2021-07-21T11:15:44,031 Created temporary directory: /tmp/pip-ephem-wheel-cache-xm1lufwx
2021-07-21T11:15:44,035 Created temporary directory: /tmp/pip-req-tracker-2ga9cqzg
2021-07-21T11:15:44,035 Initialized build tracking at /tmp/pip-req-tracker-2ga9cqzg
2021-07-21T11:15:44,035 Created build tracker: /tmp/pip-req-tracker-2ga9cqzg
2021-07-21T11:15:44,035 Entered build tracker: /tmp/pip-req-tracker-2ga9cqzg
2021-07-21T11:15:44,036 Created temporary directory: /tmp/pip-wheel-avacxsi2
2021-07-21T11:15:44,068 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-07-21T11:15:44,070 2 location(s) to search for versions of gemmi:
2021-07-21T11:15:44,070 * https://pypi.org/simple/gemmi/
2021-07-21T11:15:44,070 * https://www.piwheels.org/simple/gemmi/
2021-07-21T11:15:44,071 Fetching project page and analyzing links: https://pypi.org/simple/gemmi/
2021-07-21T11:15:44,071 Getting page https://pypi.org/simple/gemmi/
2021-07-21T11:15:44,073 Found index url https://pypi.org/simple
2021-07-21T11:15:44,346   Found link https://files.pythonhosted.org/packages/3d/74/21e7705118e1f4ac86f03f99a71dc2ba33b8a73fef727be638ee054886e6/gemmi-0.1.2.tar.gz#sha256=2cf46e879e036f7d3bd656c59d04ffe7f3beee8ba41f2cb4475cc5b2c97154f3 (from https://pypi.org/simple/gemmi/), version: 0.1.2
2021-07-21T11:15:44,347   Found link https://files.pythonhosted.org/packages/13/89/4369460dd34f3e7f46c4ec44765cf9f79e392cf3faa8b3792285db77c61f/gemmi-0.1.3.tar.gz#sha256=238243f3814b9e2ef6aab1448a1080da90190e60e32b1d22a145f5d59b17369f (from https://pypi.org/simple/gemmi/), version: 0.1.3
2021-07-21T11:15:44,347   Found link https://files.pythonhosted.org/packages/fb/18/819ab7731075516bb422586a97a4e59313259fa60e49642e26859fe0ef76/gemmi-0.1.4.tar.gz#sha256=e1fcbb530fc2d17cea010410452db8dfa35d7971e58a5c993e3d3650fd49b2fb (from https://pypi.org/simple/gemmi/), version: 0.1.4
2021-07-21T11:15:44,347   Found link https://files.pythonhosted.org/packages/d4/d5/85a0fecb747b415fcc6e3fee9f48edab936e6339ec50736abe1dcfc0d460/gemmi-0.1.5.tar.gz#sha256=f13e5f7405269b24a790faa9620474b9f2a4ad6b31c012b85cfab559a2995d64 (from https://pypi.org/simple/gemmi/), version: 0.1.5
2021-07-21T11:15:44,348   Found link https://files.pythonhosted.org/packages/e5/96/664c971ddae50eb00ff9ee39ce8db4e3f481a1ca740583081a1a84146d39/gemmi-0.1.6.tar.gz#sha256=4b79dd9820663b9aaba54015feba8b7608508ead32d3110fc9d2739400c242fd (from https://pypi.org/simple/gemmi/), version: 0.1.6
2021-07-21T11:15:44,348   Found link https://files.pythonhosted.org/packages/e5/41/e51478a35846a23ef2764d9a36ced90e63eafd49c7a4c85559b0566c3884/gemmi-0.1.7.tar.gz#sha256=75da3d78d9f72d3d111b2a8175408b2320b9a00b97649fa3ccdc659a31c02458 (from https://pypi.org/simple/gemmi/), version: 0.1.7
2021-07-21T11:15:44,348   Found link https://files.pythonhosted.org/packages/20/bd/36cb4b950bbe78d5a4e3fd1c127100894fc97d059db57771fa1fd1ce9f2b/gemmi-0.2.0.tar.gz#sha256=c5de4d3f56fb36d5d61f8be110dc14af630ece92755f2913fa4f76fc8340f84a (from https://pypi.org/simple/gemmi/), version: 0.2.0
2021-07-21T11:15:44,348   Found link https://files.pythonhosted.org/packages/d1/2a/7cb4d0fbc88af06fe42971bfebbbefa670a156b396a9d59fb428809977c4/gemmi-0.2.1.tar.gz#sha256=8c5248edf619f86d7e64c6bf9ef931ac189c8928ae136efa28c4fb5365ffd7fa (from https://pypi.org/simple/gemmi/), version: 0.2.1
2021-07-21T11:15:44,349   Found link https://files.pythonhosted.org/packages/09/bd/2d15c8e32c28b11d3f781293a3c828834874bf0c17d193a65a0ab4e781df/gemmi-0.2.2.tar.gz#sha256=b520334b83c42384f26b0d72c0684c0964fdd913d71cffc39b7af71792fc82fc (from https://pypi.org/simple/gemmi/), version: 0.2.2
2021-07-21T11:15:44,349   Found link https://files.pythonhosted.org/packages/2b/d5/15ac654339e17b64f6c4c3d07cea51f6f329eeee1ba01ad58536279fd400/gemmi-0.2.3.tar.gz#sha256=f86691a7786eca8737bebad8401ccff021ae5b629fde9ec0729d3e22ee43e674 (from https://pypi.org/simple/gemmi/), version: 0.2.3
2021-07-21T11:15:44,349   Found link https://files.pythonhosted.org/packages/32/fa/781063687c6e47133a8c39b142a10573546153dde6f5558e9802690bb184/gemmi-0.2.4.tar.gz#sha256=38822f8d43891c8511fc480428511a3c5345751fcd660076cb547fd1fb5ffbc6 (from https://pypi.org/simple/gemmi/), version: 0.2.4
2021-07-21T11:15:44,349   Found link https://files.pythonhosted.org/packages/8b/d5/92f78ebb4734212283301730b193bd44f3ea74161bfd413939a88e976f67/gemmi-0.2.7.tar.gz#sha256=249751bec0559c678ec258926e1748baaad11cfd3b3e2fae569352f5516c44ba (from https://pypi.org/simple/gemmi/), version: 0.2.7
2021-07-21T11:15:44,350   Found link https://files.pythonhosted.org/packages/4b/4b/51d357ef35fcf27a5325426b9326498ab1482be37efbc06a92202f921407/gemmi-0.2.8.tar.gz#sha256=78279babad10cdd4491fde300892aa82711c6c587bbc85824df831082ae8bd3c (from https://pypi.org/simple/gemmi/), version: 0.2.8
2021-07-21T11:15:44,350   Found link https://files.pythonhosted.org/packages/e0/9c/6ea8ea2bbda7ab9eb8b548d899cc328aabd9cf04c720e1cd3287fcd00544/gemmi-0.3.0.tar.gz#sha256=da4f693270b50a5e1d1c7b76184bf00836ec9366ec6081d413460d2bd73a9e14 (from https://pypi.org/simple/gemmi/), version: 0.3.0
2021-07-21T11:15:44,350   Found link https://files.pythonhosted.org/packages/e5/ed/6a91e0fe126a30842c93bfa3865dab81d8383a12026c034edfdf5bf60f85/gemmi-0.3.1.tar.gz#sha256=2b9777962d56b3e0d32122757830e63a03eb281cb18abe822cd3429ddfcc56a9 (from https://pypi.org/simple/gemmi/), version: 0.3.1
2021-07-21T11:15:44,350   Found link https://files.pythonhosted.org/packages/5d/86/6cef13dcfd9b5f3101e826f35fd54088942496489b9307480185fe63d2ed/gemmi-0.3.2.tar.gz#sha256=b626f55807abf58f2510c90bcf383af50f132bb2a9ff1d6a8a53ac50a591a217 (from https://pypi.org/simple/gemmi/), version: 0.3.2
2021-07-21T11:15:44,351   Found link https://files.pythonhosted.org/packages/af/9d/ce0bdf384249da75e4584b624f5a144366a3c8eceff2dff19236aff08dd1/gemmi-0.3.3.tar.gz#sha256=c8de0da30464e49532af856e47b3815df9c042690169a85dfc3fac7c83066251 (from https://pypi.org/simple/gemmi/), version: 0.3.3
2021-07-21T11:15:44,351   Found link https://files.pythonhosted.org/packages/b3/b8/1f41f9a0849c5011cb890f89b6548c8dec1b52ee4bf28cb0ebe3728016e9/gemmi-0.3.4.tar.gz#sha256=94184ef130c341b67eddf0fbab41b57d47c36ab3a53088af315065b50e7c117c (from https://pypi.org/simple/gemmi/), version: 0.3.4
2021-07-21T11:15:44,351   Found link https://files.pythonhosted.org/packages/f4/f0/f4cd4d29e53707efccb2e6d4b2c185851dc1ef02f7aa041b9803fb1a8590/gemmi-0.3.5.tar.gz#sha256=f78b590b4594ec016dcf8b3be10b5eb23e54e2b19dbc73647da9bbf15ac4f824 (from https://pypi.org/simple/gemmi/), version: 0.3.5
2021-07-21T11:15:44,352   Found link https://files.pythonhosted.org/packages/39/b1/9ca0ad395150af606cf85a2e45c2dfaab02492d36ff264efdcf25f7479c1/gemmi-0.3.6.tar.gz#sha256=b290c9ebf03555ba308f9e65e9eaf31ae40acf89e7d9a4b5536e0096dea7d3e2 (from https://pypi.org/simple/gemmi/), version: 0.3.6
2021-07-21T11:15:44,352   Found link https://files.pythonhosted.org/packages/99/ff/0da30f43421b952256ba77edf0eee9bc0711715a4687489ee33037a1f132/gemmi-0.3.7.tar.gz#sha256=8461d66b7bf033cb20d9b62a5fe65474de09e59b90702651f2317ca1e578f451 (from https://pypi.org/simple/gemmi/), version: 0.3.7
2021-07-21T11:15:44,352   Found link https://files.pythonhosted.org/packages/06/4f/5e2e02aa93bcdf27b54f810ecda6e3d08b962d8ef27c9fa731f04523dc80/gemmi-0.3.8.tar.gz#sha256=95a3baada9756ab68f1061161fdddbe3532ffd7c70c2271256f51781e11d7dc2 (from https://pypi.org/simple/gemmi/), version: 0.3.8
2021-07-21T11:15:44,352   Found link https://files.pythonhosted.org/packages/c0/4d/7567aed9911e6f62021508d72deae27d7f1e5dcb41032c4d642c01158408/gemmi-0.4.0.post1.tar.gz#sha256=fe4aab685772be9002ae047c86282061a54a8472c41e71dc7f4e2426a26a7626 (from https://pypi.org/simple/gemmi/), version: 0.4.0.post1
2021-07-21T11:15:44,353   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f5/da/3fb440c7b946febcc4fdb3f4928b1e93b2627ccdf26d69962f3c05b8f077/gemmi-0.4.1-cp36-cp36m-win32.whl#sha256=7fd237c9df1a14c4fdb3ac71999e492d2c704924d99cbc3c56e2b3068e6732cf (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,353   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/88/8c/72cd48a1e89ad92f24e67d15545b9e3f478f256fb4729dbbb4985a0efe2f/gemmi-0.4.1-cp36-cp36m-win_amd64.whl#sha256=0e787ecd22313c52bfeae3408a3de06ec676e793822a245886bccfe5bd8cd79a (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,353   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/84/0162cc2197241200740655ebe6cfd33342ddb152feca089f98aab91f56b0/gemmi-0.4.1-cp37-cp37m-win32.whl#sha256=f818934948b41087b9e2d1fb4a14db70c822f6cf153658a649d607d098d9bfd1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,353   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/3a/c69ec458774b60d61a929ac2357d0b9c0a0b5187e55cdb75e138cefee2d3/gemmi-0.4.1-cp37-cp37m-win_amd64.whl#sha256=81d236d7ffe05be29cd3480c2821276337f661e6fcb0881c5e32c360b7be7378 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,354   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c2/a2/55410bfd6be3391475c2a005fcde251f843e0d117707dacb07bb880d2b21/gemmi-0.4.1-cp38-cp38-win32.whl#sha256=980c890ffc5034940e756a887670406939f3a95ce60493ab98cd8f2e4f2d7830 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,354   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/a4/361f66459b444340a29c1dbeb81918dccfab580f92752571a361b53c80fe/gemmi-0.4.1-cp38-cp38-win_amd64.whl#sha256=28de811e9a1c142a311cb4ed52f367788d9911de9cd17ad84566afae1ce97b15 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,354   Found link https://files.pythonhosted.org/packages/2f/d5/4ca93e1691bd8cb2d1e06ce4ff816eca300aa4e09416caf45bbb6451f013/gemmi-0.4.1.tar.gz#sha256=65f36f61e1b88913ab697bfb846553e15398ca27fac952a1d386a5d15779951b (from https://pypi.org/simple/gemmi/), version: 0.4.1
2021-07-21T11:15:44,354   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/03/599bf3752327fdbc408133daf5d6a7b950d72c4d81f20d8d3b2d8e95be85/gemmi-0.4.2-cp27-cp27m-manylinux2010_x86_64.whl#sha256=2c3fe451e560f0cb316f425afa8f95ad0138c5e14baf15bad8add3b16a002820 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,354   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/aa/f03b573d7333211fda34ad2c7dddbb4b7310fcf9caf7e938318208819049/gemmi-0.4.2-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=f7faad54418319bc8ff1b7e5b1cb4f4cbac4653f4edf528e911f040f5c9ce012 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,355   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/eb/d55b627cd8cb0f9bd3fc076afdd8b3b999316d6c4c24b6b703b97730ffab/gemmi-0.4.2-cp35-cp35m-manylinux2010_x86_64.whl#sha256=65d303507bbedb01265a59e33f9c087957fbcffe240366a802e240fa032eca1c (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,355   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/6a/fe1a65806633ea2129507b0f8b4034afdbf383e474a12152839ee50a52eb/gemmi-0.4.2-cp36-cp36m-manylinux2010_x86_64.whl#sha256=09fd610301a230cb7890f2d7f6dd7ae98ead9bc59f3fc37790f8a95dd4017eac (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,355   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/59/a4976acb0891bc600c161f08c341666daf419885f07a105e335e1aeeecb7/gemmi-0.4.2-cp36-cp36m-win32.whl#sha256=7143c3b674f428a420ac13d72fb0d327e3c842f014e2dac1fcf18453d3671d6f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,355   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/f9/0e3c3e3cbb2116fa23a1fe815542a971a5775cd7ada9d02ffd5d58fcde85/gemmi-0.4.2-cp36-cp36m-win_amd64.whl#sha256=326b19d2fb0b8714f6a4631b3e0e2283b11424936cb994d0a330d6a70cc56986 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,355   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/95/85635908935957b4ccc1700dafdcd0c309e00a4a3291aa7a8d6c65a5f089/gemmi-0.4.2-cp37-cp37m-manylinux2010_x86_64.whl#sha256=d61e759f705dc2fd16c94947550a258668ec6e2d4085addac6dc5d746f308149 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,356   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bf/5e/2dcb2454003be5505eb7a75b5eecde74486d2a1bea2f189fc30c749076e6/gemmi-0.4.2-cp37-cp37m-win32.whl#sha256=e9eecdc0afdf6d05b0b668462fc45f48c32dcb22a153e6138ffd590dc220b957 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,356   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/8d/055161b661f3dcebbd1cfa3c55ba02ab7f434d87147481b3566080a4ccac/gemmi-0.4.2-cp37-cp37m-win_amd64.whl#sha256=18a9f24cca2ad93f5feec70abe64eb75c1547509e4530898e4b5566696ad26a1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,356   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/82/a45cb30c350b56f4dc628986b84b91310b88e1b2ac73ae3b37c3a1ac8585/gemmi-0.4.2-cp38-cp38-manylinux2010_x86_64.whl#sha256=c922d52b726ee554dfcbe8e01af11bb32b2ddbd9d6377ceb7db836b5bf2b15b5 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,356   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9a/39/784a739b8d83175667ef1cc85a53acbe79b9437292031225b3ed552bc035/gemmi-0.4.2-cp38-cp38-win32.whl#sha256=5b586c704add91aa59ca14cf7f03142512e9785329b42a8cb9007453548511e9 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,356   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/62/8911a99982bc95e629f41a7096f0f907cf4b001ed6c0087e0a2763c943e1/gemmi-0.4.2-cp38-cp38-win_amd64.whl#sha256=06c0efb154804fab1c74c816bde974089e0653fb58c8f3c0ad9795e7c5678217 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,357   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/9b/d75a5882a9bb13d47e99e0552b516e330004b411e4547b37a3743c74976b/gemmi-0.4.2-cp39-cp39-manylinux2010_x86_64.whl#sha256=ffca3e4973bfb1034044815b087370de5af12143a18f1b37393a5d2f0d4e03df (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,357   Found link https://files.pythonhosted.org/packages/a4/ac/b850ac03ad0f899c0c8f699af60b5c515291c74470601e3b12803d6fca2e/gemmi-0.4.2.tar.gz#sha256=26e1402e48a54132c1a85c7ae1f6d939b3fae4b1fb8d5fa33751cbebebac52ee (from https://pypi.org/simple/gemmi/), version: 0.4.2
2021-07-21T11:15:44,357   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/23/72/c5e726b2722bdfbbb82847582ff64caaf60f70ca38adf11946561fbc75ce/gemmi-0.4.3-cp27-cp27m-manylinux2010_x86_64.whl#sha256=8a2e3b4520e40b32fc5202ae916c8e654b382ece6e6bcb2c5938d5915556c792 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,357   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/cf/5a9f3534db7e32658104b69e8a631c4fcf9a4bff7b8d38dca572bb6ed5d7/gemmi-0.4.3-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=27b97d8d1e5d1490d51a39c07ebc7640dd29b35b058bacb06db9b4ab21b0c118 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,358   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d4/8b/c55499a4d0d2a155c4c4ce220a2a942f0026909f4ec849609fc6688eb5a4/gemmi-0.4.3-cp35-cp35m-manylinux2010_x86_64.whl#sha256=182acd66e655a5cd5efd233e4baa0e1c153e8e15053767d2b3e6b5776f57176b (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,358   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c4/d3239cd44ce93e14454e2f6596a723f5245776fe822238ac0473ef6d81d4/gemmi-0.4.3-cp36-cp36m-manylinux2010_x86_64.whl#sha256=4875dd21b03ce53882a4569978d0c7f4db1f9984605721989da6836835a24ff6 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,358   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/b9/4821a0951160692524e8394629b952337ad0fbe111b5cf26dc56a9c8e59e/gemmi-0.4.3-cp36-cp36m-win32.whl#sha256=65466099cb7f64117693b55e2b6c41d834a3c7651bfbce0890bd8c9fb7b70f05 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,358   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6a/52/e2813c31a8d080649737308823e85d17324defb683a61e853beea00ed63e/gemmi-0.4.3-cp36-cp36m-win_amd64.whl#sha256=f4ff57170a1acd028b3bfd68d7228bf930855d2d3b2631a9eea4e01602ef3fb2 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,358   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b1/91/659f69913777cc1fa590f25f5831d9803c9681923690e426af680d9380cd/gemmi-0.4.3-cp37-cp37m-manylinux2010_x86_64.whl#sha256=0e52c81f36d45b51055c0ab62317f72e136a86b9c4ca3ea8045eecaace7b09e5 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,359   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/c9/e78fbd8a8d48f13c9da4e6afc4941bbf40142e6423d487335f8fcf46e2db/gemmi-0.4.3-cp37-cp37m-win32.whl#sha256=5940874fbbc5dbf350789d03e91ba10ed902ad9d3321030a524337e437c8409c (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,359   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/6e/0ab2f8a07c42a54d6e6fda65549ff13a081c94601f084f795a380a8f14d2/gemmi-0.4.3-cp37-cp37m-win_amd64.whl#sha256=40b926cfc1e03963c4d19455dccce11daf9350b1ac54210608b24936e25bb833 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,359   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/43/aa263331953f26ee8cf573129576a87252c4667686b04280e2e2d46a1ef7/gemmi-0.4.3-cp38-cp38-manylinux2010_x86_64.whl#sha256=533c17851d4f2d9d5207cfe8b97de9e7fd42bbf95995e9ee5044c6ce59daae6d (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,359   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/37/dd827724ae053469469c4dc3f050b5b16093195fa50030a202a593fb380a/gemmi-0.4.3-cp38-cp38-win32.whl#sha256=9b13da898e62666249251a358f10087ffdac2bcf8734bb1780b54fda263babc8 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,359   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/15/4460162edf9aea5c568b6fbdf2b55536800b32e639064db8fb112c779edf/gemmi-0.4.3-cp38-cp38-win_amd64.whl#sha256=e70501c35e56ec6dafd8a2d64d74a3e5cf32fc87c5934d5ca68ad077bb0fe042 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,360   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/35/e8b97d567e27090876330931af7a5f097aed5387067718a25a9d4225ff82/gemmi-0.4.3-cp39-cp39-manylinux2010_x86_64.whl#sha256=f2b50d47148bb02c0cade07d936c27efd56aa192b871cbd05c50e815f0f5189c (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,360   Found link https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz#sha256=dd1f9d3b5ae06593f15e3093db5a41e6d4609307888ed3b25388087eae7ad9d3 (from https://pypi.org/simple/gemmi/), version: 0.4.3
2021-07-21T11:15:44,360   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/88/e074befd61f9abbc617edd24283bf642869882c023b2da5cf78bbbe8b967/gemmi-0.4.4-cp27-cp27m-macosx_10_9_x86_64.whl#sha256=06ac6acad283b6d6181c337cc9cbd24ab4ad745b51da2e55ed1ef6973d0b5af9 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,360   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/f0/47da82d4ba10f1d15a212d74c9d712158b994bde8115f9d6d01f5c4ebe6f/gemmi-0.4.4-cp27-cp27m-manylinux2010_i686.whl#sha256=8a18033708701fa6c866fef000142a2e2ae14246a8995308d0369e3c13fe65fa (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,360   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/b6/28f2a87d7e189fe9604897e13fd05a881a7933d7d293fc04efdbc6ad436b/gemmi-0.4.4-cp27-cp27m-manylinux2010_x86_64.whl#sha256=c68986b7542e8bd4047437fcf378e991ad90edeb6f89079d740225c994bc51dd (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,361   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/06/0c6eda981f85fb5f1633d19c8ce0cbd2d8fcf5677b5d563740241737ac90/gemmi-0.4.4-cp27-cp27mu-manylinux2010_i686.whl#sha256=98dff07c2c7815462abadbfc17fbe76d772e9e245fcef055d6288d03ffdb3c9f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,361   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/66/c696b84cab12dcc9c41f4d59eb767ed681359a0eafd331d9dfe5bab42b8c/gemmi-0.4.4-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=8d8c82d510af39a126b398da03fe4ca475329a253bbf03dfe09b59d78c5e34e9 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,361   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/ed/d6745f20401fa9383ec0f166120c8f1d569795d5dc75601386e9811e587e/gemmi-0.4.4-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d43f4e79bf7b9a069ac8874c243b64840c3311e19c0fa273ad24d136c84e045b (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,361   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dc/18/0b5127d8f84979f371d588a323047483a22604eadb457ce9cee709895f29/gemmi-0.4.4-cp36-cp36m-manylinux2010_i686.whl#sha256=949eaec9199f5c503c997f91bcf1dd466e2ef6f1231367bf9c2a124d994e6226 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,361   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6b/62/eea9c84d0e37df89b34c03b562522556419c080462c92eede3ccb9697625/gemmi-0.4.4-cp36-cp36m-manylinux2010_x86_64.whl#sha256=c53cba8d1391021ba4798991109659c10bedaf8ee81164fd8b13fb55a4d86a9f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,362   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/62/78cbc5c9e8f68a84547621a5d42ae22560c0215f918a6c8e007835a59e8a/gemmi-0.4.4-cp36-cp36m-win32.whl#sha256=c3deb52d2b7f72db23ae5c5cb9d01d0fde1d26b736629b68846ad5421db1a20e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,362   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/86/7258f7f4797308e3750c30ec16d9850dac8d0e865fc1d2fcd18e345ff82d/gemmi-0.4.4-cp36-cp36m-win_amd64.whl#sha256=c692693b0466895dc0cc172aad70e6d657435a161f9c7fc8b49dabac8a5ebb06 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,362   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/44/c8cd594bc8075226ec1d38c330eb412650e75d9899db7c160b96b788fe5f/gemmi-0.4.4-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=a4dafdb7d1068d7ae205d89409e128a0778c197a23f22472440371d8290c3592 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,362   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/68/832c4428629c200710b73ab360bbf3cbbe7bdff439618e06c136efb083a4/gemmi-0.4.4-cp37-cp37m-manylinux2010_i686.whl#sha256=0e10dfcbb8f357af4865cd9a4b7f8429ac955fc1ec13ab309fddcbafcca07b5f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,362   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/02/b1edf3ca6e2bbc04d5bf9223ca53571a6dec25156b708bc4303352f4f8b1/gemmi-0.4.4-cp37-cp37m-manylinux2010_x86_64.whl#sha256=ccb6e07f90b7e7fdf60ad6785b1c1d00f40d08e8f017a892273f550498b8f4c2 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,363   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/13/2f/37bbe81cdad4ad391102f85f660dddc3b9c69a9babb79edf7a546bb00a34/gemmi-0.4.4-cp37-cp37m-win32.whl#sha256=805ceab04ae4a94fcdc6e6570eb43f62e31d8625e22178e6410ca91cd8b9154d (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,363   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e0/3b/624099e50f36dccf6adf402c5c30f8aa788a29e7a7daa0814ffc2b029438/gemmi-0.4.4-cp37-cp37m-win_amd64.whl#sha256=d248cc41378cc2222823fb361c66cb1b54f8bbffc3a86ce5e25a81a6d2747388 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,363   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/e6/54a757bb93d5e818d3c2a9a2c78c4ce2d929831e82248e2bbdfc8b83a5a4/gemmi-0.4.4-cp38-cp38-macosx_10_9_x86_64.whl#sha256=db1c7347a999d654491436314f6baade4df7e19de1a4593b10b96ec9739868ee (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,363   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/61/12/f0e468abe27ca297d48739409f91ae7c8316179eb46e7d6566ef6f8531f0/gemmi-0.4.4-cp38-cp38-manylinux2010_i686.whl#sha256=b8a49aed16792fc6449076847b207af60527bd8c5ed35941f806310b41ff09c3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,363   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/25/f86bf28f87680c7acfc0366eaeef544af75c17480777e9572f845b73a9ae/gemmi-0.4.4-cp38-cp38-manylinux2010_x86_64.whl#sha256=9f736fead1ba7d617f1a99ed0d034c9352df8df285e67fd29e201abd9b887da3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,364   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/0b/5ed3cfbd0bc92abf4bed4dd765ed5c3aa639ff2500abe9855c6178f4a8f5/gemmi-0.4.4-cp38-cp38-win32.whl#sha256=095e7da75761fe455e338e0e483757c7d75a49f084003987a5024a829b6d0c26 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,364   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/54/78bf9f5257e928db4a5c3464ac0258b2e7c8ddfb01103dd2278bfc996a1c/gemmi-0.4.4-cp38-cp38-win_amd64.whl#sha256=c5214191d65e4fe2ebd7581aabfc431b2aca113ead63040cbd9bacc7148d10f2 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,364   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fe/73/b1274d1b4e946992e17c6260498e2538744eb33003b17d9d9a8ee0560b32/gemmi-0.4.4-cp39-cp39-macosx_10_9_x86_64.whl#sha256=e1d9dd1d87ae09a0cfd09f2e965c2422029651bf12d84994b5ae1559074888bf (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,364   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/44/e9f31da6e5d63564620ccdfa8fbd811a7056d0ea114874273a8357b14284/gemmi-0.4.4-cp39-cp39-manylinux2010_i686.whl#sha256=bf6b2762d330fb1cba8233279da8ec21402e87718e98f08f2ebb7a7a99afa36b (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,364   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/3e/d823ff5a6fa3dcf98a6460ee281c82f73c384f27467d869018b674aa7636/gemmi-0.4.4-cp39-cp39-manylinux2010_x86_64.whl#sha256=c0021ee001a2efddb943b3e420421204b546b18d4c2cc828b74f278b9e7860ff (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,365   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/14/73eda6090c1a6062c6428762e3b722856dada25bfff509532ccd1b039c87/gemmi-0.4.4-cp39-cp39-win32.whl#sha256=fac3841b4db5f7b2f9aed5fd4cdf2021e01173a5e27611c1411752142c9a4c46 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,365   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/f7/2b4825646ab5c6afaa50858c97267cbc2b234b6e99a43d956924c6518f0e/gemmi-0.4.4-cp39-cp39-win_amd64.whl#sha256=2a87669bfc6e6c7d6286bb5c98a088d1ba16a7750499f4b8a40d61325e1ae7db (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,365   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/34/8bdb8d15ead8117585bec881c80a62983fbd74ebc1b08bf164f15d5f97c7/gemmi-0.4.4-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=f1fbbf7470e4ec8e8c057bcc2f16be115c9a5bd7b4480bbb5f03381076bca1b4 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,365   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/14/dd376612fc3899f68d83d60d1988f89402dd0c8f4a7010006b2f567f0d71/gemmi-0.4.4-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=be99ac15d21bfca31716f3865d8143c0d45809cf8523b40f1b4a72007a0d767f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,365   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/39/e1cdaf64ff7d3c7c7b7e186e3f9f32b9957dd9644263e0879555cc2aebe4/gemmi-0.4.4-pp36-pypy36_pp73-win32.whl#sha256=925bff4e17577aff037e442a29ccc6d20a8c434cccac3f8bf211206ab6166f30 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,366   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/37/89532fece5b13a637174902bf5719cc6546c77b19b6a26e0292fc7cf8898/gemmi-0.4.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=6d0ff856a6bfa077b0af51f677950b4fba8c3eab5edc6fd71637ed702e11819d (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,366   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/68/be/1dbdfd3831075a2920c4c3cecb9178dba6f270d77995c773d65a8e16a701/gemmi-0.4.4-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=6435d1be8aac19664dea1383f8e7f5627eefc1a23b68bf3d6379ca540297fe36 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,366   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/7d/3c1fab59be120cdfb4d5f2500b58864c55467381533564babcd43f8fd012/gemmi-0.4.4-pp37-pypy37_pp73-win32.whl#sha256=fc6da7524c20947ac7c98923b039e6049d13ef3571140c829e90098bafd4279c (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,366   Found link https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz#sha256=308032ecee13391e4638a59519cc766c18b60ee3cd606be6a32e386d6f42ad99 (from https://pypi.org/simple/gemmi/), version: 0.4.4
