2021-07-15T18:23:29,033 Created temporary directory: /tmp/pip-ephem-wheel-cache-6_2x89ci 2021-07-15T18:23:29,037 Created temporary directory: /tmp/pip-req-tracker-1b8c5p95 2021-07-15T18:23:29,039 Initialized build tracking at /tmp/pip-req-tracker-1b8c5p95 2021-07-15T18:23:29,039 Created build tracker: /tmp/pip-req-tracker-1b8c5p95 2021-07-15T18:23:29,040 Entered build tracker: /tmp/pip-req-tracker-1b8c5p95 2021-07-15T18:23:29,041 Created temporary directory: /tmp/pip-wheel-dr7_uzdw 2021-07-15T18:23:29,086 1 location(s) to search for versions of helen: 2021-07-15T18:23:29,086 * https://pypi.org/simple/helen/ 2021-07-15T18:23:29,087 Fetching project page and analyzing links: https://pypi.org/simple/helen/ 2021-07-15T18:23:29,088 Getting page https://pypi.org/simple/helen/ 2021-07-15T18:23:29,092 Found index url https://pypi.org/simple 2021-07-15T18:23:29,271 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d2/e2/c44fa98afe1a33f7bc229ebad05667cb98af0a9bcfb4eeadabfa0bb88257/helen-0.0.1-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=a314cdc1822911912772418e0458ec34f8c1f57e4e55a446c1161400ee45cd78 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,271 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/52/43/3027c19654642fc4af904ad4d5ee733a7d5f8cb859584c371dc898d03fc6/helen-0.0.1-py3.6-macosx-10.9-x86_64.egg#sha256=8ab16661fa543894fe719b74f573f5657066e8629a8147efee355ea4837e13ab (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,273 Found link https://files.pythonhosted.org/packages/aa/e3/18e866278beab40d15978c4c573368247c6dfd23e4e5934a44c89b705855/helen-0.0.1.tar.gz#sha256=0e79392b40876e88034e4e66f19cd9b334d8c0cdb9d03c59178d227f775f3d55 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*), version: 0.0.1 2021-07-15T18:23:29,274 Skipping 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tags): https://files.pythonhosted.org/packages/12/a5/d49da6b7b66f9a4fe7e3236f87b7d41b74c597b3c961c1c3b76f6aade545/helen-0.0.13-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=e6b43597bc4f64008e8b9c97483c074aad2fffe326e5b410a65b4afdc5fbdcee (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,297 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f5/c5/722fb51751d641cf66a6d6c6d6edc2cc0761a1fe9401196dc5bb34fbf66e/helen-0.0.13-py3.6-macosx-10.9-x86_64.egg#sha256=0184a7d645e9dc42ba96b8a95dd4a6d5f7a28deb4863430413e02ff3267b5cdc (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,299 Found link https://files.pythonhosted.org/packages/3e/3d/6793b545265629fef9c9565080d59a17ebfedd24b330d7e007632f946d75/helen-0.0.13.tar.gz#sha256=bf6f0de2aa998d774ffeef12b26bf0880526ee44cfdee9f6cb9cca1e30f503c4 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*), version: 0.0.13 2021-07-15T18:23:29,300 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/07/da/f5c72213359382920342da9be4d0753f505e03cf7b81bd353a19ddecac68/helen-0.0.15-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=051261702167c701b7b274c5d0ff6114b012ced437e1d2153f1b6440dce41be2 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,301 Found link https://files.pythonhosted.org/packages/2b/a4/a82c7b0e09901db8bf6749b0358d09bcf215c75b6d463a16e2c6947f0f97/helen-0.0.15.tar.gz#sha256=07dafd94ed4e1fde3cb635613ebb93a5ace541a685dc58aefcee2e2e4cc37686 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*), version: 0.0.15 2021-07-15T18:23:29,302 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): 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https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,320 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/d1/14/ab48b62a6cc89b81d0559c38b17d4eebc14a16621ffbc5225640a34a4919/helen-0.0.22-py3.6-macosx-10.9-x86_64.egg#sha256=4fddfe57879a6e73a18c67b29130de87a902d1fe997b86c5b31f2921cd3bd7ba (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,321 Found link https://files.pythonhosted.org/packages/0b/ea/4bed86aee5c7599bdc4c3061906a41e1737af591ba8fda392bcff6fd360f/helen-0.0.22.tar.gz#sha256=3ebed820f052da9a8c8010fedace4b3a2c4a3c01e7ef34564d7cf7e444569844 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*), version: 0.0.22 2021-07-15T18:23:29,322 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b0/ec/33d58e92d7ec3f93ebd8bcdf5760d145ac3277269dceeeb332ed7bf7f462/helen-0.0.23-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=397eb8f175d22d89fa3a87e16aa06e75e380e92aeefb59b29c4955405b57194d (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*) 2021-07-15T18:23:29,323 Found link https://files.pythonhosted.org/packages/6b/82/7188314a6fbf3bd189fa9356440573086ad634949b8402bee7f387e8aaae/helen-0.0.23.tar.gz#sha256=e59fa207667f1d610dd6f768e8536cc0568a274dd4f7b0df841ee2e4f3e50457 (from https://pypi.org/simple/helen/) (requires-python:>=3.5.