2021-07-16T05:14:25,931 Created temporary directory: /tmp/pip-ephem-wheel-cache-qnhpz5xw
2021-07-16T05:14:25,935 Created temporary directory: /tmp/pip-req-tracker-5p3ocdm5
2021-07-16T05:14:25,935 Initialized build tracking at /tmp/pip-req-tracker-5p3ocdm5
2021-07-16T05:14:25,936 Created build tracker: /tmp/pip-req-tracker-5p3ocdm5
2021-07-16T05:14:25,936 Entered build tracker: /tmp/pip-req-tracker-5p3ocdm5
2021-07-16T05:14:25,948 Created temporary directory: /tmp/pip-wheel-czs_q0l2
2021-07-16T05:14:26,022 1 location(s) to search for versions of pyssa:
2021-07-16T05:14:26,022 * https://pypi.org/simple/pyssa/
2021-07-16T05:14:26,023 Fetching project page and analyzing links: https://pypi.org/simple/pyssa/
2021-07-16T05:14:26,024 Getting page https://pypi.org/simple/pyssa/
2021-07-16T05:14:26,027 Found index url https://pypi.org/simple
2021-07-16T05:14:26,212   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/33/43/4d28b4ce5a85131b22bedd9886a8e790abee71c3f8f83367df09012e9d76/pyssa-0.1.0-py3.6-win-amd64.egg#sha256=5ed390509472d2dca456466d2f8532bfbde63193ba0342bd87f8b5504a1559b4 (from https://pypi.org/simple/pyssa/)
2021-07-16T05:14:26,213   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2d/7e/aad4420b1bceab821ecad275c1df0d7900fb80a53dee74b3cdafa3a0a8c2/pyssa-0.1.0-py3.6.egg#sha256=6920fc4955b2f2dcd94f01e5ba01ff8335b638ae04ac1da772029d625f78f21f (from https://pypi.org/simple/pyssa/)
2021-07-16T05:14:26,243   Found link https://files.pythonhosted.org/packages/fb/f4/ad0c19149ae81e0eec49e4cedde0954ed5ade38533b271f0e73b2c82b1c3/pyssa-0.5.4-py2.py3-none-any.whl#sha256=0b42bd27a63cdfa1f011680624090d30aab0381b3efa2b66c8f41c270c85d102 (from https://pypi.org/simple/pyssa/), version: 0.5.4
2021-07-16T05:14:26,244   Found link https://files.pythonhosted.org/packages/0e/78/ac806a65ea35095f214f4589315583a1df1b9cd24da667d50969c40a6de7/pyssa-0.5.4.tar.gz#sha256=bc35deac1fdb638f185040517a917fa89643a300ee6e62c9fbd038ef6bc64877 (from https://pypi.org/simple/pyssa/), version: 0.5.4
2021-07-16T05:14:26,245   Found link https://files.pythonhosted.org/packages/29/af/874de26f959f8cf87ca1002cff22b8352dc11b74d738cf7acc5a89e89994/pyssa-0.6.0.tar.gz#sha256=4e4d19db4d48f645616a40afbcc4be23ca95c0436a0a9a9d200c123c958bcf95 (from https://pypi.org/simple/pyssa/), version: 0.6.0
2021-07-16T05:14:26,245   Found link https://files.pythonhosted.org/packages/42/cc/5b6773993b98d146c6929aeb2131d966f452c4186031bd71ed6682944f23/pyssa-0.7.0.tar.gz#sha256=350bc31226a9b94d83de57b86a1762a9177a718f115f9c9f4c67a551c4f8582e (from https://pypi.org/simple/pyssa/), version: 0.7.0
2021-07-16T05:14:26,246   Found link https://files.pythonhosted.org/packages/5d/3d/fab7d8c46b52f085af7426c1a62b5234a8011b37edc821b7b1bba3cee408/pyssa-0.7.1.tar.gz#sha256=f7fcbeb6e10a6dfb64d11238e60e5a92895ea0671d77d6678938bbbb8dce2a73 (from https://pypi.org/simple/pyssa/), version: 0.7.1
2021-07-16T05:14:26,247   Found link https://files.pythonhosted.org/packages/82/09/7b74daede528a256545a1a227bc83b8030fe0b966033ba9482f16488cb13/pyssa-0.8.0.tar.gz#sha256=5b27b379e8c87a66971132c334795f7683cdbc887dc65025a36035d87c3b159c (from https://pypi.org/simple/pyssa/), version: 0.8.0
2021-07-16T05:14:26,248   Found link https://files.pythonhosted.org/packages/49/b5/b221dcecf3838186c81d833d8ea760d073ef92d9347109e018508b2ba1f1/pyssa-0.8.1.tar.gz#sha256=e6bbeb35b213a3fd7046adea46011019be3aad8f122e6fd34ec0e79c644ab9c9 (from https://pypi.org/simple/pyssa/), version: 0.8.1
