2021-07-18T20:12:25,013 Created temporary directory: /tmp/pip-ephem-wheel-cache-awjbkc_m 2021-07-18T20:12:25,016 Created temporary directory: /tmp/pip-req-tracker-7a3jtbs3 2021-07-18T20:12:25,017 Initialized build tracking at /tmp/pip-req-tracker-7a3jtbs3 2021-07-18T20:12:25,017 Created build tracker: /tmp/pip-req-tracker-7a3jtbs3 2021-07-18T20:12:25,017 Entered build tracker: /tmp/pip-req-tracker-7a3jtbs3 2021-07-18T20:12:25,018 Created temporary directory: /tmp/pip-wheel-06xpwa2i 2021-07-18T20:12:25,046 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-07-18T20:12:25,049 2 location(s) to search for versions of mgkit: 2021-07-18T20:12:25,049 * https://pypi.org/simple/mgkit/ 2021-07-18T20:12:25,049 * https://www.piwheels.org/simple/mgkit/ 2021-07-18T20:12:25,049 Fetching project page and analyzing links: https://pypi.org/simple/mgkit/ 2021-07-18T20:12:25,050 Getting page https://pypi.org/simple/mgkit/ 2021-07-18T20:12:25,051 Found index url 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https://files.pythonhosted.org/packages/f3/fe/ac6168cb5a6bf676cdb18e304a00aea88434422c94a3211fff4e80f8b9a3/mgkit-0.3.4.tar.gz#sha256=635d6b8c6874492925635ac7bf8d2bddf12dd5cb5a5cc8d7aac008e20f7c5941 (from https://pypi.org/simple/mgkit/), version: 0.3.4 2021-07-18T20:12:25,266 Found link https://files.pythonhosted.org/packages/55/e8/542cb162422510002792bf2c9a95665f071879f6e6daf6b6a6019ec4747a/mgkit-0.4.0.tar.gz#sha256=17364ca56eac62ce3313f18fe3059267bf177b5fb855332995c8f740bd74c3b4 (from https://pypi.org/simple/mgkit/), version: 0.4.0 2021-07-18T20:12:25,267 Found link https://files.pythonhosted.org/packages/32/36/049aa9750da61265b729628942d7857f883e04f0c904d3d2dc658625ee70/mgkit-0.4.1.tar.gz#sha256=33a1f83130e3a93ca767cfa61a63abb6dc360882dfd7907a27ce5ab4969af8fe (from https://pypi.org/simple/mgkit/), version: 0.4.1 2021-07-18T20:12:25,267 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/7c/60/4651f7cd1eab088917fed5cc5abc90b6190d7597979c97184d5b41ecefc8/mgkit-0.4.2-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=b330ee1acce3f92bfaea9af76cf81f667126f9a8faf20a693f89b55a2a55e244 (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,267 Found link https://files.pythonhosted.org/packages/24/97/ae8e3503289e7d05308575222b95922eaf93534d8b1055ea911e41553f02/mgkit-0.4.2.tar.gz#sha256=7bdd19ab58618a5cb6e1c275d0b93adff84a329a0fe9da071ed4c35eab92d325 (from https://pypi.org/simple/mgkit/), version: 0.4.2 2021-07-18T20:12:25,267 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/52/59/2acaae952375b323d339d489d5526d8fdcd09cd650da57050f9af40fee6a/mgkit-0.4.3-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=ce2ec99bf762d8feb9e1fadd59436192107107c53b050ea6977b2789d1bf1499 (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,268 Found link 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https://files.pythonhosted.org/packages/45/60/4151bf950a55bc4a3ec463590eb1c1b5f19a709c2888c6b431d15bf6fa65/mgkit-0.5.1-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=7d060198311bd9d1210a6b0973ba81aa82bcbf98808341d1d582cc9c06d2e814 (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,269 Found link https://files.pythonhosted.org/packages/4b/c7/7477ef3c06b3cebd434305f0a15badf6be9697dbac4034e7dfb9864a031e/mgkit-0.5.1.tar.gz#sha256=0c9d51396f0f0074639d2a467c92f8a4bddaa7dead652896311e8e661d802705 (from https://pypi.org/simple/mgkit/), version: 0.5.1 2021-07-18T20:12:25,269 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/03/68/56e2a61d2173b70764f1e74a4f2845f761506d105d372cc6e0446b25aff4/mgkit-0.5.2-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=8b0c81ecbd0b68ec1fc92b6a75f17780f731eec4b7e138d5199b05c5e9c0e5c3 (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,269 Found link https://files.pythonhosted.org/packages/5d/f0/502390012e7d6ee3116745103845b46308982bebc71ce03ad4a0cc8eaddd/mgkit-0.5.2.tar.gz#sha256=09b651f16f574d2e2035d38c1ebfcda831e003879a3610ee159e56bbc5c9f525 (from https://pypi.org/simple/mgkit/), version: 0.5.2 2021-07-18T20:12:25,269 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/6b/63/5da8ebd4fbd4bc8da9e4781cb081b0d7ca4ebab8695d557b932c44764469/mgkit-0.5.3-cp38-cp38-macosx_10_9_x86_64.whl#sha256=6fa9bfbd846f3af280c584da0063aa7edadd8f985144022201d223dab652457c (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,270 Found link https://files.pythonhosted.org/packages/b4/16/8bc71a99d55881d31d80a8de2a4c38bae06f52fcbe1ebf1aacafae5b096d/mgkit-0.5.3.tar.gz#sha256=391e97a40ecd74a4d07d179be563c38fb6158e79727863db890cea87e139b9e4 (from https://pypi.org/simple/mgkit/), version: 0.5.3 2021-07-18T20:12:25,270 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/db/b1/02cdce1781c53d7f71fec5f1fd6f23de735127037783fc6d12e1ae7ae535/mgkit-0.5.4-cp38-cp38-macosx_10_9_x86_64.whl#sha256=99a0c8f70265ca2272497ff6dd2f57516d71d36508324a7180e0b901abcad530 (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,270 Found link https://files.pythonhosted.org/packages/74/80/25255ea4d63da6108f297c5764d555ac81f1ddea90bd85ded6e6bdb3eded/mgkit-0.5.4.tar.gz#sha256=dae7e72dd3fab98328b9b26969088716dbf8245be61fb6495f55459bc608b25b (from https://pypi.org/simple/mgkit/), version: 0.5.4 2021-07-18T20:12:25,270 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/62/52/68c5b85d4f8a14a8db73c5b73c151adefd15b07d1c1aec2a9ccf72b5c2ad/mgkit-0.5.5-cp38-cp38-macosx_10_9_x86_64.whl#sha256=b6b7c04baf27df8251334f126bb59d41f2eeac58872612ab20b631e5dda2e5cb (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,271 Found link https://files.pythonhosted.org/packages/11/cd/aafab787514f3b2b61fbf03f2cd415c4b4e38455c863aacae6e9655de0b3/mgkit-0.5.5.tar.gz#sha256=ff53d622ddc7d6c2e9d1355b68b80879e7e3f56eeb8fe2c59704ef231ab80922 (from https://pypi.org/simple/mgkit/), version: 0.5.5 2021-07-18T20:12:25,271 Skipping link: No binaries permitted for mgkit: https://files.pythonhosted.org/packages/38/08/a9bb0df31aee34219a48c48b3b167e5ec2a45639f7cb04b8ebf97a2f6d2b/mgkit-0.5.6-cp38-cp38-macosx_10_9_x86_64.whl#sha256=d28937d2713456f464c9a52badf36146238821c0e2f8278221bd2268ccb302d4 (from https://pypi.org/simple/mgkit/) 2021-07-18T20:12:25,271 Found link https://files.pythonhosted.org/packages/52/8b/4917c3f4572d5413771b360286ca880ad3bd01b682b436b51c7d8cf04e63/mgkit-0.5.6.tar.gz#sha256=5cc88cd04280e3d078b42da2dc8635b7e702680a1bedb7d3bdf9746a3a63a394 (from https://pypi.org/simple/mgkit/), version: 0.5.6 2021-07-18T20:12:25,271 Fetching project page and analyzing links: https://www.piwheels.org/simple/mgkit/ 2021-07-18T20:12:25,272 Getting page https://www.piwheels.org/simple/mgkit/ 2021-07-18T20:12:25,273 Found index url https://www.piwheels.org/simple 2021-07-18T20:12:25,432 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.1.10-py3-none-any.whl#sha256=4e19fe06f31c4c2ef04b763a38439bd3a89e97a95d5483ef981ea7706f2ca354 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,433 