2021-07-15T19:37:59,794 Created temporary directory: /tmp/pip-ephem-wheel-cache-1300jk49 2021-07-15T19:37:59,797 Created temporary directory: /tmp/pip-req-tracker-2mej9mzt 2021-07-15T19:37:59,797 Initialized build tracking at /tmp/pip-req-tracker-2mej9mzt 2021-07-15T19:37:59,797 Created build tracker: /tmp/pip-req-tracker-2mej9mzt 2021-07-15T19:37:59,797 Entered build tracker: /tmp/pip-req-tracker-2mej9mzt 2021-07-15T19:37:59,798 Created temporary directory: /tmp/pip-wheel-3dwqojt0 2021-07-15T19:37:59,828 1 location(s) to search for versions of scikit-bio: 2021-07-15T19:37:59,828 * https://pypi.org/simple/scikit-bio/ 2021-07-15T19:37:59,828 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2021-07-15T19:37:59,829 Getting page https://pypi.org/simple/scikit-bio/ 2021-07-15T19:37:59,830 Found index url https://pypi.org/simple 2021-07-15T19:38:00,018 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz#sha256=e68193db29015e8f861b7d548f432384aa1741575028ce9a138b39ebee66e1ed (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2021-07-15T19:38:00,019 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz#sha256=f758a5136a211cba16c8e6f1ed250f0fadb27fab436c5b7a73902dbb114618df (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2021-07-15T19:38:00,019 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz#sha256=bdd9cb68dcc5e3ffc00fa5ae21e9e0f92f1f9c2e5a24a671596bb39d0d3e02a7 (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2021-07-15T19:38:00,020 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz#sha256=11af62a5d8302da204c004b16bc625cc055e7322633b289353929ccc4b872e74 (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2021-07-15T19:38:00,020 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz#sha256=466d50ced117dafe24f734eb6afd2ec0465caebe5d3e775402582ac77eecc2a8 (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2021-07-15T19:38:00,020 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz#sha256=f136639c66f48d1e83b9799e044c49f0febefa4ead4b4fb7c88ec503147bdb03 (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2021-07-15T19:38:00,021 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz#sha256=348687b973be55505ec7e90c40a21921533d3b5021599705922b8c730cb8c872 (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2021-07-15T19:38:00,021 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz#sha256=adc7a3aa93ca7a3f642531e2cf64778ae243087fd6279d5354fdf157943f41cb (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2021-07-15T19:38:00,021 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz#sha256=6c5fb4b6baec0abde209d33e86e95ff4a776f653a6c3916aa95831eafe03472a (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2021-07-15T19:38:00,021 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz#sha256=5feec63b49249360d2bb55d0163d7066f530d163b5474a3319ec197e7e74c683 (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2021-07-15T19:38:00,022 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz#sha256=90a3f1ffd9401d8a8f8c1ba8fdd1ea63577fb2063209440d27e8e0834322a1e3 (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2021-07-15T19:38:00,022 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz#sha256=66e755b6c7d5b861c7eb63aeb46f4d9afe74ee0ac93c1215e0aa57003e573b0b (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2021-07-15T19:38:00,022 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz#sha256=fe33a6cd7e6eb3fd8c088491422e499cfb36fab63c38659b587230f3dd63d91a (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2021-07-15T19:38:00,023 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip#sha256=482194dd827b86fdf340d1576b07d70f8c62158d471d733fa3e73fe316afaa3a (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2021-07-15T19:38:00,023 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz#sha256=2d606f0bbd50df3e5814c10260d0e1a35484ecf141e5e5c809d9c9dbf87a3655 (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2021-07-15T19:38:00,023 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz#sha256=566c83249d2d338104d106c3a8ba36fa1afeabf10ead8e95b84605b71c65b743 (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2021-07-15T19:38:00,023 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz#sha256=fbeebe39b0026601fa0f641fdad45abc7c2810fa75d43142f3c5473aff07ff59 (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2021-07-15T19:38:00,024 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz#sha256=3243f1995ef24643c09ff4d9391a79528aadd8232e5aa5d66c38d7b2e0c92f24 (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2021-07-15T19:38:00,024 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz#sha256=9fa813be66e88a994f7b7a68b8ba2216e205c525caa8585386ebdeebed6428df (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2021-07-15T19:38:00,024 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2021-07-15T19:38:00,025 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2021-07-15T19:38:00,045 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2021-07-15T19:38:00,067 Collecting scikit-bio==0.5.6 2021-07-15T19:38:00,069 Created temporary directory: /tmp/pip-unpack-q6u1mp_g 2021-07-15T19:38:00,108 Downloading scikit-bio-0.5.6.tar.gz (8.4 MB) 2021-07-15T19:38:02,906 Added scikit-bio==0.5.6 from https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea to build tracker '/tmp/pip-req-tracker-2mej9mzt' 2021-07-15T19:38:02,907 Running setup.py (path:/tmp/pip-wheel-3dwqojt0/scikit-bio_8184639cb67b4de693a23d2bbac21a3b/setup.py) egg_info for package scikit-bio 2021-07-15T19:38:02,908 Created temporary directory: /tmp/pip-pip-egg-info-bv_bk_2a 2021-07-15T19:38:02,908 Running command python setup.py egg_info 2021-07-15T19:38:04,334 running egg_info 2021-07-15T19:38:04,337 creating /tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info 2021-07-15T19:38:04,339 writing /tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/PKG-INFO 2021-07-15T19:38:04,342 writing dependency_links to /tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/dependency_links.txt 2021-07-15T19:38:04,344 writing requirements to /tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/requires.txt 2021-07-15T19:38:04,345 writing top-level names to /tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/top_level.txt 2021-07-15T19:38:04,347 writing manifest file '/tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/SOURCES.txt' 2021-07-15T19:38:04,794 reading manifest file '/tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/SOURCES.txt' 2021-07-15T19:38:04,796 reading manifest template 'MANIFEST.in' 2021-07-15T19:38:04,847 no previously-included directories found matching 'doc/build' 2021-07-15T19:38:04,849 no previously-included directories found matching 'doc/source/generated' 2021-07-15T19:38:04,853 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-07-15T19:38:04,856 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2021-07-15T19:38:04,859 warning: no previously-included files matching '*.so' found anywhere in distribution 2021-07-15T19:38:04,863 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2021-07-15T19:38:04,866 warning: no previously-included files matching '.coverage' found anywhere in distribution 2021-07-15T19:38:04,866 adding license file 'COPYING.txt' 2021-07-15T19:38:04,902 writing manifest file '/tmp/pip-pip-egg-info-bv_bk_2a/scikit_bio.egg-info/SOURCES.txt' 2021-07-15T19:38:05,006 Source in /tmp/pip-wheel-3dwqojt0/scikit-bio_8184639cb67b4de693a23d2bbac21a3b has version 0.5.6, which satisfies requirement scikit-bio==0.5.6 from https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea 2021-07-15T19:38:05,007 Removed scikit-bio==0.5.6 from https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz#sha256=48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea from build tracker '/tmp/pip-req-tracker-2mej9mzt' 2021-07-15T19:38:05,012 Created temporary directory: /tmp/pip-unpack-wcnvvd0h 2021-07-15T19:38:05,013 Building wheels for collected packages: scikit-bio 2021-07-15T19:38:05,016 Created temporary directory: /tmp/pip-wheel-3n6epkpj 2021-07-15T19:38:05,017 Building wheel for scikit-bio (setup.py): started 2021-07-15T19:38:05,017 Destination directory: /tmp/pip-wheel-3n6epkpj 2021-07-15T19:38:05,017 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-3dwqojt0/scikit-bio_8184639cb67b4de693a23d2bbac21a3b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-3dwqojt0/scikit-bio_8184639cb67b4de693a23d2bbac21a3b/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3n6epkpj 2021-07-15T19:38:06,420 running bdist_wheel 2021-07-15T19:38:06,627 running build 2021-07-15T19:38:06,627 running build_py 2021-07-15T19:38:06,762 creating build 2021-07-15T19:38:06,763 creating build/lib.linux-armv7l-3.9 2021-07-15T19:38:06,764 creating build/lib.linux-armv7l-3.9/benchmarks 2021-07-15T19:38:06,765 copying benchmarks/__init__.py -> build/lib.linux-armv7l-3.9/benchmarks 2021-07-15T19:38:06,766 copying benchmarks/benchmarks.py -> build/lib.linux-armv7l-3.9/benchmarks 2021-07-15T19:38:06,768 creating build/lib.linux-armv7l-3.9/skbio 2021-07-15T19:38:06,769 copying skbio/test.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-15T19:38:06,771 copying skbio/__init__.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-15T19:38:06,772 copying skbio/_base.