2021-07-15T20:22:41,590 Created temporary directory: /tmp/pip-ephem-wheel-cache-igx5k7q6 2021-07-15T20:22:41,598 Created temporary directory: /tmp/pip-req-tracker-7_ym5crf 2021-07-15T20:22:41,599 Initialized build tracking at /tmp/pip-req-tracker-7_ym5crf 2021-07-15T20:22:41,599 Created build tracker: /tmp/pip-req-tracker-7_ym5crf 2021-07-15T20:22:41,600 Entered build tracker: /tmp/pip-req-tracker-7_ym5crf 2021-07-15T20:22:41,601 Created temporary directory: /tmp/pip-wheel-nuhvztbe 2021-07-15T20:22:41,642 1 location(s) to search for versions of denovonear: 2021-07-15T20:22:41,642 * https://pypi.org/simple/denovonear/ 2021-07-15T20:22:41,643 Fetching project page and analyzing links: https://pypi.org/simple/denovonear/ 2021-07-15T20:22:41,644 Getting page https://pypi.org/simple/denovonear/ 2021-07-15T20:22:41,646 Found index url https://pypi.org/simple 2021-07-15T20:22:41,895 Found link https://files.pythonhosted.org/packages/5f/25/aa72bf3769052c8002b830283a8bbacb2cd6e1a2a22c12ee9859022fece0/denovonear-0.5.0.tar.gz#sha256=a321123c913a0bde2c209e574d064032a65007545c9fe8f49ec2f0ea64c91e94 (from https://pypi.org/simple/denovonear/), version: 0.5.0 2021-07-15T20:22:41,896 Found link https://files.pythonhosted.org/packages/0a/62/5608d43d65589a21a7f6b725ec78fcce289da0e725280b7d874f8ddbe3ad/denovonear-0.5.1.tar.gz#sha256=c3c7922d17f3f1b7173077428b0721fb4d0c45fcc242b7d75a2c766c0f9a1853 (from https://pypi.org/simple/denovonear/), version: 0.5.1 2021-07-15T20:22:41,896 Found link https://files.pythonhosted.org/packages/75/b3/535a16bff66cb3cb259afae1d4e1003258b4cb4af7bc81c7b2c76adc6ff2/denovonear-0.5.2.tar.gz#sha256=c949e557ddf9691e6b48f00208f6e37f5d4d249ee8089873c6775fe67d20f661 (from https://pypi.org/simple/denovonear/), version: 0.5.2 2021-07-15T20:22:41,897 Found link https://files.pythonhosted.org/packages/38/f3/215256488f842106a640294ec42b9fe1fe4f7a7e8748b7ff6ac0374a717e/denovonear-0.5.3.tar.gz#sha256=da55e20be91e97f9a1bd83be32284afd89923d54113b00b1fe9295cbcbf662bc (from https://pypi.org/simple/denovonear/), version: 0.5.3 2021-07-15T20:22:41,898 Found link https://files.pythonhosted.org/packages/0a/ec/c9f261454f065ec4284084deffa852884382211030834ea1d29a785892de/denovonear-0.5.4.tar.gz#sha256=fa9333c246d3db5abe98d79be6bd4eeb5354e45f08421bebf7fe4f8c30ff5649 (from https://pypi.org/simple/denovonear/), version: 0.5.4 2021-07-15T20:22:41,898 Found link https://files.pythonhosted.org/packages/5f/6f/d9869072c8823a143f8022acdc017b8d726fe74b50f7ae5cca233c4e879c/denovonear-0.6.0.tar.gz#sha256=d5b8baa3eac2c0c9b5bfa3337071e527fe10ce17d38c38f39aa5fe0f5b8d9a68 (from https://pypi.org/simple/denovonear/), version: 0.6.0 2021-07-15T20:22:41,899 Found link https://files.pythonhosted.org/packages/1a/59/a68dfe4f5ac02503d88d695f2e060b00125c319933b945545b74f27a6f4d/denovonear-0.6.2.tar.gz#sha256=0e23977dab1b5cc639dc74b0321d25a353e1f0a4e384afe067870c1cb5928d40 (from https://pypi.org/simple/denovonear/), version: 0.6.2 2021-07-15T20:22:41,900 Found link https://files.pythonhosted.org/packages/e0/86/ec2d7fde0f0afea70f6861078069556d45c844d5516dd51d339ed931bed5/denovonear-0.6.3.tar.gz#sha256=679732995cf26bd83452c2f5f90b4c72064c8c3c2410097e230406112c1e73fe (from https://pypi.org/simple/denovonear/), version: 0.6.3 2021-07-15T20:22:41,900 Found link https://files.pythonhosted.org/packages/d2/65/ec29b0b96fc99df3af00de418f640f0025da30a8adf6a1fad24684e2f127/denovonear-0.6.4.tar.gz#sha256=2b71b65aea39556c16f37ff983c88e09c566317c37653a64aeadceb924a48949 (from https://pypi.org/simple/denovonear/), version: 0.6.4 2021-07-15T20:22:41,901 Found link https://files.pythonhosted.org/packages/f4/74/2b095897dc12359e79c4a0c4e31bf703c91d3022a411644d939c31c4723d/denovonear-0.7.0.tar.gz#sha256=39dffd0001805eb6bb57cda051cba82da8b198ffd297b7eb8588913fd453e5d7 (from https://pypi.org/simple/denovonear/), version: 0.7.0 2021-07-15T20:22:41,902 Found link https://files.pythonhosted.org/packages/1d/da/7e29323a5caad1d27247d9c08e4f98ef9f6332afae998c7750f72ad07306/denovonear-0.8.0.tar.gz#sha256=879ee5e01c08ecacc4dd6defd235c61f886cea453b110cd601aa3b84e9553b9d (from https://pypi.org/simple/denovonear/) (requires-python:>=3.6), version: 0.8.0 2021-07-15T20:22:41,904 Found link