2021-07-19T13:39:13,326 Created temporary directory: /tmp/pip-ephem-wheel-cache-hwtv_kzm
2021-07-19T13:39:13,328 Created temporary directory: /tmp/pip-req-tracker-nobinq5z
2021-07-19T13:39:13,329 Initialized build tracking at /tmp/pip-req-tracker-nobinq5z
2021-07-19T13:39:13,329 Created build tracker: /tmp/pip-req-tracker-nobinq5z
2021-07-19T13:39:13,329 Entered build tracker: /tmp/pip-req-tracker-nobinq5z
2021-07-19T13:39:13,330 Created temporary directory: /tmp/pip-wheel-i8zkxksd
2021-07-19T13:39:13,357 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-07-19T13:39:13,360 2 location(s) to search for versions of gdstk:
2021-07-19T13:39:13,360 * https://pypi.org/simple/gdstk/
2021-07-19T13:39:13,360 * https://www.piwheels.org/simple/gdstk/
2021-07-19T13:39:13,360 Fetching project page and analyzing links: https://pypi.org/simple/gdstk/
2021-07-19T13:39:13,361 Getting page https://pypi.org/simple/gdstk/
2021-07-19T13:39:13,362 Found index url https://pypi.org/simple
2021-07-19T13:39:13,553   Found link https://files.pythonhosted.org/packages/b4/10/e40f0cabb669824a2c520367c926a6f1cbcd861a1ac26325771ff35181a9/gdstk-0.1.0.tar.gz#sha256=1c139cc5d754ada5d93ec35ed5cb914490fd4bd75f4cd536dcbe71683cac3350 (from https://pypi.org/simple/gdstk/), version: 0.1.0
2021-07-19T13:39:13,553   Found link https://files.pythonhosted.org/packages/be/04/1fd2d4e056c7e9027bcd3c165426fe1d1f7a921a6a92f397d4aa2cf3809e/gdstk-0.1.1.tar.gz#sha256=d5ed69fce359c25d65f9e61fe302496931ae32bca925b9cb6b359dddc5db03d1 (from https://pypi.org/simple/gdstk/), version: 0.1.1
2021-07-19T13:39:13,554   Found link https://files.pythonhosted.org/packages/e0/29/8fc443459726849e7d35e7f258a969494de03e6f610bd788ae5226852057/gdstk-0.2.0.tar.gz#sha256=99f4757091d854d822aa153c0a1877ccb17351a81116a778072381bc7e69052a (from https://pypi.org/simple/gdstk/), version: 0.2.0
2021-07-19T13:39:13,554   Found link https://files.pythonhosted.org/packages/d9/98/0d0256fe6e50545bc0a4b7ef343f31e6585c9419ce1b1747de8126f34d4b/gdstk-0.3.0.tar.gz#sha256=3fed7296ba702015499927eaa8b9acfc4eaa36ebd0be1d2bd59328b049fa2d89 (from https://pypi.org/simple/gdstk/), version: 0.3.0
2021-07-19T13:39:13,555   Found link https://files.pythonhosted.org/packages/fa/e5/6802ec61bdace1850b90ec9099469ee9d3c8bdd03c172d960bb224d7fc98/gdstk-0.3.1.tar.gz#sha256=a2bc3ed4ea05ddb8e6a50da562065c98a307421425a27284c7bdd42cf7508929 (from https://pypi.org/simple/gdstk/), version: 0.3.1
2021-07-19T13:39:13,555   Found link https://files.pythonhosted.org/packages/8f/9f/989dce304a06abfc9b7a5a10a25b7fb30ea13bf1cdd1157dc954ee71d3d5/gdstk-0.3.2.tar.gz#sha256=9e39d9f34f64a48e43654c26f8a66acdd318ee081931f018e0007b81219268af (from https://pypi.org/simple/gdstk/), version: 0.3.2
2021-07-19T13:39:13,555   Found link https://files.pythonhosted.org/packages/7f/68/4e805bc0a1114cf6f3a0abd0b14bd0e1a2c0bcf83cbf832d42d9432cf40e/gdstk-0.4.0.tar.gz#sha256=27df765a95ad97a5a1164850ca82a61a5c6e5e6d4e289684a808ef3ba0830017 (from https://pypi.org/simple/gdstk/), version: 0.4.0
2021-07-19T13:39:13,555   Found link https://files.pythonhosted.org/packages/b4/f5/37f580406305304b5a15d99032fad28fa6a3cd8eaf48dd39615fec283409/gdstk-0.5.0.tar.gz#sha256=ac28fcb4e58bbbe8348dcc64e983bb92dc1cb77775c768acc6a9da901b48fe8c (from https://pypi.org/simple/gdstk/), version: 0.5.0
2021-07-19T13:39:13,556   Found link https://files.pythonhosted.org/packages/76/15/1b400ae9f540f91899f8314ef54023b0c2e3545809bb060376eb9018b9c0/gdstk-0.6.0.tar.gz#sha256=d6ea26878128a68ee23118aa907a37593371e9b932cf27dac9713765b7f00bc2 (from https://pypi.org/simple/gdstk/), version: 0.6.0