2021-07-16T05:14:26,249   Found link https://files.pythonhosted.org/packages/91/d2/35604e2fc272e7d2e6fc074f0ca44dcd5fa8b9918bcc5e17db24316785e7/pyssa-0.8.2.tar.gz#sha256=9c628cac789c92dede8ba6f6285dd7154d0b233fc7288f0be20cd555fe2df592 (from https://pypi.org/simple/pyssa/), version: 0.8.2
2021-07-16T05:14:26,249   Found link https://files.pythonhosted.org/packages/6c/df/71a6c566523508320be4aa43507765e421bd37e46a8d9733aa14fc39bfb0/pyssa-0.9.0.tar.gz#sha256=2a7708943564740b8a74576cfd6a25fad07338c0226432d0d7498531367627a8 (from https://pypi.org/simple/pyssa/), version: 0.9.0
2021-07-16T05:14:26,250   Found link https://files.pythonhosted.org/packages/4d/e0/9df44bb59f91db0308ade3fd8d1f10ba0bee56bd158c76dbebd541f3d4a0/pyssa-0.9.1.tar.gz#sha256=abc7af012110ac372bb503480a23ea36e56ef949de1a85d9f6ce0ff2868f9de9 (from https://pypi.org/simple/pyssa/), version: 0.9.1
2021-07-16T05:14:26,251 Skipping link: not a file: https://pypi.org/simple/pyssa/
2021-07-16T05:14:26,254 Given no hashes to check 1 links for project 'pyssa': discarding no candidates
2021-07-16T05:14:26,294 Collecting pyssa==0.9.1
2021-07-16T05:14:26,297   Created temporary directory: /tmp/pip-unpack-wd4w1pqv
2021-07-16T05:14:26,983   Downloading pyssa-0.9.1.tar.gz (783 kB)
2021-07-16T05:14:28,310   Added pyssa==0.9.1 from https://files.pythonhosted.org/packages/4d/e0/9df44bb59f91db0308ade3fd8d1f10ba0bee56bd158c76dbebd541f3d4a0/pyssa-0.9.1.tar.gz#sha256=abc7af012110ac372bb503480a23ea36e56ef949de1a85d9f6ce0ff2868f9de9 to build tracker '/tmp/pip-req-tracker-5p3ocdm5'
2021-07-16T05:14:28,312     Running setup.py (path:/tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/setup.py) egg_info for package pyssa
2021-07-16T05:14:28,313     Created temporary directory: /tmp/pip-pip-egg-info-aahr0469
2021-07-16T05:14:28,313     Running command python setup.py egg_info
2021-07-16T05:14:35,101     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/pyssa/algorithms/direct.pyx
2021-07-16T05:14:35,102       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-16T05:14:51,659     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/pyssa/algorithms/tau_adaptive.pyx
2021-07-16T05:14:51,659       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-16T05:15:01,667     warning: pyssa/algorithms/tau_adaptive.pyx:118:20: Index should be typed for more efficient access
2021-07-16T05:15:09,335     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/pyssa/algorithms/tau_leaping.pyx
2021-07-16T05:15:09,335       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-16T05:15:26,382     /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/pyssa/utils.pxd
2021-07-16T05:15:26,382       tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-16T05:15:43,642     Compiling pyssa/algorithms/direct.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-16T05:15:43,643     Compiling pyssa/algorithms/tau_leaping.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-16T05:15:43,644     Compiling pyssa/algorithms/tau_adaptive.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-16T05:15:43,644     Compiling pyssa/utils.pyx because it depends on /home/piwheels/.local/lib/python3.9/site-packages/numpy/__init__.pxd.