https://files.pythonhosted.org/packages/c4/17/06377d6ebd931ec0d1bcd7b2c0df67da483d90cc59503a4fe5c163cd6c14/denovonear-0.8.1.tar.gz#sha256=01a1fffa94a35b39e77ecafac6263d4a7a11f3ace453699e00c0761d6708e576 (from https://pypi.org/simple/denovonear/) (requires-python:>=3.6), version: 0.8.1 2021-07-15T20:22:41,905 Found link https://files.pythonhosted.org/packages/ef/b4/e860d4a4ead9864f588d6a02e1d5f5f4faa83f7c90991c5665d0161cbd55/denovonear-0.8.2.tar.gz#sha256=9ad038ee99c90af080e3fe968015ab78f9d869474b65ec95dedcf63cdee8b05f (from https://pypi.org/simple/denovonear/) (requires-python:>=3.6), version: 0.8.2 2021-07-15T20:22:41,906 Found link https://files.pythonhosted.org/packages/a8/fb/8601613cae1e1165ca87dd3f39442ae6f72768d1854cf05fc91fe54c74e3/denovonear-0.8.4.tar.gz#sha256=f725d7598a6470a5bff613253d1b7ebdf844c0ce592dfe31015e38e530e90be1 (from https://pypi.org/simple/denovonear/) (requires-python:>=3.6), version: 0.8.4 2021-07-15T20:22:41,907 Found link https://files.pythonhosted.org/packages/5e/40/6235d5a69a1954d94ffd5fe8db17ae0825866255cc69b8caf3057df33ec3/denovonear-0.8.5.tar.gz#sha256=dd656b8b43f511e26e701f7301b39f8c151893aab015f1f581ddc0a9a2ae5c13 (from https://pypi.org/simple/denovonear/) (requires-python:>=3.6), version: 0.8.5 2021-07-15T20:22:41,919 Found link https://files.pythonhosted.org/packages/51/a0/1e7699fe5b5a6ab27d2916c14ff76000d8026f85a668b1b50c7b51cdf187/denovonear-0.8.6.tar.gz#sha256=3241bfa633f723687359aa8928e7a68a82d2ffaac6eb6ce090401d9c6357fa2e (from https://pypi.org/simple/denovonear/) (requires-python:>=3.6), version: 0.8.6 2021-07-15T20:22:41,919 Skipping link: not a file: https://pypi.org/simple/denovonear/ 2021-07-15T20:22:41,990 Given no hashes to check 1 links for project 'denovonear': discarding no candidates 2021-07-15T20:22:42,042 Collecting denovonear==0.8.4 2021-07-15T20:22:42,049 Created temporary directory: /tmp/pip-unpack-p6tmh3le 2021-07-15T20:22:42,302 Downloading denovonear-0.8.4.tar.gz (215 kB) 2021-07-15T20:22:42,735 Added denovonear==0.8.4 from https://files.pythonhosted.org/packages/a8/fb/8601613cae1e1165ca87dd3f39442ae6f72768d1854cf05fc91fe54c74e3/denovonear-0.8.4.tar.gz#sha256=f725d7598a6470a5bff613253d1b7ebdf844c0ce592dfe31015e38e530e90be1 to build tracker '/tmp/pip-req-tracker-7_ym5crf' 2021-07-15T20:22:42,736 Running setup.py (path:/tmp/pip-wheel-nuhvztbe/denovonear_408afaac66c74378ac1af37879676a85/setup.py) egg_info for package denovonear 2021-07-15T20:22:42,737 Created temporary directory: /tmp/pip-pip-egg-info-zoutab3q 2021-07-15T20:22:42,738 Running command python setup.py egg_info 2021-07-15T20:22:52,245 Compiling denovonear/weights.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/vector.pxd. 2021-07-15T20:22:52,246 Compiling denovonear/transcript.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/vector.pxd. 2021-07-15T20:22:52,247 Compiling denovonear/site_specific_rates.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libcpp/vector.pxd. 2021-07-15T20:22:52,247 [1/3] Cythonizing denovonear/site_specific_rates.pyx 2021-07-15T20:22:52,247 [2/3] Cythonizing denovonear/weights.pyx 2021-07-15T20:22:52,248 [3/3] Cythonizing denovonear/transcript.pyx 2021-07-15T20:22:52,783 running egg_info 2021-07-15T20:22:52,785 creating /tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info 2021-07-15T20:22:52,787 writing /tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/PKG-INFO 2021-07-15T20:22:52,792 writing dependency_links to /tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/dependency_links.txt 2021-07-15T20:22:52,800 writing entry points to /tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/entry_points.txt 2021-07-15T20:22:52,803 writing requirements to /tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/requires.txt 2021-07-15T20:22:52,805 writing top-level names to /tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/top_level.txt 2021-07-15T20:22:52,808 writing manifest file '/tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/SOURCES.txt' 2021-07-15T20:22:53,242 reading manifest file '/tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/SOURCES.txt' 2021-07-15T20:22:53,246 reading manifest template 'MANIFEST.in' 2021-07-15T20:22:53,272 writing manifest file '/tmp/pip-pip-egg-info-zoutab3q/denovonear.egg-info/SOURCES.txt' 2021-07-15T20:22:53,809 Source in /tmp/pip-wheel-nuhvztbe/denovonear_408afaac66c74378ac1af37879676a85 has version 0.8.4, which satisfies requirement denovonear==0.8.4 from https://files.pythonhosted.org/packages/a8/fb/8601613cae1e1165ca87dd3f39442ae6f72768d1854cf05fc91fe54c74e3/denovonear-0.8.4.tar.gz#sha256=f725d7598a6470a5bff613253d1b7ebdf844c0ce592dfe31015e38e530e90be1 2021-07-15T20:22:53,810 Removed denovonear==0.8.4 from https://files.pythonhosted.org/packages/a8/fb/8601613cae1e1165ca87dd3f39442ae6f72768d1854cf05fc91fe54c74e3/denovonear-0.8.4.tar.gz#sha256=f725d7598a6470a5bff613253d1b7ebdf844c0ce592dfe31015e38e530e90be1 from build tracker '/tmp/pip-req-tracker-7_ym5crf' 2021-07-15T20:22:53,833 Created temporary directory: /tmp/pip-unpack-5p0gdxmq 2021-07-15T20:22:53,834 Building wheels for collected packages: denovonear 2021-07-15T20:22:53,840 Created temporary directory: /tmp/pip-wheel-2btrkryf 2021-07-15T20:22:53,840 Building wheel for denovonear (setup.py): started 2021-07-15T20:22:53,841 Destination directory: /tmp/pip-wheel-2btrkryf 2021-07-15T20:22:53,841 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-nuhvztbe/denovonear_408afaac66c74378ac1af37879676a85/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-nuhvztbe/denovonear_408afaac66c74378ac1af37879676a85/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-2btrkryf 2021-07-15T20:22:57,943 running bdist_wheel 2021-07-15T20:22:57,963 running build 2021-07-15T20:22:57,963 running build_py 2021-07-15T20:22:58,308 creating build 2021-07-15T20:22:58,309 creating build/lib.linux-armv7l-3.9 2021-07-15T20:22:58,310 creating build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,312 copying denovonear/ensembl_cache.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,316 copying denovonear/load_mutation_rates.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,319 copying denovonear/log_transform_rates.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,323 copying denovonear/rate_limiter_retries.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,326 copying denovonear/cluster_test.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,330 copying denovonear/frameshift_rate.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,333 copying denovonear/load_de_novos.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,335 copying denovonear/load_gene.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,340 copying denovonear/__init__.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,343 copying denovonear/ensembl_requester.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,347 copying denovonear/rate_limiter.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,350 copying denovonear/__main__.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,354 copying denovonear/simulate.py -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,357 creating build/lib.linux-armv7l-3.9/denovonear/data 2021-07-15T20:22:58,359 copying denovonear/data/rates.txt -> build/lib.linux-armv7l-3.9/denovonear/data 2021-07-15T20:22:58,364 copying denovonear/weights.pxd -> build/lib.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,370 running build_ext 2021-07-15T20:22:58,377 building 'denovonear.weights' extension 2021-07-15T20:22:58,378 creating build/temp.linux-armv7l-3.9 2021-07-15T20:22:58,379 creating build/temp.linux-armv7l-3.9/denovonear 2021-07-15T20:22:58,381 creating build/temp.linux-armv7l-3.9/src 2021-07-15T20:22:58,382 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c denovonear/weights.cpp -o build/temp.linux-armv7l-3.9/denovonear/weights.o -std=c++11 2021-07-15T20:23:11,103 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c src/simulate.cpp -o build/temp.linux-armv7l-3.9/src/simulate.o -std=c++11 2021-07-15T20:23:14,003 In file included from /usr/include/c++/10/bits/stl_algo.h:61, 2021-07-15T20:23:14,004 from /usr/include/c++/10/algorithm:62, 2021-07-15T20:23:14,004 from src/simulate.cpp:2: 2021-07-15T20:23:14,004 /usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2021-07-15T20:23:14,004 /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,005 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2021-07-15T20:23:14,005 | ^~~~~~~~~~~~~ 2021-07-15T20:23:14,105 In file included from /usr/include/c++/10/algorithm:62, 2021-07-15T20:23:14,105 from src/simulate.cpp:2: 2021-07-15T20:23:14,106 /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2021-07-15T20:23:14,106 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,106 1839 | __insertion_sort(_RandomAccessIterator __first, 2021-07-15T20:23:14,106 | ^~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,106 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,107 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,214 /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2021-07-15T20:23:14,214 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,214 1945 | __introsort_loop(_RandomAccessIterator __first, 2021-07-15T20:23:14,215 | ^~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,215 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,215 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,215 /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,215 1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2021-07-15T20:23:14,216 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,604 In file included from /usr/include/c++/10/vector:72, 2021-07-15T20:23:14,604 from src/simulate.cpp:4: 2021-07-15T20:23:14,605 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2021-07-15T20:23:14,605 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:23:14,605 426 | vector<_Tp, _Alloc>:: 2021-07-15T20:23:14,605 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,709 /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector _simulate_distribution(Chooser&, int, int)’: 2021-07-15T20:23:14,710 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,710 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2021-07-15T20:23:14,711 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,711 In file included from /usr/include/c++/10/algorithm:62, 2021-07-15T20:23:14,711 from src/simulate.cpp:2: 2021-07-15T20:23:14,712 /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,712 1974 | std::__introsort_loop(__first, __last, 2021-07-15T20:23:14,712 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,713 1975 | std::__lg(__last - __first) * 2, 2021-07-15T20:23:14,713 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,713 1976 | __comp); 2021-07-15T20:23:14,714 | ~~~~~~~ 2021-07-15T20:23:14,714 /usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,714 1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2021-07-15T20:23:14,715 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:14,715 /usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:14,715 1891 | std::__insertion_sort(__first, __last, __comp); 2021-07-15T20:23:14,716 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:15,385 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c src/weighted_choice.cpp -o build/temp.linux-armv7l-3.9/src/weighted_choice.o -std=c++11 2021-07-15T20:23:17,929 In file included from /usr/include/c++/10/vector:72, 2021-07-15T20:23:17,929 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:23:17,929 from /usr/include/c++/10/random:49, 2021-07-15T20:23:17,930 from src/weighted_choice.cpp:1: 2021-07-15T20:23:17,930 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2021-07-15T20:23:17,931 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:23:17,931 426 | vector<_Tp, _Alloc>:: 2021-07-15T20:23:17,931 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:18,035 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const AlleleChoice&}; _Tp = AlleleChoice; _Alloc = std::allocator]’: 2021-07-15T20:23:18,036 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:23:18,234 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {AlleleChoice}; _Tp = AlleleChoice; _Alloc = std::allocator]’: 2021-07-15T20:23:18,234 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:23:18,400 In file included from /usr/include/c++/10/vector:67, 2021-07-15T20:23:18,400 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:23:18,400 from /usr/include/c++/10/random:49, 2021-07-15T20:23:18,400 from src/weighted_choice.cpp:1: 2021-07-15T20:23:18,401 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void Chooser::add_choice(int, double, std::string, std::string, int)’: 