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-15T19:38:06,774 copying skbio/workflow.py -> build/lib.linux-armv7l-3.9/skbio 2021-07-15T19:38:06,777 creating build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:06,778 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:06,780 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:06,782 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:06,785 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:06,791 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:06,794 creating build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:06,795 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:06,798 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:06,801 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:06,802 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:06,806 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:06,810 creating build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-15T19:38:06,811 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-15T19:38:06,814 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-15T19:38:06,817 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-15T19:38:06,819 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity 2021-07-15T19:38:06,823 creating build/lib.linux-armv7l-3.9/skbio/tree 2021-07-15T19:38:06,823 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-15T19:38:06,826 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-15T19:38:06,827 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-15T19:38:06,830 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-15T19:38:06,836 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree 2021-07-15T19:38:06,839 creating build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,840 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,842 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,845 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,847 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,850 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,852 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,855 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,857 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,862 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,864 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence 2021-07-15T19:38:06,868 creating build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,869 copying skbio/stats/power.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,873 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,875 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,877 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,880 copying skbio/stats/composition.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,884 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:06,887 creating build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,887 copying skbio/io/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,890 copying skbio/io/_exception.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,892 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,894 copying skbio/io/_warning.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,896 copying skbio/io/registry.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,899 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,902 copying skbio/io/util.py -> build/lib.linux-armv7l-3.9/skbio/io 2021-07-15T19:38:06,905 creating build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,906 copying skbio/util/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,908 copying skbio/util/_exception.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,909 copying skbio/util/_warning.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,911 copying skbio/util/_testing.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,914 copying skbio/util/_misc.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,916 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util 2021-07-15T19:38:06,919 creating build/lib.linux-armv7l-3.9/skbio/tests 2021-07-15T19:38:06,920 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-15T19:38:06,922 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-15T19:38:06,924 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-3.9/skbio/tests 2021-07-15T19:38:06,927 creating build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-15T19:38:06,928 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-15T19:38:06,931 creating build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-15T19:38:06,931 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-15T19:38:06,933 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-15T19:38:06,937 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-15T19:38:06,945 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-3.9/skbio/alignment/tests 2021-07-15T19:38:06,949 creating build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-15T19:38:06,950 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-15T19:38:06,952 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-15T19:38:06,954 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-15T19:38:06,957 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-3.9/skbio/metadata/tests 2021-07-15T19:38:06,961 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,962 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,965 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,967 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,969 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,972 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,974 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,977 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha 2021-07-15T19:38:06,979 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-15T19:38:06,980 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-15T19:38:06,983 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta 2021-07-15T19:38:06,986 creating build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-15T19:38:06,987 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-15T19:38:06,989 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-15T19:38:06,992 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-15T19:38:06,995 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-3.9/skbio/diversity/tests 2021-07-15T19:38:07,000 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,001 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,004 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,006 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,008 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,010 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,012 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,014 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests 2021-07-15T19:38:07,017 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-15T19:38:07,018 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-15T19:38:07,020 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests 2021-07-15T19:38:07,024 creating build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-15T19:38:07,024 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-15T19:38:07,026 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-15T19:38:07,029 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-15T19:38:07,033 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-3.9/skbio/tree/tests 2021-07-15T19:38:07,036 creating build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,037 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,042 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,044 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,046 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,048 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,051 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,054 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,057 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,059 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-3.9/skbio/sequence/tests 2021-07-15T19:38:07,062 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,063 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,066 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,069 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,072 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,074 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,077 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,080 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination 2021-07-15T19:38:07,084 creating build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,085 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,087 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,090 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,094 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,095 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,098 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-3.9/skbio/stats/tests 2021-07-15T19:38:07,103 creating build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,103 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,106 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,109 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,111 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,113 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,117 copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,120 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance 2021-07-15T19:38:07,123 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-15T19:38:07,124 