2021-07-16T05:15:43,644     [1/4] Cythonizing pyssa/algorithms/direct.pyx
2021-07-16T05:15:43,645     [2/4] Cythonizing pyssa/algorithms/tau_adaptive.pyx
2021-07-16T05:15:43,645     [3/4] Cythonizing pyssa/algorithms/tau_leaping.pyx
2021-07-16T05:15:43,646     [4/4] Cythonizing pyssa/utils.pyx
2021-07-16T05:15:44,380     running egg_info
2021-07-16T05:15:44,400     creating /tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info
2021-07-16T05:15:44,402     writing /tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/PKG-INFO
2021-07-16T05:15:44,406     writing dependency_links to /tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/dependency_links.txt
2021-07-16T05:15:44,412     writing requirements to /tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/requires.txt
2021-07-16T05:15:44,414     writing top-level names to /tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/top_level.txt
2021-07-16T05:15:44,417     writing manifest file '/tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/SOURCES.txt'
2021-07-16T05:15:44,849     reading manifest file '/tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/SOURCES.txt'
2021-07-16T05:15:44,853     reading manifest template 'MANIFEST.in'
2021-07-16T05:15:44,857     warning: no files found matching 'README.rst'
2021-07-16T05:15:44,895     warning: no previously-included files matching '__pycache__' found under directory '*'
2021-07-16T05:15:44,899     warning: no previously-included files matching '*.py[co]' found under directory '*'
2021-07-16T05:15:45,016     warning: no files found matching '*.jpg' under directory 'docs'
2021-07-16T05:15:45,056     warning: no files found matching '*.gif' under directory 'docs'
2021-07-16T05:15:45,104     adding license file 'LICENSE'
2021-07-16T05:15:45,104     adding license file 'AUTHORS.rst'
2021-07-16T05:15:45,109     writing manifest file '/tmp/pip-pip-egg-info-aahr0469/pyssa.egg-info/SOURCES.txt'
2021-07-16T05:15:46,155   Source in /tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb has version 0.9.1, which satisfies requirement pyssa==0.9.1 from https://files.pythonhosted.org/packages/4d/e0/9df44bb59f91db0308ade3fd8d1f10ba0bee56bd158c76dbebd541f3d4a0/pyssa-0.9.1.tar.gz#sha256=abc7af012110ac372bb503480a23ea36e56ef949de1a85d9f6ce0ff2868f9de9
2021-07-16T05:15:46,156   Removed pyssa==0.9.1 from https://files.pythonhosted.org/packages/4d/e0/9df44bb59f91db0308ade3fd8d1f10ba0bee56bd158c76dbebd541f3d4a0/pyssa-0.9.1.tar.gz#sha256=abc7af012110ac372bb503480a23ea36e56ef949de1a85d9f6ce0ff2868f9de9 from build tracker '/tmp/pip-req-tracker-5p3ocdm5'
2021-07-16T05:15:46,165 Created temporary directory: /tmp/pip-unpack-6bx3ug56
2021-07-16T05:15:46,166 Building wheels for collected packages: pyssa
2021-07-16T05:15:46,172   Created temporary directory: /tmp/pip-wheel-o8qljjez
2021-07-16T05:15:46,173   Building wheel for pyssa (setup.py): started
2021-07-16T05:15:46,174   Destination directory: /tmp/pip-wheel-o8qljjez
2021-07-16T05:15:46,175   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-czs_q0l2/pyssa_cec30927f91b4a0da3d3c18acc7a87cb/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-o8qljjez
2021-07-16T05:15:52,407   running bdist_wheel
2021-07-16T05:15:52,419   running build
2021-07-16T05:15:52,419   running build_py
2021-07-16T05:15:52,762   creating build
2021-07-16T05:15:52,763   creating build/lib.linux-armv7l-3.9
2021-07-16T05:15:52,764   creating build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:52,766   copying pyssa/__init__.py -> build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:52,769   copying pyssa/results.py -> build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:52,772   copying pyssa/simulation.py -> build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:52,777   creating build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:52,778   copying pyssa/algorithms/__init__.py -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:52,781   running egg_info
2021-07-16T05:15:52,808   writing pyssa.egg-info/PKG-INFO
2021-07-16T05:15:52,811   writing dependency_links to pyssa.egg-info/dependency_links.txt
2021-07-16T05:15:52,814   writing requirements to pyssa.egg-info/requires.txt
2021-07-16T05:15:52,816   writing top-level names to pyssa.egg-info/top_level.txt
2021-07-16T05:15:52,881   reading manifest file 'pyssa.egg-info/SOURCES.txt'
2021-07-16T05:15:52,895   reading manifest template 'MANIFEST.in'
2021-07-16T05:15:52,897   warning: no files found matching 'README.rst'
2021-07-16T05:15:52,917   warning: no previously-included files matching '__pycache__' found under directory '*'
2021-07-16T05:15:52,918   warning: no previously-included files matching '*.py[co]' found under directory '*'
2021-07-16T05:15:52,976   warning: no files found matching '*.jpg' under directory 'docs'
2021-07-16T05:15:53,017   warning: no files found matching '*.gif' under directory 'docs'
2021-07-16T05:15:53,045   adding license file 'LICENSE'
2021-07-16T05:15:53,046   adding license file 'AUTHORS.rst'
2021-07-16T05:15:53,054   writing manifest file 'pyssa.egg-info/SOURCES.txt'
2021-07-16T05:15:53,061   copying pyssa/utils.c -> build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:53,106   copying pyssa/utils.pxd -> build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:53,109   copying pyssa/utils.pyx -> build/lib.linux-armv7l-3.9/pyssa
