2021-07-15T16:52:40,437 Created temporary directory: /tmp/pip-ephem-wheel-cache-a2mcj3r2
2021-07-15T16:52:40,441 Created temporary directory: /tmp/pip-req-tracker-o5733whd
2021-07-15T16:52:40,441 Initialized build tracking at /tmp/pip-req-tracker-o5733whd
2021-07-15T16:52:40,442 Created build tracker: /tmp/pip-req-tracker-o5733whd
2021-07-15T16:52:40,442 Entered build tracker: /tmp/pip-req-tracker-o5733whd
2021-07-15T16:52:40,443 Created temporary directory: /tmp/pip-wheel-hgix9_xh
2021-07-15T16:52:40,514 1 location(s) to search for versions of evgraf:
2021-07-15T16:52:40,514 * https://pypi.org/simple/evgraf/
2021-07-15T16:52:40,515 Fetching project page and analyzing links: https://pypi.org/simple/evgraf/
2021-07-15T16:52:40,516 Getting page https://pypi.org/simple/evgraf/
2021-07-15T16:52:40,519 Found index url https://pypi.org/simple
2021-07-15T16:52:40,761   Found link https://files.pythonhosted.org/packages/f2/93/c23ecf07592c0acaf91d12118429326f624b319589962c1928e7eb2a05a3/evgraf-0.1.6.tar.gz#sha256=61f2a7def93fcd8d0455e97df0bdb4a9de337e5167d3745aa92becfbf1828e43 (from https://pypi.org/simple/evgraf/) (requires-python:>=3.5.0), version: 0.1.6
2021-07-15T16:52:40,762 Skipping link: not a file: https://pypi.org/simple/evgraf/
2021-07-15T16:52:40,800 Given no hashes to check 1 links for project 'evgraf': discarding no candidates
2021-07-15T16:52:40,832 Collecting evgraf==0.1.6
2021-07-15T16:52:40,835   Created temporary directory: /tmp/pip-unpack-pcdt5cr4
2021-07-15T16:52:41,029   Downloading evgraf-0.1.6.tar.gz (17 kB)
2021-07-15T16:52:41,209   Added evgraf==0.1.6 from https://files.pythonhosted.org/packages/f2/93/c23ecf07592c0acaf91d12118429326f624b319589962c1928e7eb2a05a3/evgraf-0.1.6.tar.gz#sha256=61f2a7def93fcd8d0455e97df0bdb4a9de337e5167d3745aa92becfbf1828e43 to build tracker '/tmp/pip-req-tracker-o5733whd'
2021-07-15T16:52:41,211     Running setup.py (path:/tmp/pip-wheel-hgix9_xh/evgraf_87bc328e401445f386415b679fe5df90/setup.py) egg_info for package evgraf
2021-07-15T16:52:41,212     Created temporary directory: /tmp/pip-pip-egg-info-0axb03gl
2021-07-15T16:52:41,213     Running command python setup.py egg_info
2021-07-15T16:52:43,651     running egg_info
2021-07-15T16:52:43,656     creating /tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info
2021-07-15T16:52:43,658     writing /tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/PKG-INFO
2021-07-15T16:52:43,661     writing dependency_links to /tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/dependency_links.txt
2021-07-15T16:52:43,665     writing requirements to /tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/requires.txt
2021-07-15T16:52:43,667     writing top-level names to /tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/top_level.txt
2021-07-15T16:52:43,670     writing manifest file '/tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/SOURCES.txt'
2021-07-15T16:52:44,186     reading manifest file '/tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/SOURCES.txt'
2021-07-15T16:52:44,188     reading manifest template 'MANIFEST.in'
2021-07-15T16:52:44,220     warning: no files found matching '.*h' under directory 'src'
2021-07-15T16:52:44,221     adding license file 'LICENSE'
2021-07-15T16:52:44,224     writing manifest file '/tmp/pip-pip-egg-info-0axb03gl/evgraf.egg-info/SOURCES.txt'