2021-07-15T20:23:18,401 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:18,401 1198 | _M_realloc_insert(end(), __x); 2021-07-15T20:23:18,401 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2021-07-15T20:23:18,402 In file included from /usr/include/c++/10/vector:72, 2021-07-15T20:23:18,402 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:23:18,402 from /usr/include/c++/10/random:49, 2021-07-15T20:23:18,402 from src/weighted_choice.cpp:1: 2021-07-15T20:23:18,402 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:18,403 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2021-07-15T20:23:18,403 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:18,504 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2021-07-15T20:23:18,505 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:23:18,505 426 | vector<_Tp, _Alloc>:: 2021-07-15T20:23:18,505 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:18,571 /usr/include/c++/10/bits/vector.tcc: In member function ‘void Chooser::append(Chooser)’: 2021-07-15T20:23:18,571 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:18,571 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2021-07-15T20:23:18,572 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:23:18,573 In file included from /usr/include/c++/10/vector:67, 2021-07-15T20:23:18,573 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:23:18,573 from /usr/include/c++/10/random:49, 2021-07-15T20:23:18,574 from src/weighted_choice.cpp:1: 2021-07-15T20:23:18,574 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:23:18,574 1198 | _M_realloc_insert(end(), __x); 2021-07-15T20:23:18,574 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2021-07-15T20:23:19,249 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/denovonear/weights.o build/temp.linux-armv7l-3.9/src/simulate.o build/temp.linux-armv7l-3.9/src/weighted_choice.o -o build/lib.linux-armv7l-3.9/denovonear/weights.cpython-39-arm-linux-gnueabihf.so 2021-07-15T20:23:19,709 building 'denovonear.transcript' extension 2021-07-15T20:23:19,709 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c denovonear/transcript.cpp -o build/temp.linux-armv7l-3.9/denovonear/transcript.o -std=c++11 2021-07-15T20:23:54,873 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c src/tx.cpp -o build/temp.linux-armv7l-3.9/src/tx.o -std=c++11 2021-07-15T20:24:11,119 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/denovonear/transcript.o build/temp.linux-armv7l-3.9/src/tx.o -o build/lib.linux-armv7l-3.9/denovonear/transcript.cpython-39-arm-linux-gnueabihf.so 2021-07-15T20:24:11,747 building 'denovonear.site_specific_rates' extension 2021-07-15T20:24:11,748 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c denovonear/site_specific_rates.cpp -o build/temp.linux-armv7l-3.9/denovonear/site_specific_rates.o -std=c++11 2021-07-15T20:24:35,749 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c src/site_rates.cpp -o build/temp.linux-armv7l-3.9/src/site_rates.o -std=c++11 2021-07-15T20:24:46,379 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c src/tx.cpp -o build/temp.linux-armv7l-3.9/src/tx.o -std=c++11 2021-07-15T20:25:05,738 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/ -I/usr/include/python3.9 -c src/weighted_choice.cpp -o build/temp.linux-armv7l-3.9/src/weighted_choice.o -std=c++11 2021-07-15T20:25:09,829 In file included from /usr/include/c++/10/vector:72, 2021-07-15T20:25:09,829 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:25:09,830 from /usr/include/c++/10/random:49, 2021-07-15T20:25:09,830 from src/weighted_choice.cpp:1: 2021-07-15T20:25:09,830 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2021-07-15T20:25:09,830 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:25:09,830 426 | vector<_Tp, _Alloc>:: 2021-07-15T20:25:09,831 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T20:25:10,039 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const AlleleChoice&}; _Tp = AlleleChoice; _Alloc = std::allocator]’: 2021-07-15T20:25:10,039 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:25:10,408 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {AlleleChoice}; _Tp = AlleleChoice; _Alloc = std::allocator]’: 