2021-07-16T08:47:39,530 Created temporary directory: /tmp/pip-ephem-wheel-cache-56apk3hz
2021-07-16T08:47:39,539 Created temporary directory: /tmp/pip-req-tracker-c7zw19h1
2021-07-16T08:47:39,540 Initialized build tracking at /tmp/pip-req-tracker-c7zw19h1
2021-07-16T08:47:39,540 Created build tracker: /tmp/pip-req-tracker-c7zw19h1
2021-07-16T08:47:39,540 Entered build tracker: /tmp/pip-req-tracker-c7zw19h1
2021-07-16T08:47:39,541 Created temporary directory: /tmp/pip-wheel-2g9n3_p6
2021-07-16T08:47:39,592 1 location(s) to search for versions of bgzip:
2021-07-16T08:47:39,592 * https://pypi.org/simple/bgzip/
2021-07-16T08:47:39,593 Fetching project page and analyzing links: https://pypi.org/simple/bgzip/
2021-07-16T08:47:39,594 Getting page https://pypi.org/simple/bgzip/
2021-07-16T08:47:39,596 Found index url https://pypi.org/simple
2021-07-16T08:47:39,713   Found link https://files.pythonhosted.org/packages/16/31/5c44418ae4c692f06634c350ac515915abbf26988dc36c3db0ad5bef7dc8/bgzip-0.0.2.tar.gz#sha256=8a4231aee7de57a9611d615761ea14a7a562b0321494c0c6910a49ee7d1c3e17 (from https://pypi.org/simple/bgzip/), version: 0.0.2
2021-07-16T08:47:39,714   Found link https://files.pythonhosted.org/packages/89/07/61299e64d9085fad3e42d21f0417639c80b0997046ad50e62f1394abace5/bgzip-0.1.0.tar.gz#sha256=3d5358392d99b163206cc34c3a81e7ef4734993842e5fe012323d1ca353f13a6 (from https://pypi.org/simple/bgzip/), version: 0.1.0
2021-07-16T08:47:39,715   Found link https://files.pythonhosted.org/packages/4f/11/5eb47568e6fd93b37c4c4e1dadd4d2b0586bf3ca49961ea278ed1d3e25ec/bgzip-0.2.0.tar.gz#sha256=ed18b10123ed2c222db3156bad953f28f4d0eb01203267be6db070644fd08c7a (from https://pypi.org/simple/bgzip/), version: 0.2.0
2021-07-16T08:47:39,715   Found link https://files.pythonhosted.org/packages/d1/47/fc15119cb529a00191390ee3946ccc0d51063892da41d52e57b011438e14/bgzip-0.2.1.tar.gz#sha256=972aa66f11829acb92b31c42e9d9d45c81504f78357aa19d54a354009104bba9 (from https://pypi.org/simple/bgzip/), version: 0.2.1
2021-07-16T08:47:39,716   Found link https://files.pythonhosted.org/packages/dd/65/f69f3a3eef5ffd9e8e1159f3ad95d1391e77ecdeeeb4b9b7256e16cf838f/bgzip-0.2.2.tar.gz#sha256=30eecc85b797225e1a842dbfe901931a532c5533b4a144584c85f72288ddb385 (from https://pypi.org/simple/bgzip/), version: 0.2.2
2021-07-16T08:47:39,717   Found link https://files.pythonhosted.org/packages/60/8f/7178c73a962a9dce2901d9b4f0063579418a1ce9197be517a0576a03f73d/bgzip-0.3.0.tar.gz#sha256=7e45a6cfab8d860af3d7f3a3df36d27e0aa0724f1a5eb9b44464b9408e2ba19b (from https://pypi.org/simple/bgzip/), version: 0.3.0
2021-07-16T08:47:39,718   Found link https://files.pythonhosted.org/packages/76/1e/e83f1af0bbbb4332e08a6c1b513ea003c008868c08fbcf2d80757c1e48c5/bgzip-0.3.1.tar.gz#sha256=ecd93a1ae51209d45d20695d1de19faed2bc82dff8adddd39007fffa2b74831c (from https://pypi.org/simple/bgzip/), version: 0.3.1
2021-07-16T08:47:39,719   Found link https://files.pythonhosted.org/packages/8a/31/697e749ca86468a79309ec21093506be15f8645f81fe0341f43aa2a85249/bgzip-0.3.2.tar.gz#sha256=067a774070e87b433e8c3c41822b44cec1e8f4ab0959e0e682ccd3cc51c1a592 (from https://pypi.org/simple/bgzip/), version: 0.3.2