2021-07-15T16:52:44,374   Source in /tmp/pip-wheel-hgix9_xh/evgraf_87bc328e401445f386415b679fe5df90 has version 0.1.6, which satisfies requirement evgraf==0.1.6 from https://files.pythonhosted.org/packages/f2/93/c23ecf07592c0acaf91d12118429326f624b319589962c1928e7eb2a05a3/evgraf-0.1.6.tar.gz#sha256=61f2a7def93fcd8d0455e97df0bdb4a9de337e5167d3745aa92becfbf1828e43
2021-07-15T16:52:44,376   Removed evgraf==0.1.6 from https://files.pythonhosted.org/packages/f2/93/c23ecf07592c0acaf91d12118429326f624b319589962c1928e7eb2a05a3/evgraf-0.1.6.tar.gz#sha256=61f2a7def93fcd8d0455e97df0bdb4a9de337e5167d3745aa92becfbf1828e43 from build tracker '/tmp/pip-req-tracker-o5733whd'
2021-07-15T16:52:44,395 Created temporary directory: /tmp/pip-unpack-hywkxzpj
2021-07-15T16:52:44,396 Building wheels for collected packages: evgraf
2021-07-15T16:52:44,419   Created temporary directory: /tmp/pip-wheel-vupo_815
2021-07-15T16:52:44,420   Building wheel for evgraf (setup.py): started
2021-07-15T16:52:44,421   Destination directory: /tmp/pip-wheel-vupo_815
2021-07-15T16:52:44,421   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-hgix9_xh/evgraf_87bc328e401445f386415b679fe5df90/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-hgix9_xh/evgraf_87bc328e401445f386415b679fe5df90/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-vupo_815
2021-07-15T16:52:46,779   running bdist_wheel
2021-07-15T16:52:47,193   running build
2021-07-15T16:52:47,193   running build_py
2021-07-15T16:52:47,414   creating build
2021-07-15T16:52:47,416   creating build/lib.linux-armv7l-3.9
2021-07-15T16:52:47,426   creating build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,429   copying evgraf/inversion_symmetry.py -> build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,434   copying evgraf/crystal_reduction.py -> build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,438   copying evgraf/subgroup_enumeration.py -> build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,443   copying evgraf/crystal_reducer.py -> build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,447   copying evgraf/crystal_comparator.py -> build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,451   copying evgraf/__init__.py -> build/lib.linux-armv7l-3.9/evgraf
2021-07-15T16:52:47,466   creating build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,468   copying evgraf/utils/axis_permutation.py -> build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,473   copying evgraf/utils/rotation_matrix.py -> build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,477   copying evgraf/utils/standardization.py -> build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,481   copying evgraf/utils/pbc.py -> build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,485   copying evgraf/utils/minkowski_reduction.py -> build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,489   copying evgraf/utils/__init__.py -> build/lib.linux-armv7l-3.9/evgraf/utils
2021-07-15T16:52:47,495   running build_ext
2021-07-15T16:52:47,513   building 'evgrafcpp' extension
2021-07-15T16:52:47,515   creating build/temp.linux-armv7l-3.9
2021-07-15T16:52:47,517   creating build/temp.linux-armv7l-3.9/src
2021-07-15T16:52:47,519   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy -Isrc -I/usr/include/python3.9 -c src/crystalline.cpp -o build/temp.linux-armv7l-3.9/src/crystalline.o
2021-07-15T16:52:50,380   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy -Isrc -I/usr/include/python3.9 -c src/evgrafcpp_module.cpp -o build/temp.linux-armv7l-3.9/src/evgrafcpp_module.o
2021-07-15T16:52:50,824   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-15T16:52:50,825                    from src/evgrafcpp_module.cpp:2:
2021-07-15T16:52:50,825   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-15T16:52:50,826      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-15T16:52:50,826         |  ^~~~~~~
2021-07-15T16:52:51,617   src/evgrafcpp_module.cpp: In function ‘PyObject* wrap_positions(PyObject*, PyObject*, PyObject*)’:
2021-07-15T16:52:51,618   src/evgrafcpp_module.cpp:199:6: warning: unused variable ‘res’ [-Wunused-variable]
2021-07-15T16:52:51,618     199 |  int res = _wrap_positions(num_atoms, (double (*)[3])pos, (double (*)[3])cell, pbc, (double (*)[3])wrapped);
2021-07-15T16:52:51,619         |      ^~~
2021-07-15T16:52:52,164   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy -Isrc -I/usr/include/python3.9 -c src/lup_decomposition.cpp -o build/temp.linux-armv7l-3.9/src/lup_decomposition.o
2021-07-15T16:52:52,599   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy -Isrc -I/usr/include/python3.9 -c src/matrix_vector.cpp -o build/temp.linux-armv7l-3.9/src/matrix_vector.o
2021-07-15T16:52:53,625   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy -Isrc -I/usr/include/python3.9 -c src/rectangular_lsap.cpp -o build/temp.linux-armv7l-3.9/src/rectangular_lsap.o
2021-07-15T16:52:56,595   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy -Isrc -I/usr/include/python3.9 -c src/wrap_positions.cpp -o build/temp.linux-armv7l-3.9/src/wrap_positions.o
2021-07-15T16:52:57,760   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/src/crystalline.o build/temp.linux-armv7l-3.9/src/evgrafcpp_module.o build/temp.linux-armv7l-3.9/src/lup_decomposition.o build/temp.linux-armv7l-3.9/src/matrix_vector.o build/temp.linux-armv7l-3.9/src/rectangular_lsap.o build/temp.linux-armv7l-3.9/src/wrap_positions.o -o build/lib.linux-armv7l-3.9/evgrafcpp.cpython-39-arm-linux-gnueabihf.so
2021-07-15T16:52:58,210   installing to build/bdist.linux-armv7l/wheel
2021-07-15T16:52:58,211   running install
2021-07-15T16:52:58,212   running install_lib
2021-07-15T16:52:58,240   creating build/bdist.linux-armv7l
2021-07-15T16:52:58,241   creating build/bdist.linux-armv7l/wheel
2021-07-15T16:52:58,243   copying build/lib.linux-armv7l-3.9/evgrafcpp.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2021-07-15T16:52:58,268   creating build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,269   copying build/lib.linux-armv7l-3.9/evgraf/inversion_symmetry.py -> build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,274   creating build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,276   copying build/lib.linux-armv7l-3.9/evgraf/utils/axis_permutation.py -> build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,280   copying build/lib.linux-armv7l-3.9/evgraf/utils/rotation_matrix.py -> build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,284   copying build/lib.linux-armv7l-3.9/evgraf/utils/standardization.py -> build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,287   copying build/lib.linux-armv7l-3.9/evgraf/utils/pbc.py -> build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,291   copying build/lib.linux-armv7l-3.9/evgraf/utils/minkowski_reduction.py -> build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,295   copying build/lib.linux-armv7l-3.9/evgraf/utils/__init__.py -> build/bdist.linux-armv7l/wheel/evgraf/utils