2021-07-16T05:15:53,112   copying pyssa/algorithms/direct.c -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,148   copying pyssa/algorithms/direct.pyx -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,151   copying pyssa/algorithms/tau_adaptive.c -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,200   copying pyssa/algorithms/tau_adaptive.pyx -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,203   copying pyssa/algorithms/tau_leaping.c -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,258   copying pyssa/algorithms/tau_leaping.pyx -> build/lib.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,264   running build_ext
2021-07-16T05:15:53,271   building 'pyssa.algorithms.direct' extension
2021-07-16T05:15:53,272   creating build/temp.linux-armv7l-3.9
2021-07-16T05:15:53,273   creating build/temp.linux-armv7l-3.9/pyssa
2021-07-16T05:15:53,274   creating build/temp.linux-armv7l-3.9/pyssa/algorithms
2021-07-16T05:15:53,275   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/algorithms/direct.c -o build/temp.linux-armv7l-3.9/pyssa/algorithms/direct.o
2021-07-16T05:15:54,043   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-16T05:15:54,044                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-16T05:15:54,044                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-16T05:15:54,045                    from pyssa/algorithms/direct.c:640:
2021-07-16T05:15:54,045   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-16T05:15:54,045      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-16T05:15:54,046         |  ^~~~~~~
2021-07-16T05:15:56,821   pyssa/algorithms/direct.c:14480:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,822   14480 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-16T05:15:56,822         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,831   pyssa/algorithms/direct.c:14422:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,831   14422 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:15:56,832         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,839   pyssa/algorithms/direct.c:11577:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,839   11577 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-16T05:15:56,840         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,847   pyssa/algorithms/direct.c:11519:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,847   11519 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:15:56,848         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,855   pyssa/algorithms/direct.c:11425:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,855   11425 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-16T05:15:56,855         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,862   pyssa/algorithms/direct.c:11330:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,863   11330 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-16T05:15:56,863         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,870   pyssa/algorithms/direct.c:11253:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,870   11253 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-16T05:15:56,871         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,878   pyssa/algorithms/direct.c:11176:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,878   11176 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-16T05:15:56,878         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,883   pyssa/algorithms/direct.c:7303:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,883    7303 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-16T05:15:56,884         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,888   pyssa/algorithms/direct.c:7067:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,888    7067 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:15:56,889         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,893   pyssa/algorithms/direct.c:6689:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,893    6689 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-16T05:15:56,894         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:15:56,898   pyssa/algorithms/direct.c:6631:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:15:56,898    6631 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:15:56,898         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:26,921   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/algorithms/direct.o -o build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.cpython-39-arm-linux-gnueabihf.so
2021-07-16T05:16:27,244   building 'pyssa.algorithms.tau_leaping' extension
2021-07-16T05:16:27,245   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/algorithms/tau_leaping.c -o build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.o
2021-07-16T05:16:28,239   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-16T05:16:28,240                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-16T05:16:28,240                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-16T05:16:28,241                    from pyssa/algorithms/tau_leaping.c:640:
2021-07-16T05:16:28,241   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-16T05:16:28,241      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-16T05:16:28,242         |  ^~~~~~~