*), version: 0.0.23 2021-07-15T18:23:29,324 Skipping link: not a file: https://pypi.org/simple/helen/ 2021-07-15T18:23:29,338 Given no hashes to check 1 links for project 'helen': discarding no candidates 2021-07-15T18:23:29,384 Collecting helen==0.0.22 2021-07-15T18:23:29,387 Created temporary directory: /tmp/pip-unpack-qqdn62lq 2021-07-15T18:23:30,492 Downloading helen-0.0.22.tar.gz (1.9 MB) 2021-07-15T18:23:31,484 Added helen==0.0.22 from https://files.pythonhosted.org/packages/0b/ea/4bed86aee5c7599bdc4c3061906a41e1737af591ba8fda392bcff6fd360f/helen-0.0.22.tar.gz#sha256=3ebed820f052da9a8c8010fedace4b3a2c4a3c01e7ef34564d7cf7e444569844 to build tracker '/tmp/pip-req-tracker-1b8c5p95' 2021-07-15T18:23:31,486 Running setup.py (path:/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py) egg_info for package helen 2021-07-15T18:23:31,488 Created temporary directory: /tmp/pip-pip-egg-info-ptrnvhoa 2021-07-15T18:23:31,488 Running command python setup.py egg_info 2021-07-15T18:23:33,980 running egg_info 2021-07-15T18:23:33,989 creating /tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info 2021-07-15T18:23:33,991 writing /tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/PKG-INFO 2021-07-15T18:23:33,996 writing dependency_links to /tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/dependency_links.txt 2021-07-15T18:23:33,999 writing entry points to /tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/entry_points.txt 2021-07-15T18:23:34,010 writing requirements to /tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/requires.txt 2021-07-15T18:23:34,011 writing top-level names to /tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/top_level.txt 2021-07-15T18:23:34,014 writing manifest file '/tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/SOURCES.txt' 2021-07-15T18:23:34,465 reading manifest file '/tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/SOURCES.txt' 2021-07-15T18:23:34,469 reading manifest template 'MANIFEST.in' 2021-07-15T18:23:34,472 warning: no files found matching 'build.sh' 2021-07-15T18:23:34,581 warning: no files found matching '*' under directory 'docker/' 2021-07-15T18:23:34,592 adding license file 'LICENSE' 2021-07-15T18:23:34,598 writing manifest file '/tmp/pip-pip-egg-info-ptrnvhoa/helen.egg-info/SOURCES.txt' 2021-07-15T18:23:34,840 Source in /tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec has version 0.0.22, which satisfies requirement helen==0.0.22 from https://files.pythonhosted.org/packages/0b/ea/4bed86aee5c7599bdc4c3061906a41e1737af591ba8fda392bcff6fd360f/helen-0.0.22.tar.gz#sha256=3ebed820f052da9a8c8010fedace4b3a2c4a3c01e7ef34564d7cf7e444569844 2021-07-15T18:23:34,842 Removed helen==0.0.22 from https://files.pythonhosted.org/packages/0b/ea/4bed86aee5c7599bdc4c3061906a41e1737af591ba8fda392bcff6fd360f/helen-0.0.22.tar.gz#sha256=3ebed820f052da9a8c8010fedace4b3a2c4a3c01e7ef34564d7cf7e444569844 from build tracker '/tmp/pip-req-tracker-1b8c5p95' 2021-07-15T18:23:34,861 Created temporary directory: /tmp/pip-unpack-eugf4ghw 2021-07-15T18:23:34,863 Building wheels for collected packages: helen 2021-07-15T18:23:34,874 Created temporary directory: /tmp/pip-wheel-gp2ldq_j 2021-07-15T18:23:34,875 Building wheel for helen (setup.py): started 2021-07-15T18:23:34,875 Destination directory: /tmp/pip-wheel-gp2ldq_j 2021-07-15T18:23:34,876 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-gp2ldq_j 2021-07-15T18:23:39,182 running bdist_wheel 2021-07-15T18:23:39,204 running build 2021-07-15T18:23:39,206 running build_py 2021-07-15T18:23:39,661 