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-15T19:38:07,127 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve 2021-07-15T19:38:07,129 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,130 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,133 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,135 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,137 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,139 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,142 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,144 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests 2021-07-15T19:38:07,148 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,149 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,151 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,154 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,158 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,160 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,163 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,165 copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests 2021-07-15T19:38:07,168 creating build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-15T19:38:07,169 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-15T19:38:07,171 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-3.9/skbio/stats/evolve/tests 2021-07-15T19:38:07,176 creating build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,176 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,179 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,182 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,184 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,186 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,189 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,192 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,195 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,198 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,201 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,204 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,206 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,209 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,211 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,215 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,217 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,219 copying skbio/io/format/embl.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,223 copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,226 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format 2021-07-15T19:38:07,229 creating build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-15T19:38:07,230 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-15T19:38:07,233 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-15T19:38:07,234 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-15T19:38:07,238 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-3.9/skbio/io/tests 2021-07-15T19:38:07,243 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,244 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,248 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,251 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,253 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,256 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,258 copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,262 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,265 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,268 copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,270 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,273 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,276 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,278 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,281 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,282 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,285 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,287 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,289 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-3.9/skbio/io/format/tests 2021-07-15T19:38:07,293 creating build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-15T19:38:07,293 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-15T19:38:07,296 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-15T19:38:07,298 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-15T19:38:07,301 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-3.9/skbio/util/tests 2021-07-15T19:38:07,353 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data 2021-07-15T19:38:07,353 creating build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-15T19:38:07,354 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-15T19:38:07,356 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-15T19:38:07,358 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-15T19:38:07,360 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/alpha/tests/data/qiime-191-tt 2021-07-15T19:38:07,362 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data 2021-07-15T19:38:07,362 creating build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,363 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,366 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,367 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,369 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,372 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,374 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-3.9/skbio/diversity/beta/tests/data/qiime-191-tt 2021-07-15T19:38:07,376 creating build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,377 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,379 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,381 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,383 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,386 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,388 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,390 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,393 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,395 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,397 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,399 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,401 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-3.9/skbio/stats/tests/data 2021-07-15T19:38:07,404 creating build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,404 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,407 copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,409 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,412 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,414 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,417 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,419 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,421 copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,423 copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,425 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,427 copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,430 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,432 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,435 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,437 copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,439 copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,442 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,444 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,446 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,449 copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,451 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,453 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,456 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,458 copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,460 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,463 copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,465 copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,467 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,470 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,472 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,474 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,477 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,479 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,481 copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,484 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,486 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,488 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,491 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,493 copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,496 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-3.9/skbio/stats/ordination/tests/data 2021-07-15T19:38:07,498 creating build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,499 copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,502 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,505 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,507 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,509 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,512 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,515 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,517 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,520 