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.1.11-py3-none-any.whl#sha256=9ecb02bf38c6d1eed21783410e4f6510af561b8ec808cfb4f379b7538da0f867 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,433 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.1.12-py3-none-any.whl#sha256=3b212b01e45f8feea89d11a9460a5eeb8401fc8de9b32a0775c9b4a68e6e276a (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,433 Skipping link: No binaries permitted for mgkit: 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link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.2.0-py2.py3-none-any.whl#sha256=2d5f16cbd7b85ba326738a227950e3a8bd5bf2e18b7e021ec13365733f942225 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,434 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.2.1-py3-none-any.whl#sha256=7175e8af9415b6a86f0e07ad5a40145f80ae82663494561c26a39282ba71e3b6 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,434 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.2.2-py3-none-any.whl#sha256=bc67c41e4fad5aa2453e341368937547605f46813c750ab8e8db3463d7e815a0 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,434 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.2.3-py3-none-any.whl#sha256=4a44f8e08d927d3e48a0311be63d918f8ec506263558fac5115f2864dc98939b (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,435 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.2.4-py3-none-any.whl#sha256=0a6217754b78e6efb0a0b3bafc6dfe70ab7ac5502aeb33db55da1479ca081546 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,435 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.2.5-py3-none-any.whl#sha256=76af0f57b0706693b7d7f02044eb0c5d92df01f2f9af99a34977d3b0c499155e (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,435 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.3.0-py3-none-any.whl#sha256=0d5a46f476ad93611fa23179e5be67a6761113811f9c900ff64cb0576f2d7f88 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,435 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.3.1-cp34-cp34m-linux_armv7l.whl#sha256=953bf03c11adb60b35a98f8b35e82dc8fdef133fb6f24d2dca6bd3f48ba2c2b6 (from 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2021-07-18T20:12:25,437 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.3.4-cp34-cp34m-linux_armv6l.whl#sha256=773ba45fe44b6d19de9f256b79352c838f390c847c01c6e8e87625ee29d97adc (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,437 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.3.4-cp34-cp34m-linux_armv7l.whl#sha256=773ba45fe44b6d19de9f256b79352c838f390c847c01c6e8e87625ee29d97adc (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,437 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.3.4-cp35-cp35m-linux_armv6l.whl#sha256=9bd854ebf56b003cec133e7116745f2c8a170a2fd4ad6419194f0576b70564a2 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,437 Skipping link: No binaries permitted for mgkit: 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2021-07-18T20:12:25,438 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.1-cp34-cp34m-linux_armv7l.whl#sha256=e72c4b5414e544b97bc1fe412de1b582b1a39ab131c78c4e553fbb2b2464e1c4 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,438 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.1-cp37-cp37m-linux_armv6l.whl#sha256=cc66d686cf08da6c69fb7d9d585955425e117b2bbc60195c14c58fbf63d60b64 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,439 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.1-cp37-cp37m-linux_armv7l.whl#sha256=cc66d686cf08da6c69fb7d9d585955425e117b2bbc60195c14c58fbf63d60b64 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,439 Skipping link: No binaries permitted for mgkit: 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2021-07-18T20:12:25,440 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.2-cp37-cp37m-linux_armv6l.whl#sha256=350fbd8ac4443490db4a41468f7f917c84865539ea069728ea316bf047afec33 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,440 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.2-cp37-cp37m-linux_armv7l.whl#sha256=350fbd8ac4443490db4a41468f7f917c84865539ea069728ea316bf047afec33 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,440 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.2-cp39-cp39-linux_armv6l.whl#sha256=c3a509751bfb8ff942d89019905cbbd1b2f6a947378f644c19cf13d997ef2f45 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,440 Skipping link: No binaries permitted for mgkit: 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2021-07-18T20:12:25,441 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.3-cp37-cp37m-linux_armv7l.whl#sha256=58cb1f27287dbfb9c78b0220256f3d88918b4ba0804fecb704f04bfebe7d4268 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,441 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.3-cp39-cp39-linux_armv6l.whl#sha256=14859afb3e980114c1147bcfab0ddd157e15f92a76a18f6d6f295db93186a1db (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,441 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.4.3-cp39-cp39-linux_armv7l.whl#sha256=14859afb3e980114c1147bcfab0ddd157e15f92a76a18f6d6f295db93186a1db (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,441 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=4c0c8e9c39b31d9c7dcf9b1a8e22605645c32bb34643056300dff15ff27acc27 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,442 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.0-cp37-cp37m-linux_armv7l.whl#sha256=4c0c8e9c39b31d9c7dcf9b1a8e22605645c32bb34643056300dff15ff27acc27 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,442 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.0-cp39-cp39-linux_armv6l.whl#sha256=1240819612f50de094825920e1b660e45625be43e9c2fd863465d96ec82351b7 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,442 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.0-cp39-cp39-linux_armv7l.whl#sha256=1240819612f50de094825920e1b660e45625be43e9c2fd863465d96ec82351b7 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,442 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.1-cp37-cp37m-linux_armv6l.whl#sha256=52e6af47719ab509002e108ab89f6761be051ccbf44e49253b5d0b9aa994e234 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,442 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.1-cp37-cp37m-linux_armv7l.whl#sha256=52e6af47719ab509002e108ab89f6761be051ccbf44e49253b5d0b9aa994e234 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,443 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.1-cp39-cp39-linux_armv6l.whl#sha256=90b078d88a28d16323dd4a5ae841dae37da8ccb1be6294b16c291dffd9946cf6 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,443 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.1-cp39-cp39-linux_armv7l.whl#sha256=90b078d88a28d16323dd4a5ae841dae37da8ccb1be6294b16c291dffd9946cf6 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,443 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.2-cp37-cp37m-linux_armv6l.whl#sha256=ed404a152a4da19b32b4501d36a4a7f099f85852eb81851ad4ac38ee33c8d1b8 