2021-07-16T00:16:47,639 Created temporary directory: /tmp/pip-ephem-wheel-cache-bx5i7nd8 2021-07-16T00:16:47,641 Created temporary directory: /tmp/pip-req-tracker-4wbnw89r 2021-07-16T00:16:47,642 Initialized build tracking at /tmp/pip-req-tracker-4wbnw89r 2021-07-16T00:16:47,642 Created build tracker: /tmp/pip-req-tracker-4wbnw89r 2021-07-16T00:16:47,642 Entered build tracker: /tmp/pip-req-tracker-4wbnw89r 2021-07-16T00:16:47,642 Created temporary directory: /tmp/pip-wheel-94ce_1sl 2021-07-16T00:16:47,669 1 location(s) to search for versions of mgkit: 2021-07-16T00:16:47,669 * https://pypi.org/simple/mgkit/ 2021-07-16T00:16:47,670 Fetching project page and analyzing links: https://pypi.org/simple/mgkit/ 2021-07-16T00:16:47,670 Getting page https://pypi.org/simple/mgkit/ 2021-07-16T00:16:47,672 Found index url https://pypi.org/simple 2021-07-16T00:16:47,858 Found link https://files.pythonhosted.org/packages/79/a0/40ef7592a18a3a15ed08222e5ee8aea3632821585918dc4b7f82a6ba9f8c/mgkit-0.1.10.tar.gz#sha256=cb221a732000713fd1b8b7e0a9c27fcf627d84ccd4a8f436b219de6ef663f40c (from https://pypi.org/simple/mgkit/), version: 0.1.10 2021-07-16T00:16:47,858 Found link https://files.pythonhosted.org/packages/91/57/15b259097a455e4d5c2b89fe2218f3cbdb1eae0e0dd861759f3e09d968ce/mgkit-0.1.11.tar.gz#sha256=03961e790667cbdef223e426e26c4a8bb134f1c97fd94b37b1381dbc8dd071d4 (from https://pypi.org/simple/mgkit/), version: 0.1.11 2021-07-16T00:16:47,859 Found link https://files.pythonhosted.org/packages/87/d8/bdb7fc80e9ab0953c76290a706f7042ebf5139dc5f74968bab1cbcaf01c0/mgkit-0.1.12.tar.gz#sha256=0927dbf3a5312c921b5e5f56901a3e1a7ef4f23b6407f72aced47418b85e6028 (from https://pypi.org/simple/mgkit/), version: 0.1.12 2021-07-16T00:16:47,859 Found link 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tags (py2-none-any) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/7c/36/2991fd0a032c8e7f7dae0b33a7139148df149968409c445e54bc8e0380b1/mgkit-0.2.3-py2-none-any.whl#sha256=b80dd8ce8e4c5f7a755ceded51d60810a5e58560ae6221d2e6411d83e83a64e1 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,881 Found link https://files.pythonhosted.org/packages/f7/14/88dd1e83833dba85b017f4fccba17ade03707347bf77bb88f3c8c48d16dc/mgkit-0.2.3.macosx-10.11-intel.tar.gz#sha256=1ea940960fd3fef9fab61ef66e78462f8c96eb7fd01582cb57a9f7080715178c (from https://pypi.org/simple/mgkit/), version: 0.2.3.macosx-10.11-intel 2021-07-16T00:16:47,882 Found link https://files.pythonhosted.org/packages/50/3c/43f9fb982f43d1cf5ffb9906c6e122e215c088c712f8fb6c7cc6a97e572f/mgkit-0.2.3.tar.gz#sha256=d679d048e9500f088c305bdef350af43fc7830b029dc7c4f0c5ef3799b04648a (from https://pypi.org/simple/mgkit/), version: 0.2.3 2021-07-16T00:16:47,882 Skipping link: none of the wheel's tags (py2-none-any) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/5b/e5/4798a81b8912de65332fed4de0ddf46a0ad22787928f59fe70a5aedcece5/mgkit-0.2.4-py2-none-any.whl#sha256=632ef692699c2ee53e2d82a03100e8a53966705f6b33d11ea3157282646bd80e (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,883 Found link https://files.pythonhosted.org/packages/dd/79/b808c7db6e8f3d5a414219ab18d1bf43ee049be3cc48c38462dc582bafc6/mgkit-0.2.4.macosx-10.11-intel.tar.gz#sha256=db24fbb3cd8020c51da073ce6eec1b9379f99fb7f616d427203ce4800ed99fd3 (from https://pypi.org/simple/mgkit/), version: 0.2.4.macosx-10.11-intel 2021-07-16T00:16:47,883 Found link https://files.pythonhosted.org/packages/7b/7b/a015ad8e0d60135088f4cedaf750e7bd789189b4e1b9384a4c1022923710/mgkit-0.2.4.tar.gz#sha256=3c8278d3671242255ad89c1122a0e12edb596997bd58e3e181e74b5964e94f4e (from https://pypi.org/simple/mgkit/), version: 0.2.4 2021-07-16T00:16:47,883 Skipping link: none of the wheel's tags (py2-none-any) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/50/19/be4c1d3d8fce83f594a69af6f9098ee3efb59d6ef7988e3cf9262b8f753b/mgkit-0.2.5-py2-none-any.whl#sha256=c48123143f9cca6c158a9a9de41f8b7b82d6f58bfc717f46b2830bda2ccf2776 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,884 Found link https://files.pythonhosted.org/packages/e6/7d/093121f7d6921d0203c678fb566dadfe3d9442bee23800b655f045060ed7/mgkit-0.2.5.macosx-10.11-intel.tar.gz#sha256=13926193d29720e9e6dd242b290453c0093be67629087b51f398fa29992af2c6 (from https://pypi.org/simple/mgkit/), version: 0.2.5.macosx-10.11-intel 2021-07-16T00:16:47,884 Found link https://files.pythonhosted.org/packages/56/8b/c848c8af1b4affa444c5a72362e7cee472ad28f948dfc9af147770ff2cde/mgkit-0.2.5.tar.gz#sha256=bcb15ea755a7afab1c3291ce9afd9e3467429cbe29b5e92890e6a7d28326f2f8 (from https://pypi.org/simple/mgkit/), version: 0.2.5 2021-07-16T00:16:47,885 Skipping link: none of the wheel's tags (py2-none-any) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/51/9f/0009ca2558c00693d16a21914466edaf46a7ccb26dda9b0c6cfe0f8f96e3/mgkit-0.3.0-py2-none-any.whl#sha256=ef5831c86d2807d4b8a43f51bb58e97f6b6fbb092a7aaee0df4ab294c08862f0 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,885 Found link https://files.pythonhosted.org/packages/4a/59/7c098894b744f8f938eae8401f37bafda7460416a674a39d3c31a19dc49d/mgkit-0.3.0.macosx-10.11-intel.tar.gz#sha256=ab8705e2e89dfca72142008cb8d507df405f1fdc4dbef24aad285159dc2c4ada (from https://pypi.org/simple/mgkit/), version: 0.3.0.macosx-10.11-intel 2021-07-16T00:16:47,885 Found link https://files.pythonhosted.org/packages/bd/2b/a227340be64f3ab18ee4e864b87803f1f613bb700f355bcefd6ea20d3680/mgkit-0.3.0.tar.gz#sha256=07738f5bcaf94ea94696ed34852b1f8837012dd3b584349d1b131c21e8e87bfd (from https://pypi.org/simple/mgkit/), version: 0.3.0 2021-07-16T00:16:47,886 Skipping link: none of the wheel's tags (cp27-none-macosx_10_11_intel) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e3/11/1e96964180416f118726ff9681ab45e8651464333bfd295f8085e02e7d38/mgkit-0.3.2-cp27-none-macosx_10_11_intel.whl#sha256=cc1866b20fd71ad829f21e6d69becc8d874d104121681e736be087829554c8d3 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,886 Found link https://files.pythonhosted.org/packages/28/2d/6e7b11f026942135e101890bc7b649e55ca8bad5115c7c5013b17af1b799/mgkit-0.3.2.tar.gz#sha256=dc49bf1ab983528a5673c4a0f1fb9a36d80e0f3cfcb22088d3c5300e85d97a26 (from https://pypi.org/simple/mgkit/), version: 0.3.2 2021-07-16T00:16:47,886 Found link https://files.pythonhosted.org/packages/dc/b1/b5133106dda33d9726afc858f3ef47ad51391ec2e43731510fc8af478296/mgkit-0.3.3.tar.gz#sha256=d9104d0c4113e3efafc140ff2e7af634fa2448c7e2584e17e66fea4d8105092a (from https://pypi.org/simple/mgkit/), version: 0.3.3 2021-07-16T00:16:47,887 Found link 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Found link https://files.pythonhosted.org/packages/1e/6e/9bacfeee743cccc4b7b0504eea4b79a19c5104ea647240b0a1781265efe3/mgkit-0.4.3.tar.gz#sha256=8b4276ffbe3a25bd296cbcba866610fccee1257cf16d69e8e6813dc49c0b4a89 (from https://pypi.org/simple/mgkit/), version: 0.4.3 2021-07-16T00:16:47,889 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/13/a3/6d260cf0ec7aeb5f7739bbc08a682a05d0c758be62823b3f4b0c50973d6f/mgkit-0.5.0-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=75d4d527e6744e689cf910ae6cb452c4b077bc5dee3667cd06cec6ffab0afdac (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,889 Found link https://files.pythonhosted.org/packages/c7/f5/71856cbc1598e7d04a8636c158df2f5e07f2e75de908782a30faf975dce5/mgkit-0.5.0.tar.gz#sha256=98c757ecc2b640adbeb27563535f4f218dae65646bf8b20e947388fa3735ee77 (from https://pypi.org/simple/mgkit/), version: 0.5.0 2021-07-16T00:16:47,890 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/45/60/4151bf950a55bc4a3ec463590eb1c1b5f19a709c2888c6b431d15bf6fa65/mgkit-0.5.1-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=7d060198311bd9d1210a6b0973ba81aa82bcbf98808341d1d582cc9c06d2e814 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,890 Found link https://files.pythonhosted.org/packages/4b/c7/7477ef3c06b3cebd434305f0a15badf6be9697dbac4034e7dfb9864a031e/mgkit-0.5.1.tar.gz#sha256=0c9d51396f0f0074639d2a467c92f8a4bddaa7dead652896311e8e661d802705 (from https://pypi.org/simple/mgkit/), version: 0.5.1 2021-07-16T00:16:47,891 Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/03/68/56e2a61d2173b70764f1e74a4f2845f761506d105d372cc6e0446b25aff4/mgkit-0.5.2-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=8b0c81ecbd0b68ec1fc92b6a75f17780f731eec4b7e138d5199b05c5e9c0e5c3 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,891 Found link https://files.pythonhosted.org/packages/5d/f0/502390012e7d6ee3116745103845b46308982bebc71ce03ad4a0cc8eaddd/mgkit-0.5.2.tar.gz#sha256=09b651f16f574d2e2035d38c1ebfcda831e003879a3610ee159e56bbc5c9f525 (from https://pypi.org/simple/mgkit/), version: 0.5.2 2021-07-16T00:16:47,891 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/6b/63/5da8ebd4fbd4bc8da9e4781cb081b0d7ca4ebab8695d557b932c44764469/mgkit-0.5.3-cp38-cp38-macosx_10_9_x86_64.whl#sha256=6fa9bfbd846f3af280c584da0063aa7edadd8f985144022201d223dab652457c (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,892 Found link https://files.pythonhosted.org/packages/b4/16/8bc71a99d55881d31d80a8de2a4c38bae06f52fcbe1ebf1aacafae5b096d/mgkit-0.5.3.tar.gz#sha256=391e97a40ecd74a4d07d179be563c38fb6158e79727863db890cea87e139b9e4 (from https://pypi.org/simple/mgkit/), version: 0.5.3 2021-07-16T00:16:47,892 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/db/b1/02cdce1781c53d7f71fec5f1fd6f23de735127037783fc6d12e1ae7ae535/mgkit-0.5.4-cp38-cp38-macosx_10_9_x86_64.whl#sha256=99a0c8f70265ca2272497ff6dd2f57516d71d36508324a7180e0b901abcad530 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,892 Found link https://files.pythonhosted.org/packages/74/80/25255ea4d63da6108f297c5764d555ac81f1ddea90bd85ded6e6bdb3eded/mgkit-0.5.4.tar.gz#sha256=dae7e72dd3fab98328b9b26969088716dbf8245be61fb6495f55459bc608b25b (from https://pypi.org/simple/mgkit/), version: 0.5.4 2021-07-16T00:16:47,893 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/62/52/68c5b85d4f8a14a8db73c5b73c151adefd15b07d1c1aec2a9ccf72b5c2ad/mgkit-0.5.5-cp38-cp38-macosx_10_9_x86_64.whl#sha256=b6b7c04baf27df8251334f126bb59d41f2eeac58872612ab20b631e5dda2e5cb (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,893 Found link https://files.pythonhosted.org/packages/11/cd/aafab787514f3b2b61fbf03f2cd415c4b4e38455c863aacae6e9655de0b3/mgkit-0.5.5.tar.gz#sha256=ff53d622ddc7d6c2e9d1355b68b80879e7e3f56eeb8fe2c59704ef231ab80922 (from https://pypi.org/simple/mgkit/), version: 0.5.5 2021-07-16T00:16:47,893 Skipping link: none of the wheel's tags (cp38-cp38-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/38/08/a9bb0df31aee34219a48c48b3b167e5ec2a45639f7cb04b8ebf97a2f6d2b/mgkit-0.5.6-cp38-cp38-macosx_10_9_x86_64.whl#sha256=d28937d2713456f464c9a52badf36146238821c0e2f8278221bd2268ccb302d4 (from https://pypi.org/simple/mgkit/) 2021-07-16T00:16:47,894 Found link https://files.pythonhosted.org/packages/52/8b/4917c3f4572d5413771b360286ca880ad3bd01b682b436b51c7d8cf04e63/mgkit-0.5.6.tar.gz#sha256=5cc88cd04280e3d078b42da2dc8635b7e702680a1bedb7d3bdf9746a3a63a394 (from https://pypi.org/simple/mgkit/), version: 0.5.6 2021-07-16T00:16:47,894 Skipping link: not a file: https://pypi.org/simple/mgkit/ 2021-07-16T00:16:47,900 Given no hashes to check 1 links for project 'mgkit': discarding no candidates 2021-07-16T00:16:47,919 Collecting mgkit==0.4.3 2021-07-16T00:16:47,921 Created temporary directory: /tmp/pip-unpack-0tip0ees 2021-07-16T00:16:49,180 Downloading mgkit-0.4.3.tar.gz (11.6 MB) 2021-07-16T00:16:51,425 Added mgkit==0.4.3 from https://files.pythonhosted.org/packages/1e/6e/9bacfeee743cccc4b7b0504eea4b79a19c5104ea647240b0a1781265efe3/mgkit-0.4.3.tar.gz#sha256=8b4276ffbe3a25bd296cbcba866610fccee1257cf16d69e8e6813dc49c0b4a89 to build tracker '/tmp/pip-req-tracker-4wbnw89r' 2021-07-16T00:16:51,426 Running setup.py (path:/tmp/pip-wheel-94ce_1sl/mgkit_75291bab44ef409297afe2947836c08c/setup.py) egg_info for package mgkit 2021-07-16T00:16:51,427 Created temporary directory: /tmp/pip-pip-egg-info-psr54uvl 2021-07-16T00:16:51,427 Running command python setup.py egg_info 2021-07-16T00:16:52,497 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-16T00:16:52,497 warnings.warn( 2021-07-16T00:16:55,250 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-16T00:16:55,250 warnings.warn( 2021-07-16T00:16:55,273 running egg_info 