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,523 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,526 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,528 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,531 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,533 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,536 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,538 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,540 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,543 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,546 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,548 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,551 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,553 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,555 copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,558 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-3.9/skbio/stats/distance/tests/data 2021-07-15T19:38:07,560 creating build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,561 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,564 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,566 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,569 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,571 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,574 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,576 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,578 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-3.9/skbio/io/tests/data 2021-07-15T19:38:07,581 creating build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,582 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,584 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,587 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,589 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,592 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,595 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,597 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,600 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,602 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,604 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,607 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,609 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,612 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,614 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,617 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,619 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,622 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,624 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,626 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,629 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,631 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,634 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,636 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,638 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,641 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,643 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,646 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,648 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,651 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,653 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,656 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,658 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,661 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,663 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,666 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,668 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,671 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,673 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,676 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,678 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,680 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,683 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,685 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,688 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,691 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,693 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,696 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,698 copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,701 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,703 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,706 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,708 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,710 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,713 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,715 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,718 copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,720 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,723 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,725 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,728 copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,730 copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,735 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,738 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,740 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,743 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,745 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,748 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,750 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,752 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,755 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,757 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,760 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,763 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,765 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,767 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,770 copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,773 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,775 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,777 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,780 copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,783 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,785 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,788 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,790 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,792 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,795 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,797 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,800 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,803 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,806 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,808 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,811 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,813 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,816 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,818 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,821 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,823 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,825 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,828 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,830 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,833 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,835 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,838 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,840 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,843 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,845 copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,847 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,850 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,852 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,855 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,857 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,859 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,862 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,864 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,867 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,869 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,872 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,874 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,877 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,879 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,882 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,884 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,887 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,889 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,891 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,894 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,896 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,899 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,901 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,904 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,907 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,909 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,911 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,914 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,916 