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,443 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.2-cp37-cp37m-linux_armv7l.whl#sha256=ed404a152a4da19b32b4501d36a4a7f099f85852eb81851ad4ac38ee33c8d1b8 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,443 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.3-cp37-cp37m-linux_armv6l.whl#sha256=88a149451c4e9e0fe2bd86a050cb5f390d311deb5d68507b763d25a4a77ccd1b (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,444 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.3-cp37-cp37m-linux_armv7l.whl#sha256=88a149451c4e9e0fe2bd86a050cb5f390d311deb5d68507b763d25a4a77ccd1b (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,444 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.4-cp37-cp37m-linux_armv6l.whl#sha256=c426bbecc1deb051a61efaa53f36cc7660d321c936e033866535ec6740534144 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,444 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.4-cp37-cp37m-linux_armv7l.whl#sha256=c426bbecc1deb051a61efaa53f36cc7660d321c936e033866535ec6740534144 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,444 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.5-cp37-cp37m-linux_armv6l.whl#sha256=033d0dc0613b2699e5505cc5a808affc90b075a890d59f9e296a4bc8ef93487f (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,444 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.5-cp37-cp37m-linux_armv7l.whl#sha256=033d0dc0613b2699e5505cc5a808affc90b075a890d59f9e296a4bc8ef93487f (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,444 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.6-cp37-cp37m-linux_armv6l.whl#sha256=699abdd52a10cd5b343231975c41683caefcb5cbd29f80eeba9dcd032411fb06 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,445 Skipping link: No binaries permitted for mgkit: https://www.piwheels.org/simple/mgkit/mgkit-0.5.6-cp37-cp37m-linux_armv7l.whl#sha256=699abdd52a10cd5b343231975c41683caefcb5cbd29f80eeba9dcd032411fb06 (from https://www.piwheels.org/simple/mgkit/) 2021-07-18T20:12:25,445 Skipping link: not a file: https://www.piwheels.org/simple/mgkit/ 2021-07-18T20:12:25,445 Skipping link: not a file: https://pypi.org/simple/mgkit/ 2021-07-18T20:12:25,467 Given no hashes to check 1 links for project 'mgkit': discarding no candidates 2021-07-18T20:12:25,485 Collecting mgkit==0.5.2 2021-07-18T20:12:25,487 Created temporary directory: /tmp/pip-unpack-4y9l6li7 2021-07-18T20:12:27,785 Downloading mgkit-0.5.2.tar.gz (11.6 MB) 2021-07-18T20:12:30,163 Added mgkit==0.5.2 from https://files.pythonhosted.org/packages/5d/f0/502390012e7d6ee3116745103845b46308982bebc71ce03ad4a0cc8eaddd/mgkit-0.5.2.tar.gz#sha256=09b651f16f574d2e2035d38c1ebfcda831e003879a3610ee159e56bbc5c9f525 to build tracker '/tmp/pip-req-tracker-7a3jtbs3' 2021-07-18T20:12:30,164 Running setup.py (path:/tmp/pip-wheel-06xpwa2i/mgkit_f205ac37ea4a438cabef026dc75eff26/setup.py) egg_info for package mgkit 2021-07-18T20:12:30,165 Created temporary directory: /tmp/pip-pip-egg-info-yunhwyvw 2021-07-18T20:12:30,165 Running command python setup.py egg_info 2021-07-18T20:12:31,338 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-18T20:12:31,338 warnings.warn( 2021-07-18T20:12:34,541 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-18T20:12:34,542 warnings.warn( 2021-07-18T20:12:34,565 running egg_info 2021-07-18T20:12:34,567 creating /tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info 2021-07-18T20:12:34,569 writing /tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/PKG-INFO 2021-07-18T20:12:34,571 writing dependency_links to /tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/dependency_links.txt 2021-07-18T20:12:34,573 writing entry points to /tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/entry_points.txt 2021-07-18T20:12:34,574 writing requirements to /tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/requires.txt 2021-07-18T20:12:34,575 writing top-level names to /tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/top_level.txt 2021-07-18T20:12:34,577 writing manifest file '/tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/SOURCES.txt' 2021-07-18T20:12:35,020 reading manifest file '/tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/SOURCES.txt' 2021-07-18T20:12:35,022 reading manifest template 'MANIFEST.in' 2021-07-18T20:12:35,091 warning: no previously-included files matching '*' found under directory 'docs/build' 2021-07-18T20:12:35,092 warning: manifest_maker: MANIFEST.in, line 3: 'recursive-exclude' expects ... 2021-07-18T20:12:35,093 warning: no previously-included files matching '*' found under directory 'docs/source/pipeline/tutorial-data/' 2021-07-18T20:12:35,137 warning: no previously-included files matching '*' found under directory 'tests/mg_data' 2021-07-18T20:12:35,138 warning: no previously-included files matching '*.gz' found under directory 'docs/source/examples/db' 2021-07-18T20:12:35,139 warning: no previously-included files matching 'asse*' found under directory 'docs/source/examples/db' 2021-07-18T20:12:35,141 warning: no previously-included files matching 'gff-dbm' found under directory 'docs/source/examples/db' 2021-07-18T20:12:35,142 warning: no previously-included files matching '.DS_Store' found under directory 'docs' 2021-07-18T20:12:35,143 warning: no previously-included files matching '__MACOSX' found under directory '.' 2021-07-18T20:12:35,144 warning: no previously-included files matching 'tutorial-*data*' found under directory 'docs/source/pipeline/' 2021-07-18T20:12:35,144 adding license file 'LICENSE.txt' 2021-07-18T20:12:35,156 writing manifest file '/tmp/pip-pip-egg-info-yunhwyvw/mgkit.egg-info/SOURCES.txt' 2021-07-18T20:12:35,245 Source in /tmp/pip-wheel-06xpwa2i/mgkit_f205ac37ea4a438cabef026dc75eff26 has version 0.5.2, which satisfies requirement mgkit==0.5.2 from https://files.pythonhosted.org/packages/5d/f0/502390012e7d6ee3116745103845b46308982bebc71ce03ad4a0cc8eaddd/mgkit-0.5.2.tar.gz#sha256=09b651f16f574d2e2035d38c1ebfcda831e003879a3610ee159e56bbc5c9f525 2021-07-18T20:12:35,246 Removed mgkit==0.5.2 from https://files.pythonhosted.org/packages/5d/f0/502390012e7d6ee3116745103845b46308982bebc71ce03ad4a0cc8eaddd/mgkit-0.5.2.tar.gz#sha256=09b651f16f574d2e2035d38c1ebfcda831e003879a3610ee159e56bbc5c9f525 from build tracker '/tmp/pip-req-tracker-7a3jtbs3' 2021-07-18T20:12:35,251 Created temporary directory: /tmp/pip-unpack-_wruxxfu 2021-07-18T20:12:35,251 Building wheels for collected packages: mgkit 2021-07-18T20:12:35,258 Created temporary directory: /tmp/pip-wheel-doayo720 2021-07-18T20:12:35,258 Building wheel for mgkit (setup.py): started 2021-07-18T20:12:35,258 Destination directory: /tmp/pip-wheel-doayo720 2021-07-18T20:12:35,259 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-06xpwa2i/mgkit_f205ac37ea4a438cabef026dc75eff26/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-06xpwa2i/mgkit_f205ac37ea4a438cabef026dc75eff26/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-doayo720 2021-07-18T20:12:36,427 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-18T20:12:36,427 warnings.warn( 2021-07-18T20:12:37,126 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'upload-dir' will not be supported in future versions. Please use the underscore name 'upload_dir' instead 2021-07-18T20:12:37,126 warnings.warn( 2021-07-18T20:12:37,182 running bdist_wheel 2021-07-18T20:12:37,348 running build 2021-07-18T20:12:37,349 running build_py 2021-07-18T20:12:37,509 creating build 2021-07-18T20:12:37,509 creating build/lib.linux-armv7l-3.9 2021-07-18T20:12:37,510 creating build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,511 copying mgkit/__init__.