creating build 2021-07-15T18:23:39,662 creating build/lib.linux-armv7l-3.9 2021-07-15T18:23:39,665 creating build/lib.linux-armv7l-3.9/helen 2021-07-15T18:23:39,669 copying helen/marginpolish.py -> build/lib.linux-armv7l-3.9/helen 2021-07-15T18:23:39,674 copying helen/version.py -> build/lib.linux-armv7l-3.9/helen 2021-07-15T18:23:39,679 copying helen/helen.py -> build/lib.linux-armv7l-3.9/helen 2021-07-15T18:23:39,684 copying helen/__init__.py -> build/lib.linux-armv7l-3.9/helen 2021-07-15T18:23:39,689 copying helen/helen_train.py -> build/lib.linux-armv7l-3.9/helen 2021-07-15T18:23:39,695 creating build/lib.linux-armv7l-3.9/helen/modules 2021-07-15T18:23:39,697 creating build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,701 copying helen/modules/python/TestInterface.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,707 copying helen/modules/python/TextColor.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,711 copying helen/modules/python/DataStore.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,717 copying helen/modules/python/__init__.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,721 copying helen/modules/python/TrainInterface.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,727 copying helen/modules/python/FileManager.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,733 copying helen/modules/python/PairwiseAlignment.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,738 copying helen/modules/python/Options.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,743 copying helen/modules/python/StitchInterface.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,749 copying helen/modules/python/Stitch.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,753 copying helen/modules/python/hyperbandInterface.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,759 copying helen/modules/python/CallConsensusInterface.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,765 copying helen/modules/python/DownloadModel.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,770 copying helen/modules/python/PolishInterface.py -> build/lib.linux-armv7l-3.9/helen/modules/python 2021-07-15T18:23:39,776 creating build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,778 copying helen/modules/python/models/ModelHander.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,784 copying helen/modules/python/models/dataloader_debug.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,789 copying helen/modules/python/models/hyperband.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,793 copying helen/modules/python/models/__init__.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,798 copying helen/modules/python/models/train_distributed.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,803 copying helen/modules/python/models/train.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,809 copying helen/modules/python/models/TransducerModel.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,814 copying helen/modules/python/models/predict_gpu.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,824 copying helen/modules/python/models/predict.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,829 copying helen/modules/python/models/dataloader.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,832 copying helen/modules/python/models/predict_cpu.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,837 copying helen/modules/python/models/test.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,841 copying helen/modules/python/models/test_debug.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,851 copying helen/modules/python/models/dataloader_predict.py -> build/lib.linux-armv7l-3.9/helen/modules/python/models 2021-07-15T18:23:39,856 creating build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,858 copying helen/modules/python/helper/test_pairwisealigner.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,863 copying helen/modules/python/helper/assess_summary_analyzer.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,867 copying helen/modules/python/helper/quast_sv_extractor.