2021-07-16T05:16:31,384   pyssa/algorithms/tau_leaping.c:14568:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,384   14568 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-16T05:16:31,384         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,393   pyssa/algorithms/tau_leaping.c:14510:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,394   14510 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:16:31,394         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,450   pyssa/algorithms/tau_leaping.c:11665:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,451   11665 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-16T05:16:31,451         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,475   pyssa/algorithms/tau_leaping.c:11607:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,475   11607 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:16:31,475         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,483   pyssa/algorithms/tau_leaping.c:11513:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,483   11513 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-16T05:16:31,483         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,500   pyssa/algorithms/tau_leaping.c:11418:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,501   11418 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-16T05:16:31,501         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,518   pyssa/algorithms/tau_leaping.c:11341:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,519   11341 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-16T05:16:31,519         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,526   pyssa/algorithms/tau_leaping.c:11264:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,526   11264 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-16T05:16:31,527         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,531   pyssa/algorithms/tau_leaping.c:7391:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,532    7391 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-16T05:16:31,532         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,542   pyssa/algorithms/tau_leaping.c:7155:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,543    7155 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:16:31,543         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,562   pyssa/algorithms/tau_leaping.c:6777:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,562    6777 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-16T05:16:31,563         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:16:31,567   pyssa/algorithms/tau_leaping.c:6719:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:16:31,568    6719 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:16:31,568         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:02,502   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.o -o build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.cpython-39-arm-linux-gnueabihf.so
2021-07-16T05:17:02,942   building 'pyssa.algorithms.tau_adaptive' extension
2021-07-16T05:17:02,942   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/algorithms/tau_adaptive.c -o build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.o
2021-07-16T05:17:03,562   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-16T05:17:03,563                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-16T05:17:03,563                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-16T05:17:03,563                    from pyssa/algorithms/tau_adaptive.c:640:
2021-07-16T05:17:03,564   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-16T05:17:03,564      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-16T05:17:03,564         |  ^~~~~~~
2021-07-16T05:17:06,273   pyssa/algorithms/tau_adaptive.c:19810:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,274   19810 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-16T05:17:06,274         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,285   pyssa/algorithms/tau_adaptive.c:19752:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,286   19752 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:17:06,286         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,296   pyssa/algorithms/tau_adaptive.c:16907:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,296   16907 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-16T05:17:06,297         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,307   pyssa/algorithms/tau_adaptive.c:16849:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,307   16849 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:17:06,307         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,317   pyssa/algorithms/tau_adaptive.c:16755:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,318   16755 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-16T05:17:06,318         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,327   pyssa/algorithms/tau_adaptive.c:16660:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,328   16660 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-16T05:17:06,328         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,337   pyssa/algorithms/tau_adaptive.c:16583:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,338   16583 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-16T05:17:06,338         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,348   pyssa/algorithms/tau_adaptive.c:16506:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,348   16506 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-16T05:17:06,349         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,356   pyssa/algorithms/tau_adaptive.c:12633:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,356   12633 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-16T05:17:06,357         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,363   