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,513 copying mgkit/align.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,515 copying mgkit/logger.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,517 copying mgkit/simple_cache.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,519 copying mgkit/graphs.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,522 copying mgkit/kegg.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,525 copying mgkit/taxon.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,528 copying mgkit/consts.py -> build/lib.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,531 creating build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,532 copying mgkit/mappings/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,534 copying mgkit/mappings/eggnog.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,536 copying mgkit/mappings/cazy.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,538 copying mgkit/mappings/pandas_map.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,540 copying mgkit/mappings/enzyme.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,542 copying mgkit/mappings/utils.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,544 copying mgkit/mappings/go.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,546 copying mgkit/mappings/taxon.py -> build/lib.linux-armv7l-3.9/mgkit/mappings 2021-07-18T20:12:37,549 creating build/lib.linux-armv7l-3.9/mgkit/db 2021-07-18T20:12:37,550 copying mgkit/db/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/db 2021-07-18T20:12:37,552 copying mgkit/db/dbm.py -> build/lib.linux-armv7l-3.9/mgkit/db 2021-07-18T20:12:37,554 copying mgkit/db/mongo.py -> build/lib.linux-armv7l-3.9/mgkit/db 2021-07-18T20:12:37,557 creating build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,558 copying mgkit/filter/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,560 copying mgkit/filter/reads.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,562 copying mgkit/filter/common.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,564 copying mgkit/filter/gff.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,567 copying mgkit/filter/lists.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,569 copying mgkit/filter/taxon.py -> build/lib.linux-armv7l-3.9/mgkit/filter 2021-07-18T20:12:37,572 creating build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,573 copying mgkit/snps/conv_func.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,576 copying mgkit/snps/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,578 copying mgkit/snps/filter.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,580 copying mgkit/snps/classes.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,582 copying mgkit/snps/funcs.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,585 copying mgkit/snps/mapper.py -> build/lib.linux-armv7l-3.9/mgkit/snps 2021-07-18T20:12:37,588 creating build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,589 copying mgkit/io/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,591 copying mgkit/io/gff.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,595 copying mgkit/io/snpdat.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,598 copying mgkit/io/fastq.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,600 copying mgkit/io/utils.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,603 copying mgkit/io/fasta.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,605 copying mgkit/io/blast.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,608 copying mgkit/io/uniprot.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,610 copying mgkit/io/glimmer.py -> build/lib.linux-armv7l-3.9/mgkit/io 2021-07-18T20:12:37,613 creating build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,613 copying mgkit/plots/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,616 copying mgkit/plots/heatmap.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,618 copying mgkit/plots/utils.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,620 copying mgkit/plots/boxplot.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,623 copying mgkit/plots/abund.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,625 copying mgkit/plots/colors.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,627 copying mgkit/plots/unused.py -> build/lib.linux-armv7l-3.9/mgkit/plots 2021-07-18T20:12:37,631 creating build/lib.linux-armv7l-3.9/mgkit/net 2021-07-18T20:12:37,631 copying mgkit/net/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-18T20:12:37,633 copying mgkit/net/utils.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-18T20:12:37,635 copying mgkit/net/embl.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-18T20:12:37,638 copying mgkit/net/uniprot.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-18T20:12:37,640 copying mgkit/net/pfam.py -> build/lib.linux-armv7l-3.9/mgkit/net 2021-07-18T20:12:37,643 creating build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,644 copying mgkit/workflow/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,646 copying mgkit/workflow/add_gff_info.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,650 copying mgkit/workflow/taxon_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,653 copying mgkit/workflow/edit_gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,655 copying mgkit/workflow/filter_gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,658 copying mgkit/workflow/sampling_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,660 copying mgkit/workflow/fasta_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,663 copying mgkit/workflow/utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,664 copying mgkit/workflow/fastq_utils.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,667 copying mgkit/workflow/snp_parser.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,669 copying mgkit/workflow/json2gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,671 copying mgkit/workflow/pnps_gen.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,674 copying mgkit/workflow/blast2gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,676 copying mgkit/workflow/hmmer2gff.