2021-07-16T00:16:55,275 creating /tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info 2021-07-16T00:16:55,277 writing /tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/PKG-INFO 2021-07-16T00:16:55,279 writing dependency_links to /tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/dependency_links.txt 2021-07-16T00:16:55,280 writing entry points to /tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/entry_points.txt 2021-07-16T00:16:55,282 writing requirements to /tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/requires.txt 2021-07-16T00:16:55,283 writing top-level names to /tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/top_level.txt 2021-07-16T00:16:55,285 writing manifest file '/tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/SOURCES.txt' 2021-07-16T00:16:55,682 reading manifest file '/tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/SOURCES.txt' 2021-07-16T00:16:55,684 reading manifest template 'MANIFEST.in' 2021-07-16T00:16:55,742 warning: no previously-included files matching '*' found under directory 'docs/build' 2021-07-16T00:16:55,778 warning: no previously-included files matching '*' found under directory 'tests/mg_data' 2021-07-16T00:16:55,779 warning: no previously-included files matching '*.gz' found under directory 'docs/source/examples/db' 2021-07-16T00:16:55,780 warning: no previously-included files matching 'asse*' found under directory 'docs/source/examples/db' 2021-07-16T00:16:55,781 warning: no previously-included files matching 'gff-dbm' found under directory 'docs/source/examples/db' 2021-07-16T00:16:55,781 warning: no previously-included files matching '.DS_Store' found under directory 'docs' 2021-07-16T00:16:55,782 warning: no previously-included files matching '__MACOSX' found under directory '.' 2021-07-16T00:16:55,783 warning: no previously-included files matching 'tutorial-*data*' found under directory 'docs/source/pipeline/' 2021-07-16T00:16:55,793 writing manifest file '/tmp/pip-pip-egg-info-psr54uvl/mgkit.egg-info/SOURCES.txt' 2021-07-16T00:16:55,881 Source in /tmp/pip-wheel-94ce_1sl/mgkit_75291bab44ef409297afe2947836c08c has version 0.4.3, which satisfies requirement mgkit==0.4.3 from https://files.pythonhosted.org/packages/1e/6e/9bacfeee743cccc4b7b0504eea4b79a19c5104ea647240b0a1781265efe3/mgkit-0.4.3.tar.gz#sha256=8b4276ffbe3a25bd296cbcba866610fccee1257cf16d69e8e6813dc49c0b4a89 2021-07-16T00:16:55,882 Removed mgkit==0.4.3 from https://files.pythonhosted.org/packages/1e/6e/9bacfeee743cccc4b7b0504eea4b79a19c5104ea647240b0a1781265efe3/mgkit-0.4.3.tar.gz#sha256=8b4276ffbe3a25bd296cbcba866610fccee1257cf16d69e8e6813dc49c0b4a89 from build tracker '/tmp/pip-req-tracker-4wbnw89r' 2021-07-16T00:16:55,886 Created temporary directory: /tmp/pip-unpack-v77ds30w 2021-07-16T00:16:55,887 Building wheels for collected packages: mgkit 2021-07-16T00:16:55,890 Created temporary directory: /tmp/pip-wheel-4aewti2e 2021-07-16T00:16:55,891 Building wheel for mgkit (setup.py): started 2021-07-16T00:16:55,891 Destination directory: /tmp/pip-wheel-4aewti2e 2021-07-16T00:16:55,891 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-94ce_1sl/mgkit_75291bab44ef409297afe2947836c08c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-94ce_1sl/mgkit_75291bab44ef409297afe2947836c08c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-4aewti2e 2021-07-16T00:16:57,015 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-16T00:16:57,016 warnings.warn( 2021-07-16T00:16:57,647 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-16T00:16:57,647 warnings.warn( 2021-07-16T00:16:57,704 running bdist_wheel 2021-07-16T00:16:57,868 running build 2021-07-16T00:16:57,869 running build_py 2021-07-16T00:16:58,028 creating build 2021-07-16T00:16:58,028 creating build/lib.linux-armv7l-3.9 2021-07-16T00:16:58,029 creating build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,031 copying mgkit/align.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,033 copying mgkit/graphs.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,036 copying mgkit/logger.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,038 copying mgkit/simple_cache.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,040 copying mgkit/consts.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,042 copying mgkit/taxon.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,045 copying mgkit/kegg.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,048 copying mgkit/__init__.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,051 creating build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,052 copying mgkit/io/gff.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,056 copying mgkit/io/fasta.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,058 copying mgkit/io/blast.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,060 copying mgkit/io/fastq.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,063 copying mgkit/io/glimmer.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,065 copying mgkit/io/uniprot.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,067 copying mgkit/io/snpdat.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,069 copying mgkit/io/utils.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,072 copying mgkit/io/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-16T00:16:58,074 creating build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,075 copying mgkit/filter/gff.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,078 copying mgkit/filter/reads.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,080 copying mgkit/filter/lists.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,082 copying mgkit/filter/common.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,083 copying mgkit/filter/taxon.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,085 copying mgkit/filter/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-16T00:16:58,088 creating build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,089 copying mgkit/plots/abund.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,091 copying mgkit/plots/unused.