pyssa/algorithms/tau_adaptive.c:12397:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,364   12397 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:17:06,364         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,371   pyssa/algorithms/tau_adaptive.c:12019:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,371   12019 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-16T05:17:06,372         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:06,379   pyssa/algorithms/tau_adaptive.c:11961:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:17:06,380   11961 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:17:06,380         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:17:15,718   pyssa/algorithms/tau_adaptive.c: In function ‘__pyx_f_5pyssa_10algorithms_12tau_adaptive_step2_get_g’:
2021-07-16T05:17:15,721   pyssa/algorithms/tau_adaptive.c:4258:15: warning: ‘__pyx_v_g’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2021-07-16T05:17:15,721    4258 |   __pyx_t_5 = PyFloat_FromDouble(__pyx_v_g); if (unlikely(!__pyx_t_5)) __PYX_ERR(0, 92, __pyx_L1_error)
2021-07-16T05:17:15,722         |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:07,315   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.o -o build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.cpython-39-arm-linux-gnueabihf.so
2021-07-16T05:18:07,764   building 'pyssa.utils' extension
2021-07-16T05:18:07,764   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_TRACE=1 -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c pyssa/utils.c -o build/temp.linux-armv7l-3.9/pyssa/utils.o
2021-07-16T05:18:08,852   In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-16T05:18:08,853                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-16T05:18:08,853                    from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-16T05:18:08,854                    from pyssa/utils.c:640:
2021-07-16T05:18:08,854   /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-16T05:18:08,854      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-16T05:18:08,855         |  ^~~~~~~
2021-07-16T05:18:12,178   pyssa/utils.c:14190:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,179   14190 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0};
2021-07-16T05:18:12,179         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,186   pyssa/utils.c:14132:20: warning: ‘__pyx_mdef___pyx_memoryviewslice_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,187   14132 | static PyMethodDef __pyx_mdef___pyx_memoryviewslice_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:18:12,187         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,206   pyssa/utils.c:11287:20: warning: ‘__pyx_mdef___pyx_memoryview_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,206   11287 | static PyMethodDef __pyx_mdef___pyx_memoryview_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0};
2021-07-16T05:18:12,207         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,212   pyssa/utils.c:11229:20: warning: ‘__pyx_mdef___pyx_memoryview_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,213   11229 | static PyMethodDef __pyx_mdef___pyx_memoryview_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:18:12,213         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,225   pyssa/utils.c:11135:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,226   11135 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_23copy_fortran = {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0};
2021-07-16T05:18:12,226         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,238   pyssa/utils.c:11040:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_21copy’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,238   11040 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_21copy = {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0};
2021-07-16T05:18:12,239         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,244   pyssa/utils.c:10963:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,245   10963 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_19is_f_contig = {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0};
2021-07-16T05:18:12,245         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,263   pyssa/utils.c:10886:20: warning: ‘__pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,264   10886 | static PyMethodDef __pyx_mdef_15View_dot_MemoryView_10memoryview_17is_c_contig = {"is_c_contig", (PyCFunction)__pyx_memoryview_is_c_contig, METH_NOARGS, 0};
2021-07-16T05:18:12,264         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,267   pyssa/utils.c:7013:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,268    7013 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0};
2021-07-16T05:18:12,268         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,271   pyssa/utils.c:6777:20: warning: ‘__pyx_mdef___pyx_MemviewEnum_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,271    6777 | static PyMethodDef __pyx_mdef___pyx_MemviewEnum_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:18:12,272         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,275   pyssa/utils.c:6399:20: warning: ‘__pyx_mdef___pyx_array_3__setstate_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,275    6399 | static PyMethodDef __pyx_mdef___pyx_array_3__setstate_cython__ = {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0};