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,678 copying mgkit/workflow/extract_gff_info.py -> build/lib.linux-armv7l-3.9/mgkit/workflow 2021-07-18T20:12:37,682 creating build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,683 copying mgkit/utils/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,685 copying mgkit/utils/common.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,687 copying mgkit/utils/sequence.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,690 copying mgkit/utils/dictionary.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,693 copying mgkit/utils/trans_tables.py -> build/lib.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,696 creating build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-18T20:12:37,696 copying mgkit/counts/__init__.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-18T20:12:37,698 copying mgkit/counts/glm.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-18T20:12:37,701 copying mgkit/counts/func.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-18T20:12:37,704 copying mgkit/counts/scaling.py -> build/lib.linux-armv7l-3.9/mgkit/counts 2021-07-18T20:12:37,714 running build_ext 2021-07-18T20:12:37,721 building 'mgkit.utils._sequence' extension 2021-07-18T20:12:37,721 creating build/temp.linux-armv7l-3.9 2021-07-18T20:12:37,722 creating build/temp.linux-armv7l-3.9/mgkit 2021-07-18T20:12:37,722 creating build/temp.linux-armv7l-3.9/mgkit/utils 2021-07-18T20:12:37,723 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c mgkit/utils/_sequence.c -o build/temp.linux-armv7l-3.9/mgkit/utils/_sequence.o 2021-07-18T20:12:38,209 mgkit/utils/_sequence.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-18T20:12:38,211 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,212 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,212 | ^ 2021-07-18T20:12:38,212 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,212 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,212 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,212 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,212 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,213 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,215 mgkit/utils/_sequence.c:5143:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,215 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,215 | ^ 2021-07-18T20:12:38,215 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,216 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,216 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,216 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-18T20:12:38,216 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-18T20:12:38,216 | ^~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,218 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,218 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,218 | ^ 2021-07-18T20:12:38,218 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,219 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,219 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,219 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,219 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,219 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,221 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,221 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,221 | ^ 2021-07-18T20:12:38,221 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,222 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,222 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,222 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,222 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,222 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,224 mgkit/utils/_sequence.c:5143:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,224 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,224 | ^ 2021-07-18T20:12:38,224 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,225 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,225 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,225 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-18T20:12:38,225 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-18T20:12:38,225 | ^~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,227 mgkit/utils/_sequence.c:5143:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,227 5143 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,227 | ^ 2021-07-18T20:12:38,228 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,228 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,228 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,228 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,228 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,228 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,231 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,231 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,231 | ^ 2021-07-18T20:12:38,232 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,232 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,232 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,232 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,232 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,232 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,234 mgkit/utils/_sequence.c:5159:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,234 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,234 | ^ 2021-07-18T20:12:38,235 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,235 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,235 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,235 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-18T20:12:38,235 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-18T20:12:38,235 | ^~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,237 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,237 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,237 | ^ 2021-07-18T20:12:38,238 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,238 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,238 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,238 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,238 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,238 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,240 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,240 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,241 | ^ 2021-07-18T20:12:38,241 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,241 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,241 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,241 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,241 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,241 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,243 mgkit/utils/_sequence.c:5159:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,243 