2021-07-16T08:47:39,719   Found link https://files.pythonhosted.org/packages/48/1f/f4b3e60ca8a62a30fdddf920e80c003175d4419867ce5b4aadb79efbc970/bgzip-0.3.3.tar.gz#sha256=0284a7da2963f835bf8af4a69492b232da23825ccd134635f3c71c0762a902c7 (from https://pypi.org/simple/bgzip/), version: 0.3.3
2021-07-16T08:47:39,720   Found link https://files.pythonhosted.org/packages/33/0c/2cd70a1170e6093e1e259f96ae3aa98721e670f3deea885c0114e928162b/bgzip-0.3.4.tar.gz#sha256=11b3e4028f196c88f59833fcca3f3bf805c46434771005eab9d6abf129258bc2 (from https://pypi.org/simple/bgzip/), version: 0.3.4
2021-07-16T08:47:39,720   Found link https://files.pythonhosted.org/packages/0d/9e/d6f1c105cca14a7544e3d0465bc0a6566f65ef24fb9fa3d7a39ca3040215/bgzip-0.3.5.tar.gz#sha256=00cdb175f6c2e379a04898c89858492b5db3df4f9d6a285e7068e882c8128ef8 (from https://pypi.org/simple/bgzip/), version: 0.3.5
2021-07-16T08:47:39,721   Found link https://files.pythonhosted.org/packages/28/fd/9c693ecdcfb16f9a0384feffa12423643ce25bf359007c830aaf94af0404/bgzip-0.4.0.tar.gz#sha256=2562202a99b0cff1777d051cd3ed7ffa9a568ff8486f922935808e1a0478f01c (from https://pypi.org/simple/bgzip/), version: 0.4.0
2021-07-16T08:47:39,722 Skipping link: not a file: https://pypi.org/simple/bgzip/
2021-07-16T08:47:39,751 Given no hashes to check 1 links for project 'bgzip': discarding no candidates
2021-07-16T08:47:39,781 Collecting bgzip==0.3.5
2021-07-16T08:47:39,783   Created temporary directory: /tmp/pip-unpack-_akecck0
2021-07-16T08:47:39,971   Downloading bgzip-0.3.5.tar.gz (61 kB)
2021-07-16T08:47:40,065   Added bgzip==0.3.5 from https://files.pythonhosted.org/packages/0d/9e/d6f1c105cca14a7544e3d0465bc0a6566f65ef24fb9fa3d7a39ca3040215/bgzip-0.3.5.tar.gz#sha256=00cdb175f6c2e379a04898c89858492b5db3df4f9d6a285e7068e882c8128ef8 to build tracker '/tmp/pip-req-tracker-c7zw19h1'
2021-07-16T08:47:40,066     Running setup.py (path:/tmp/pip-wheel-2g9n3_p6/bgzip_bf74bb569f454ad486dfebc375a5ab8d/setup.py) egg_info for package bgzip
2021-07-16T08:47:40,068     Created temporary directory: /tmp/pip-pip-egg-info-aecsrb7a
2021-07-16T08:47:40,068     Running command python setup.py egg_info
2021-07-16T08:47:41,632     running egg_info
2021-07-16T08:47:41,639     creating /tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info
2021-07-16T08:47:41,640     writing /tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info/PKG-INFO
2021-07-16T08:47:41,645     writing dependency_links to /tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info/dependency_links.txt
2021-07-16T08:47:41,649     writing top-level names to /tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info/top_level.txt
2021-07-16T08:47:41,651     writing manifest file '/tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info/SOURCES.txt'
2021-07-16T08:47:42,203     reading manifest file '/tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info/SOURCES.txt'