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,919 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,921 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,924 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,926 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,929 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,931 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,934 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,936 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,939 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,941 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,943 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,946 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,948 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,951 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,953 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,956 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,959 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,961 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,964 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,966 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,969 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,972 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,974 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,977 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,979 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,982 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,984 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,986 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,989 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,991 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,994 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,996 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:07,999 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,001 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,004 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,006 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,008 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,011 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,014 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,016 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,019 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,021 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,024 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,026 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,028 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,031 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,033 copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,036 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,038 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,041 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,043 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,046 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,048 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,051 copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,053 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,056 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,058 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,061 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,063 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,066 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,069 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,072 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,074 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,076 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,079 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,082 copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,084 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,087 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,089 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,092 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,094 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,097 copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,099 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,102 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,105 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,107 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,110 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,112 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,115 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,117 copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,120 copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,122 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,125 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,127 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,129 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,132 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,134 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,137 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,139 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,142 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,144 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,147 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,149 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,152 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,154 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,157 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,159 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,162 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,164 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,166 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,169 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,171 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,174 copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,177 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,179 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,182 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,185 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,187 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,189 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,192 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,195 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,198 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,201 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,203 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,206 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,208 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,211 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,213 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,216 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,218 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,221 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,224 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,226 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,228 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,231 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,233 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,236 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,238 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,241 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,243 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,246 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,248 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,251 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,253 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,256 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,258 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,261 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,263 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,266 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,268 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,271 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,273 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,276 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,278 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,281 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,283 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,286 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,288 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,290 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,293 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,295 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,298 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,300 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,303 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,305 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,307 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,310 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,313 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,315 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,318 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,320 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,323 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,325 