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,244 | ^ 2021-07-18T20:12:38,244 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,244 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,244 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,244 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-18T20:12:38,244 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-18T20:12:38,244 | ^~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:38,246 mgkit/utils/_sequence.c:5159:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-18T20:12:38,246 5159 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-18T20:12:38,247 | ^ 2021-07-18T20:12:38,247 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-18T20:12:38,247 from /usr/include/python3.9/Python.h:97, 2021-07-18T20:12:38,247 from mgkit/utils/_sequence.c:16: 2021-07-18T20:12:38,247 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-18T20:12:38,247 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-18T20:12:38,247 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-18T20:12:44,875 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/mgkit/utils/_sequence.o -o build/lib.linux-armv7l-3.9/mgkit/utils/_sequence.cpython-39-arm-linux-gnueabihf.so 2021-07-18T20:12:45,013 running build_scripts 2021-07-18T20:12:45,014 creating build/scripts-3.9 2021-07-18T20:12:45,016 copying scripts/download-taxonomy.sh -> build/scripts-3.9 2021-07-18T20:12:45,018 copying scripts/download-uniprot-taxa.sh -> build/scripts-3.9 2021-07-18T20:12:45,020 copying scripts/download-ncbi-taxa.sh -> build/scripts-3.9 2021-07-18T20:12:45,023 copying scripts/sort-gff.sh -> build/scripts-3.9 2021-07-18T20:12:45,024 changing mode of build/scripts-3.9/sort-gff.sh from 644 to 755 2021-07-18T20:12:45,035 installing to build/bdist.linux-armv7l/wheel 2021-07-18T20:12:45,035 running install 2021-07-18T20:12:45,036 running install_lib 2021-07-18T20:12:45,042 creating build/bdist.linux-armv7l 2021-07-18T20:12:45,042 creating build/bdist.linux-armv7l/wheel 2021-07-18T20:12:45,044 creating build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,045 creating build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,046 copying build/lib.linux-armv7l-3.9/mgkit/mappings/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,048 copying build/lib.linux-armv7l-3.9/mgkit/mappings/eggnog.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,050 copying build/lib.linux-armv7l-3.9/mgkit/mappings/cazy.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,052 copying build/lib.linux-armv7l-3.9/mgkit/mappings/pandas_map.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,054 copying build/lib.linux-armv7l-3.9/mgkit/mappings/enzyme.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,056 copying build/lib.linux-armv7l-3.9/mgkit/mappings/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,058 copying build/lib.linux-armv7l-3.9/mgkit/mappings/go.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,059 copying build/lib.linux-armv7l-3.9/mgkit/mappings/taxon.py -> build/bdist.linux-armv7l/wheel/mgkit/mappings 2021-07-18T20:12:45,061 copying build/lib.linux-armv7l-3.9/mgkit/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,063 copying build/lib.linux-armv7l-3.9/mgkit/align.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,066 copying build/lib.linux-armv7l-3.9/mgkit/logger.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,068 creating build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-18T20:12:45,069 copying build/lib.linux-armv7l-3.9/mgkit/db/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-18T20:12:45,071 copying build/lib.linux-armv7l-3.9/mgkit/db/dbm.py -> build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-18T20:12:45,073 copying build/lib.linux-armv7l-3.9/mgkit/db/mongo.py -> build/bdist.linux-armv7l/wheel/mgkit/db 2021-07-18T20:12:45,076 creating build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,077 copying build/lib.linux-armv7l-3.9/mgkit/filter/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,079 copying build/lib.linux-armv7l-3.9/mgkit/filter/reads.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,081 copying build/lib.linux-armv7l-3.9/mgkit/filter/common.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,082 copying build/lib.linux-armv7l-3.9/mgkit/filter/gff.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,085 copying build/lib.linux-armv7l-3.9/mgkit/filter/lists.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,087 copying build/lib.linux-armv7l-3.9/mgkit/filter/taxon.py -> build/bdist.linux-armv7l/wheel/mgkit/filter 2021-07-18T20:12:45,090 creating build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,090 copying build/lib.linux-armv7l-3.9/mgkit/snps/conv_func.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,093 copying build/lib.linux-armv7l-3.9/mgkit/snps/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,095 copying build/lib.linux-armv7l-3.9/mgkit/snps/filter.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,097 copying build/lib.linux-armv7l-3.9/mgkit/snps/classes.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,100 copying build/lib.linux-armv7l-3.9/mgkit/snps/funcs.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,103 copying build/lib.linux-armv7l-3.9/mgkit/snps/mapper.py -> build/bdist.linux-armv7l/wheel/mgkit/snps 2021-07-18T20:12:45,105 copying build/lib.linux-armv7l-3.9/mgkit/simple_cache.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,107 creating build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,108 copying build/lib.linux-armv7l-3.9/mgkit/io/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,110 copying build/lib.linux-armv7l-3.9/mgkit/io/gff.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,114 copying build/lib.linux-armv7l-3.9/mgkit/io/snpdat.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,117 copying build/lib.linux-armv7l-3.9/mgkit/io/fastq.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,120 copying build/lib.linux-armv7l-3.9/mgkit/io/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,122 copying build/lib.linux-armv7l-3.9/mgkit/io/fasta.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,125 copying build/lib.linux-armv7l-3.9/mgkit/io/blast.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,127 copying build/lib.linux-armv7l-3.9/mgkit/io/uniprot.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,129 copying build/lib.linux-armv7l-3.9/mgkit/io/glimmer.py -> build/bdist.linux-armv7l/wheel/mgkit/io 2021-07-18T20:12:45,131 copying build/lib.linux-armv7l-3.9/mgkit/graphs.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,135 creating build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,136 copying build/lib.linux-armv7l-3.9/mgkit/plots/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,138 copying build/lib.linux-armv7l-3.9/mgkit/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,141 copying build/lib.linux-armv7l-3.9/mgkit/plots/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,143 copying build/lib.linux-armv7l-3.9/mgkit/plots/boxplot.