2021-07-16T08:47:42,205     reading manifest template 'MANIFEST.in'
2021-07-16T08:47:42,211     writing manifest file '/tmp/pip-pip-egg-info-aecsrb7a/bgzip.egg-info/SOURCES.txt'
2021-07-16T08:47:42,314   Source in /tmp/pip-wheel-2g9n3_p6/bgzip_bf74bb569f454ad486dfebc375a5ab8d has version 0.3.5, which satisfies requirement bgzip==0.3.5 from https://files.pythonhosted.org/packages/0d/9e/d6f1c105cca14a7544e3d0465bc0a6566f65ef24fb9fa3d7a39ca3040215/bgzip-0.3.5.tar.gz#sha256=00cdb175f6c2e379a04898c89858492b5db3df4f9d6a285e7068e882c8128ef8
2021-07-16T08:47:42,316   Removed bgzip==0.3.5 from https://files.pythonhosted.org/packages/0d/9e/d6f1c105cca14a7544e3d0465bc0a6566f65ef24fb9fa3d7a39ca3040215/bgzip-0.3.5.tar.gz#sha256=00cdb175f6c2e379a04898c89858492b5db3df4f9d6a285e7068e882c8128ef8 from build tracker '/tmp/pip-req-tracker-c7zw19h1'
2021-07-16T08:47:42,331 Created temporary directory: /tmp/pip-unpack-yhw2v9kx
2021-07-16T08:47:42,332 Building wheels for collected packages: bgzip
2021-07-16T08:47:42,337   Created temporary directory: /tmp/pip-wheel-3xh3sgqo
2021-07-16T08:47:42,338   Building wheel for bgzip (setup.py): started
2021-07-16T08:47:42,338   Destination directory: /tmp/pip-wheel-3xh3sgqo
2021-07-16T08:47:42,339   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-2g9n3_p6/bgzip_bf74bb569f454ad486dfebc375a5ab8d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-2g9n3_p6/bgzip_bf74bb569f454ad486dfebc375a5ab8d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3xh3sgqo
2021-07-16T08:47:44,730   running bdist_wheel
2021-07-16T08:47:45,219   running build
2021-07-16T08:47:45,220   running build_py
2021-07-16T08:47:45,589   creating build
2021-07-16T08:47:45,590   creating build/lib.linux-armv7l-3.9
2021-07-16T08:47:45,592   creating build/lib.linux-armv7l-3.9/bgzip
2021-07-16T08:47:45,595   copying bgzip/__init__.py -> build/lib.linux-armv7l-3.9/bgzip
2021-07-16T08:47:45,600   copying bgzip/version.py -> build/lib.linux-armv7l-3.9/bgzip
2021-07-16T08:47:45,616   running build_ext
2021-07-16T08:47:45,629   building 'bgzip.bgzip_utils' extension
2021-07-16T08:47:45,631   creating build/temp.linux-armv7l-3.9
2021-07-16T08:47:45,632   creating build/temp.linux-armv7l-3.9/bgzip_utils
2021-07-16T08:47:45,634   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c bgzip_utils/bgzip_utils.c -o build/temp.linux-armv7l-3.9/bgzip_utils/bgzip_utils.o -O3 -fopenmp
2021-07-16T08:47:46,431   bgzip_utils/bgzip_utils.c: In function ‘__Pyx_InitGlobals’:
2021-07-16T08:47:46,435   bgzip_utils/bgzip_utils.c:5937:1: warning: ‘PyEval_InitThreads’ is deprecated [-Wdeprecated-declarations]
2021-07-16T08:47:46,435    5937 | PyEval_InitThreads();
2021-07-16T08:47:46,435         | ^~~~~~~~~~~~~~~~~~
2021-07-16T08:47:46,436   In file included from /usr/include/python3.9/Python.h:145,
2021-07-16T08:47:46,436                    from bgzip_utils/bgzip_utils.c:4:
2021-07-16T08:47:46,437   /usr/include/python3.9/ceval.h:130:37: note: declared here
2021-07-16T08:47:46,437     130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