2021-07-21T11:15:44,366   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/89/62715a67fdbec732441eefb9ab39bd62f7f43334ac4015b791b977be68c5/gemmi-0.4.5-cp27-cp27m-macosx_10_9_x86_64.whl#sha256=e1c4a7ebc11bda58fe37e3122014e6b759aa304e060a418b9d94e7fd7ad63a4b (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,367   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/39/c38fa021a44e9343cc886722365d453cf364e2a5a67c285bb328b20ff540/gemmi-0.4.5-cp27-cp27m-manylinux2010_i686.whl#sha256=fdb7369a6239325cd006b385e39f0b03fd0ae859e3836364448279b45f309f64 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,367   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f7/18/b755993b408896b60e4852f9107331006a1b99c83926a948c9b4b27aab32/gemmi-0.4.5-cp27-cp27m-manylinux2010_x86_64.whl#sha256=920123a13367dc00b75835be38a88cb4ff58b73075f0455267b9d89e294e205f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,367   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/57/51/0c582b5adc6cb799a6b87766c498fe7144f792cba2c70b6e4ff31542e874/gemmi-0.4.5-cp27-cp27mu-manylinux2010_i686.whl#sha256=0c7121d24a39f704f2a714b5242bba2f492101ddd8aab8bb2ba6a2b7bb70a261 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,367   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/a8/12c264b0b6d417ac551fdceb2fd5ac3e0bb2e2a83f4931c8f86135b2df4d/gemmi-0.4.5-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=5b5b40c5289affee9549ce07edcdd7e2757f0852462b2c25847c5a2769f22d02 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,367   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/b2/660f35b80809bd4f75f2b8f5dd356f1b3b3ee6b999e6811743c68c0dc308/gemmi-0.4.5-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=b091810784901da3db22eb8706f4b1a6dcc6b562a1178db3fd5a62ee80055832 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,368   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/44/f25c57803987a15bea2c24d638da47e8e778fd53acb194e1757523778938/gemmi-0.4.5-cp36-cp36m-manylinux2010_i686.whl#sha256=6dbb7b44a65b6803eb0b47c0bd842c9437d7c1f35f2313f8d3714d4b59fd6cce (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,368   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/9d/58f15c2552bfc071f973eec23499c9d6a1b8dc0ce60c7997e49a7402ec91/gemmi-0.4.5-cp36-cp36m-manylinux2010_x86_64.whl#sha256=a2c2f6058ae7c4886953bf86523dc47481db3ed7e1f3e9173716a3ee839eafcf (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,368   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0d/f0/bfa6c95e9071a4061d60c1240f6d5c1dccec497bfbc4a78e9dd0d5d261fa/gemmi-0.4.5-cp36-cp36m-win32.whl#sha256=04d83f14868b96d94c28552e29a63cff5ebd2dcc3cfaf187d23f4a92dd3ff5ea (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,368   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/11/448e121ac8ac7217b6f7cc570a6d26bc51d27858c78bc533b6c2a7640b8e/gemmi-0.4.5-cp36-cp36m-win_amd64.whl#sha256=6e8a0fc30a5ff29275df00f05a0e2c2a835ec11281f4f596cdbf6496957dcaa7 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,368   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/72/77ea0f799d73d54999181ddd615206492343ada2617996f7169acab168ec/gemmi-0.4.5-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=6e31f1d82cfa6efef5f41acf9e42aa79033ceac7ce43b3506b4fdec4768058d7 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,369   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/0b/52ea2dd8bb3d311e441674a79cee4dd490140865595473cb222096c8cdc4/gemmi-0.4.5-cp37-cp37m-manylinux2010_i686.whl#sha256=4585db43804da417733695d772fda639c291b7c0884782ecec4d1fe9b18ca7a3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,369   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/0d/a91f70f43b8a0732f82739b3abac31fc6d363c229395308205b87d383045/gemmi-0.4.5-cp37-cp37m-manylinux2010_x86_64.whl#sha256=2092e41ec84a4a46aa524d6d7757c8a4a605079046fce66fb54dfb8c0e5bf7d4 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,369   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/1e/57b1c8dd3d6b918198328579e69ce68f7b0df2d7021fe9b7dac55d7e9cb6/gemmi-0.4.5-cp37-cp37m-win32.whl#sha256=31c587ea6e759cbab910b61fca9915cc5f43b57ffc7b8f476aacff50a4e85fe4 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,369   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/26/3683d8c49bae1ee13b96911f28006a90163eb65778695c2e67939c4bc37c/gemmi-0.4.5-cp37-cp37m-win_amd64.whl#sha256=a699bd63fc23a69491e07380a4dc7ffe4413c8c2d713f47e47fda375611491f1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,369   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/69/e1/b12f90c4962282c329afdc1a4c9cb7475dda068ec1e0a815209010621c83/gemmi-0.4.5-cp38-cp38-macosx_10_9_x86_64.whl#sha256=4d631c4d619a2d541fa782dc4cd80d890f9ab035f752ef3df6382c9410c8f445 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,370   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/90/276372a683c5687081103062ebc8e535181d9eff9ecf4eee42c9081be19f/gemmi-0.4.5-cp38-cp38-manylinux2010_i686.whl#sha256=856373e20c79a00d584663b382f94c04f4420680ebb110bc4a53c2c0eeb9e0c6 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,370   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/65/e5/da6409d8b6d9850036c3ef87e460336c6231b1e0c3bb95f34dd0aaf3836b/gemmi-0.4.5-cp38-cp38-manylinux2010_x86_64.whl#sha256=623b9c2ae4d79d5e7a884e77fc280a27548ca9e38f48b7bae2b0f34173bb1f68 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,370   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/8e/1764f1045f32c0bfb1d2901ac8b75fbe97e1e392b355ee9af815cf38ef57/gemmi-0.4.5-cp38-cp38-win32.whl#sha256=157f6912317fdf5d67f357295791f6bf09c65807a32869bfe0e727284bc292fc (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,370   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/2f/73a7b609eac9a9c71e7bff951c2e100e407da14c5a214dc18eda13eb4141/gemmi-0.4.5-cp38-cp38-win_amd64.whl#sha256=95d0f2513b337665e83c5c597b6e173f4652aa3a9020dd6d8dec354ef3384028 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,370   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/d4/4208b738e30605318d8f26090bc4380846040f98ded22271e7e4ca46d2c5/gemmi-0.4.5-cp39-cp39-macosx_10_9_x86_64.whl#sha256=22798169f42d28791944b02590495ecbe351f42355aa772f7c3f66bf2b3945bd (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,370   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/ab46b8088defeb988d95646598ba860a8a627231198d45ce61a3605ba00b/gemmi-0.4.5-cp39-cp39-manylinux2010_i686.whl#sha256=1922f1bf704a4ec26370cac149de8134a2daff3556196f2e833c1aeeac0e792d (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,371   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/2c/663a099339e2bc8294891757038496434774ac16c65a2798cc431e206a55/gemmi-0.4.5-cp39-cp39-manylinux2010_x86_64.whl#sha256=801817242e73e7941c9e3f1279f55d3b6e29bfe66aa3585347287198133c1460 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,371   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/f1/13a68d2f9a11b3664e0e1de4d79326cd67862bca4f5c49ee4bef2514b9db/gemmi-0.4.5-cp39-cp39-win32.whl#sha256=9905d8f5f4e8f51c58c4a66d6b925e2896e9884e7cb2ef88d5b2188d3c9d163e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,371   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e5/82/f72b3028dd1a01369dab40d8943011dd96bd56d7d019b848b9545345a50b/gemmi-0.4.5-cp39-cp39-win_amd64.whl#sha256=8ea3999c416085cbbb373a30bde468e215c3db0c2506a0df71700a7a3333c50d (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,371   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ee/6c/c0b2f77136489e9aada94adf29c586fa51e982d63cb162b71f598aa52e4a/gemmi-0.4.5-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=38d0270275c0f846ebd8af070a829fde935553fc0b9234a34a424afcf514aa61 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,371   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/62/0b7d622c7961f0df3818fd1e56d398c7c723ddacb9eaf864d1c729fc8e22/gemmi-0.4.5-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=551e99ff2f9ee59edd78e7b28cbf13e123aeae2b698d7eac3464db0e7a2298b1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,372   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/b1/c48b5b6c866bc104ad5ad0667d4133d9185a982928235270332fb8a21436/gemmi-0.4.5-pp36-pypy36_pp73-win32.whl#sha256=904dc646c8452ed4db7af53ec85aa3920bf3198bc58ee7ddead55d5368c79c23 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,372   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/13/721e4b76e5db2f9549ba22f0c42181d25c936a9a7d17ad2640aaf91ee38e/gemmi-0.4.5-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=9faaa0bdf8c884bb4ae6d765995dd61ddd1592644aa86fdaab8d3870622db4b5 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,372   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/e5/ac1318a6fdd197e1a1b039658efb59afbd1abbb44ea9789fd0c6b9b49724/gemmi-0.4.5-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=e1a09762126bad2f4aa0e9b3f68459ab1205f244bd4d306dc9b4ea8f9290e03e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,372   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/bf/c3c250e76b72ececf8b9b4c46c5d53bf2f321a97137bda5c791061b2eb4d/gemmi-0.4.5-pp37-pypy37_pp73-win32.whl#sha256=9fd2954c6eb5b6612096bc315508a8bc79e03c84b924d4c68f8a3e82f635dbc3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,372   Found link https://files.pythonhosted.org/packages/cb/de/3009e2c600cdface74bc3cd3a61abe573a1795494884caabce654f7d9b67/gemmi-0.4.5.tar.gz#sha256=3add3d4a24237b0d80499aea92d21d361aa1603a8fed01f076815321a2a1cf58 (from https://pypi.org/simple/gemmi/), version: 0.4.5
2021-07-21T11:15:44,373   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/fc/4278f6a11da18b4797458633032cb0a7e8babfd94e69285761ede60f972c/gemmi-0.4.6-cp27-cp27m-macosx_10_9_x86_64.whl#sha256=083116a92e0fbfa4373de32be3e43e01ca1d1e6be86b7c6ef173c3ea553861b5 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,373   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3f/2b/9f4b2fa9e86ad506c5d66d1e6eb2b2e71fa2895f2675250f0a8f314ad322/gemmi-0.4.6-cp27-cp27m-manylinux2010_i686.whl#sha256=1473bcd63ddc6df187c0f86d8a6e868525b4280b1c66f6f50c1ab25d5e722393 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,373   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/7f/10630937c391f27987c18f19aa42c4594ddb39e0b0f5302f0dfec4aa4428/gemmi-0.4.6-cp27-cp27m-manylinux2010_x86_64.whl#sha256=a9447f119c5e0d27ab9caf0926837c973b062d5949ff885bce1adf813bb77514 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,373   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/fb/798923bf3741e91253a24491049b57590469a7f50cb3cc9253fcf60945d0/gemmi-0.4.6-cp27-cp27mu-manylinux2010_i686.whl#sha256=82b61383fc8481a5fde3260b026f238c625515a1ed9f302dc5a662bedd4a1551 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,374   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/74/b4ea05a4bf76367e0ad27b4c5bc02c2ed31c32bdd2386378d72c90175c59/gemmi-0.4.6-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=e0ef1e691b9069a30e1fe0570d4ea511e6699c759bc42281f332ac4d6629902c (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,374   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/10/23fa05a07b6df83608aa59cc238f74e84d8058ad2ae310bdbb47d1c81f85/gemmi-0.4.6-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=59e6a23c19f68f57a352bde9da0725932d37c6b6aacdb7039a173433b5f57b01 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,374   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/55/e8ba86967640ea9c436a8dda39164837d45e7ee5f7fe6688ec9e52ceec81/gemmi-0.4.6-cp36-cp36m-manylinux2010_i686.whl#sha256=a55404ede320c7f1ae9167a07c8f7ff8d3d94bf447a3128620f82bf26a453dd1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,374   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/03/7cd6b99f2d8ce8ac485e7550e476ff0d752b5743486de3a953ba162f8ae7/gemmi-0.4.6-cp36-cp36m-manylinux2010_x86_64.whl#sha256=1865ae6bbab2e2ba60dd2583e97279ab8a792218ce6c66f1d793c44580900cb5 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,374   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ed/2d/e80e5393bfaea7be595bcf6ace407e0042b28496e510b38395476c9a7836/gemmi-0.4.6-cp36-cp36m-win32.whl#sha256=bb7e17fafed5a23aeedb8d85d838bcb175353d3c5d105ec808f16599c52e6324 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,374   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/1c/1ebdff39cfc9cecab2445b22e1b480d458c253dac3e9017c3d76451e908f/gemmi-0.4.6-cp36-cp36m-win_amd64.whl#sha256=0fad8b9e630bf333eaa150c38ef5321f1d25f5892e2d72a6250095b41d9831c0 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,375   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/94/f0/1a405fed888d6d3aba90bfcdf11b6e12655202b728ff2a035e3f5ff11297/gemmi-0.4.6-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=a3aabd2b9ef0b9b78b257dcf42d19e5eadd139dab04738ad5809b2ff2148dce1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,375   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/51/51/71162451f2e331bd46c154b2673f38823559e90989d5e5c1196f8fd9565b/gemmi-0.4.6-cp37-cp37m-manylinux2010_i686.whl#sha256=f460efe7d9196a4c739b884589f5db3598735881070d0099a3e3980fd14da1e9 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,375   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/29/d5b7a27bad71957f41c644c3c19637f0d9fefabbbc4c501cf6be1eb0537c/gemmi-0.4.6-cp37-cp37m-manylinux2010_x86_64.whl#sha256=c1c06a78d7dbd6806644063ce29e8c2a5fcdfa5af8e60986a0db5e2d03ef57db (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,375   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/e8/506e69e5caaf93daf0e9429f2379a16ff07d39b76916944f492d7fe369a0/gemmi-0.4.6-cp37-cp37m-win32.whl#sha256=2bf2d9f46c4bc5cb5804ca92818b4a025f68c6d1c101e839fe3810f58c2a6ba2 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,375   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/21/cd910ccb94c96cc6608e109eead1645be18715b4699382aae51604464b71/gemmi-0.4.6-cp37-cp37m-win_amd64.whl#sha256=bfcffee0607e0644fe5403b3e327ae0716479466eb04c88987c50d9ff368a8af (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,376   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/df/e72a1f1be72b6a3ff8f4def21ec8b31ac56c77bad1b871386fc8028115dd/gemmi-0.4.6-cp38-cp38-macosx_10_9_x86_64.whl#sha256=6dbf6ef26cf0c8d789099c8cfbad5b87d3f740b0adce638c7b5659373db1675a (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,376   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/cd/c2fe5e0c0673c734db137d12d45ade2a16de88a68772926ddff4ce230ac6/gemmi-0.4.6-cp38-cp38-manylinux2010_i686.whl#sha256=62a9cb3f4b44beabc38455e70531b202c0fbffe5591678d72a7e1c9b32ea3755 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,376   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/08/607d0949bb3e508feb63d71dcb16c8cc54b146d5d020e228b90db69f44c0/gemmi-0.4.6-cp38-cp38-manylinux2010_x86_64.whl#sha256=4827bae4bd2facbc7025a1eff48bbea5b43b68d2868a219ab94acd62f7083233 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,376   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/cd/df5f9d994a9b20ea68cc6efb0892011d870db72ec985c77df6298f3ca836/gemmi-0.4.6-cp38-cp38-win32.whl#sha256=f357a0b5e91a1b3ac519ee3ddd9f5e6a7bd5941d00cba4678102567c4558ba31 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,376   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1a/4a/6a4e5db1bdc3be1a1cb6c0c21193d981ea5fa2991058b4ceb7454a9cb520/gemmi-0.4.6-cp38-cp38-win_amd64.whl#sha256=49c6c5c4d851b2751ff69c57a87ef6928beb9c20dd69b109e6416cc91a0401cb (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,377   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/1b/306f7baf0785078f809c12c85652537545fc0f3320c914371ffc712f19e3/gemmi-0.4.6-cp39-cp39-macosx_10_9_x86_64.whl#sha256=60c85798ae45505c196dc905b1c742c03ace32369de821aa9066081a7c8234a2 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,377   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/d8/c37aa4a871b46ee81ffc34ffa612f917fe5ec1db64245cb4d050e5d0b827/gemmi-0.4.6-cp39-cp39-manylinux2010_i686.whl#sha256=4a3002520dec779632c877de825ff566ff704973d6cf645dd7d7acf1b8db9116 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,377   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ec/94/8d880d7694f846d9a480b504e4cc4f121055b001e6d2d9070102782bde74/gemmi-0.4.6-cp39-cp39-manylinux2010_x86_64.whl#sha256=39069e5abd4b44345c17008c6241f844c7c1fcf5240193f13dbd98d42e5c0b86 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,377   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/ef/2b5075478d09a0c9a688507124642f7e8a99d51d46c6a8dfffc9a9d9ff8a/gemmi-0.4.6-cp39-cp39-win32.whl#sha256=dde1b7a027fc4aeba200a746322a3d9cca4e26f0770498e521c085099c198b4f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,377   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/92/fcae326c99c89b286efcba8cd0c95e125f6ba909c2550ab23ad1e8377cc0/gemmi-0.4.6-cp39-cp39-win_amd64.whl#sha256=c29e9dbb8fb7780a70fd54cc95858d3074f01edbaa3efffe6495d8cd094d4362 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,378   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/24/8b/e39db36831a95644e89dea92bdd451ec6568b4e506ff9c2194cafd38d56f/gemmi-0.4.6-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=e1eb99f57b6085a617d5cc839c88059853f6f77dce7aaab6cf5fe021be2b03d1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,378   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/0a/d8cb7a05a6e3f199e0363e61e8cfc369820ea6adc84affc94a9363dec59f/gemmi-0.4.6-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=fa3b71f7fc98ff8b00d089be5955d0f155a48dc6af6f1616af9b5554fb27e86f (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,378   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/53/fa/89eabf0dbbaf91fbfc99bffcb3d603474bc6cd1ef9615e3f3213cd0cfe9d/gemmi-0.4.6-pp36-pypy36_pp73-win32.whl#sha256=3908ec8add86f3cca774bb1e98dcb77fa3c87b5ffc6bc87601dddff296a9abfc (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,378   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/de/a01cc76fdb904af071b74b404daedeedb9fd215609f18e2104e9ec42cabb/gemmi-0.4.6-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=29d4cce47e85736c100d7354c142f0b0d1ba0f7e95e5cf1daefee4fc21913eec (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,378   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/c0/22d5631bb9cf8af0c9a613987e4adaf670730c2af9878dcd49a8503aece8/gemmi-0.4.6-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=628366463a723a97af0506cfaeba4eaf4208609f9ad7410215844e8051471fff (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,379   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/79/86/a7bd5d5c766a719319244373bf8e455bf85993e67230341de9be0b3631d8/gemmi-0.4.6-pp37-pypy37_pp73-win32.whl#sha256=432f3d7ec36725eaeca3a7fe455e99f741f5582cb3bef29f3c7df539618b3192 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,379   Found link https://files.pythonhosted.org/packages/ce/18/3fd50934956b378006bbd12cde768c35dd55c7f5359e82c8680100da07a4/gemmi-0.4.6.tar.gz#sha256=8c804510ddb455282e540189a6acc39c99cc759d27f41a55983c0ea99b8a6c77 (from https://pypi.org/simple/gemmi/), version: 0.4.6