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,145 copying build/lib.linux-armv7l-3.9/mgkit/plots/abund.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,148 copying build/lib.linux-armv7l-3.9/mgkit/plots/colors.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,150 copying build/lib.linux-armv7l-3.9/mgkit/plots/unused.py -> build/bdist.linux-armv7l/wheel/mgkit/plots 2021-07-18T20:12:45,152 copying build/lib.linux-armv7l-3.9/mgkit/kegg.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,156 creating build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-18T20:12:45,157 copying build/lib.linux-armv7l-3.9/mgkit/net/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-18T20:12:45,159 copying build/lib.linux-armv7l-3.9/mgkit/net/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-18T20:12:45,161 copying build/lib.linux-armv7l-3.9/mgkit/net/embl.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-18T20:12:45,163 copying build/lib.linux-armv7l-3.9/mgkit/net/uniprot.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-18T20:12:45,166 copying build/lib.linux-armv7l-3.9/mgkit/net/pfam.py -> build/bdist.linux-armv7l/wheel/mgkit/net 2021-07-18T20:12:45,169 creating build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,170 copying build/lib.linux-armv7l-3.9/mgkit/workflow/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,172 copying build/lib.linux-armv7l-3.9/mgkit/workflow/add_gff_info.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,176 copying build/lib.linux-armv7l-3.9/mgkit/workflow/taxon_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,179 copying build/lib.linux-armv7l-3.9/mgkit/workflow/edit_gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,182 copying build/lib.linux-armv7l-3.9/mgkit/workflow/filter_gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,185 copying build/lib.linux-armv7l-3.9/mgkit/workflow/sampling_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,188 copying build/lib.linux-armv7l-3.9/mgkit/workflow/fasta_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,190 copying build/lib.linux-armv7l-3.9/mgkit/workflow/utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,192 copying build/lib.linux-armv7l-3.9/mgkit/workflow/fastq_utils.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,194 copying build/lib.linux-armv7l-3.9/mgkit/workflow/snp_parser.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,197 copying build/lib.linux-armv7l-3.9/mgkit/workflow/json2gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,199 copying build/lib.linux-armv7l-3.9/mgkit/workflow/pnps_gen.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,202 copying build/lib.linux-armv7l-3.9/mgkit/workflow/blast2gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,204 copying build/lib.linux-armv7l-3.9/mgkit/workflow/hmmer2gff.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,207 copying build/lib.linux-armv7l-3.9/mgkit/workflow/extract_gff_info.py -> build/bdist.linux-armv7l/wheel/mgkit/workflow 2021-07-18T20:12:45,210 creating build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,211 copying build/lib.linux-armv7l-3.9/mgkit/utils/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,213 copying build/lib.linux-armv7l-3.9/mgkit/utils/_sequence.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,227 copying build/lib.linux-armv7l-3.9/mgkit/utils/common.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,230 copying build/lib.linux-armv7l-3.9/mgkit/utils/sequence.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,234 copying build/lib.linux-armv7l-3.9/mgkit/utils/dictionary.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,237 copying build/lib.linux-armv7l-3.9/mgkit/utils/trans_tables.py -> build/bdist.linux-armv7l/wheel/mgkit/utils 2021-07-18T20:12:45,240 creating build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-18T20:12:45,241 copying build/lib.linux-armv7l-3.9/mgkit/counts/__init__.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-18T20:12:45,243 copying build/lib.linux-armv7l-3.9/mgkit/counts/glm.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-18T20:12:45,246 copying build/lib.linux-armv7l-3.9/mgkit/counts/func.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-18T20:12:45,250 copying build/lib.linux-armv7l-3.9/mgkit/counts/scaling.py -> build/bdist.linux-armv7l/wheel/mgkit/counts 2021-07-18T20:12:45,252 copying build/lib.linux-armv7l-3.9/mgkit/taxon.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,256 copying build/lib.linux-armv7l-3.9/mgkit/consts.py -> build/bdist.linux-armv7l/wheel/mgkit 2021-07-18T20:12:45,258 running install_egg_info 2021-07-18T20:12:45,271 running egg_info 2021-07-18T20:12:45,272 writing mgkit.egg-info/PKG-INFO 2021-07-18T20:12:45,275 writing dependency_links to mgkit.egg-info/dependency_links.txt 2021-07-18T20:12:45,277 writing entry points to mgkit.egg-info/entry_points.txt 2021-07-18T20:12:45,278 writing requirements to mgkit.egg-info/requires.txt 2021-07-18T20:12:45,280 writing top-level names to mgkit.egg-info/top_level.txt 2021-07-18T20:12:45,329 reading manifest file 'mgkit.egg-info/SOURCES.txt' 2021-07-18T20:12:45,363 reading manifest template 'MANIFEST.in' 2021-07-18T20:12:45,423 warning: no previously-included files matching '*' found under directory 'docs/build' 2021-07-18T20:12:45,424 warning: manifest_maker: MANIFEST.in, line 3: 'recursive-exclude' expects ... 2021-07-18T20:12:45,426 warning: no previously-included files matching '*' found under directory 'docs/source/pipeline/tutorial-data/' 2021-07-18T20:12:45,468 warning: no previously-included files matching '*' found under directory 'tests/mg_data' 2021-07-18T20:12:45,470 warning: no previously-included files matching '*.gz' found under directory 'docs/source/examples/db' 2021-07-18T20:12:45,472 warning: no previously-included files matching 'asse*' found under directory 'docs/source/examples/db' 2021-07-18T20:12:45,473 warning: no previously-included files matching 'gff-dbm' found under directory 'docs/source/examples/db' 2021-07-18T20:12:45,475 warning: no previously-included files matching '.DS_Store' found under directory 'docs' 2021-07-18T20:12:45,476 warning: no previously-included files matching '__MACOSX' found under directory '.' 2021-07-18T20:12:45,478 warning: no previously-included files matching 'tutorial-*data*' found under directory 'docs/source/pipeline/' 2021-07-18T20:12:45,478 adding license file 'LICENSE.txt' 2021-07-18T20:12:45,493 writing manifest file 'mgkit.egg-info/SOURCES.txt' 2021-07-18T20:12:45,496 Copying mgkit.egg-info to build/bdist.linux-armv7l/wheel/mgkit-0.5.2-py3.9.egg-info 2021-07-18T20:12:45,508 running install_scripts 2021-07-18T20:12:45,566 creating build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data 2021-07-18T20:12:45,567 creating build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts 2021-07-18T20:12:45,568 copying build/scripts-3.9/download-taxonomy.