2021-07-16T08:47:46,437         |                                     ^~~~~~~~~~~~~~~~~~
2021-07-16T08:48:00,289   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/bgzip_utils/bgzip_utils.o -lz -o build/lib.linux-armv7l-3.9/bgzip/bgzip_utils.cpython-39-arm-linux-gnueabihf.so -fopenmp
2021-07-16T08:48:00,511   installing to build/bdist.linux-armv7l/wheel
2021-07-16T08:48:00,512   running install
2021-07-16T08:48:00,515   running install_lib
2021-07-16T08:48:00,523   creating build/bdist.linux-armv7l
2021-07-16T08:48:00,524   creating build/bdist.linux-armv7l/wheel
2021-07-16T08:48:00,528   creating build/bdist.linux-armv7l/wheel/bgzip
2021-07-16T08:48:00,530   copying build/lib.linux-armv7l-3.9/bgzip/bgzip_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bgzip
2021-07-16T08:48:00,549   copying build/lib.linux-armv7l-3.9/bgzip/__init__.py -> build/bdist.linux-armv7l/wheel/bgzip
2021-07-16T08:48:00,559   copying build/lib.linux-armv7l-3.9/bgzip/version.py -> build/bdist.linux-armv7l/wheel/bgzip
2021-07-16T08:48:00,562   running install_egg_info
2021-07-16T08:48:00,591   running egg_info
2021-07-16T08:48:00,592   writing bgzip.egg-info/PKG-INFO
2021-07-16T08:48:00,595   writing dependency_links to bgzip.egg-info/dependency_links.txt
2021-07-16T08:48:00,599   writing top-level names to bgzip.egg-info/top_level.txt
2021-07-16T08:48:00,606   reading manifest file 'bgzip.egg-info/SOURCES.txt'
2021-07-16T08:48:00,610   reading manifest template 'MANIFEST.in'
2021-07-16T08:48:00,617   writing manifest file 'bgzip.egg-info/SOURCES.txt'
2021-07-16T08:48:00,620   Copying bgzip.egg-info to build/bdist.linux-armv7l/wheel/bgzip-0.3.5-py3.9.egg-info
2021-07-16T08:48:00,635   running install_scripts
2021-07-16T08:48:00,755   creating build/bdist.linux-armv7l/wheel/bgzip-0.3.5.dist-info/WHEEL
2021-07-16T08:48:00,758   creating '/tmp/pip-wheel-3xh3sgqo/bgzip-0.3.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-16T08:48:00,764   adding 'bgzip/__init__.py'
2021-07-16T08:48:00,871   adding 'bgzip/bgzip_utils.cpython-39-arm-linux-gnueabihf.so'
2021-07-16T08:48:00,876   adding 'bgzip/version.py'
2021-07-16T08:48:00,879   adding 'bgzip-0.3.5.dist-info/METADATA'
2021-07-16T08:48:00,881   adding 'bgzip-0.3.5.dist-info/WHEEL'
2021-07-16T08:48:00,883   adding 'bgzip-0.3.5.dist-info/top_level.txt'
2021-07-16T08:48:00,884   adding 'bgzip-0.3.5.dist-info/RECORD'
2021-07-16T08:48:00,889   removing build/bdist.linux-armv7l/wheel
2021-07-16T08:48:01,007   Building wheel for bgzip (setup.py): finished with status 'done'
2021-07-16T08:48:01,019   Created wheel for bgzip: filename=bgzip-0.3.5-cp39-cp39-linux_armv7l.whl size=152576 sha256=e1847dd24562bf2b37c9699e1afa5bffdb6bedaa37a4e4eccd8c3aa3b5116234
2021-07-16T08:48:01,020   Stored in directory: /tmp/pip-ephem-wheel-cache-56apk3hz/wheels/88/e4/bc/bc752518213ff8234baead4970643aad5b0783d418ef01b1cd
2021-07-16T08:48:01,042 Successfully built bgzip
2021-07-16T08:48:01,055 Removed build tracker: '/tmp/pip-req-tracker-c7zw19h1'