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,873 copying helen/modules/python/helper/csv_analyzer.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,878 copying helen/modules/python/helper/__init__.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,882 copying helen/modules/python/helper/hdf5_reader.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,890 copying helen/modules/python/helper/VCF_remove_phase.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,894 copying helen/modules/python/helper/tensor_analyzer.py -> build/lib.linux-armv7l-3.9/helen/modules/python/helper 2021-07-15T18:23:39,910 running build_ext 2021-07-15T18:23:40,007 CMAKE VERSION: 3.18.4 2021-07-15T18:23:40,009 ---------- Running CMake prepare ---------------------------------------- 2021-07-15T18:23:40,633 -- The C compiler identification is GNU 10.2.1 2021-07-15T18:23:41,128 -- The CXX compiler identification is GNU 10.2.1 2021-07-15T18:23:41,201 -- Detecting C compiler ABI info 2021-07-15T18:23:41,904 -- Detecting C compiler ABI info - done 2021-07-15T18:23:41,997 -- Check for working C compiler: /usr/bin/cc - skipped 2021-07-15T18:23:41,999 -- Detecting C compile features 2021-07-15T18:23:42,003 -- Detecting C compile features - done 2021-07-15T18:23:42,041 -- Detecting CXX compiler ABI info 2021-07-15T18:23:42,689 -- Detecting CXX compiler ABI info - done 2021-07-15T18:23:42,785 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2021-07-15T18:23:42,787 -- Detecting CXX compile features 2021-07-15T18:23:42,792 -- Detecting CXX compile features - done 2021-07-15T18:23:43,205 -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.9.2", minimum required is "3") 2021-07-15T18:23:43,249 -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.9.so (found suitable version "3.9.2", minimum required is "3") 2021-07-15T18:23:43,249 Python found 2021-07-15T18:23:44,438 -- Found PythonInterp: /usr/bin/python3 (found version "3.9.2") 2021-07-15T18:23:44,663 -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.9.so 2021-07-15T18:23:44,723 -- pybind11 v2.2.4 2021-07-15T18:23:44,991 -- Performing Test HAS_FLTO 2021-07-15T18:23:46,315 -- Performing Test HAS_FLTO - Success 2021-07-15T18:23:46,317 -- LTO enabled 2021-07-15T18:23:46,330 -- Configuring done 2021-07-15T18:23:46,419 -- Generating done 2021-07-15T18:23:46,438 -- Build files have been written to: /tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/build/temp.linux-armv7l-3.9 2021-07-15T18:23:46,474 ---------- Building extensions ---------------------------------------- 2021-07-15T18:23:47,119 Scanning dependencies of target marginpolish 2021-07-15T18:23:47,261 Scanning dependencies of target HELEN 2021-07-15T18:23:47,281 [ 10%] Creating directories for 'marginpolish' 2021-07-15T18:23:47,409 [ 20%] Building CXX object CMakeFiles/HELEN.dir/helen/modules/src/pybind_api.cpp.o 2021-07-15T18:23:47,561 In file included from /tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/helen/modules/src/pybind_api.cpp:5: 2021-07-15T18:23:47,561 /tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/helen/modules/src/local_reassembly/ssw.c:39:10: fatal error: emmintrin.h: No such file or directory 2021-07-15T18:23:47,562 39 | #include 2021-07-15T18:23:47,562 | ^~~~~~~~~~~~~ 2021-07-15T18:23:47,562 compilation terminated. 2021-07-15T18:23:47,580 gmake[2]: *** [CMakeFiles/HELEN.dir/build.make:82: CMakeFiles/HELEN.dir/helen/modules/src/pybind_api.cpp.o] Error 1 2021-07-15T18:23:47,581 gmake[1]: *** [CMakeFiles/Makefile2:117: CMakeFiles/HELEN.dir/all] Error 2 2021-07-15T18:23:47,581 gmake[1]: *** Waiting for unfinished jobs.... 2021-07-15T18:23:48,157 [ 30%] Performing download step (git clone) for 'marginpolish' 2021-07-15T18:23:48,462 Cloning into 'marginpolish'... 2021-07-15T18:23:48,536 fatal: transport 'https' not allowed 2021-07-15T18:23:48,593 Cloning into 'marginpolish'... 2021-07-15T18:23:48,678 fatal: transport 'https' not allowed 2021-07-15T18:23:48,730 Cloning into 'marginpolish'... 2021-07-15T18:23:48,791 fatal: transport 'https' not allowed 2021-07-15T18:23:48,815 -- Had to git clone more than once: 2021-07-15T18:23:48,816 3 times. 