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,094 copying mgkit/plots/boxplot.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,096 copying mgkit/plots/heatmap.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,099 copying mgkit/plots/colors.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,101 copying mgkit/plots/utils.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,103 copying mgkit/plots/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-16T00:16:58,105 creating build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,106 copying mgkit/utils/trans_tables.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,108 copying mgkit/utils/common.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,111 copying mgkit/utils/dictionary.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,113 copying mgkit/utils/sequence.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,116 copying mgkit/utils/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,119 creating build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,120 copying mgkit/workflow/filter_gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,123 copying mgkit/workflow/add_gff_info.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,126 copying mgkit/workflow/sampling_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,128 copying mgkit/workflow/json2gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,130 copying mgkit/workflow/extract_gff_info.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,133 copying mgkit/workflow/hmmer2gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,135 copying mgkit/workflow/fastq_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,138 copying mgkit/workflow/taxon_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,140 copying mgkit/workflow/blast2gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,143 copying mgkit/workflow/fasta_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,145 copying mgkit/workflow/snp_parser.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,148 copying mgkit/workflow/utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,150 copying mgkit/workflow/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-16T00:16:58,152 creating build/lib.linux-armv7l-3.9/mgkit/db 2021-07-16T00:16:58,153 copying mgkit/db/mongo.py -> build/lib.linux-armv7l-3.9/mgkit/db 2021-07-16T00:16:58,156 copying mgkit/db/dbm.py -> build/lib.linux-armv7l-3.9/mgkit/db 2021-07-16T00:16:58,157 copying mgkit/db/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/db 2021-07-16T00:16:58,160 creating build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,161 copying mgkit/snps/conv_func.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,163 copying mgkit/snps/funcs.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,166 copying mgkit/snps/mapper.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,168 copying mgkit/snps/filter.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,170 copying mgkit/snps/classes.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,172 copying mgkit/snps/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-16T00:16:58,175 creating build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-16T00:16:58,176 copying mgkit/counts/func.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-16T00:16:58,179 copying mgkit/counts/scaling.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-16T00:16:58,181 copying mgkit/counts/glm.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-16T00:16:58,183 copying mgkit/counts/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-16T00:16:58,186 creating build/lib.linux-armv7l-3.9/mgkit/net 2021-07-16T00:16:58,187 copying mgkit/net/pfam.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-16T00:16:58,189 copying mgkit/net/embl.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-16T00:16:58,191 copying mgkit/net/uniprot.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-16T00:16:58,193 copying mgkit/net/utils.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-16T00:16:58,195 copying mgkit/net/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-16T00:16:58,198 creating build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,199 copying mgkit/mappings/enzyme.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,202 copying mgkit/mappings/pandas_map.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,204 copying mgkit/mappings/taxon.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,206 copying mgkit/mappings/go.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,207 copying mgkit/mappings/eggnog.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,210 copying mgkit/mappings/cazy.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,211 copying mgkit/mappings/utils.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,213 copying mgkit/mappings/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-16T00:16:58,223 running build_ext 2021-07-16T00:16:58,228 building 'mgkit.utils._sequence' extension 2021-07-16T00:16:58,229 creating build/temp.linux-armv7l-3.9 2021-07-16T00:16:58,230 creating build/temp.linux-armv7l-3.9/mgkit 2021-07-16T00:16:58,230 creating build/temp.linux-armv7l-3.9/mgkit/utils 2021-07-16T00:16:58,231 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c mgkit/utils/_sequence.c -o build/temp.linux-armv7l-3.9/mgkit/utils/_sequence.o 2021-07-16T00:16:58,691 mgkit/utils/_sequence.