2021-07-15T20:25:10,408 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:25:10,759 In file included from /usr/include/c++/10/vector:67, 2021-07-15T20:25:10,759 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:25:10,760 from /usr/include/c++/10/random:49, 2021-07-15T20:25:10,760 from src/weighted_choice.cpp:1: 2021-07-15T20:25:10,760 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void Chooser::add_choice(int, double, std::string, std::string, int)’: 2021-07-15T20:25:10,760 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:25:10,761 1198 | _M_realloc_insert(end(), __x); 2021-07-15T20:25:10,761 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2021-07-15T20:25:10,761 In file included from /usr/include/c++/10/vector:72, 2021-07-15T20:25:10,762 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:25:10,762 from /usr/include/c++/10/random:49, 2021-07-15T20:25:10,762 from src/weighted_choice.cpp:1: 2021-07-15T20:25:10,762 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:25:10,762 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2021-07-15T20:25:10,763 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:25:11,012 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2021-07-15T20:25:11,013 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2021-07-15T20:25:11,013 426 | vector<_Tp, _Alloc>:: 2021-07-15T20:25:11,013 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T20:25:11,152 /usr/include/c++/10/bits/vector.tcc: In member function ‘void Chooser::append(Chooser)’: 2021-07-15T20:25:11,153 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:25:11,153 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2021-07-15T20:25:11,153 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T20:25:11,154 In file included from /usr/include/c++/10/vector:67, 2021-07-15T20:25:11,154 from /usr/include/c++/10/bits/random.h:34, 2021-07-15T20:25:11,154 from /usr/include/c++/10/random:49, 2021-07-15T20:25:11,155 from src/weighted_choice.cpp:1: 2021-07-15T20:25:11,155 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2021-07-15T20:25:11,155 1198 | _M_realloc_insert(end(), __x); 2021-07-15T20:25:11,155 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2021-07-15T20:25:11,946 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/denovonear/site_specific_rates.o build/temp.linux-armv7l-3.9/src/site_rates.o build/temp.linux-armv7l-3.9/src/tx.o build/temp.linux-armv7l-3.9/src/weighted_choice.o -o build/lib.linux-armv7l-3.9/denovonear/site_specific_rates.cpython-39-arm-linux-gnueabihf.so 2021-07-15T20:25:12,815 installing to build/bdist.linux-armv7l/wheel 2021-07-15T20:25:12,815 running install 2021-07-15T20:25:12,816 running install_lib 2021-07-15T20:25:12,840 creating build/bdist.linux-armv7l 2021-07-15T20:25:12,841 creating build/bdist.linux-armv7l/wheel 2021-07-15T20:25:12,844 creating build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:12,846 copying build/lib.linux-armv7l-3.9/denovonear/weights.pxd -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:12,850 copying build/lib.linux-armv7l-3.9/denovonear/ensembl_cache.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:12,855 copying build/lib.linux-armv7l-3.9/denovonear/weights.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:12,911 copying build/lib.linux-armv7l-3.9/denovonear/load_mutation_rates.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:12,918 creating build/bdist.linux-armv7l/wheel/denovonear/data 2021-07-15T20:25:12,930 copying build/lib.linux-armv7l-3.9/denovonear/data/rates.txt -> build/bdist.linux-armv7l/wheel/denovonear/data 2021-07-15T20:25:12,934 copying build/lib.linux-armv7l-3.9/denovonear/site_specific_rates.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,014 copying build/lib.linux-armv7l-3.9/denovonear/log_transform_rates.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,016 copying build/lib.linux-armv7l-3.9/denovonear/rate_limiter_retries.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,019 copying build/lib.linux-armv7l-3.9/denovonear/cluster_test.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,021 copying build/lib.linux-armv7l-3.9/denovonear/frameshift_rate.