2021-07-16T05:18:12,275         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:12,278   pyssa/utils.c:6341:20: warning: ‘__pyx_mdef___pyx_array_1__reduce_cython__’ defined but not used [-Wunused-variable]
2021-07-16T05:18:12,279    6341 | static PyMethodDef __pyx_mdef___pyx_array_1__reduce_cython__ = {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0};
2021-07-16T05:18:12,279         |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-16T05:18:36,504   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pyssa/utils.o -o build/lib.linux-armv7l-3.9/pyssa/utils.cpython-39-arm-linux-gnueabihf.so
2021-07-16T05:18:36,982   installing to build/bdist.linux-armv7l/wheel
2021-07-16T05:18:36,983   running install
2021-07-16T05:18:36,986   running install_lib
2021-07-16T05:18:37,003   creating build/bdist.linux-armv7l
2021-07-16T05:18:37,003   creating build/bdist.linux-armv7l/wheel
2021-07-16T05:18:37,006   creating build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,008   copying build/lib.linux-armv7l-3.9/pyssa/utils.pyx -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,012   creating build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,019   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.c -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,070   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.pyx -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,073   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.pyx -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,077   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,129   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,133   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.c -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,209   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_adaptive.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,273   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.c -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,320   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/tau_leaping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,359   copying build/lib.linux-armv7l-3.9/pyssa/algorithms/direct.pyx -> build/bdist.linux-armv7l/wheel/pyssa/algorithms
2021-07-16T05:18:37,363   copying build/lib.linux-armv7l-3.9/pyssa/__init__.py -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,367   copying build/lib.linux-armv7l-3.9/pyssa/utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,416   copying build/lib.linux-armv7l-3.9/pyssa/utils.c -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,465   copying build/lib.linux-armv7l-3.9/pyssa/results.py -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,469   copying build/lib.linux-armv7l-3.9/pyssa/utils.pxd -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,474   copying build/lib.linux-armv7l-3.9/pyssa/simulation.py -> build/bdist.linux-armv7l/wheel/pyssa
2021-07-16T05:18:37,478   running install_egg_info
2021-07-16T05:18:37,488   Copying pyssa.egg-info to build/bdist.linux-armv7l/wheel/pyssa-0.9.1-py3.9.egg-info
2021-07-16T05:18:37,547   running install_scripts
2021-07-16T05:18:37,664   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-16T05:18:37,668   adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
2021-07-16T05:18:37,679   creating build/bdist.linux-armv7l/wheel/pyssa-0.9.1.dist-info/WHEEL
2021-07-16T05:18:37,685   creating '/tmp/pip-wheel-o8qljjez/pyssa-0.9.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-16T05:18:37,689   adding 'pyssa/__init__.py'
2021-07-16T05:18:37,694   adding 'pyssa/results.py'
2021-07-16T05:18:37,700   adding 'pyssa/simulation.py'
2021-07-16T05:18:37,905   adding 'pyssa/utils.c'
2021-07-16T05:18:38,538   adding 'pyssa/utils.cpython-39-arm-linux-gnueabihf.so'
2021-07-16T05:18:38,559   adding 'pyssa/utils.pxd'
2021-07-16T05:18:38,570   adding 'pyssa/utils.pyx'
2021-07-16T05:18:38,573   adding 'pyssa/algorithms/__init__.py'
2021-07-16T05:18:38,763   adding 'pyssa/algorithms/direct.c'
2021-07-16T05:18:39,103   adding 'pyssa/algorithms/direct.cpython-39-arm-linux-gnueabihf.so'
2021-07-16T05:18:39,113   adding 'pyssa/algorithms/direct.pyx'
2021-07-16T05:18:39,263   adding 'pyssa/algorithms/tau_adaptive.c'
2021-07-16T05:18:39,945   adding 'pyssa/algorithms/tau_adaptive.cpython-39-arm-linux-gnueabihf.so'
2021-07-16T05:18:39,994   adding 'pyssa/algorithms/tau_adaptive.pyx'
2021-07-16T05:18:40,374   adding 'pyssa/algorithms/tau_leaping.c'
2021-07-16T05:18:40,802   adding 'pyssa/algorithms/tau_leaping.cpython-39-arm-linux-gnueabihf.so'
2021-07-16T05:18:40,827   adding 'pyssa/algorithms/tau_leaping.pyx'
2021-07-16T05:18:40,831   adding 'pyssa-0.9.1.dist-info/AUTHORS.rst'
2021-07-16T05:18:40,832   adding 'pyssa-0.9.1.dist-info/LICENSE'
2021-07-16T05:18:40,834   adding 'pyssa-0.9.1.dist-info/METADATA'
2021-07-16T05:18:40,837   adding 'pyssa-0.9.1.dist-info/WHEEL'
2021-07-16T05:18:40,839   adding 'pyssa-0.9.1.dist-info/top_level.txt'
2021-07-16T05:18:40,840   adding 'pyssa-0.9.1.dist-info/RECORD'
2021-07-16T05:18:40,885   removing build/bdist.linux-armv7l/wheel
2021-07-16T05:18:41,358   Building wheel for pyssa (setup.py): finished with status 'done'
2021-07-16T05:18:41,421   Created wheel for pyssa: filename=pyssa-0.9.1-cp39-cp39-linux_armv7l.whl size=2156458 sha256=7781ca5500801126c5916371dc477fbac81e1865dea1847a6555a0f678742800
2021-07-16T05:18:41,422   Stored in directory: /tmp/pip-ephem-wheel-cache-qnhpz5xw/wheels/ca/ee/98/8df33b8e0368aeee40ae9f95bd9158ac07efb7737ea4d5e0ff
2021-07-16T05:18:41,446 Successfully built pyssa
2021-07-16T05:18:41,552 Removed build tracker: '/tmp/pip-req-tracker-5p3ocdm5'