2021-07-15T16:52:58,299   copying build/lib.linux-armv7l-3.9/evgraf/crystal_reduction.py -> build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,303   copying build/lib.linux-armv7l-3.9/evgraf/subgroup_enumeration.py -> build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,308   copying build/lib.linux-armv7l-3.9/evgraf/crystal_reducer.py -> build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,311   copying build/lib.linux-armv7l-3.9/evgraf/crystal_comparator.py -> build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,315   copying build/lib.linux-armv7l-3.9/evgraf/__init__.py -> build/bdist.linux-armv7l/wheel/evgraf
2021-07-15T16:52:58,318   running install_egg_info
2021-07-15T16:52:58,350   running egg_info
2021-07-15T16:52:58,352   writing evgraf.egg-info/PKG-INFO
2021-07-15T16:52:58,355   writing dependency_links to evgraf.egg-info/dependency_links.txt
2021-07-15T16:52:58,359   writing requirements to evgraf.egg-info/requires.txt
2021-07-15T16:52:58,362   writing top-level names to evgraf.egg-info/top_level.txt
2021-07-15T16:52:58,376   reading manifest file 'evgraf.egg-info/SOURCES.txt'
2021-07-15T16:52:58,380   reading manifest template 'MANIFEST.in'
2021-07-15T16:52:58,411   warning: no files found matching '.*h' under directory 'src'
2021-07-15T16:52:58,412   adding license file 'LICENSE'
2021-07-15T16:52:58,417   writing manifest file 'evgraf.egg-info/SOURCES.txt'
2021-07-15T16:52:58,419   Copying evgraf.egg-info to build/bdist.linux-armv7l/wheel/evgraf-0.1.6-py3.9.egg-info
2021-07-15T16:52:58,438   running install_scripts
2021-07-15T16:52:58,594   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-15T16:52:58,603   creating build/bdist.linux-armv7l/wheel/evgraf-0.1.6.dist-info/WHEEL
2021-07-15T16:52:58,619   creating '/tmp/pip-wheel-vupo_815/evgraf-0.1.6-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-15T16:52:58,719   adding 'evgrafcpp.cpython-39-arm-linux-gnueabihf.so'
2021-07-15T16:52:58,726   adding 'evgraf/__init__.py'
2021-07-15T16:52:58,729   adding 'evgraf/crystal_comparator.py'
2021-07-15T16:52:58,731   adding 'evgraf/crystal_reducer.py'
2021-07-15T16:52:58,734   adding 'evgraf/crystal_reduction.py'
2021-07-15T16:52:58,736   adding 'evgraf/inversion_symmetry.py'
2021-07-15T16:52:58,739   adding 'evgraf/subgroup_enumeration.py'
2021-07-15T16:52:58,742   adding 'evgraf/utils/__init__.py'
2021-07-15T16:52:58,745   adding 'evgraf/utils/axis_permutation.py'
2021-07-15T16:52:58,748   adding 'evgraf/utils/minkowski_reduction.py'
2021-07-15T16:52:58,750   adding 'evgraf/utils/pbc.py'
2021-07-15T16:52:58,753   adding 'evgraf/utils/rotation_matrix.py'
2021-07-15T16:52:58,755   adding 'evgraf/utils/standardization.py'
2021-07-15T16:52:58,768   adding 'evgraf-0.1.6.dist-info/LICENSE'
2021-07-15T16:52:58,770   adding 'evgraf-0.1.6.dist-info/METADATA'
2021-07-15T16:52:58,772   adding 'evgraf-0.1.6.dist-info/WHEEL'
2021-07-15T16:52:58,774   adding 'evgraf-0.1.6.dist-info/top_level.txt'
2021-07-15T16:52:58,776   adding 'evgraf-0.1.6.dist-info/RECORD'
2021-07-15T16:52:58,782   removing build/bdist.linux-armv7l/wheel
2021-07-15T16:52:58,968   Building wheel for evgraf (setup.py): finished with status 'done'
2021-07-15T16:52:58,974   Created wheel for evgraf: filename=evgraf-0.1.6-cp39-cp39-linux_armv7l.whl size=153073 sha256=107d4b82c7dd4dc44f6393d979b919cc6e58e2c465aeafce62d218cf45338666
2021-07-15T16:52:58,975   Stored in directory: /tmp/pip-ephem-wheel-cache-a2mcj3r2/wheels/4d/92/71/3401387bae2d81facd48c4e71642c84fc9fd081c9e424251bc
2021-07-15T16:52:58,990 Successfully built evgraf
2021-07-15T16:52:59,001 Removed build tracker: '/tmp/pip-req-tracker-o5733whd'