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-16T00:16:58,693 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,694 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,694 | ^ 2021-07-16T00:16:58,695 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,695 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,695 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,695 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,695 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,695 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,699 mgkit/utils/_sequence.c:5143:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,699 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,699 | ^ 2021-07-16T00:16:58,699 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,699 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,699 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,699 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-16T00:16:58,700 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-16T00:16:58,700 | ^~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,703 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,703 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,703 | ^ 2021-07-16T00:16:58,703 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,704 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,704 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,704 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,704 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,704 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,707 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,707 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,708 | ^ 2021-07-16T00:16:58,708 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,708 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,708 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,708 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,708 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,708 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,710 mgkit/utils/_sequence.c:5143:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,710 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,710 | ^ 2021-07-16T00:16:58,711 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,711 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,711 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,711 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-16T00:16:58,711 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-16T00:16:58,711 | ^~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,713 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,713 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,714 | ^ 2021-07-16T00:16:58,714 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,714 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,714 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,714 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,714 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,714 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,717 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,717 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,718 | ^ 2021-07-16T00:16:58,718 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,718 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,718 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,718 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,718 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,718 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,720 mgkit/utils/_sequence.c:5159:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,720 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,721 | ^ 2021-07-16T00:16:58,721 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,721 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,721 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,721 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-16T00:16:58,721 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-16T00:16:58,721 | ^~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,723 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,723 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,724 | ^ 2021-07-16T00:16:58,724 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,724 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,724 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,724 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,724 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,724 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,726 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,727 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,727 | ^ 2021-07-16T00:16:58,727 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,727 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,727 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,727 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,727 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,727 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,729 mgkit/utils/_sequence.c:5159:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,730 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,730 | ^ 2021-07-16T00:16:58,730 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,730 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,730 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,730 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-16T00:16:58,730 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-16T00:16:58,730 | ^~~~~~~~~~~~~~~~~~~ 2021-07-16T00:16:58,732 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-16T00:16:58,733 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-16T00:16:58,733 | ^ 2021-07-16T00:16:58,733 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-16T00:16:58,733 from /usr/include/python3.9/Python.h:97, 2021-07-16T00:16:58,733 from mgkit/utils/_sequence.c:16: 2021-07-16T00:16:58,733 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-16T00:16:58,733 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-16T00:16:58,733 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-16T00:17:05,425 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/mgkit/utils/_sequence.o -o build/lib.linux-armv7l-3.9/mgkit/utils/_sequence.cpython-39-arm-linux-gnueabihf.so 2021-07-16T00:17:05,776 running build_scripts 2021-07-16T00:17:05,776 creating build/scripts-3.9 2021-07-16T00:17:05,779 copying scripts/download-taxonomy.sh -> build/scripts-3.9 2021-07-16T00:17:05,782 copying scripts/download-uniprot-taxa.sh -> build/scripts-3.9 2021-07-16T00:17:05,785 copying scripts/download-ncbi-taxa.sh -> build/scripts-3.9 2021-07-16T00:17:05,787 copying scripts/sort-gff.sh -> build/scripts-3.9 2021-07-16T00:17:05,789 changing mode of build/scripts-3.9/sort-gff.sh from 644 to 755 2021-07-16T00:17:05,798 installing to build/bdist.linux-armv7l/wheel 2021-07-16T00:17:05,798 running install 2021-07-16T00:17:05,800 running install_lib 2021-07-16T00:17:05,804 creating build/bdist.linux-armv7l 2021-07-16T00:17:05,805 creating build/bdist.linux-armv7l/wheel 2021-07-16T00:17:05,807 creating build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,808 copying build/lib.linux-armv7l-3.9/mgkit/align.