2021-07-19T13:39:13,556   Found link https://files.pythonhosted.org/packages/48/09/adf49db0dadaea9286e9bc18858249958684dec60e75cde03c2da9804afd/gdstk-0.6.1.tar.gz#sha256=417fac759c621c449e810621b6894f5c8fa167622ef8390b2a7fa2049b58732e (from https://pypi.org/simple/gdstk/), version: 0.6.1
2021-07-19T13:39:13,556 Fetching project page and analyzing links: https://www.piwheels.org/simple/gdstk/
2021-07-19T13:39:13,556 Getting page https://www.piwheels.org/simple/gdstk/
2021-07-19T13:39:13,557 Found index url https://www.piwheels.org/simple
2021-07-19T13:39:13,739   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.1.1-cp37-cp37m-linux_armv6l.whl#sha256=e6e148ff2ff7e3a3ea29e185270222e246355ac125241e0b842d6739a9550a51 (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,740   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.1.1-cp37-cp37m-linux_armv7l.whl#sha256=e6e148ff2ff7e3a3ea29e185270222e246355ac125241e0b842d6739a9550a51 (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,740   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=b0fed5f409b9b33d9cfce9a094d6c16c05111f523d07675fa7aba73ea1fd7faa (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,741   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=b0fed5f409b9b33d9cfce9a094d6c16c05111f523d07675fa7aba73ea1fd7faa (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,741   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=b8b9c845eec23eecc60657c1888fd8087de167f59aa5090948d155ca9f3546ab (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,741   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.5.0-cp37-cp37m-linux_armv7l.whl#sha256=b8b9c845eec23eecc60657c1888fd8087de167f59aa5090948d155ca9f3546ab (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,741   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.6.0-cp37-cp37m-linux_armv6l.whl#sha256=450f4ba89e378de7101ac1fb02d650c11405d7410e783ee98720241baad73f7f (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,742   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.6.0-cp37-cp37m-linux_armv7l.whl#sha256=450f4ba89e378de7101ac1fb02d650c11405d7410e783ee98720241baad73f7f (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,742   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.6.1-cp37-cp37m-linux_armv6l.whl#sha256=d830e142e3ec8b5fedd0c3c6dc7f5939ea309a2af44da6cf2444c7d5b7a4e3da (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,742   Skipping link: No binaries permitted for gdstk: https://www.piwheels.org/simple/gdstk/gdstk-0.6.1-cp37-cp37m-linux_armv7l.whl#sha256=d830e142e3ec8b5fedd0c3c6dc7f5939ea309a2af44da6cf2444c7d5b7a4e3da (from https://www.piwheels.org/simple/gdstk/)
2021-07-19T13:39:13,742 Skipping link: not a file: https://www.piwheels.org/simple/gdstk/
2021-07-19T13:39:13,743 Skipping link: not a file: https://pypi.org/simple/gdstk/
2021-07-19T13:39:13,767 Given no hashes to check 1 links for project 'gdstk': discarding no candidates
2021-07-19T13:39:13,785 Collecting gdstk==0.1.0
2021-07-19T13:39:13,787   Created temporary directory: /tmp/pip-unpack-89k5vteo
2021-07-19T13:39:13,986   Downloading gdstk-0.1.0.tar.gz (115 kB)
2021-07-19T13:39:14,188   Added gdstk==0.1.0 from https://files.pythonhosted.org/packages/b4/10/e40f0cabb669824a2c520367c926a6f1cbcd861a1ac26325771ff35181a9/gdstk-0.1.0.tar.gz#sha256=1c139cc5d754ada5d93ec35ed5cb914490fd4bd75f4cd536dcbe71683cac3350 to build tracker '/tmp/pip-req-tracker-nobinq5z'