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,328 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,330 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,332 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,335 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,337 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,340 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,342 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,345 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,347 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,349 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,352 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,354 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,357 copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,360 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,363 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,365 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,367 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,370 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,372 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,375 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,377 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,380 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,383 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,385 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,388 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,390 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,393 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,395 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,397 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,400 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,403 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,405 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,407 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,410 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,412 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-3.9/skbio/io/format/tests/data 2021-07-15T19:38:08,441 running build_ext 2021-07-15T19:38:08,447 building 'skbio.metadata._intersection' extension 2021-07-15T19:38:08,448 creating build/temp.linux-armv7l-3.9 2021-07-15T19:38:08,448 creating build/temp.linux-armv7l-3.9/skbio 2021-07-15T19:38:08,449 creating build/temp.linux-armv7l-3.9/skbio/metadata 2021-07-15T19:38:08,449 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-3.9/skbio/metadata/_intersection.o 2021-07-15T19:38:09,041 skbio/metadata/_intersection.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T19:38:09,047 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,047 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,047 | ^ 2021-07-15T19:38:09,047 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,047 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,047 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,048 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,048 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,048 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,054 skbio/metadata/_intersection.c:11013:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,054 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,054 | ^ 2021-07-15T19:38:09,054 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,054 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,055 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,055 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:09,055 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:09,055 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,060 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,061 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,061 | ^ 2021-07-15T19:38:09,061 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,061 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,061 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,061 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,061 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,062 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,067 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,067 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,067 | ^ 2021-07-15T19:38:09,068 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,068 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,068 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,068 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,068 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,068 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,074 skbio/metadata/_intersection.c:11013:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,074 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,074 | ^ 2021-07-15T19:38:09,074 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,074 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,074 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,075 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:09,075 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:09,075 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,080 skbio/metadata/_intersection.c:11013:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,081 11013 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,081 | ^ 2021-07-15T19:38:09,081 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,081 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,081 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,081 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,081 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,081 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,089 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,089 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,089 | ^ 2021-07-15T19:38:09,089 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,089 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,089 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,090 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,090 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,090 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,095 skbio/metadata/_intersection.c:11029:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,096 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,096 | ^ 2021-07-15T19:38:09,096 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,096 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,096 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,096 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:09,096 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:09,096 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,102 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,102 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,102 | ^ 2021-07-15T19:38:09,103 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,103 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,103 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,103 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,103 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,103 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,109 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,109 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,109 | ^ 2021-07-15T19:38:09,109 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,109 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,109 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,110 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,110 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,110 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,115 skbio/metadata/_intersection.c:11029:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,116 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,116 | ^ 2021-07-15T19:38:09,116 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,116 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,116 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,116 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:09,116 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:09,116 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:09,122 skbio/metadata/_intersection.c:11029:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:09,122 11029 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:09,122 | ^ 2021-07-15T19:38:09,122 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:09,123 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:09,123 from skbio/metadata/_intersection.c:17: 2021-07-15T19:38:09,123 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:09,123 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:09,123 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,334 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/skbio/metadata/_intersection.o -o build/lib.linux-armv7l-3.9/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so 2021-07-15T19:38:18,480 building 'skbio.stats.