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,811 copying build/lib.linux-armv7l-3.9/mgkit/graphs.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,815 creating build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,816 copying build/lib.linux-armv7l-3.9/mgkit/io/gff.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,821 copying build/lib.linux-armv7l-3.9/mgkit/io/fasta.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,823 copying build/lib.linux-armv7l-3.9/mgkit/io/blast.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,826 copying build/lib.linux-armv7l-3.9/mgkit/io/fastq.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,828 copying build/lib.linux-armv7l-3.9/mgkit/io/glimmer.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,830 copying build/lib.linux-armv7l-3.9/mgkit/io/uniprot.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,833 copying build/lib.linux-armv7l-3.9/mgkit/io/snpdat.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,835 copying build/lib.linux-armv7l-3.9/mgkit/io/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,837 copying build/lib.linux-armv7l-3.9/mgkit/io/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-16T00:17:05,840 creating build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,841 copying build/lib.linux-armv7l-3.9/mgkit/filter/gff.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,844 copying build/lib.linux-armv7l-3.9/mgkit/filter/reads.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,846 copying build/lib.linux-armv7l-3.9/mgkit/filter/lists.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,848 copying build/lib.linux-armv7l-3.9/mgkit/filter/common.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,850 copying build/lib.linux-armv7l-3.9/mgkit/filter/taxon.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,852 copying build/lib.linux-armv7l-3.9/mgkit/filter/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-16T00:17:05,854 creating build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,855 copying build/lib.linux-armv7l-3.9/mgkit/plots/abund.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,858 copying build/lib.linux-armv7l-3.9/mgkit/plots/unused.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,860 copying build/lib.linux-armv7l-3.9/mgkit/plots/boxplot.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,863 copying build/lib.linux-armv7l-3.9/mgkit/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,866 copying build/lib.linux-armv7l-3.9/mgkit/plots/colors.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,868 copying build/lib.linux-armv7l-3.9/mgkit/plots/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,870 copying build/lib.linux-armv7l-3.9/mgkit/plots/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-16T00:17:05,872 creating build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,873 copying build/lib.linux-armv7l-3.9/mgkit/utils/_sequence.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,885 copying build/lib.linux-armv7l-3.9/mgkit/utils/trans_tables.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,887 copying build/lib.linux-armv7l-3.9/mgkit/utils/common.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,890 copying build/lib.linux-armv7l-3.9/mgkit/utils/dictionary.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,892 copying build/lib.linux-armv7l-3.9/mgkit/utils/sequence.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,895 copying build/lib.linux-armv7l-3.9/mgkit/utils/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-16T00:17:05,898 creating build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,899 copying build/lib.linux-armv7l-3.9/mgkit/workflow/filter_gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,902 copying build/lib.linux-armv7l-3.9/mgkit/workflow/add_gff_info.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,905 copying build/lib.linux-armv7l-3.9/mgkit/workflow/sampling_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,908 copying build/lib.linux-armv7l-3.9/mgkit/workflow/json2gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,910 copying build/lib.linux-armv7l-3.9/mgkit/workflow/extract_gff_info.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,913 copying build/lib.linux-armv7l-3.9/mgkit/workflow/hmmer2gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,916 copying build/lib.linux-armv7l-3.9/mgkit/workflow/fastq_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,918 copying build/lib.linux-armv7l-3.9/mgkit/workflow/taxon_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,921 copying build/lib.linux-armv7l-3.9/mgkit/workflow/blast2gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,924 copying build/lib.linux-armv7l-3.9/mgkit/workflow/fasta_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,926 copying build/lib.linux-armv7l-3.9/mgkit/workflow/snp_parser.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,929 copying build/lib.linux-armv7l-3.9/mgkit/workflow/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,931 copying build/lib.linux-armv7l-3.9/mgkit/workflow/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-16T00:17:05,933 creating build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-16T00:17:05,934 copying build/lib.linux-armv7l-3.9/mgkit/db/mongo.py -> build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-16T00:17:05,937 copying build/lib.linux-armv7l-3.9/mgkit/db/dbm.py -> build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-16T00:17:05,939 copying build/lib.linux-armv7l-3.9/mgkit/db/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-16T00:17:05,941 copying build/lib.linux-armv7l-3.9/mgkit/logger.