2021-07-19T13:39:14,190     Running setup.py (path:/tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5/setup.py) egg_info for package gdstk
2021-07-19T13:39:14,190     Created temporary directory: /tmp/pip-pip-egg-info-llnaq_c3
2021-07-19T13:39:14,191     Running command python setup.py egg_info
2021-07-19T13:39:15,881     running egg_info
2021-07-19T13:39:15,883     creating /tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info
2021-07-19T13:39:15,890     writing /tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/PKG-INFO
2021-07-19T13:39:15,894     writing dependency_links to /tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/dependency_links.txt
2021-07-19T13:39:15,895     writing requirements to /tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/requires.txt
2021-07-19T13:39:15,896     writing top-level names to /tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/top_level.txt
2021-07-19T13:39:15,898     writing manifest file '/tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/SOURCES.txt'
2021-07-19T13:39:15,943     reading manifest file '/tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/SOURCES.txt'
2021-07-19T13:39:15,946     reading manifest template 'MANIFEST.in'
2021-07-19T13:39:15,953     adding license file 'LICENSE'
2021-07-19T13:39:15,958     writing manifest file '/tmp/pip-pip-egg-info-llnaq_c3/gdstk.egg-info/SOURCES.txt'
2021-07-19T13:39:16,075   Source in /tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5 has version 0.1.0, which satisfies requirement gdstk==0.1.0 from https://files.pythonhosted.org/packages/b4/10/e40f0cabb669824a2c520367c926a6f1cbcd861a1ac26325771ff35181a9/gdstk-0.1.0.tar.gz#sha256=1c139cc5d754ada5d93ec35ed5cb914490fd4bd75f4cd536dcbe71683cac3350
2021-07-19T13:39:16,076   Removed gdstk==0.1.0 from https://files.pythonhosted.org/packages/b4/10/e40f0cabb669824a2c520367c926a6f1cbcd861a1ac26325771ff35181a9/gdstk-0.1.0.tar.gz#sha256=1c139cc5d754ada5d93ec35ed5cb914490fd4bd75f4cd536dcbe71683cac3350 from build tracker '/tmp/pip-req-tracker-nobinq5z'
2021-07-19T13:39:16,081 Created temporary directory: /tmp/pip-unpack-wsoarmrh
2021-07-19T13:39:16,081 Building wheels for collected packages: gdstk
2021-07-19T13:39:16,085   Created temporary directory: /tmp/pip-wheel-fo2hdjl_
2021-07-19T13:39:16,086   Building wheel for gdstk (setup.py): started
2021-07-19T13:39:16,086   Destination directory: /tmp/pip-wheel-fo2hdjl_
2021-07-19T13:39:16,086   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fo2hdjl_
2021-07-19T13:39:17,738   running bdist_wheel
2021-07-19T13:39:17,744   running build
2021-07-19T13:39:17,744   running build_ext
2021-07-19T13:39:17,747   cmake /tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5 -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5/build/temp.linux-armv7l-3.9 -DCMAKE_BUILD_TYPE=Release
2021-07-19T13:39:18,113   -- The C compiler identification is GNU 10.2.1
2021-07-19T13:39:18,450   -- The CXX compiler identification is GNU 10.2.1
2021-07-19T13:39:18,503   -- Detecting C compiler ABI info
2021-07-19T13:39:18,922   -- Detecting C compiler ABI info - done
2021-07-19T13:39:18,978   -- Check for working C compiler: /usr/bin/cc - skipped
2021-07-19T13:39:18,979   -- Detecting C compile features
2021-07-19T13:39:18,981   -- Detecting C compile features - done
2021-07-19T13:39:19,006   -- Detecting CXX compiler ABI info
2021-07-19T13:39:19,472   -- Detecting CXX compiler ABI info - done
2021-07-19T13:39:19,527   -- Check for working CXX compiler: /usr/bin/c++ - skipped
2021-07-19T13:39:19,528   -- Detecting CXX compile features