2021-07-15T18:23:48,816 CMake Error at /tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/build/temp.linux-armv7l-3.9/marginpolish/tmp/marginpolish-gitclone.cmake:31 (message): 2021-07-15T18:23:48,816 Failed to clone repository: 2021-07-15T18:23:48,817 'https://github.com/UCSC-nanopore-cgl/MarginPolish.git' 2021-07-15T18:23:48,823 gmake[2]: *** [CMakeFiles/marginpolish.dir/build.make:110: marginpolish/src/marginpolish-stamp/marginpolish-download] Error 1 2021-07-15T18:23:48,823 gmake[1]: *** [CMakeFiles/Makefile2:144: CMakeFiles/marginpolish.dir/all] Error 2 2021-07-15T18:23:48,824 gmake: *** [Makefile:103: all] Error 2 2021-07-15T18:23:48,830 Traceback (most recent call last): 2021-07-15T18:23:48,830 File "", line 1, in 2021-07-15T18:23:48,830 File "/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py", line 136, in 2021-07-15T18:23:48,831 setup( 2021-07-15T18:23:48,832 File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup 2021-07-15T18:23:48,832 return distutils.core.setup(**attrs) 2021-07-15T18:23:48,832 File "/usr/lib/python3.9/distutils/core.py", line 148, in setup 2021-07-15T18:23:48,833 dist.run_commands() 2021-07-15T18:23:48,833 File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands 2021-07-15T18:23:48,834 self.run_command(cmd) 2021-07-15T18:23:48,835 File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command 2021-07-15T18:23:48,836 cmd_obj.run() 2021-07-15T18:23:48,836 File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run 2021-07-15T18:23:48,837 self.run_command('build') 2021-07-15T18:23:48,837 File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command 2021-07-15T18:23:48,838 self.distribution.run_command(command) 2021-07-15T18:23:48,838 File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command 2021-07-15T18:23:48,839 cmd_obj.run() 2021-07-15T18:23:48,840 File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run 2021-07-15T18:23:48,840 self.run_command(cmd_name) 2021-07-15T18:23:48,840 File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command 2021-07-15T18:23:48,848 self.distribution.run_command(command) 2021-07-15T18:23:48,849 File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command 2021-07-15T18:23:48,849 cmd_obj.run() 2021-07-15T18:23:48,849 File "/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py", line 66, in run 2021-07-15T18:23:48,850 subprocess.check_call(cmake_cmd, 2021-07-15T18:23:48,850 File "/usr/lib/python3.9/subprocess.py", line 373, in check_call 2021-07-15T18:23:48,850 raise CalledProcessError(retcode, cmd) 2021-07-15T18:23:48,851 subprocess.CalledProcessError: Command '['cmake', '--build', '.', '--config', 'Release', '--', '-j2']' returned non-zero exit status 2. 2021-07-15T18:23:49,099 Building wheel for helen (setup.py): finished with status 'error' 2021-07-15T18:23:49,100 ERROR: Failed building wheel for helen 2021-07-15T18:23:49,101 Running setup.py clean for helen 2021-07-15T18:23:49,101 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-dr7_uzdw/helen_d1b12fe3778b428baa5f6bbc521373ec/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-15T18:23:53,188 running clean 2021-07-15T18:23:53,194 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-15T18:23:53,423 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-15T18:23:53,461 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-15T18:23:53,462 'build/scripts-3.9' does not exist -- can't clean it 2021-07-15T18:23:53,462 removing 'build' 2021-07-15T18:23:53,666 Failed to build helen 2021-07-15T18:23:53,667 ERROR: Failed to build one or more wheels 2021-07-15T18:23:53,668 Exception information: 2021-07-15T18:23:53,668 Traceback (most recent call last): 2021-07-15T18:23:53,668 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-15T18:23:53,668 status = self.run(options, args) 2021-07-15T18:23:53,668 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-15T18:23:53,668 return func(self, options, args) 2021-07-15T18:23:53,668 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-15T18:23:53,668 raise CommandError( 2021-07-15T18:23:53,668 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-15T18:23:53,679 Removed build tracker: '/tmp/pip-req-tracker-1b8c5p95'