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,943 copying build/lib.linux-armv7l-3.9/mgkit/simple_cache.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,945 copying build/lib.linux-armv7l-3.9/mgkit/consts.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,947 creating build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,948 copying build/lib.linux-armv7l-3.9/mgkit/snps/conv_func.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,951 copying build/lib.linux-armv7l-3.9/mgkit/snps/funcs.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,953 copying build/lib.linux-armv7l-3.9/mgkit/snps/mapper.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,955 copying build/lib.linux-armv7l-3.9/mgkit/snps/filter.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,957 copying build/lib.linux-armv7l-3.9/mgkit/snps/classes.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,960 copying build/lib.linux-armv7l-3.9/mgkit/snps/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-16T00:17:05,962 creating build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-16T00:17:05,963 copying build/lib.linux-armv7l-3.9/mgkit/counts/func.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-16T00:17:05,966 copying build/lib.linux-armv7l-3.9/mgkit/counts/scaling.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-16T00:17:05,968 copying build/lib.linux-armv7l-3.9/mgkit/counts/glm.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-16T00:17:05,971 copying build/lib.linux-armv7l-3.9/mgkit/counts/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-16T00:17:05,973 copying build/lib.linux-armv7l-3.9/mgkit/taxon.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,977 creating build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-16T00:17:05,978 copying build/lib.linux-armv7l-3.9/mgkit/net/pfam.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-16T00:17:05,980 copying build/lib.linux-armv7l-3.9/mgkit/net/embl.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-16T00:17:05,983 copying build/lib.linux-armv7l-3.9/mgkit/net/uniprot.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-16T00:17:05,985 copying build/lib.linux-armv7l-3.9/mgkit/net/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-16T00:17:05,987 copying build/lib.linux-armv7l-3.9/mgkit/net/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-16T00:17:05,989 copying build/lib.linux-armv7l-3.9/mgkit/kegg.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:05,993 creating build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:05,994 copying build/lib.linux-armv7l-3.9/mgkit/mappings/enzyme.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:05,997 copying build/lib.linux-armv7l-3.9/mgkit/mappings/pandas_map.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:05,999 copying build/lib.linux-armv7l-3.9/mgkit/mappings/taxon.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:06,001 copying build/lib.linux-armv7l-3.9/mgkit/mappings/go.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:06,003 copying build/lib.linux-armv7l-3.9/mgkit/mappings/eggnog.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:06,005 copying build/lib.linux-armv7l-3.9/mgkit/mappings/cazy.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:06,007 copying build/lib.linux-armv7l-3.9/mgkit/mappings/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:06,009 copying build/lib.linux-armv7l-3.9/mgkit/mappings/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-16T00:17:06,011 copying build/lib.linux-armv7l-3.9/mgkit/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-16T00:17:06,013 running install_egg_info 2021-07-16T00:17:06,024 running egg_info 2021-07-16T00:17:06,026 writing mgkit.egg-info/PKG-INFO 2021-07-16T00:17:06,028 writing dependency_links to mgkit.egg-info/dependency_links.txt 2021-07-16T00:17:06,030 writing entry points to mgkit.egg-info/entry_points.txt 2021-07-16T00:17:06,031 writing requirements to mgkit.egg-info/requires.txt 2021-07-16T00:17:06,033 writing top-level names to mgkit.egg-info/top_level.txt 2021-07-16T00:17:06,077 reading manifest file 'mgkit.egg-info/SOURCES.txt' 2021-07-16T00:17:06,106 reading manifest template 'MANIFEST.in' 2021-07-16T00:17:06,161 warning: no previously-included files matching '*' found under directory 'docs/build' 2021-07-16T00:17:06,196 warning: no previously-included files matching '*' found under directory 'tests/mg_data' 2021-07-16T00:17:06,198 warning: no previously-included files matching '*.gz' found under directory 'docs/source/examples/db' 2021-07-16T00:17:06,199 warning: no previously-included files matching 'asse*' found under directory 'docs/source/examples/db' 2021-07-16T00:17:06,200 warning: no previously-included files matching 'gff-dbm' found under directory 'docs/source/examples/db' 2021-07-16T00:17:06,202 warning: no previously-included files matching '.DS_Store' found under directory 'docs' 2021-07-16T00:17:06,203 warning: no previously-included files matching '__MACOSX' found under directory '.' 2021-07-16T00:17:06,205 warning: no previously-included files matching 'tutorial-*data*' found under directory 'docs/source/pipeline/' 2021-07-16T00:17:06,218 writing manifest file 'mgkit.egg-info/SOURCES.txt' 2021-07-16T00:17:06,220 Copying mgkit.egg-info to build/bdist.linux-armv7l/wheel/mgkit-0.4.3-py3.9.egg-info 2021-07-16T00:17:06,233 running install_scripts 2021-07-16T00:17:06,286 creating build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data 2021-07-16T00:17:06,286 creating build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts 2021-07-16T00:17:06,288 copying build/scripts-3.9/download-taxonomy.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts 2021-07-16T00:17:06,290 copying build/scripts-3.9/sort-gff.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts 2021-07-16T00:17:06,292 copying build/scripts-3.9/download-ncbi-taxa.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts 2021-07-16T00:17:06,294 copying build/scripts-3.9/download-uniprot-taxa.