__subsample' extension 2021-07-15T19:38:18,481 creating build/temp.linux-armv7l-3.9/skbio/stats 2021-07-15T19:38:18,481 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/__subsample.c -o build/temp.linux-armv7l-3.9/skbio/stats/__subsample.o 2021-07-15T19:38:18,854 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T19:38:18,854 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T19:38:18,855 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T19:38:18,855 from skbio/stats/__subsample.c:617: 2021-07-15T19:38:18,855 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T19:38:18,855 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T19:38:18,855 | ^~~~~~~ 2021-07-15T19:38:18,970 skbio/stats/__subsample.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T19:38:18,973 skbio/stats/__subsample.c:5377:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,973 5377 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,973 | ^ 2021-07-15T19:38:18,974 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,974 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,974 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,974 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:18,974 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:18,974 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,977 skbio/stats/__subsample.c:5377:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,977 5377 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,977 | ^ 2021-07-15T19:38:18,977 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,977 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,977 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,978 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:18,978 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:18,978 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,980 skbio/stats/__subsample.c:5377:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,980 5377 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,980 | ^ 2021-07-15T19:38:18,980 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,981 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,981 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,981 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:18,981 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:18,981 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,983 skbio/stats/__subsample.c:5377:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,983 5377 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,983 | ^ 2021-07-15T19:38:18,984 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,984 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,984 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,984 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:18,984 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:18,984 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,986 skbio/stats/__subsample.c:5377:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,986 5377 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,987 | ^ 2021-07-15T19:38:18,987 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,987 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,987 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,987 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:18,987 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:18,987 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,989 skbio/stats/__subsample.c:5377:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,990 5377 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,990 | ^ 2021-07-15T19:38:18,990 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,990 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,990 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,990 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:18,990 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:18,991 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,994 skbio/stats/__subsample.c:5393:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,994 5393 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,994 | ^ 2021-07-15T19:38:18,994 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,994 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,994 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,994 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:18,995 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:18,995 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:18,997 skbio/stats/__subsample.c:5393:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:18,997 5393 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:18,997 | ^ 2021-07-15T19:38:18,997 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:18,997 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:18,998 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:18,998 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:18,998 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:18,998 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:19,000 skbio/stats/__subsample.c:5393:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:19,000 5393 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:19,000 | ^ 2021-07-15T19:38:19,001 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:19,001 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:19,001 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:19,001 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:19,001 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:19,001 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:19,003 skbio/stats/__subsample.c:5393:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:19,003 5393 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:19,004 | ^ 2021-07-15T19:38:19,004 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:19,004 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:19,004 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:19,004 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:19,004 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:19,004 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:19,006 skbio/stats/__subsample.c:5393:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:19,007 5393 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:19,007 | ^ 2021-07-15T19:38:19,007 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:19,007 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:19,007 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:19,007 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T19:38:19,007 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T19:38:19,007 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:19,010 skbio/stats/__subsample.c:5393:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T19:38:19,010 5393 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T19:38:19,010 | ^ 2021-07-15T19:38:19,010 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T19:38:19,010 from /usr/include/python3.9/Python.h:97, 2021-07-15T19:38:19,010 from skbio/stats/__subsample.c:23: 2021-07-15T19:38:19,010 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T19:38:19,010 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T19:38:19,011 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T19:38:21,500 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/skbio/stats/__subsample.o -o build/lib.linux-armv7l-3.9/skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so 2021-07-15T19:38:21,620 building 'skbio.alignment._ssw_wrapper' extension 2021-07-15T19:38:21,621 creating build/temp.linux-armv7l-3.9/skbio/alignment 2021-07-15T19:38:21,621 creating build/temp.linux-armv7l-3.9/skbio/alignment/_lib 2021-07-15T19:38:21,622 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-3.9/skbio/alignment/_lib/ssw.o -Wno-error=declaration-after-statement 2021-07-15T19:38:21,677 skbio/alignment/_lib/ssw.c:38:10: fatal error: emmintrin.h: No such file or directory 2021-07-15T19:38:21,677 38 | #include 2021-07-15T19:38:21,678 | ^~~~~~~~~~~~~ 2021-07-15T19:38:21,678 compilation terminated. 2021-07-15T19:38:21,681 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-15T19:38:21,800 Building wheel for scikit-bio (setup.py): finished with status 'error' 2021-07-15T19:38:21,800 ERROR: Failed building wheel for scikit-bio 2021-07-15T19:38:21,801 Running setup.py clean for scikit-bio 2021-07-15T19:38:21,801 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-3dwqojt0/scikit-bio_8184639cb67b4de693a23d2bbac21a3b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-3dwqojt0/scikit-bio_8184639cb67b4de693a23d2bbac21a3b/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-15T19:38:23,178 running clean 2021-07-15T19:38:23,181 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-15T19:38:23,187 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-15T19:38:23,412 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-15T19:38:23,412 'build/scripts-3.9' does not exist -- can't clean it 2021-07-15T19:38:23,413 removing 'build' 2021-07-15T19:38:23,500 Failed to build scikit-bio 2021-07-15T19:38:23,501 ERROR: Failed to build one or more wheels 2021-07-15T19:38:23,502 Exception information: 2021-07-15T19:38:23,502 Traceback (most recent call last): 2021-07-15T19:38:23,502 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-15T19:38:23,502 status = self.run(options, args) 2021-07-15T19:38:23,502 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-15T19:38:23,502 return func(self, options, args) 2021-07-15T19:38:23,502 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-15T19:38:23,502 raise CommandError( 2021-07-15T19:38:23,502 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-15T19:38:23,504 Removed build tracker: '/tmp/pip-req-tracker-2mej9mzt'