp/pip-ephem-wheel-cache-r1328tib/wheels/d5/e4/34/5fe54f0f7925e728aece17b37e6d02760d6fbbeec11f9aa683 2021-07-15T16:17:40,119 Successfully built bx-python 2021-07-15T16:17:40,244 Removed build tracker: '/tmp/pip-req-tracker-ldpb831k'