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts 2021-07-16T00:17:06,296 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts/download-taxonomy.sh to 755 2021-07-16T00:17:06,296 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts/sort-gff.sh to 755 2021-07-16T00:17:06,297 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts/download-ncbi-taxa.sh to 755 2021-07-16T00:17:06,297 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.4.3.data/scripts/download-uniprot-taxa.sh to 755 2021-07-16T00:17:06,340 creating build/bdist.linux-armv7l/wheel/mgkit-0.4.3.dist-info/WHEEL 2021-07-16T00:17:06,343 creating '/tmp/pip-wheel-4aewti2e/mgkit-0.4.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-16T00:17:06,346 adding 'mgkit/__init__.py' 2021-07-16T00:17:06,349 adding 'mgkit/align.py' 2021-07-16T00:17:06,351 adding 'mgkit/consts.py' 2021-07-16T00:17:06,354 adding 'mgkit/graphs.py' 2021-07-16T00:17:06,358 adding 'mgkit/kegg.py' 2021-07-16T00:17:06,360 adding 'mgkit/logger.py' 2021-07-16T00:17:06,361 adding 'mgkit/simple_cache.py' 2021-07-16T00:17:06,367 adding 'mgkit/taxon.py' 2021-07-16T00:17:06,369 adding 'mgkit/counts/__init__.py' 2021-07-16T00:17:06,372 adding 'mgkit/counts/func.py' 2021-07-16T00:17:06,374 adding 'mgkit/counts/glm.py' 2021-07-16T00:17:06,376 adding 'mgkit/counts/scaling.py' 2021-07-16T00:17:06,378 adding 'mgkit/db/__init__.py' 2021-07-16T00:17:06,379 adding 'mgkit/db/dbm.py' 2021-07-16T00:17:06,381 adding 'mgkit/db/mongo.py' 2021-07-16T00:17:06,383 adding 'mgkit/filter/__init__.py' 2021-07-16T00:17:06,385 adding 'mgkit/filter/common.py' 2021-07-16T00:17:06,386 adding 'mgkit/filter/gff.py' 2021-07-16T00:17:06,388 adding 'mgkit/filter/lists.py' 2021-07-16T00:17:06,389 adding 'mgkit/filter/reads.py' 2021-07-16T00:17:06,391 adding 'mgkit/filter/taxon.py' 2021-07-16T00:17:06,393 adding 'mgkit/io/__init__.py' 2021-07-16T00:17:06,395 adding 'mgkit/io/blast.py' 2021-07-16T00:17:06,397 adding 'mgkit/io/fasta.py' 2021-07-16T00:17:06,399 adding 'mgkit/io/fastq.py' 2021-07-16T00:17:06,408 adding 'mgkit/io/gff.py' 2021-07-16T00:17:06,410 adding 'mgkit/io/glimmer.py' 2021-07-16T00:17:06,412 adding 'mgkit/io/snpdat.py' 2021-07-16T00:17:06,413 adding 'mgkit/io/uniprot.py' 2021-07-16T00:17:06,415 adding 'mgkit/io/utils.py' 2021-07-16T00:17:06,417 adding 'mgkit/mappings/__init__.py' 2021-07-16T00:17:06,418 adding 'mgkit/mappings/cazy.py' 2021-07-16T00:17:06,420 adding 'mgkit/mappings/eggnog.py' 2021-07-16T00:17:06,422 adding 'mgkit/mappings/enzyme.py' 2021-07-16T00:17:06,424 adding 'mgkit/mappings/go.py' 2021-07-16T00:17:06,425 adding 'mgkit/mappings/pandas_map.py' 2021-07-16T00:17:06,427 adding 'mgkit/mappings/taxon.py' 2021-07-16T00:17:06,428 adding 'mgkit/mappings/utils.py' 2021-07-16T00:17:06,430 adding 'mgkit/net/__init__.py' 2021-07-16T00:17:06,432 adding 'mgkit/net/embl.py' 2021-07-16T00:17:06,434 adding 'mgkit/net/pfam.py' 2021-07-16T00:17:06,436 adding 'mgkit/net/uniprot.py' 2021-07-16T00:17:06,438 adding 'mgkit/net/utils.py' 2021-07-16T00:17:06,440 adding 'mgkit/plots/__init__.py' 2021-07-16T00:17:06,442 adding 'mgkit/plots/abund.py' 2021-07-16T00:17:06,444 adding 'mgkit/plots/boxplot.py' 2021-07-16T00:17:06,446 adding 'mgkit/plots/colors.py' 2021-07-16T00:17:06,448 adding 'mgkit/plots/heatmap.py' 2021-07-16T00:17:06,450 adding 'mgkit/plots/unused.py' 2021-07-16T00:17:06,451 adding 'mgkit/plots/utils.py' 2021-07-16T00:17:06,453 adding 'mgkit/snps/__init__.py' 2021-07-16T00:17:06,455 adding 'mgkit/snps/classes.py' 2021-07-16T00:17:06,457 adding 'mgkit/snps/conv_func.py' 2021-07-16T00:17:06,459 adding 'mgkit/snps/filter.py' 2021-07-16T00:17:06,461 adding 'mgkit/snps/funcs.py' 2021-07-16T00:17:06,463 adding 'mgkit/snps/mapper.py' 2021-07-16T00:17:06,465 adding 'mgkit/utils/__init__.py' 2021-07-16T00:17:06,561 adding 'mgkit/utils/_sequence.cpython-39-arm-linux-gnueabihf.so' 2021-07-16T00:17:06,567 adding 'mgkit/utils/common.py' 2021-07-16T00:17:06,569 adding 'mgkit/utils/dictionary.py' 2021-07-16T00:17:06,573 adding 'mgkit/utils/sequence.py' 2021-07-16T00:17:06,576 adding 'mgkit/utils/trans_tables.py' 2021-07-16T00:17:06,578 adding 'mgkit/workflow/__init__.py' 2021-07-16T00:17:06,583 adding 'mgkit/workflow/add_gff_info.py' 2021-07-16T00:17:06,586 adding 'mgkit/workflow/blast2gff.py' 2021-07-16T00:17:06,588 adding 'mgkit/workflow/extract_gff_info.py' 2021-07-16T00:17:06,590 adding 'mgkit/workflow/fasta_utils.py' 2021-07-16T00:17:06,593 adding 'mgkit/workflow/fastq_utils.py' 2021-07-16T00:17:06,596 adding 'mgkit/workflow/filter_gff.py' 2021-07-16T00:17:06,598 adding 'mgkit/workflow/hmmer2gff.py' 2021-07-16T00:17:06,600 adding 'mgkit/workflow/json2gff.py' 2021-07-16T00:17:06,602 adding 'mgkit/workflow/sampling_utils.py' 2021-07-16T00:17:06,604 adding 'mgkit/workflow/snp_parser.py' 2021-07-16T00:17:06,608 adding 'mgkit/workflow/taxon_utils.py' 2021-07-16T00:17:06,610 adding 'mgkit/workflow/utils.py' 2021-07-16T00:17:06,613 adding 'mgkit-0.4.3.data/scripts/download-ncbi-taxa.sh' 2021-07-16T00:17:06,614 adding 'mgkit-0.4.3.data/scripts/download-taxonomy.sh' 2021-07-16T00:17:06,616 adding 'mgkit-0.4.3.data/scripts/download-uniprot-taxa.sh' 2021-07-16T00:17:06,617 adding 'mgkit-0.4.3.data/scripts/sort-gff.sh' 2021-07-16T00:17:06,623 adding 'mgkit-0.4.3.dist-info/METADATA' 2021-07-16T00:17:06,626 adding 'mgkit-0.4.3.dist-info/WHEEL' 2021-07-16T00:17:06,628 adding 'mgkit-0.4.3.dist-info/entry_points.txt' 2021-07-16T00:17:06,632 adding 'mgkit-0.4.3.dist-info/top_level.txt' 2021-07-16T00:17:06,634 adding 'mgkit-0.4.3.dist-info/RECORD' 2021-07-16T00:17:06,643 removing build/bdist.linux-armv7l/wheel 2021-07-16T00:17:06,765 Building wheel for mgkit (setup.py): finished with status 'done' 2021-07-16T00:17:06,771 Created wheel for mgkit: filename=mgkit-0.4.3-cp39-cp39-linux_armv7l.whl size=354344 sha256=14859afb3e980114c1147bcfab0ddd157e15f92a76a18f6d6f295db93186a1db 2021-07-16T00:17:06,772 Stored in directory: /tmp/pip-ephem-wheel-cache-bx5i7nd8/wheels/4f/62/f1/3aa38e547dc8bc24c3e998252bc7f6d911fb24f8382e38570f 2021-07-16T00:17:06,783 Successfully built mgkit 2021-07-16T00:17:06,798 Removed build tracker: '/tmp/pip-req-tracker-4wbnw89r'