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts 2021-07-18T20:12:45,570 copying build/scripts-3.9/download-uniprot-taxa.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts 2021-07-18T20:12:45,572 copying build/scripts-3.9/download-ncbi-taxa.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts 2021-07-18T20:12:45,574 copying build/scripts-3.9/sort-gff.sh -> build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts 2021-07-18T20:12:45,576 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts/download-taxonomy.sh to 755 2021-07-18T20:12:45,577 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts/download-uniprot-taxa.sh to 755 2021-07-18T20:12:45,577 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts/download-ncbi-taxa.sh to 755 2021-07-18T20:12:45,578 changing mode of build/bdist.linux-armv7l/wheel/mgkit-0.5.2.data/scripts/sort-gff.sh to 755 2021-07-18T20:12:45,618 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2021-07-18T20:12:45,625 creating build/bdist.linux-armv7l/wheel/mgkit-0.5.2.dist-info/WHEEL 2021-07-18T20:12:45,628 creating '/tmp/pip-wheel-doayo720/mgkit-0.5.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-18T20:12:45,632 adding 'mgkit/__init__.py' 2021-07-18T20:12:45,635 adding 'mgkit/align.py' 2021-07-18T20:12:45,637 adding 'mgkit/consts.py' 2021-07-18T20:12:45,641 adding 'mgkit/graphs.py' 2021-07-18T20:12:45,645 adding 'mgkit/kegg.py' 2021-07-18T20:12:45,647 adding 'mgkit/logger.py' 2021-07-18T20:12:45,648 adding 'mgkit/simple_cache.py' 2021-07-18T20:12:45,654 adding 'mgkit/taxon.py' 2021-07-18T20:12:45,656 adding 'mgkit/counts/__init__.py' 2021-07-18T20:12:45,660 adding 'mgkit/counts/func.py' 2021-07-18T20:12:45,662 adding 'mgkit/counts/glm.py' 2021-07-18T20:12:45,664 adding 'mgkit/counts/scaling.py' 2021-07-18T20:12:45,665 adding 'mgkit/db/__init__.py' 2021-07-18T20:12:45,667 adding 'mgkit/db/dbm.py' 2021-07-18T20:12:45,669 adding 'mgkit/db/mongo.py' 2021-07-18T20:12:45,671 adding 'mgkit/filter/__init__.py' 2021-07-18T20:12:45,672 adding 'mgkit/filter/common.py' 2021-07-18T20:12:45,674 adding 'mgkit/filter/gff.py' 2021-07-18T20:12:45,675 adding 'mgkit/filter/lists.py' 2021-07-18T20:12:45,677 adding 'mgkit/filter/reads.py' 2021-07-18T20:12:45,678 adding 'mgkit/filter/taxon.py' 2021-07-18T20:12:45,680 adding 'mgkit/io/__init__.py' 2021-07-18T20:12:45,682 adding 'mgkit/io/blast.py' 2021-07-18T20:12:45,684 adding 'mgkit/io/fasta.py' 2021-07-18T20:12:45,686 adding 'mgkit/io/fastq.py' 2021-07-18T20:12:45,696 adding 'mgkit/io/gff.py' 2021-07-18T20:12:45,698 adding 'mgkit/io/glimmer.py' 2021-07-18T20:12:45,700 adding 'mgkit/io/snpdat.py' 2021-07-18T20:12:45,702 adding 'mgkit/io/uniprot.py' 2021-07-18T20:12:45,704 adding 'mgkit/io/utils.py' 2021-07-18T20:12:45,706 adding 'mgkit/mappings/__init__.py' 2021-07-18T20:12:45,707 adding 'mgkit/mappings/cazy.py' 2021-07-18T20:12:45,709 adding 'mgkit/mappings/eggnog.py' 2021-07-18T20:12:45,711 adding 'mgkit/mappings/enzyme.py' 2021-07-18T20:12:45,713 adding 'mgkit/mappings/go.py' 2021-07-18T20:12:45,714 adding 'mgkit/mappings/pandas_map.py' 2021-07-18T20:12:45,716 adding 'mgkit/mappings/taxon.py' 2021-07-18T20:12:45,717 adding 'mgkit/mappings/utils.py' 2021-07-18T20:12:45,719 adding 'mgkit/net/__init__.py' 2021-07-18T20:12:45,721 adding 'mgkit/net/embl.py' 2021-07-18T20:12:45,723 adding 'mgkit/net/pfam.py' 2021-07-18T20:12:45,725 adding 'mgkit/net/uniprot.py' 2021-07-18T20:12:45,727 adding 'mgkit/net/utils.py' 2021-07-18T20:12:45,729 adding 'mgkit/plots/__init__.py' 2021-07-18T20:12:45,731 adding 'mgkit/plots/abund.py' 2021-07-18T20:12:45,734 adding 'mgkit/plots/boxplot.py' 2021-07-18T20:12:45,735 adding 'mgkit/plots/colors.py' 2021-07-18T20:12:45,737 adding 'mgkit/plots/heatmap.py' 2021-07-18T20:12:45,740 adding 'mgkit/plots/unused.py' 2021-07-18T20:12:45,741 adding 'mgkit/plots/utils.py' 2021-07-18T20:12:45,744 adding 'mgkit/snps/__init__.py' 2021-07-18T20:12:45,746 adding 'mgkit/snps/classes.py' 2021-07-18T20:12:45,748 adding 'mgkit/snps/conv_func.py' 2021-07-18T20:12:45,750 adding 'mgkit/snps/filter.py' 2021-07-18T20:12:45,752 adding 'mgkit/snps/funcs.py' 2021-07-18T20:12:45,754 adding 'mgkit/snps/mapper.py' 2021-07-18T20:12:45,756 adding 'mgkit/utils/__init__.py' 2021-07-18T20:12:45,855 adding 'mgkit/utils/_sequence.cpython-39-arm-linux-gnueabihf.so' 2021-07-18T20:12:45,861 adding 'mgkit/utils/common.py' 2021-07-18T20:12:45,864 adding 'mgkit/utils/dictionary.py' 2021-07-18T20:12:45,868 adding 'mgkit/utils/sequence.py' 2021-07-18T20:12:45,870 adding 'mgkit/utils/trans_tables.py' 2021-07-18T20:12:45,872 adding 'mgkit/workflow/__init__.py' 2021-07-18T20:12:45,877 adding 'mgkit/workflow/add_gff_info.py' 2021-07-18T20:12:45,880 adding 'mgkit/workflow/blast2gff.py' 2021-07-18T20:12:45,882 adding 'mgkit/workflow/edit_gff.py' 2021-07-18T20:12:45,884 adding 'mgkit/workflow/extract_gff_info.py' 2021-07-18T20:12:45,886 adding 'mgkit/workflow/fasta_utils.py' 2021-07-18T20:12:45,888 adding 'mgkit/workflow/fastq_utils.py' 2021-07-18T20:12:45,891 adding 'mgkit/workflow/filter_gff.py' 2021-07-18T20:12:45,893 adding 'mgkit/workflow/hmmer2gff.py' 2021-07-18T20:12:45,895 adding 'mgkit/workflow/json2gff.py' 2021-07-18T20:12:45,897 adding 'mgkit/workflow/pnps_gen.py' 2021-07-18T20:12:45,899 adding 'mgkit/workflow/sampling_utils.py' 2021-07-18T20:12:45,902 adding 'mgkit/workflow/snp_parser.py' 2021-07-18T20:12:45,906 adding 'mgkit/workflow/taxon_utils.py' 2021-07-18T20:12:45,907 adding 'mgkit/workflow/utils.py' 2021-07-18T20:12:45,910 adding 'mgkit-0.5.2.data/scripts/download-ncbi-taxa.sh' 2021-07-18T20:12:45,912 adding 'mgkit-0.5.2.data/scripts/download-taxonomy.sh' 2021-07-18T20:12:45,913 adding 'mgkit-0.5.2.data/scripts/download-uniprot-taxa.sh' 2021-07-18T20:12:45,915 adding 'mgkit-0.5.2.data/scripts/sort-gff.sh' 2021-07-18T20:12:45,927 adding 'mgkit-0.5.2.dist-info/LICENSE.txt' 2021-07-18T20:12:45,929 adding 'mgkit-0.5.2.dist-info/METADATA' 2021-07-18T20:12:45,931 adding 'mgkit-0.5.2.dist-info/WHEEL' 2021-07-18T20:12:45,932 adding 'mgkit-0.5.2.dist-info/entry_points.txt' 2021-07-18T20:12:45,934 adding 'mgkit-0.5.2.dist-info/top_level.txt' 2021-07-18T20:12:45,936 adding 'mgkit-0.5.2.dist-info/RECORD' 2021-07-18T20:12:45,949 removing build/bdist.linux-armv7l/wheel 2021-07-18T20:12:46,072 Building wheel for mgkit (setup.py): finished with status 'done' 2021-07-18T20:12:46,079 Created wheel for mgkit: filename=mgkit-0.5.2-cp39-cp39-linux_armv7l.whl size=370999 sha256=6b0244bbaa64d9b27b24edf0599cef2eb4c1ce86a7a887b17baf21ab4c48b66e 2021-07-18T20:12:46,079 Stored in directory: /tmp/pip-ephem-wheel-cache-awjbkc_m/wheels/a1/c1/d8/4f56eb672be1be9e514d78723594200804c4bb8c9a06df3149 2021-07-18T20:12:46,093 Successfully built mgkit 2021-07-18T20:12:46,112 Removed build tracker: '/tmp/pip-req-tracker-7a3jtbs3'