2021-07-19T13:39:19,531   -- Detecting CXX compile features - done
2021-07-19T13:39:19,576   -- Looking for sgemm_
2021-07-19T13:39:20,000   -- Looking for sgemm_ - not found
2021-07-19T13:39:20,011   -- Looking for pthread.h
2021-07-19T13:39:20,457   -- Looking for pthread.h - found
2021-07-19T13:39:20,460   -- Performing Test CMAKE_HAVE_LIBC_PTHREAD
2021-07-19T13:39:20,909   -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
2021-07-19T13:39:20,910   -- Looking for pthread_create in pthreads
2021-07-19T13:39:21,263   -- Looking for pthread_create in pthreads - not found
2021-07-19T13:39:21,264   -- Looking for pthread_create in pthread
2021-07-19T13:39:21,678   -- Looking for pthread_create in pthread - found
2021-07-19T13:39:21,684   -- Found Threads: TRUE
2021-07-19T13:39:21,800   -- Looking for dgemm_
2021-07-19T13:39:22,319   -- Looking for dgemm_ - found
2021-07-19T13:39:22,323   -- Found BLAS: /usr/lib/arm-linux-gnueabihf/libblas.so;/usr/lib/arm-linux-gnueabihf/libf77blas.so;/usr/lib/arm-linux-gnueabihf/libatlas.so
2021-07-19T13:39:22,336   -- Looking for cheev_
2021-07-19T13:39:22,776   -- Looking for cheev_ - not found
2021-07-19T13:39:22,812   -- Looking for cheev_
2021-07-19T13:39:23,315   -- Looking for cheev_ - found
2021-07-19T13:39:23,317   -- A library with LAPACK API found.
2021-07-19T13:39:23,323   -- Configuring done
2021-07-19T13:39:23,334   CMake Error at CMakeLists.txt:33 (add_library):
2021-07-19T13:39:23,334     Cannot find source file:

2021-07-19T13:39:23,334       src/clipperlib

2021-07-19T13:39:23,335     Tried extensions .c .C .c++ .cc .cpp .cxx .cu .m .M .mm .h .hh .h++ .hm
2021-07-19T13:39:23,335     .hpp .hxx .in .txx


2021-07-19T13:39:23,335   CMake Error at CMakeLists.txt:33 (add_library):
2021-07-19T13:39:23,335     No SOURCES given to target: gdstk


2021-07-19T13:39:23,336   CMake Generate step failed.  Build files cannot be regenerated correctly.
2021-07-19T13:39:23,348   error: command '/usr/bin/cmake' failed with exit code 1
2021-07-19T13:39:23,463   Building wheel for gdstk (setup.py): finished with status 'error'
2021-07-19T13:39:23,464   ERROR: Failed building wheel for gdstk
2021-07-19T13:39:23,464   Running setup.py clean for gdstk
2021-07-19T13:39:23,465   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-i8zkxksd/gdstk_53cfd8d8f36c4df89e6bb05b91b989b5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-19T13:39:25,064   running clean
2021-07-19T13:39:25,066   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-19T13:39:25,078   'build/lib.linux-armv7l-3.9' does not exist -- can't clean it
2021-07-19T13:39:25,079   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-19T13:39:25,079   'build/scripts-3.9' does not exist -- can't clean it
2021-07-19T13:39:25,079   removing 'build'
2021-07-19T13:39:25,179 Failed to build gdstk
2021-07-19T13:39:25,180 ERROR: Failed to build one or more wheels
2021-07-19T13:39:25,180 Exception information:
2021-07-19T13:39:25,180 Traceback (most recent call last):
2021-07-19T13:39:25,180   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-19T13:39:25,180     status = self.run(options, args)
2021-07-19T13:39:25,180   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-19T13:39:25,180     return func(self, options, args)
2021-07-19T13:39:25,180   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-19T13:39:25,180     raise CommandError(
2021-07-19T13:39:25,180 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-19T13:39:25,183 Removed build tracker: '/tmp/pip-req-tracker-nobinq5z'