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,024 copying build/lib.linux-armv7l-3.9/denovonear/load_de_novos.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,026 copying build/lib.linux-armv7l-3.9/denovonear/load_gene.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,029 copying build/lib.linux-armv7l-3.9/denovonear/__init__.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,032 copying build/lib.linux-armv7l-3.9/denovonear/ensembl_requester.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,035 copying build/lib.linux-armv7l-3.9/denovonear/transcript.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,133 copying build/lib.linux-armv7l-3.9/denovonear/rate_limiter.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,136 copying build/lib.linux-armv7l-3.9/denovonear/__main__.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,139 copying build/lib.linux-armv7l-3.9/denovonear/simulate.py -> build/bdist.linux-armv7l/wheel/denovonear 2021-07-15T20:25:13,141 running install_egg_info 2021-07-15T20:25:13,213 running egg_info 2021-07-15T20:25:13,214 writing denovonear.egg-info/PKG-INFO 2021-07-15T20:25:13,217 writing dependency_links to denovonear.egg-info/dependency_links.txt 2021-07-15T20:25:13,220 writing entry points to denovonear.egg-info/entry_points.txt 2021-07-15T20:25:13,222 writing requirements to denovonear.egg-info/requires.txt 2021-07-15T20:25:13,223 writing top-level names to denovonear.egg-info/top_level.txt 2021-07-15T20:25:13,240 reading manifest file 'denovonear.egg-info/SOURCES.txt' 2021-07-15T20:25:13,253 reading manifest template 'MANIFEST.in' 2021-07-15T20:25:13,270 writing manifest file 'denovonear.egg-info/SOURCES.txt' 2021-07-15T20:25:13,273 Copying denovonear.egg-info to build/bdist.linux-armv7l/wheel/denovonear-0.8.4-py3.9.egg-info 2021-07-15T20:25:13,295 running install_scripts 2021-07-15T20:25:13,391 creating build/bdist.linux-armv7l/wheel/denovonear-0.8.4.dist-info/WHEEL 2021-07-15T20:25:13,410 creating '/tmp/pip-wheel-2btrkryf/denovonear-0.8.4-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-15T20:25:13,414 adding 'denovonear/__init__.py' 2021-07-15T20:25:13,417 adding 'denovonear/__main__.py' 2021-07-15T20:25:13,419 adding 'denovonear/cluster_test.py' 2021-07-15T20:25:13,421 adding 'denovonear/ensembl_cache.py' 2021-07-15T20:25:13,440 adding 'denovonear/ensembl_requester.py' 2021-07-15T20:25:13,443 adding 'denovonear/frameshift_rate.py' 2021-07-15T20:25:13,444 adding 'denovonear/load_de_novos.py' 2021-07-15T20:25:13,447 adding 'denovonear/load_gene.py' 2021-07-15T20:25:13,449 adding 'denovonear/load_mutation_rates.py' 2021-07-15T20:25:13,460 adding 'denovonear/log_transform_rates.py' 2021-07-15T20:25:13,462 adding 'denovonear/rate_limiter.py' 2021-07-15T20:25:13,464 adding 'denovonear/rate_limiter_retries.py' 2021-07-15T20:25:13,465 adding 'denovonear/simulate.py' 2021-07-15T20:25:14,867 adding 'denovonear/site_specific_rates.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T20:25:15,731 adding 'denovonear/transcript.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T20:25:16,086 adding 'denovonear/weights.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T20:25:16,096 adding 'denovonear/weights.pxd' 2021-07-15T20:25:16,099 adding 'denovonear/data/rates.txt' 2021-07-15T20:25:16,103 adding 'denovonear-0.8.4.dist-info/METADATA' 2021-07-15T20:25:16,105 adding 'denovonear-0.8.4.dist-info/WHEEL' 2021-07-15T20:25:16,107 adding 'denovonear-0.8.4.dist-info/entry_points.txt' 2021-07-15T20:25:16,109 adding 'denovonear-0.8.4.dist-info/top_level.txt' 2021-07-15T20:25:16,111 adding 'denovonear-0.8.4.dist-info/RECORD' 2021-07-15T20:25:16,154 removing build/bdist.linux-armv7l/wheel 2021-07-15T20:25:16,440 Building wheel for denovonear (setup.py): finished with status 'done' 2021-07-15T20:25:16,511 Created wheel for denovonear: filename=denovonear-0.8.4-cp39-cp39-linux_armv7l.whl size=2266815 sha256=60f0183a3f664a68f3ed2a4a2d27fb6b8b76e7e726d211b4288755205b71e2ae 2021-07-15T20:25:16,511 Stored in directory: /tmp/pip-ephem-wheel-cache-igx5k7q6/wheels/02/ed/52/275cf19b547c5ee97f75eca818b02c23efa7c87303391f9157 2021-07-15T20:25:16,528 Successfully built denovonear 2021-07-15T20:25:16,619 Removed build tracker: '/tmp/pip-req-tracker-7_ym5crf'