2021-07-21T11:15:44,379   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/86/cdff573b699036edc8ca9f7d83f3f40736ef17ea79726e1b2de7debcd72e/gemmi-0.4.7-cp27-cp27m-macosx_10_9_x86_64.whl#sha256=16038c4f997850ec80ec26e1da46d79ca7ca691958a7b9d8b4af48de5d976f5c (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,379   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1c/6b/786e51debc4e0e199c67fb5a00972f02c6b0e01fdbf6ad19b726fba6a669/gemmi-0.4.7-cp27-cp27m-manylinux2010_i686.whl#sha256=bda0dc61a1352e1eb23e6109664518b4e121fb50d29cf49f96b82f9dcc446516 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,379   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0d/51/99d207e130a212b2bccdc179a4e78a8ceaade11f5ee15c2f4ae3f6d4ecf2/gemmi-0.4.7-cp27-cp27m-manylinux2010_x86_64.whl#sha256=e77c0c838e7f3e6c44bbc5a85be8f446a199a0a705ed4fc1ea0b5416292725d5 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,380   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cd/2fa705d106c5c08b541db9c65bb12f237930bc504995c04e055e8f8c2a50/gemmi-0.4.7-cp27-cp27mu-manylinux2010_i686.whl#sha256=96c08fa68e0282cb4531057752e2d00d5d124797e7b7ecc995bb0732ea56d437 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,380   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/1d/85b0771c0235f82fef9df78050e5b22c8b92f89a587af1b4b6b5738fd94c/gemmi-0.4.7-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=ff0abceaddb65944c6331d74788287513a90791b0cb054f6ac49b2a9bfaa7ce3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,380   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/05/20ac362a07e783d571cc65efaf1b3ee539ec28e73985da6a059252b620e3/gemmi-0.4.7-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=c06e129a26b6360f9701a25d36a9f13396bc1bb85364f0e48e2fbdb7e043ae25 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,380   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/af/06d6cd6ce75983ccf4076846eaaf4a586964cfe121f3f767f7d7891f6bfe/gemmi-0.4.7-cp36-cp36m-manylinux2010_i686.whl#sha256=0dddbad6f0d23c466ea5ebc2d30756a9ebc85ddea9233b45403639a9b7e366d3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,380   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/61/c8e2ec5bd6d1b6288aa541edc603f43f9248a83f9ca470383d739d7d7adf/gemmi-0.4.7-cp36-cp36m-manylinux2010_x86_64.whl#sha256=b9a8217cba556d234d61bf63fd6acd0607c5826360cde7f45556b72f6b0339a8 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,381   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/c5/83d1c9084eab480c13849462e0f211d74d2aaefd0832e33a42099e4dc7a4/gemmi-0.4.7-cp36-cp36m-win32.whl#sha256=a6b29a96e67222d9f4980163c23b4482e239f8470f03508ce16efe9df892a42b (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,381   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/b9/f336e9522b8375f5e3ca8f02da39a1b3e5a62aa062ca63136c267a69f2ba/gemmi-0.4.7-cp36-cp36m-win_amd64.whl#sha256=c52da00dff031b357be636a128b84d26bcf071ee4735a58d577f445306963e8e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,381   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/54/4c0dd5642138b078b208fcd9600fc32e2d412b8945bc5b82fc74cbef20fe/gemmi-0.4.7-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=b7f0d0a584c8bc893aee3a421692ead518fb647246067032869e154e1f60432e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,381   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/91/ba6367b2cdd3e7ae0400acecb3a8b9ec714a03850eec8023aa41f6124ff7/gemmi-0.4.7-cp37-cp37m-manylinux2010_i686.whl#sha256=56b2315724960c586e1c94af31f614fb656e123432e3d157166dfe5bd6ed9ea6 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,381   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/62/5e843d8e0706d9a1afadad6d8154e837f885aeea77ce72b55a7d88fe5cb3/gemmi-0.4.7-cp37-cp37m-manylinux2010_x86_64.whl#sha256=839e221500da009a66190c21a431b29737be8097e669d3984c3b9c2c4546f5bc (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,382   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/ed/c10ad32ec19e1a81c3cf7a7d5b8e511253ed8afc6c304e03ac5fb2fe7457/gemmi-0.4.7-cp37-cp37m-win32.whl#sha256=b1e8067b68223d94fe400a22737a235ba56b3f897383c3e24da5f5756c271cc3 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,382   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1a/79/1156866fe02ba91633024c90fceb20daae7cacdd1f13a089d52dae1b9d75/gemmi-0.4.7-cp37-cp37m-win_amd64.whl#sha256=3df4ec6a53767fe9fac92dc80cbdb19eae8eb5beb2c2a280628760783d0c3e06 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,382   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/86/8d3c3302d1bfc07187fb2c049ff130c9e512c3039a806ed2dbd5e2975efa/gemmi-0.4.7-cp38-cp38-macosx_10_9_x86_64.whl#sha256=862fd1975e2a1a0013bb5801c8f563645e4ce7b27785e2c5e893080705251965 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,382   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4a/1f/df29f693708477accb02e7aa314f31838b2706ce7c8ddb42c95273760a88/gemmi-0.4.7-cp38-cp38-manylinux2010_i686.whl#sha256=3f1d3c9814c1ae40595f515214c27a454dfa207c58b6094e16eeb314b4fb42b9 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,382   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/5d/45b02fecc8de9ea01860f3619954b8f97d702a25d21b59c782b2d0a081c0/gemmi-0.4.7-cp38-cp38-manylinux2010_x86_64.whl#sha256=d8dc0b2580d9a8afe10ac895e8494aedf42231ea4b8d7f1b2e7a194c0cfb01e1 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,382   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/65/5a/d7ef0e8daa496d1e7297fade11e9ef751b525e5e6a26aeaa53fc23acf98f/gemmi-0.4.7-cp38-cp38-win32.whl#sha256=7b23b20c1ff83b88f8d4f61ff3477716a8b5ff495c8e4166e03fb0e9ac769109 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,383   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e9/84/862810ac717e018ac4cb77860a565b40a6a072afae12e54c0c1fee2d846c/gemmi-0.4.7-cp38-cp38-win_amd64.whl#sha256=dfd4df4a87c20510c955688ba410130d631c8fe7301fa93c59ba5252027897c0 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,383   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d0/27/60f1014c10675300a44b83b9d9b6da47cbed148c9420cd407b89aca042db/gemmi-0.4.7-cp39-cp39-macosx_10_9_x86_64.whl#sha256=fe79f317d9b6e425326d64c310a22942ad7946ff6f422b62b363d12b188fb48e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,383   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/67/e3/3544831741bf92df12d53c16c10257fea7d8a5752c9212e1d6acf1359e0d/gemmi-0.4.7-cp39-cp39-manylinux2010_i686.whl#sha256=aea435633c2af30b3075594deacd256df55fec879d3cae484ea1dd715424509d (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,383   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d9/22/01d397b6c9298ceeabf12c25291afba0a04841a8ee847048136afed56f49/gemmi-0.4.7-cp39-cp39-manylinux2010_x86_64.whl#sha256=75df0a37120f34c4e8c7a9787e5aec4dd951491d870ed1167e45039a28b7e030 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,384   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/94/f2/59a58c53ea47f850008b60b059eb3a181cc05fd3d6a0abafbdbe8ad0b093/gemmi-0.4.7-cp39-cp39-win32.whl#sha256=867a7d5849c87f8e7e20e7806bc50abc372895548ecdbd29d15c0715d9459eab (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,384   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/32/48/f29a0b98b00d7f3a3cf6b7b194f77eab3cbb83a630be8cbc4fdb2d23ff04/gemmi-0.4.7-cp39-cp39-win_amd64.whl#sha256=bf08a3c86fd9a1753416ce59198bb92dfbc74448fd4068e58ac460fd49f2a7bf (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,384   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/9c/f6426743545f32e53190ca22d524819dff6b24ca98fc5c164da1db23f6db/gemmi-0.4.7-pp36-pypy36_pp73-macosx_10_9_x86_64.whl#sha256=e9c86f832f8f7def7941551e93b4a8b7fbd22ac6bdd5d42cd713941dc4270c4a (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,384   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ab/07/ea64580e7ed5ce8f2d1db56bf901e9d169d58d4dc52061d5453f6947b8ef/gemmi-0.4.7-pp36-pypy36_pp73-manylinux2010_x86_64.whl#sha256=b57ac1e854b3ff654c13463b6dc9204b489f274b7bc1b6cca80ccd3d7b90925e (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,384   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/7d/fc555f63e4842fe2411b7b5add1abb0dd0991f9c8b12a7adf98135531aa3/gemmi-0.4.7-pp36-pypy36_pp73-win32.whl#sha256=c5ae05194dfb35c8665a271aa954be0046b65697e399b1ab35ba0c8239b48269 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,385   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e9/b3/351231310fb90d16a1a443001a66be62ac3cc357f61c3c33e55ab55552e3/gemmi-0.4.7-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=2c6ec713141da611bf36a84248660d9c1ab49b451359649926f59aee459c9a25 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,385   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/59/87/54699b9751a3d1df8f0495ebf3d94de0c2c43a4890a4f00872e1217eb466/gemmi-0.4.7-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=567d1b48e10bfe4f056f9c74aa07fd355954bfa7308eac7dc10c9e3e8101a910 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,385   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/df/ea/e01a008a71fdb8fe566ec35e322fc2b85067f5158156b54e676f33386b69/gemmi-0.4.7-pp37-pypy37_pp73-win32.whl#sha256=d33a9bf473c446c71b9781fed07efc50fc80305dca26c933971c1ad0d7227768 (from https://pypi.org/simple/gemmi/)
2021-07-21T11:15:44,385   Found link https://files.pythonhosted.org/packages/1a/6a/57ab433972758026e23b70317c45e6dd3d8d5e3b613395222cfc1c66f8e0/gemmi-0.4.7.tar.gz#sha256=22b94c35e5cd807fcdadd3e548f0ddf11dc1b4c5550e3a1359cffdb3e1fc9d14 (from https://pypi.org/simple/gemmi/), version: 0.4.7
2021-07-21T11:15:44,386 Fetching project page and analyzing links: https://www.piwheels.org/simple/gemmi/
2021-07-21T11:15:44,386 Getting page https://www.piwheels.org/simple/gemmi/
2021-07-21T11:15:44,387 Found index url https://www.piwheels.org/simple
2021-07-21T11:15:44,525   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,525   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,525   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,525   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,526   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv6l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,526   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv7l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,526   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv6l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,526   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv7l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,527   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv6l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,527   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv7l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,527   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv6l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,527   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv7l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,528   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv6l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,528   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv7l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,528   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=0fa0e00dda8349e934da9b378af10d708d0f1474244d39b834fb6b5424ce357f (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,528   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=0fa0e00dda8349e934da9b378af10d708d0f1474244d39b834fb6b5424ce357f (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,529   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv6l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,529   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,529   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv6l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,529   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv7l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,530   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv6l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,530   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv7l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,530   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv6l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,530   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv7l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,531   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv6l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,531   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv7l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,531   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv6l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,531   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv7l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,532   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv6l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,532   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv7l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,532   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv6l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,532   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv7l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,533   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv6l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,533   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv7l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,533   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv6l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,533   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv7l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,534   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp35-cp35m-linux_armv6l.whl#sha256=cd4a41dc4421d9c0691772d8f2168bb365e517ac7217cb052d6713bbccc5305e (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,534   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp35-cp35m-linux_armv7l.whl#sha256=cd4a41dc4421d9c0691772d8f2168bb365e517ac7217cb052d6713bbccc5305e (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,534   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp37-cp37m-linux_armv6l.whl#sha256=df534bcd0117e11f2e4a2f83c4a05ff2fa9d29d35f7525550808ebacd7f443bb (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,534   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp37-cp37m-linux_armv7l.whl#sha256=df534bcd0117e11f2e4a2f83c4a05ff2fa9d29d35f7525550808ebacd7f443bb (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,535   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp35-cp35m-linux_armv6l.whl#sha256=b53875d6708aaf3f3b6315fbe1e72ef76c4215760d09635673e9b6e5f54df3e5 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,535   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp35-cp35m-linux_armv7l.whl#sha256=b53875d6708aaf3f3b6315fbe1e72ef76c4215760d09635673e9b6e5f54df3e5 (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,535   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp37-cp37m-linux_armv6l.whl#sha256=581b43842fd2da1beebaa4df1a87066041fb5902883a519626d81ddc6fa2469a (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,535   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp37-cp37m-linux_armv7l.whl#sha256=581b43842fd2da1beebaa4df1a87066041fb5902883a519626d81ddc6fa2469a (from https://www.piwheels.org/simple/gemmi/)
2021-07-21T11:15:44,536 Skipping link: not a file: https://www.piwheels.org/simple/gemmi/
2021-07-21T11:15:44,536 Skipping link: not a file: https://pypi.org/simple/gemmi/
2021-07-21T11:15:44,558 Given no hashes to check 1 links for project 'gemmi': discarding no candidates
2021-07-21T11:15:44,576 Collecting gemmi==0.4.3
2021-07-21T11:15:44,578   Created temporary directory: /tmp/pip-unpack-c3oyrtr9
2021-07-21T11:15:44,840   Downloading gemmi-0.4.3.tar.gz (578 kB)
2021-07-21T11:15:45,573   Added gemmi==0.4.3 from https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz#sha256=dd1f9d3b5ae06593f15e3093db5a41e6d4609307888ed3b25388087eae7ad9d3 to build tracker '/tmp/pip-req-tracker-2ga9cqzg'
2021-07-21T11:15:45,574     Running setup.py (path:/tmp/pip-wheel-avacxsi2/gemmi_26af6ae6cd674ae6ba229b7175530991/setup.py) egg_info for package gemmi
2021-07-21T11:15:45,575     Created temporary directory: /tmp/pip-pip-egg-info-lsqect8r
2021-07-21T11:15:45,575     Running command python setup.py egg_info
2021-07-21T11:15:47,099     running egg_info
2021-07-21T11:15:47,101     creating /tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info
2021-07-21T11:15:47,103     writing /tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/PKG-INFO
2021-07-21T11:15:47,106     writing dependency_links to /tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/dependency_links.txt
2021-07-21T11:15:47,109     writing requirements to /tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/requires.txt
2021-07-21T11:15:47,110     writing top-level names to /tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/top_level.txt
2021-07-21T11:15:47,111     writing manifest file '/tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/SOURCES.txt'
2021-07-21T11:15:47,305     reading manifest file '/tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/SOURCES.txt'
2021-07-21T11:15:47,308     reading manifest template 'MANIFEST.in'
2021-07-21T11:15:47,465     adding license file 'LICENSE.txt'
2021-07-21T11:15:47,480     writing manifest file '/tmp/pip-pip-egg-info-lsqect8r/gemmi.egg-info/SOURCES.txt'
2021-07-21T11:15:47,568   Source in /tmp/pip-wheel-avacxsi2/gemmi_26af6ae6cd674ae6ba229b7175530991 has version 0.4.3, which satisfies requirement gemmi==0.4.3 from https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz#sha256=dd1f9d3b5ae06593f15e3093db5a41e6d4609307888ed3b25388087eae7ad9d3
2021-07-21T11:15:47,569   Removed gemmi==0.4.3 from https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz#sha256=dd1f9d3b5ae06593f15e3093db5a41e6d4609307888ed3b25388087eae7ad9d3 from build tracker '/tmp/pip-req-tracker-2ga9cqzg'
2021-07-21T11:15:47,573 Created temporary directory: /tmp/pip-unpack-gjn1k8fe
2021-07-21T11:15:47,574 Building wheels for collected packages: gemmi
2021-07-21T11:15:47,578   Created temporary directory: /tmp/pip-wheel-w_j4vl1w
2021-07-21T11:15:47,579   Building wheel for gemmi (setup.py): started
2021-07-21T11:15:47,579   Destination directory: /tmp/pip-wheel-w_j4vl1w
2021-07-21T11:15:47,579   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-avacxsi2/gemmi_26af6ae6cd674ae6ba229b7175530991/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-avacxsi2/gemmi_26af6ae6cd674ae6ba229b7175530991/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-w_j4vl1w
2021-07-21T11:15:49,018   running bdist_wheel
2021-07-21T11:15:49,024   running build
2021-07-21T11:15:49,024   running build_py
2021-07-21T11:15:49,166   creating build
2021-07-21T11:15:49,166   creating build/lib.linux-armv7l-3.9
2021-07-21T11:15:49,167   creating build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,168   copying examples/simple_search.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,170   copying examples/__main__.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,172   copying examples/merge_mtz_mmcif.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,173   copying examples/col_order.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,175   copying examples/monomers.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,177   copying examples/aafreq.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,179   copying examples/weight.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,181   copying examples/maskdiff.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,182   copying examples/cif_i_sigi.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,184   copying examples/hello.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,186   copying examples/sub_ccd.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,188   copying examples/from_json.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,190   copying examples/long_geom.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,192   copying examples/map2mtz.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,194   copying examples/__init__.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,195   copying examples/rama_gather.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,197   copying examples/patterson_slice.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,199   copying examples/mtrix_iso.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,201   copying examples/rama_plot.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,204   copying examples/ccd_subgraph.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,205   copying examples/mtz_i_sigi.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,207   copying examples/matthews.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,210   copying examples/ccd_gi.py -> build/lib.linux-armv7l-3.9/gemmi-examples
2021-07-21T11:15:49,214   running build_clib
2021-07-21T11:15:49,222   building 'gemmi_zlib' library
2021-07-21T11:15:49,223   creating build/temp.linux-armv7l-3.9
2021-07-21T11:15:49,224   creating build/temp.linux-armv7l-3.9/third_party
2021-07-21T11:15:49,225   creating build/temp.linux-armv7l-3.9/third_party/zlib
2021-07-21T11:15:49,226   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/adler32.c -o build/temp.linux-armv7l-3.9/third_party/zlib/adler32.o
2021-07-21T11:15:49,580   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/crc32.c -o build/temp.linux-armv7l-3.9/third_party/zlib/crc32.o
2021-07-21T11:15:50,006   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzlib.c -o build/temp.linux-armv7l-3.9/third_party/zlib/gzlib.o
2021-07-21T11:15:50,476   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzread.c -o build/temp.linux-armv7l-3.9/third_party/zlib/gzread.o
2021-07-21T11:15:51,078   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inflate.c -o build/temp.linux-armv7l-3.9/third_party/zlib/inflate.o
2021-07-21T11:15:52,956   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inftrees.c -o build/temp.linux-armv7l-3.9/third_party/zlib/inftrees.o
2021-07-21T11:15:53,317   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inffast.c -o build/temp.linux-armv7l-3.9/third_party/zlib/inffast.o
2021-07-21T11:15:53,702   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/zutil.c -o build/temp.linux-armv7l-3.9/third_party/zlib/zutil.o
2021-07-21T11:15:53,908   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-3.9/libgemmi_zlib.a build/temp.linux-armv7l-3.9/third_party/zlib/adler32.o build/temp.linux-armv7l-3.9/third_party/zlib/crc32.o build/temp.linux-armv7l-3.9/third_party/zlib/gzlib.o build/temp.linux-armv7l-3.9/third_party/zlib/gzread.o build/temp.linux-armv7l-3.9/third_party/zlib/inflate.o build/temp.linux-armv7l-3.9/third_party/zlib/inftrees.o build/temp.linux-armv7l-3.9/third_party/zlib/inffast.o build/temp.linux-armv7l-3.9/third_party/zlib/zutil.o
2021-07-21T11:15:53,946   running build_ext
2021-07-21T11:15:53,952   creating tmp
2021-07-21T11:15:53,952   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpkajlqgey.cpp -o tmp/tmpkajlqgey.o -std=c++14
2021-07-21T11:15:54,035   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmptpq2o6o2.cpp -o tmp/tmptpq2o6o2.o -fvisibility=hidden
2021-07-21T11:15:54,119   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpqo5d0sfp.cpp -o tmp/tmpqo5d0sfp.o -g0
2021-07-21T11:15:54,204   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmp52d2vd0o.cpp -o tmp/tmp52d2vd0o.o -Wl,-s
2021-07-21T11:15:54,287   building 'gemmi' extension
2021-07-21T11:15:54,354   creating build/temp.linux-armv7l-3.9/python
2021-07-21T11:15:54,355   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/cif.cpp -o build/temp.linux-armv7l-3.9/python/cif.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:16:43,528   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/gemmi.cpp -o build/temp.linux-armv7l-3.9/python/gemmi.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:17:03,410   In file included from /usr/include/c++/10/algorithm:62,
2021-07-21T11:17:03,410                    from /usr/include/c++/10/valarray:38,
2021-07-21T11:17:03,410                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl.h:20,
2021-07-21T11:17:03,410                    from python/gemmi.cpp:4:
2021-07-21T11:17:03,410   /usr/include/c++/10/bits/stl_algo.h: In function ‘_ForwardIterator std::__remove_if(_ForwardIterator, _ForwardIterator, _Predicate) [with _ForwardIterator = __gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<gemmi::SmallStructure::remove_hydrogens()::<lambda(const gemmi::SmallStructure::Site&)> >]’:
2021-07-21T11:17:03,410   /usr/include/c++/10/bits/stl_algo.h:833:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:17:03,411     833 |     __remove_if(_ForwardIterator __first, _ForwardIterator __last,
2021-07-21T11:17:03,411         |     ^~~~~~~~~~~
2021-07-21T11:17:03,411   /usr/include/c++/10/bits/stl_algo.h:833:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:17:03,472   /usr/include/c++/10/bits/stl_algo.h: In member function ‘void gemmi::SmallStructure::remove_hydrogens()’:
2021-07-21T11:17:03,473   /usr/include/c++/10/bits/stl_algo.h:914:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:17:03,473     914 |       return std::__remove_if(__first, __last,
2021-07-21T11:17:03,473         |              ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2021-07-21T11:17:03,473     915 |          __gnu_cxx::__ops::__pred_iter(__pred));
2021-07-21T11:17:03,473         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:17:03,529   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:17:03,529                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/common.h:156,
2021-07-21T11:17:03,529                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pytypes.h:12,
2021-07-21T11:17:03,529                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/cast.h:13,
2021-07-21T11:17:03,530                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/attr.h:13,
2021-07-21T11:17:03,530                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:45,
2021-07-21T11:17:03,530                    from python/gemmi.cpp:3:
2021-07-21T11:17:03,530   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::SmallStructure::Site}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2021-07-21T11:17:03,530   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2021-07-21T11:17:03,530     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:17:03,530         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:17:03,689   /usr/include/c++/10/bits/vector.tcc: In function ‘gemmi::SmallStructure gemmi::mx_to_sx_structure(const gemmi::Structure&, int)’:
2021-07-21T11:17:03,689   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:17:03,689     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:17:03,689         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:17:03,998   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2021-07-21T11:17:03,998   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2021-07-21T11:17:03,998     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:17:03,998         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:17:04,167   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:17:04,167                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/common.h:156,
2021-07-21T11:17:04,167                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pytypes.h:12,
2021-07-21T11:17:04,167                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/cast.h:13,
2021-07-21T11:17:04,168                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/attr.h:13,
2021-07-21T11:17:04,168                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:45,
2021-07-21T11:17:04,168                    from python/gemmi.cpp:3:
2021-07-21T11:17:04,168   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<gemmi::SmallStructure::Site> gemmi::SmallStructure::get_all_unit_cell_sites() const’:
2021-07-21T11:17:04,168   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:17:04,168    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:17:04,168         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:17:04,169   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:17:04,169    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:17:04,169         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:17:13,975   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/grid.cpp -o build/temp.linux-armv7l-3.9/python/grid.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:18:12,117   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:18:12,118                    from include/gemmi/ccp4.hpp:16,
2021-07-21T11:18:12,118                    from python/grid.cpp:13:
2021-07-21T11:18:12,118   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator<gemmi::Fractional>]’:
2021-07-21T11:18:12,118   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Fractional>::iterator’ changed in GCC 7.1
2021-07-21T11:18:12,119     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:18:12,119         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:18:12,213   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:18:12,213                    from include/gemmi/ccp4.hpp:16,
2021-07-21T11:18:12,213                    from python/grid.cpp:13:
2021-07-21T11:18:12,214   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’:
2021-07-21T11:18:12,214   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Fractional*, std::vector<gemmi::Fractional> >’ changed in GCC 7.1
2021-07-21T11:18:12,214    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:18:12,214         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:18:16,680   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:18:16,680                    from include/gemmi/ccp4.hpp:16,
2021-07-21T11:18:16,680                    from python/grid.cpp:13:
2021-07-21T11:18:16,681   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:18:16,681   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:18:16,681     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:18:16,681         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:18:16,681   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:18:16,762   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’:
2021-07-21T11:18:16,762   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:18:16,762     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:18:16,763         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:19:07,727   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/hkl.cpp -o build/temp.linux-armv7l-3.9/python/hkl.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:19:56,801   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:19:56,802                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:19:56,802                    from python/hkl.cpp:3:
2021-07-21T11:19:56,802   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:19:56,802   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:19:56,802     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:19:56,802         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:19:56,802   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:19:56,891   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:19:56,891   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:19:56,892     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:19:56,892         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:19:56,977   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:19:56,978   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:19:56,978     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:19:56,978         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:19:57,060   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’:
2021-07-21T11:19:57,060   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:19:57,060     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:19:57,060         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:19:59,388   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator<gemmi::ReflnBlock>]’:
2021-07-21T11:19:59,388   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::ReflnBlock>::iterator’ changed in GCC 7.1
2021-07-21T11:19:59,388     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:19:59,388         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:19:59,885   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Mtz::Dataset&}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:19:59,885   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:20:00,023   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:20:00,023   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::const_iterator’ changed in GCC 7.1
2021-07-21T11:20:00,024     130 |     vector<_Tp, _Alloc>::
2021-07-21T11:20:00,024         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:00,026   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:00,026     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2021-07-21T11:20:00,026         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:00,134   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:20:00,134   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:20:00,134     184 |     vector<_Tp, _Alloc>::
2021-07-21T11:20:00,135         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:00,135   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:20:00,234   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:20:00,234   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:20:00,234     171 |     vector<_Tp, _Alloc>::
2021-07-21T11:20:00,235         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:01,430   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:20:01,430   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:20:01,430     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:20:01,430         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:01,431   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2021-07-21T11:20:01,529   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2021-07-21T11:20:01,529   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:01,529     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:20:01,530         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:08,447   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:20:08,448                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:08,448                    from python/hkl.cpp:3:
2021-07-21T11:20:08,448   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, pybind11::slice)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:08,448   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:08,448    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:20:08,448         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:08,582   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, const T&)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, const gemmi::Mtz::Dataset&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:08,583   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:08,583    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:20:08,583         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:20:09,136   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:20:09,136                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:09,136                    from python/hkl.cpp:3:
2021-07-21T11:20:09,136   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, pybind11::iterable)>’:
2021-07-21T11:20:09,137   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:09,137     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:20:09,137         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:09,138   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:20:09,138                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:09,138                    from python/hkl.cpp:3:
2021-07-21T11:20:09,138   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:09,138    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:20:09,138         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:09,443   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:20:09,443                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:09,443                    from python/hkl.cpp:3:
2021-07-21T11:20:09,443   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(pybind11::iterable)>’:
2021-07-21T11:20:09,444   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:09,444     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:20:09,444         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:13,129   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:20:13,129                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:13,129                    from python/hkl.cpp:3:
2021-07-21T11:20:13,129   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(const std::vector<gemmi::Mtz::Dataset>&, pybind11::slice)>, std::vector<gemmi::Mtz::Dataset>*, {const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:13,129   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:13,129    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:20:13,129         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:20:13,699   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:20:13,699                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:13,699                    from python/hkl.cpp:3:
2021-07-21T11:20:13,699   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_hkl(pybind11::module&)::<lambda(gemmi::cif::Document&)>, std::vector<gemmi::ReflnBlock>, {gemmi::cif::Document&}, {pybind11::name, pybind11::scope, pybind11::sibling}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:13,699   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2021-07-21T11:20:13,699     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:20:13,699         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:17,691   In file included from python/hkl.cpp:12:
2021-07-21T11:20:17,692   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >; ValueType = gemmi::ReflnBlock&; Extra = {}]’:
2021-07-21T11:20:17,692   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2021-07-21T11:20:17,692    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:20:17,692         |          ^~~~~~~~~~~~~
2021-07-21T11:20:17,692   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2021-07-21T11:20:17,772   In file included from python/hkl.cpp:14:
2021-07-21T11:20:17,772   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::ReflnBlock>, pybind11::class_<std::vector<gemmi::ReflnBlock>, std::unique_ptr<std::vector<gemmi::ReflnBlock, std::allocator<gemmi::ReflnBlock> >, std::default_delete<std::vector<gemmi::ReflnBlock, std::allocator<gemmi::ReflnBlock> > > > > >::<lambda(std::vector<gemmi::ReflnBlock>&)>, pybind11::iterator, {std::vector<gemmi::ReflnBlock, std::allocator<gemmi::ReflnBlock> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:17,772   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:318:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2021-07-21T11:20:17,772     318 |                    v.begin(), v.end());
2021-07-21T11:20:17,772         |                                      ^
2021-07-21T11:20:18,054   In file included from python/hkl.cpp:12:
2021-07-21T11:20:18,055   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’:
2021-07-21T11:20:18,055   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:18,055    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:20:18,055         |          ^~~~~~~~~~~~~
2021-07-21T11:20:18,055   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:18,134   In file included from python/hkl.cpp:14:
2021-07-21T11:20:18,134   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&)>, pybind11::iterator, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:18,134   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:318:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:18,134     318 |                    v.begin(), v.end());
2021-07-21T11:20:18,134         |                                      ^
2021-07-21T11:20:26,791   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:20:26,791                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:26,791                    from python/hkl.cpp:3:
2021-07-21T11:20:26,791   /usr/include/c++/10/bits/stl_vector.h: In function ‘pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, DiffType)>, gemmi::Mtz::Dataset, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>’:
2021-07-21T11:20:26,791   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:26,791    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:20:26,791         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:26,837   In file included from python/hkl.cpp:14:
2021-07-21T11:20:26,837   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, DiffType, const T&)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, int, const gemmi::Mtz::Dataset&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:26,838   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:183:21: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::const_iterator’ changed in GCC 7.1
2021-07-21T11:20:26,838     183 |             v.insert(v.begin() + i, x);
2021-07-21T11:20:26,838         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2021-07-21T11:20:27,328   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:20:27,328                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:27,328                    from python/hkl.cpp:3:
2021-07-21T11:20:27,329   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, DiffType)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:27,329   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:27,329    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:20:27,329         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,710   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:20:30,710                    from include/gemmi/unitcell.hpp:9,
2021-07-21T11:20:30,710                    from python/hkl.cpp:3:
2021-07-21T11:20:30,711   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >; _ForwardIterator = gemmi::Mtz::Dataset*; bool _TrivialValueTypes = false]’:
2021-07-21T11:20:30,711   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:30,711      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:20:30,711         |         ^~~~~~~~~~~~~
2021-07-21T11:20:30,711   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:30,787   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::constructor<Args>::execute<pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > >, {char [17]}, 0>::<lambda(pybind11::detail::value_and_holder&, const std::vector<gemmi::Mtz::Dataset>&)>, void, {pybind11::detail::value_and_holder&, const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor, char [17]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:30,788   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:30,788     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:20:30,788         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,788     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:20:30,788         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,788     149 |            && __assignable>::
2021-07-21T11:20:30,788         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,789     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:20:30,789         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,846   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, const std::vector<gemmi::Mtz::Dataset>&)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:30,846   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:30,846     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:20:30,846         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,846     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:20:30,846         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,847     149 |            && __assignable>::
2021-07-21T11:20:30,847         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,847     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:20:30,847         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,848   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:30,848     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:20:30,848         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,848     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:20:30,848         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,848     149 |            && __assignable>::
2021-07-21T11:20:30,849         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,849     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:20:30,849         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,954   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Mtz, std::vector<gemmi::Mtz::Dataset>, {}>::<lambda(pybind11::class_<gemmi::Mtz>::type&, const std::vector<gemmi::Mtz::Dataset>&)>, void, {gemmi::Mtz&, const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:20:30,954   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2021-07-21T11:20:30,954     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:20:30,954         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,954     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:20:30,954         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,954     149 |            && __assignable>::
2021-07-21T11:20:30,955         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:30,955     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:20:30,955         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:20:39,878   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/mol.cpp -o build/temp.linux-armv7l-3.9/python/mol.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:21:45,902   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:21:45,902                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:45,902                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:45,902                    from python/mol.cpp:3:
2021-07-21T11:21:45,902   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:21:45,902   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:21:45,902     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:21:45,903         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:45,943   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:21:45,943   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:21:46,110   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2021-07-21T11:21:46,110   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2021-07-21T11:21:46,110     171 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:46,110         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:46,142   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:21:46,142                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:46,142                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:46,142                    from python/mol.cpp:3:
2021-07-21T11:21:46,142   /usr/include/c++/10/bits/stl_vector.h: In function ‘void remove_child(P&, int) [with P = gemmi::Residue]’:
2021-07-21T11:21:46,143   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:21:46,143    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:21:46,143         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:46,214   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::remove_alternative_conformations(T&) [with T = gemmi::Chain]’:
2021-07-21T11:21:46,214   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:21:46,215    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:21:46,215         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:46,466   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:21:46,467                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:46,467                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:46,467                    from python/mol.cpp:3:
2021-07-21T11:21:46,467   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Position&}; _Tp = gemmi::Position; _Alloc = std::allocator<gemmi::Position>]’:
2021-07-21T11:21:46,467   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Position>::iterator’ changed in GCC 7.1
2021-07-21T11:21:46,467     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:21:46,468         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:47,158   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:21:47,158                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:47,158                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:47,159                    from python/mol.cpp:3:
2021-07-21T11:21:47,159   /usr/include/c++/10/bits/stl_vector.h: In function ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’:
2021-07-21T11:21:47,159   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:21:47,159    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:21:47,159         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:50,598   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:21:50,599                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:50,599                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:50,599                    from python/mol.cpp:3:
2021-07-21T11:21:50,599   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:21:50,599   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:21:50,599     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:21:50,599         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:50,599   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:21:50,681   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’:
2021-07-21T11:21:50,682   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:21:50,682     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:21:50,682         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:50,824   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::Structure::setup_cell_images()’:
2021-07-21T11:21:50,824   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:21:50,825     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:21:50,825         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:50,826   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:21:50,826     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:21:50,826         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:51,731   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:21:51,731                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:51,731                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:51,732                    from python/mol.cpp:3:
2021-07-21T11:21:51,732   /usr/include/c++/10/bits/stl_vector.h: In function ‘gemmi::SupResult gemmi::calculate_superposition(gemmi::ConstResidueSpan, gemmi::ConstResidueSpan, gemmi::PolymerType, gemmi::SupSelect, char, bool)’:
2021-07-21T11:21:51,732   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2021-07-21T11:21:51,732    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:21:51,732         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:21:51,733   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2021-07-21T11:21:51,733    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:21:51,733         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:21:51,734   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2021-07-21T11:21:51,734    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:21:51,734         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:21:51,735   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2021-07-21T11:21:51,735    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:21:51,735         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:21:52,180   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:21:52,181                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:52,181                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:52,181                    from python/mol.cpp:3:
2021-07-21T11:21:52,181   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2021-07-21T11:21:52,181   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2021-07-21T11:21:52,181     184 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:52,181         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:52,182   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2021-07-21T11:21:52,258   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:21:52,258                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:52,258                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:52,258                    from python/mol.cpp:3:
2021-07-21T11:21:52,258   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::vector_remove_if(std::vector<T>&, F&&) [with T = gemmi::Atom; F = gemmi::trim_to_alanine(gemmi::Residue&)::<lambda(const gemmi::Atom&)>]’:
2021-07-21T11:21:52,259   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:21:52,259    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:21:52,259         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:52,434   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::remove_hydrogens(T&) [with T = gemmi::Structure]’:
2021-07-21T11:21:52,434   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:21:52,435    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:21:52,435         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,221   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:21:56,221                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:56,221                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:56,221                    from python/mol.cpp:3:
2021-07-21T11:21:56,221   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:21:56,221   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,221     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:21:56,222         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,351   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:21:56,352   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::const_iterator’ changed in GCC 7.1
2021-07-21T11:21:56,352     130 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,352         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,354   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:21:56,354     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2021-07-21T11:21:56,354         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,435   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:21:56,436   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,436     184 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,436         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,436   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,515   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:21:56,515   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,515     171 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,515         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,584   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::NcsOp&}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:21:56,584   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,584     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:21:56,584         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,640   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:21:56,640   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::const_iterator’ changed in GCC 7.1
2021-07-21T11:21:56,641     130 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,641         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,642   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:21:56,642     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2021-07-21T11:21:56,642         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,694   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:21:56,695   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,695     184 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,695         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,695   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,733   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:21:56,734   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,734     171 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,734         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,920   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:21:56,920   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2021-07-21T11:21:56,920     184 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:56,920         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:56,920   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2021-07-21T11:21:57,011   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:21:57,011   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2021-07-21T11:21:57,011     171 |     vector<_Tp, _Alloc>::
2021-07-21T11:21:57,011         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:21:57,165   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:21:57,165                    from include/gemmi/model.hpp:15,
2021-07-21T11:21:57,166                    from include/gemmi/align.hpp:8,
2021-07-21T11:21:57,166                    from python/mol.cpp:3:
2021-07-21T11:21:57,166   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’:
2021-07-21T11:21:57,166   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:21:57,166      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:21:57,166         |         ^~~~~~~~~~~~~
2021-07-21T11:21:57,167   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:21:57,229   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’:
2021-07-21T11:21:57,229   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:21:57,229   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:21:58,300   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:21:58,301   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:21:58,301   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:22:05,483   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:05,483                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:05,483                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:05,484                    from python/mol.cpp:3:
2021-07-21T11:22:05,484   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, pybind11::slice)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:05,484   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:05,484    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:05,484         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,803   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, pybind11::slice)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:05,803   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:05,803    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:05,803         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,940   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:22:05,941                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:05,941                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:05,941                    from python/mol.cpp:3:
2021-07-21T11:22:05,941   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, const std::vector<gemmi::NcsOp>&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, const std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:05,941   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:05,941     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:05,941         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,942     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:05,942         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,942     149 |            && __assignable>::
2021-07-21T11:22:05,942         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,942     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:05,942         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,942   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:05,942     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:05,943         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,943     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:05,943         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,943     149 |            && __assignable>::
2021-07-21T11:22:05,943         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,943     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:05,943         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:05,994   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:05,994                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:05,994                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:05,994                    from python/mol.cpp:3:
2021-07-21T11:22:05,994   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, const T&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, const gemmi::NcsOp&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:05,994   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:05,994    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:22:05,995         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:22:06,029   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, pybind11::slice)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:06,029   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:06,029    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:06,029         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,180   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:22:06,181                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:06,181                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:06,181                    from python/mol.cpp:3:
2021-07-21T11:22:06,181   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, const std::vector<gemmi::Connection>&)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, const std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:06,181   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:06,181     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:06,182         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,182     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:06,182         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,182     149 |            && __assignable>::
2021-07-21T11:22:06,182         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,182     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:06,182         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,182   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:06,183     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:06,183         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,183     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:06,183         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,183     149 |            && __assignable>::
2021-07-21T11:22:06,183         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,183     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:06,183         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:06,231   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:06,231                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:06,231                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:06,232                    from python/mol.cpp:3:
2021-07-21T11:22:06,232   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, const T&)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, const gemmi::Connection&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:06,232   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:06,232    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:22:06,232         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:22:08,029   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:22:08,029                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:08,029                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:08,029                    from python/mol.cpp:3:
2021-07-21T11:22:08,030   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Structure, std::vector<gemmi::Connection>, {}>::<lambda(pybind11::class_<gemmi::Structure>::type&, const std::vector<gemmi::Connection>&)>, void, {gemmi::Structure&, const std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:08,030   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:08,030     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:08,030         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,030     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:08,030         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,030     149 |            && __assignable>::
2021-07-21T11:22:08,030         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,031     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:08,031         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,251   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Structure, std::vector<gemmi::NcsOp>, {}>::<lambda(pybind11::class_<gemmi::Structure>::type&, const std::vector<gemmi::NcsOp>&)>, void, {gemmi::Structure&, const std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:08,251   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:08,251     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:08,251         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,251     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:08,251         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,251     149 |            && __assignable>::
2021-07-21T11:22:08,251         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:08,252     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:08,252         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:10,689   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:10,690                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:10,690                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:10,690                    from python/mol.cpp:3:
2021-07-21T11:22:10,690   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(const std::vector<gemmi::Connection>&, pybind11::slice)>, std::vector<gemmi::Connection>*, {const std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:10,690   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:10,690    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:22:10,690         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:22:10,807   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(const std::vector<gemmi::NcsOp>&, pybind11::slice)>, std::vector<gemmi::NcsOp>*, {const std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:10,807   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:10,807    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:22:10,807         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:22:20,579   In file included from python/mol.cpp:17:
2021-07-21T11:22:20,579   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >; ValueType = gemmi::Assembly&; Extra = {}]’:
2021-07-21T11:22:20,579   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:20,580    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:22:20,580         |          ^~~~~~~~~~~~~
2021-07-21T11:22:20,580   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:20,580   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:20,636   In file included from python/mol.cpp:19:
2021-07-21T11:22:20,636   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&)>, pybind11::iterator, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:20,636   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:318:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:20,637     318 |                    v.begin(), v.end());
2021-07-21T11:22:20,637         |                                      ^
2021-07-21T11:22:20,749   In file included from python/mol.cpp:17:
2021-07-21T11:22:20,749   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >; ValueType = gemmi::NcsOp&; Extra = {}]’:
2021-07-21T11:22:20,750   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:20,750    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:22:20,750         |          ^~~~~~~~~~~~~
2021-07-21T11:22:20,750   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:20,806   In file included from python/mol.cpp:19:
2021-07-21T11:22:20,806   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&)>, pybind11::iterator, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:20,806   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:318:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:20,806     318 |                    v.begin(), v.end());
2021-07-21T11:22:20,807         |                                      ^
2021-07-21T11:22:20,848   In file included from python/mol.cpp:17:
2021-07-21T11:22:20,848   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >; ValueType = gemmi::Connection&; Extra = {}]’:
2021-07-21T11:22:20,848   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:20,848    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:22:20,848         |          ^~~~~~~~~~~~~
2021-07-21T11:22:20,849   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:20,926   In file included from python/mol.cpp:19:
2021-07-21T11:22:20,926   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&)>, pybind11::iterator, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:20,927   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:318:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:20,927     318 |                    v.begin(), v.end());
2021-07-21T11:22:20,927         |                                      ^
2021-07-21T11:22:21,016   In file included from python/mol.cpp:17:
2021-07-21T11:22:21,016   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >; Sentinel = __gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >; ValueType = const gemmi::Atom&; Extra = {}]’:
2021-07-21T11:22:21,017   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:21,017    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:22:21,017         |          ^~~~~~~~~~~~~
2021-07-21T11:22:21,017   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:21,017   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:21,073   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_mol(pybind11::module&)::<lambda(const gemmi::Residue&)>, pybind11::iterator, {const gemmi::Residue&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:21,073   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1950:78: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:21,074    1950 |     return make_iterator<Policy>(std::begin(value), std::end(value), extra...);
2021-07-21T11:22:21,074         |                                                                              ^
2021-07-21T11:22:21,951   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >; Sentinel = gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’:
2021-07-21T11:22:21,951   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:21,952    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:22:21,952         |          ^~~~~~~~~~~~~
2021-07-21T11:22:21,952   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:22,011   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_mol(pybind11::module&)::<lambda(gemmi::UniqProxy<gemmi::Atom>&)>, pybind11::iterator, {gemmi::UniqProxy<gemmi::Atom, std::vector<gemmi::Atom, std::allocator<gemmi::Atom> > >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:22,011   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1950:78: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:22,011    1950 |     return make_iterator<Policy>(std::begin(value), std::end(value), extra...);
2021-07-21T11:22:22,012         |                                                                              ^
2021-07-21T11:22:22,012   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1950:78: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:22,012   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1950:78: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:33,984   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:33,985                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:33,985                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:33,985                    from python/mol.cpp:3:
2021-07-21T11:22:33,985   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:22:33,985   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2021-07-21T11:22:33,985     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:22:33,985         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,255   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, pybind11::iterable)>’:
2021-07-21T11:22:34,255   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:34,255     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:22:34,255         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,257   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:34,257                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:34,257                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:34,257                    from python/mol.cpp:3:
2021-07-21T11:22:34,257   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:34,257    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:22:34,257         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,571   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:34,571                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:34,572                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:34,572                    from python/mol.cpp:3:
2021-07-21T11:22:34,572   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(pybind11::iterable)>’:
2021-07-21T11:22:34,572   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:34,572     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:22:34,572         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,774   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:22:34,774   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2021-07-21T11:22:34,774     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:22:34,774         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,835   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, pybind11::iterable)>, void, {pybind11::detail::value_and_holder&, pybind11::iterable}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:34,835   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:34,835     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:22:34,836         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,937   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, pybind11::iterable)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, pybind11::iterable}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:34,937   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:34,937     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:22:34,937         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:34,938   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:34,938                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:34,938                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:34,938                    from python/mol.cpp:3:
2021-07-21T11:22:34,939   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:34,939    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:22:34,939         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:35,537   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:35,537                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:35,537                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:35,537                    from python/mol.cpp:3:
2021-07-21T11:22:35,537   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Assembly}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:22:35,537   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2021-07-21T11:22:35,537     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:22:35,538         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:36,591   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2021-07-21T11:22:36,591   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2021-07-21T11:22:36,687   /usr/include/c++/10/bits/vector.tcc: In function ‘C& add_child(P&, C, int) [with P = gemmi::Residue; C = gemmi::Atom]’:
2021-07-21T11:22:36,688   /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:36,688     356 |  _M_realloc_insert(begin() + __n, std::move(__v));
2021-07-21T11:22:36,688         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:36,959   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:36,959                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:36,959                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:36,959                    from python/mol.cpp:3:
2021-07-21T11:22:36,959   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, DiffType)>, gemmi::NcsOp, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:36,960   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:36,960    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:36,960         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:37,005   In file included from python/mol.cpp:19:
2021-07-21T11:22:37,005   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, DiffType, const T&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, int, const gemmi::NcsOp&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:37,005   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:183:21: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::const_iterator’ changed in GCC 7.1
2021-07-21T11:22:37,006     183 |             v.insert(v.begin() + i, x);
2021-07-21T11:22:37,006         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2021-07-21T11:22:37,080   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, DiffType, const T&)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, int, const gemmi::Connection&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:37,081   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:183:21: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::const_iterator’ changed in GCC 7.1
2021-07-21T11:22:37,081     183 |             v.insert(v.begin() + i, x);
2021-07-21T11:22:37,081         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2021-07-21T11:22:37,873   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:37,873                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:37,873                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:37,873                    from python/mol.cpp:3:
2021-07-21T11:22:37,873   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, DiffType)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:37,874   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:37,874    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:37,874         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:37,910   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, DiffType)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:37,910   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:37,910    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:37,910         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:37,972   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, DiffType)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:37,973   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:22:37,973    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:37,973         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:38,079   /usr/include/c++/10/bits/stl_vector.h: In function ‘pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, DiffType)>, gemmi::Connection, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>’:
2021-07-21T11:22:38,080   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:22:38,080    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:38,080         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:41,163   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_mol(pybind11::module&)::<lambda(gemmi::Residue&, const string&, char)>, void, {gemmi::Residue&, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, char}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:41,163   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:22:41,163    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:41,163         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:41,926   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:41,927                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:41,927                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:41,927                    from python/mol.cpp:3:
2021-07-21T11:22:41,927   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Assembly&}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:22:41,927   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2021-07-21T11:22:41,927     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:22:41,927         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:41,999   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:41,999                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:41,999                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:41,999                    from python/mol.cpp:3:
2021-07-21T11:22:41,999   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, const T&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, const gemmi::Assembly&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:42,000   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,000    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:22:42,000         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:22:42,090   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:42,090                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:42,090                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:42,090                    from python/mol.cpp:3:
2021-07-21T11:22:42,090   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:22:42,091   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::const_iterator’ changed in GCC 7.1
2021-07-21T11:22:42,091     130 |     vector<_Tp, _Alloc>::
2021-07-21T11:22:42,091         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,091   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,092     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2021-07-21T11:22:42,092         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,180   In file included from python/mol.cpp:19:
2021-07-21T11:22:42,181   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, DiffType, const T&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, int, const gemmi::Assembly&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:42,181   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:183:21: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::const_iterator’ changed in GCC 7.1
2021-07-21T11:22:42,181     183 |             v.insert(v.begin() + i, x);
2021-07-21T11:22:42,181         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,274   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:42,275                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:42,275                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:42,275                    from python/mol.cpp:3:
2021-07-21T11:22:42,275   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, pybind11::iterable)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, pybind11::iterable}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:42,275   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,275     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:22:42,275         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,275   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:42,276                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:42,276                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:42,276                    from python/mol.cpp:3:
2021-07-21T11:22:42,276   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,276    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:22:42,276         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,419   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, DiffType)>, gemmi::Assembly, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:42,419   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,419    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:22:42,420         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,504   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:22:42,504                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:42,504                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:42,504                    from python/mol.cpp:3:
2021-07-21T11:22:42,505   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, pybind11::iterable)>, void, {pybind11::detail::value_and_holder&, pybind11::iterable}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:42,505   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,505     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:22:42,505         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:42,571   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:22:42,572                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:42,572                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:42,572                    from python/mol.cpp:3:
2021-07-21T11:22:42,572   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(const std::vector<gemmi::Assembly>&, pybind11::slice)>, std::vector<gemmi::Assembly>*, {const std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:42,572   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,572    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:22:42,572         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:22:42,688   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:22:42,688                    from include/gemmi/model.hpp:15,
2021-07-21T11:22:42,688                    from include/gemmi/align.hpp:8,
2021-07-21T11:22:42,688                    from python/mol.cpp:3:
2021-07-21T11:22:42,688   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’:
2021-07-21T11:22:42,688   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:42,689      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:22:42,689         |         ^~~~~~~~~~~~~
2021-07-21T11:22:42,689   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:43,155   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, const std::vector<gemmi::Assembly>&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, const std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:22:43,155   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:43,155     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:43,156         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,156     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:43,156         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,156     149 |            && __assignable>::
2021-07-21T11:22:43,156         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,156     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:43,156         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,156   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:22:43,157     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:43,157         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,157     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:43,157         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,157     149 |            && __assignable>::
2021-07-21T11:22:43,157         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,157     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:43,157         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,372   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’:
2021-07-21T11:22:43,372   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:22:43,372      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:22:43,372         |         ^~~~~~~~~~~~~
2021-07-21T11:22:43,373   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:22:43,373   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:22:43,500   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:22:43,501   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,501   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,503   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:22:43,503     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:43,503         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,503     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:43,503         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,503     149 |            && __assignable>::
2021-07-21T11:22:43,504         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,504     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:43,504         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,703   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:22:43,703   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,703      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:22:43,703         |         ^~~~~~~~~~~~~
2021-07-21T11:22:43,704   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,796   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’:
2021-07-21T11:22:43,796   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,796     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:43,796         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,797     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:43,797         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,797     149 |            && __assignable>::
2021-07-21T11:22:43,797         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,797     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:43,797         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,797   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,798     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:43,798         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,798     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:43,798         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,798     149 |            && __assignable>::
2021-07-21T11:22:43,798         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,798     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:43,798         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,798   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:22:43,799     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:22:43,799         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,799     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:22:43,799         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,799     149 |            && __assignable>::
2021-07-21T11:22:43,799         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:43,799     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:22:43,799         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:22:45,551   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/monlib.cpp -o build/temp.linux-armv7l-3.9/python/monlib.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:23:40,921   In file included from /usr/include/c++/10/algorithm:61,
2021-07-21T11:23:40,921                    from include/gemmi/model.hpp:8,
2021-07-21T11:23:40,921                    from include/gemmi/align.hpp:8,
2021-07-21T11:23:40,921                    from python/monlib.cpp:3:
2021-07-21T11:23:40,921   /usr/include/c++/10/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<gemmi::Restraints::get_plane(const string&)::<lambda(const gemmi::Restraints::Plane&)> >]’:
2021-07-21T11:23:40,922   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:23:40,922    1921 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
2021-07-21T11:23:40,922         |     ^~~~~~~~~
2021-07-21T11:23:40,922   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:23:43,313   /usr/include/c++/10/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<gemmi::Restraints::find_bond<std::__cxx11::basic_string<char> >::<lambda(const gemmi::Restraints::Bond&)> >]’:
2021-07-21T11:23:43,313   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:23:43,314   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:23:50,670   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:23:50,670                    from include/gemmi/model.hpp:15,
2021-07-21T11:23:50,670                    from include/gemmi/align.hpp:8,
2021-07-21T11:23:50,670                    from python/monlib.cpp:3:
2021-07-21T11:23:50,670   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:23:50,670   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2021-07-21T11:23:50,671     171 |     vector<_Tp, _Alloc>::
2021-07-21T11:23:50,671         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:51,023   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator<gemmi::Fractional>]’:
2021-07-21T11:23:51,023   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Fractional>::iterator’ changed in GCC 7.1
2021-07-21T11:23:51,023     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:23:51,023         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:51,116   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:23:51,116                    from include/gemmi/model.hpp:15,
2021-07-21T11:23:51,117                    from include/gemmi/align.hpp:8,
2021-07-21T11:23:51,117                    from python/monlib.cpp:3:
2021-07-21T11:23:51,117   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’:
2021-07-21T11:23:51,117   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Fractional*, std::vector<gemmi::Fractional> >’ changed in GCC 7.1
2021-07-21T11:23:51,117    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:23:51,117         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:23:55,665   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:23:55,666                    from include/gemmi/model.hpp:15,
2021-07-21T11:23:55,666                    from include/gemmi/align.hpp:8,
2021-07-21T11:23:55,666                    from python/monlib.cpp:3:
2021-07-21T11:23:55,666   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2021-07-21T11:23:55,666   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2021-07-21T11:23:55,666     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:23:55,666         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:55,710   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2021-07-21T11:23:55,711   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:23:55,711     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:23:55,711         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:55,756   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:23:55,756   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2021-07-21T11:23:55,756     184 |     vector<_Tp, _Alloc>::
2021-07-21T11:23:55,757         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:55,757   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2021-07-21T11:23:55,818   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2021-07-21T11:23:55,818   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2021-07-21T11:23:55,819   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2021-07-21T11:23:55,870   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2021-07-21T11:23:55,870   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2021-07-21T11:23:55,870   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2021-07-21T11:23:56,265   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:23:56,265                    from include/gemmi/model.hpp:15,
2021-07-21T11:23:56,266                    from include/gemmi/align.hpp:8,
2021-07-21T11:23:56,266                    from python/monlib.cpp:3:
2021-07-21T11:23:56,266   /usr/include/c++/10/bits/stl_vector.h: In member function ‘gemmi::ChemComp& gemmi::ChemComp::remove_hydrogens()’:
2021-07-21T11:23:56,266   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:23:56,266    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:23:56,266         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,267   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2021-07-21T11:23:56,267    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:23:56,267         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,268   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2021-07-21T11:23:56,268    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:23:56,268         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,641   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:23:56,641                    from include/gemmi/model.hpp:15,
2021-07-21T11:23:56,641                    from include/gemmi/align.hpp:8,
2021-07-21T11:23:56,641                    from python/monlib.cpp:3:
2021-07-21T11:23:56,641   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:23:56,642   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2021-07-21T11:23:56,642     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:23:56,642         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,702   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:23:56,702   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:23:56,702     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:23:56,702         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,766   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2021-07-21T11:23:56,766   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2021-07-21T11:23:56,766     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:23:56,766         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,837   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2021-07-21T11:23:56,837   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2021-07-21T11:23:56,837     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:23:56,837         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:56,937   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2021-07-21T11:23:56,937   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2021-07-21T11:23:56,938     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:23:56,938         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:57,037   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2021-07-21T11:23:57,038   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2021-07-21T11:23:57,038     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:23:57,038         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:23:57,501   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2021-07-21T11:23:57,501   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2021-07-21T11:23:57,501     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:23:57,501         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:00,085   In file included from /usr/include/c++/10/algorithm:61,
2021-07-21T11:24:00,085                    from include/gemmi/model.hpp:8,
2021-07-21T11:24:00,085                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:00,086                    from python/monlib.cpp:3:
2021-07-21T11:24:00,086   /usr/include/c++/10/bits/stl_algobase.h: In function ‘gemmi::ChemComp gemmi::make_chemcomp_from_block(const gemmi::cif::Block&)’:
2021-07-21T11:24:00,086   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:00,086    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:00,086         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:00,086    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:00,086         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:00,701   /usr/include/c++/10/bits/stl_algobase.h: In function ‘gemmi::Restraints gemmi::read_link_restraints(const gemmi::cif::Block&)’:
2021-07-21T11:24:00,701   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:00,702    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:00,702         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:00,702    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:00,702         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:01,125   /usr/include/c++/10/bits/stl_algobase.h: In function ‘gemmi::Restraints gemmi::read_restraint_modifications(const gemmi::cif::Block&)’:
2021-07-21T11:24:01,125   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:01,125    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:01,125         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:01,125    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:01,126         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:01,548   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:24:01,548                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:01,548                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:01,548                    from python/monlib.cpp:3:
2021-07-21T11:24:01,548   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:24:01,548   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2021-07-21T11:24:01,548     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:24:01,548         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:01,656   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:24:01,657   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::const_iterator’ changed in GCC 7.1
2021-07-21T11:24:01,657     130 |     vector<_Tp, _Alloc>::
2021-07-21T11:24:01,657         |     ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:01,659   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:01,659     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2021-07-21T11:24:01,660         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,012   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2021-07-21T11:24:02,013   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2021-07-21T11:24:02,013     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:24:02,013         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,654   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:02,654                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:02,654                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:02,654                    from python/monlib.cpp:3:
2021-07-21T11:24:02,655   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’:
2021-07-21T11:24:02,655   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:02,655    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:24:02,655         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,658   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2021-07-21T11:24:02,658    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:24:02,658         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,660   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2021-07-21T11:24:02,661    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:24:02,661         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,664   In file included from /usr/include/c++/10/algorithm:61,
2021-07-21T11:24:02,664                    from include/gemmi/model.hpp:8,
2021-07-21T11:24:02,664                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:02,664                    from python/monlib.cpp:3:
2021-07-21T11:24:02,665   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:02,665    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:02,665         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,665    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:02,665         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,666   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:02,666                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:02,666                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:02,666                    from python/monlib.cpp:3:
2021-07-21T11:24:02,666   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:02,666    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:24:02,666         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:24:02,667   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:02,667    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:24:02,667         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,670   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2021-07-21T11:24:02,670    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:24:02,670         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:24:02,672   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2021-07-21T11:24:02,672    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:24:02,673         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:24:02,675   In file included from /usr/include/c++/10/algorithm:61,
2021-07-21T11:24:02,675                    from include/gemmi/model.hpp:8,
2021-07-21T11:24:02,675                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:02,676                    from python/monlib.cpp:3:
2021-07-21T11:24:02,676   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:02,676    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:02,676         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,676    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:02,676         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,677   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:02,677    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:02,677         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:02,678    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:02,678         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:06,516   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:24:06,516                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:06,516                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:06,516                    from python/monlib.cpp:3:
2021-07-21T11:24:06,516   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:06,517   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:24:06,517      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:24:06,517         |         ^~~~~~~~~~~~~
2021-07-21T11:24:06,517   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:24:07,445   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:07,445   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:07,446   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:07,522   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2021-07-21T11:24:07,523   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:07,523     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:07,523         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,523     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:07,523         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,523     149 |            && __assignable>::
2021-07-21T11:24:07,523         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,524     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:07,524         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,608   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:07,608   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:07,609      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:24:07,609         |         ^~~~~~~~~~~~~
2021-07-21T11:24:07,609   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:07,716   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2021-07-21T11:24:07,716   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:07,717     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:07,717         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,717     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:07,717         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,717     149 |            && __assignable>::
2021-07-21T11:24:07,717         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:07,717     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:07,717         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,661   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:13,662                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:13,662                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:13,662                    from python/monlib.cpp:3:
2021-07-21T11:24:13,662   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, pybind11::slice)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:13,662   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:13,662    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:24:13,662         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,818   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:24:13,818                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:13,818                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:13,818                    from python/monlib.cpp:3:
2021-07-21T11:24:13,818   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, const std::vector<gemmi::Restraints::Bond>&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, const std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:13,818   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:13,819     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:13,819         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,819     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:13,819         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,819     149 |            && __assignable>::
2021-07-21T11:24:13,819         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,819     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:13,819         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,820   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:13,820     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:13,820         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,820     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:13,820         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,820     149 |            && __assignable>::
2021-07-21T11:24:13,820         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,820     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:13,820         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:13,881   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:13,881                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:13,882                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:13,882                    from python/monlib.cpp:3:
2021-07-21T11:24:13,882   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, const T&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, const gemmi::Restraints::Bond&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:13,882   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:13,882    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:24:13,882         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:24:14,855   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:24:14,855                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:14,856                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:14,856                    from python/monlib.cpp:3:
2021-07-21T11:24:14,856   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, pybind11::iterable)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, pybind11::iterable}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:14,856   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:14,856     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:24:14,856         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:14,856   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:14,857                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:14,857                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:14,857                    from python/monlib.cpp:3:
2021-07-21T11:24:14,857   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:14,857    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2021-07-21T11:24:14,857         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:16,946   In file included from /usr/include/c++/10/algorithm:61,
2021-07-21T11:24:16,946                    from include/gemmi/model.hpp:8,
2021-07-21T11:24:16,946                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:16,946                    from python/monlib.cpp:3:
2021-07-21T11:24:16,946   /usr/include/c++/10/bits/stl_algobase.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_monlib(pybind11::module&)::<lambda(gemmi::Restraints&, const string&, const string&)>, gemmi::Restraints::Bond&, {gemmi::Restraints&, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:16,946   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:16,947    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:24:16,947         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:16,947    1975 |          std::__iterator_category(__first));
2021-07-21T11:24:16,947         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:17,008   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:17,009                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:17,009                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:17,009                    from python/monlib.cpp:3:
2021-07-21T11:24:17,009   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(const std::vector<gemmi::Restraints::Bond>&, pybind11::slice)>, std::vector<gemmi::Restraints::Bond>*, {const std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:17,009   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:17,009    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:24:17,009         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:24:23,279   In file included from python/monlib.cpp:13:
2021-07-21T11:24:23,280   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’:
2021-07-21T11:24:23,280   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:23,280    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:24:23,280         |          ^~~~~~~~~~~~~
2021-07-21T11:24:23,280   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:23,336   In file included from python/monlib.cpp:15:
2021-07-21T11:24:23,336   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&)>, pybind11::iterator, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:23,337   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:318:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:23,337     318 |                    v.begin(), v.end());
2021-07-21T11:24:23,337         |                                      ^
2021-07-21T11:24:23,366   In file included from python/monlib.cpp:13:
2021-07-21T11:24:23,366   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >; Sentinel = gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’:
2021-07-21T11:24:23,366   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:24:23,366    1895 | iterator make_iterator(Iterator first, Sentinel last, Extra &&... extra) {
2021-07-21T11:24:23,366         |          ^~~~~~~~~~~~~
2021-07-21T11:24:23,367   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1895:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:24:23,427   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::FilterProxy<gemmi::Selection, gemmi::Atom>; Extra = {}]’:
2021-07-21T11:24:23,427   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1950:78: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:24:23,427    1950 |     return make_iterator<Policy>(std::begin(value), std::end(value), extra...);
2021-07-21T11:24:23,427         |                                                                              ^
2021-07-21T11:24:23,428   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:1950:78: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:24:34,945   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:24:34,946                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:34,946                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:34,946                    from python/monlib.cpp:3:
2021-07-21T11:24:34,946   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’:
2021-07-21T11:24:34,946   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2021-07-21T11:24:34,946     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:34,946         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:34,946     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:34,947         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:34,947     149 |            && __assignable>::
2021-07-21T11:24:34,947         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:34,947     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:34,947         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:35,519   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:35,519                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:35,519                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:35,519                    from python/monlib.cpp:3:
2021-07-21T11:24:35,520   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::Topo::initialize_refmac_topology(const gemmi::Structure&, gemmi::Model&, gemmi::MonLib&)’:
2021-07-21T11:24:35,520   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:35,520    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:24:35,520         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:24:36,996   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, DiffType)>, gemmi::Restraints::Bond, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:36,996   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:36,996    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:24:36,996         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:37,041   In file included from python/monlib.cpp:15:
2021-07-21T11:24:37,041   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, DiffType, const T&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, int, const gemmi::Restraints::Bond&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:37,042   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:183:21: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::const_iterator’ changed in GCC 7.1
2021-07-21T11:24:37,042     183 |             v.insert(v.begin() + i, x);
2021-07-21T11:24:37,042         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2021-07-21T11:24:37,508   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:24:37,508                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:37,508                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:37,508                    from python/monlib.cpp:3:
2021-07-21T11:24:37,508   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, DiffType)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2021-07-21T11:24:37,508   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2021-07-21T11:24:37,508    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2021-07-21T11:24:37,509         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:38,646   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:24:38,646                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:38,647                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:38,647                    from python/monlib.cpp:3:
2021-07-21T11:24:38,647   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:38,647   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:24:38,647      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:24:38,647         |         ^~~~~~~~~~~~~
2021-07-21T11:24:38,647   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:24:40,157   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:24:40,158                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:40,158                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:40,158                    from python/monlib.cpp:3:
2021-07-21T11:24:40,158   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2021-07-21T11:24:40,158   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2021-07-21T11:24:40,158     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:24:40,158         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:40,330   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::Selection::add_matching_children(const T&, T&) [with T = gemmi::Model]’:
2021-07-21T11:24:40,331   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:24:40,331     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:24:40,331         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:41,392   In file included from /usr/include/c++/10/vector:66,
2021-07-21T11:24:41,392                    from include/gemmi/model.hpp:15,
2021-07-21T11:24:41,393                    from include/gemmi/align.hpp:8,
2021-07-21T11:24:41,393                    from python/monlib.cpp:3:
2021-07-21T11:24:41,393   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:41,393   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:24:41,393      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:24:41,393         |         ^~~~~~~~~~~~~
2021-07-21T11:24:41,393   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:24:42,113   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:42,113   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:24:42,113   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:24:42,354   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’:
2021-07-21T11:24:42,354   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:24:42,355   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:24:42,453   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’:
2021-07-21T11:24:42,453   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:24:42,454     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:42,454         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,454     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:42,454         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,454     149 |            && __assignable>::
2021-07-21T11:24:42,454         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,454     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:42,454         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,552   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’:
2021-07-21T11:24:42,553   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:24:42,553     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:42,553         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,553     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:42,553         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,553     149 |            && __assignable>::
2021-07-21T11:24:42,554         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,554     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:42,554         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,554   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:24:42,554     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:42,554         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,554     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:42,554         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,555     149 |            && __assignable>::
2021-07-21T11:24:42,555         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,555     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:42,555         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,688   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Structure::Structure(const gemmi::Structure&)’:
2021-07-21T11:24:42,688   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:24:42,688     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:42,689         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,689     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:42,689         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,689     149 |            && __assignable>::
2021-07-21T11:24:42,689         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,689     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:42,689         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,690   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:24:42,690     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:42,690         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,690     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:42,690         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,690     149 |            && __assignable>::
2021-07-21T11:24:42,690         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,690     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:42,691         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,909   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator<gemmi::TlsGroup>]’:
2021-07-21T11:24:42,909   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:24:42,909     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:42,909         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,910     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:42,910         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,910     149 |            && __assignable>::
2021-07-21T11:24:42,910         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:42,910     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:42,910         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,887   /usr/include/c++/10/bits/stl_uninitialized.h: In member function ‘gemmi::Structure gemmi::Structure::empty_copy() const’:
2021-07-21T11:24:43,887   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:24:43,887     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:43,887         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,887     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:43,888         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,888     149 |            && __assignable>::
2021-07-21T11:24:43,888         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,888     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:43,888         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,894   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:24:43,895     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:43,895         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,895     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:43,895         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,895     149 |            && __assignable>::
2021-07-21T11:24:43,895         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,895     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:43,896         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,897   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:24:43,897     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:43,897         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,897     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:43,898         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,898     149 |            && __assignable>::
2021-07-21T11:24:43,898         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,898     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:43,898         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,900   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:24:43,900     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:24:43,900         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,900     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:24:43,900         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,901     149 |            && __assignable>::
2021-07-21T11:24:43,901         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:43,901     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:24:43,901         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:24:46,361   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/read.cpp -o build/temp.linux-armv7l-3.9/python/read.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:25:18,206   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/rule_info.hpp:8,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:14,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:18,207                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:18,208                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:18,208                    from python/read.cpp:3:
2021-07-21T11:25:18,208   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:25:18,208   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:25:18,208     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:18,208         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:18,249   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:25:18,249   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:25:19,050   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Oper; _Alloc = std::allocator<gemmi::Assembly::Oper>]’:
2021-07-21T11:25:19,051   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Oper>::iterator’ changed in GCC 7.1
2021-07-21T11:25:19,105   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Oper; _Alloc = std::allocator<gemmi::Assembly::Oper>]’:
2021-07-21T11:25:19,105   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Oper*, std::vector<gemmi::Assembly::Oper> >’ changed in GCC 7.1
2021-07-21T11:25:19,105     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:19,106         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,321   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator<gemmi::RefinementInfo>]’:
2021-07-21T11:25:19,321   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::RefinementInfo>::iterator’ changed in GCC 7.1
2021-07-21T11:25:19,321     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:19,321         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,472   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator<gemmi::RefinementInfo>]’:
2021-07-21T11:25:19,472   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:25:19,472     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:19,472         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,525   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator<gemmi::ExperimentInfo>]’:
2021-07-21T11:25:19,525   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::ExperimentInfo>::iterator’ changed in GCC 7.1
2021-07-21T11:25:19,525     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:19,525         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,589   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator<gemmi::ExperimentInfo>]’:
2021-07-21T11:25:19,589   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:25:19,589     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:19,589         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,655   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator<gemmi::CrystalInfo>]’:
2021-07-21T11:25:19,655   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::CrystalInfo>::iterator’ changed in GCC 7.1
2021-07-21T11:25:19,656     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:19,656         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,721   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator<gemmi::CrystalInfo>]’:
2021-07-21T11:25:19,721   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:25:19,721     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:19,721         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:19,890   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator<gemmi::DiffractionInfo>]’:
2021-07-21T11:25:19,890   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::DiffractionInfo>::iterator’ changed in GCC 7.1
2021-07-21T11:25:19,890     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:19,891         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:20,087   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator<gemmi::DiffractionInfo>]’:
2021-07-21T11:25:20,088   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::DiffractionInfo*, std::vector<gemmi::DiffractionInfo> >’ changed in GCC 7.1
2021-07-21T11:25:20,088     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:20,088         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:20,509   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2021-07-21T11:25:20,509   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2021-07-21T11:25:20,510     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:20,510         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:20,582   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2021-07-21T11:25:20,582   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2021-07-21T11:25:20,582     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:20,582         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:20,787   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::AtomType&}; _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator<gemmi::SmallStructure::AtomType>]’:
2021-07-21T11:25:20,787   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::AtomType>::iterator’ changed in GCC 7.1
2021-07-21T11:25:20,788     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:20,788         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:20,865   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator<gemmi::TlsGroup>]’:
2021-07-21T11:25:20,865   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::TlsGroup>::iterator’ changed in GCC 7.1
2021-07-21T11:25:20,921   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator<gemmi::TlsGroup>]’:
2021-07-21T11:25:20,921   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:25:20,922     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:20,922         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:21,037   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator<gemmi::BasicRefinementInfo>]’:
2021-07-21T11:25:21,037   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::BasicRefinementInfo>::iterator’ changed in GCC 7.1
2021-07-21T11:25:21,037     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:21,037         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:21,084   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator<gemmi::ReflectionsInfo>]’:
2021-07-21T11:25:21,084   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::ReflectionsInfo>::iterator’ changed in GCC 7.1
2021-07-21T11:25:21,211   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::pdb_impl::read_remark_200_230_240(const char*, gemmi::Metadata&, std::string*&)’:
2021-07-21T11:25:21,211   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflectionsInfo*, std::vector<gemmi::ReflectionsInfo> >’ changed in GCC 7.1
2021-07-21T11:25:21,211     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:21,211         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:22,846   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2021-07-21T11:25:22,847   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:25:22,847     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:22,847         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:22,847   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2021-07-21T11:25:22,929   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’:
2021-07-21T11:25:22,929   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:25:22,929     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:22,929         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:23,057   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::Structure::setup_cell_images()’:
2021-07-21T11:25:23,057   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:25:23,057     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:23,057         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:23,058   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2021-07-21T11:25:23,058     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:23,058         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:23,543   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:25:23,543   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2021-07-21T11:25:23,543     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:23,543         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:23,707   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2021-07-21T11:25:23,707   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:25:23,708     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:23,708         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:24,095   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:25:24,096   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2021-07-21T11:25:24,096     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:24,096         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:24,166   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2021-07-21T11:25:24,167   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:25:24,167     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:24,167         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:24,292   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:25:24,292   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2021-07-21T11:25:24,293     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:24,293         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:24,327   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2021-07-21T11:25:24,327   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2021-07-21T11:25:24,328     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:24,328         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:25,690   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::impl::read_connectivity(gemmi::cif::Block&, gemmi::Structure&)’:
2021-07-21T11:25:25,690   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2021-07-21T11:25:25,690     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:25,690         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:33,418   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Oper&}; _Tp = gemmi::Assembly::Oper; _Alloc = std::allocator<gemmi::Assembly::Oper>]’:
2021-07-21T11:25:33,419   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Oper>::iterator’ changed in GCC 7.1
2021-07-21T11:25:33,419     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:33,419         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:33,615   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:25:33,615                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/rule_info.hpp:8,
2021-07-21T11:25:33,615                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:14,
2021-07-21T11:25:33,615                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:33,616                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:33,616                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:33,616                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:33,616                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:33,616                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:33,616                    from python/read.cpp:3:
2021-07-21T11:25:33,616   /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<gemmi::Assembly> gemmi::impl::read_assemblies(gemmi::cif::Block&)’:
2021-07-21T11:25:33,617   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Oper*, std::vector<gemmi::Assembly::Oper> >’ changed in GCC 7.1
2021-07-21T11:25:33,617    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:25:33,617         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:25:34,387   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:25:34,387                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/rule_info.hpp:8,
2021-07-21T11:25:34,388                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:14,
2021-07-21T11:25:34,388                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:34,388                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:34,388                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:34,388                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:34,388                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:34,388                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:34,388                    from python/read.cpp:3:
2021-07-21T11:25:34,389   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2021-07-21T11:25:34,389   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2021-07-21T11:25:34,389     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:34,389         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:34,649   In file included from /usr/include/c++/10/vector:67,
2021-07-21T11:25:34,649                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/rule_info.hpp:8,
2021-07-21T11:25:34,649                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:14,
2021-07-21T11:25:34,649                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:34,650                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:34,650                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:34,650                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:34,650                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:34,650                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:34,650                    from python/read.cpp:3:
2021-07-21T11:25:34,650   /usr/include/c++/10/bits/stl_vector.h: In function ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const gemmi::cif::Block&)’:
2021-07-21T11:25:34,650   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2021-07-21T11:25:34,651    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:25:34,651         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:25:34,654   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::AtomType*, std::vector<gemmi::SmallStructure::AtomType> >’ changed in GCC 7.1
2021-07-21T11:25:34,654    1198 |    _M_realloc_insert(end(), __x);
2021-07-21T11:25:34,654         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2021-07-21T11:25:36,663   In file included from /usr/include/c++/10/memory:66,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/../internal/demangle_cxxabi.hpp:9,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/../internal/demangle.hpp:13,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:12,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:36,664                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:36,665                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:36,665                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:36,665                    from python/read.cpp:3:
2021-07-21T11:25:36,665   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:25:36,665   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:25:36,665      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:25:36,665         |         ^~~~~~~~~~~~~
2021-07-21T11:25:36,665   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:25:39,216   In file included from /usr/include/c++/10/vector:72,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/rule_info.hpp:8,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:14,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:39,217                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:39,217                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:39,218                    from python/read.cpp:3:
2021-07-21T11:25:39,218   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator<gemmi::RefinementInfo::Restr>]’:
2021-07-21T11:25:39,218   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::RefinementInfo::Restr>::iterator’ changed in GCC 7.1
2021-07-21T11:25:39,218     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:39,218         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:39,289   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::pdb_impl::add_restraint_count_weight(gemmi::RefinementInfo&, const char*, const char*)’:
2021-07-21T11:25:39,289   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::RefinementInfo::Restr*, std::vector<gemmi::RefinementInfo::Restr> >’ changed in GCC 7.1
2021-07-21T11:25:39,289     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:39,290         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:39,352   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator<gemmi::RefinementInfo::Restr>]’:
2021-07-21T11:25:39,352   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::RefinementInfo::Restr>::iterator’ changed in GCC 7.1
2021-07-21T11:25:39,352     426 |       vector<_Tp, _Alloc>::
2021-07-21T11:25:39,352         |       ^~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:39,430   /usr/include/c++/10/bits/vector.tcc: In function ‘T& gemmi::impl::find_or_add(std::vector<Value>&, const string&) [with T = gemmi::RefinementInfo::Restr]’:
2021-07-21T11:25:39,431   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::RefinementInfo::Restr*, std::vector<gemmi::RefinementInfo::Restr> >’ changed in GCC 7.1
2021-07-21T11:25:39,431     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:39,431         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:39,573   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’:
2021-07-21T11:25:39,574   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::BasicRefinementInfo*, std::vector<gemmi::BasicRefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:25:39,574     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2021-07-21T11:25:39,574         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,231   In file included from /usr/include/c++/10/memory:66,
2021-07-21T11:25:44,231                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/../internal/demangle_cxxabi.hpp:9,
2021-07-21T11:25:44,231                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/../internal/demangle.hpp:13,
2021-07-21T11:25:44,232                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:12,
2021-07-21T11:25:44,232                    from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9,
2021-07-21T11:25:44,232                    from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11,
2021-07-21T11:25:44,232                    from include/gemmi/third_party/tao/pegtl/eol.hpp:9,
2021-07-21T11:25:44,232                    from include/gemmi/third_party/tao/pegtl/ascii.hpp:8,
2021-07-21T11:25:44,232                    from include/gemmi/third_party/tao/pegtl.hpp:10,
2021-07-21T11:25:44,232                    from include/gemmi/numb.hpp:13,
2021-07-21T11:25:44,232                    from python/read.cpp:3:
2021-07-21T11:25:44,232   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’:
2021-07-21T11:25:44,233   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:25:44,233      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:25:44,233         |         ^~~~~~~~~~~~~
2021-07-21T11:25:44,233   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:25:44,330   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’:
2021-07-21T11:25:44,331   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:25:44,331   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:25:44,464   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:25:44,465   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,465   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,467   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2021-07-21T11:25:44,467     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:25:44,467         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,467     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:25:44,467         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,468     149 |            && __assignable>::
2021-07-21T11:25:44,468         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,468     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:25:44,468         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,719   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’:
2021-07-21T11:25:44,719   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,720      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2021-07-21T11:25:44,720         |         ^~~~~~~~~~~~~
2021-07-21T11:25:44,720   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,812   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’:
2021-07-21T11:25:44,813   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,813     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:25:44,813         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,813     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:25:44,813         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,813     149 |            && __assignable>::
2021-07-21T11:25:44,813         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,813     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:25:44,814         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,814   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,814     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:25:44,814         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,814     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:25:44,814         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,814     149 |            && __assignable>::
2021-07-21T11:25:44,815         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,815     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:25:44,815         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,815   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:25:44,815     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:25:44,815         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,815     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:25:44,815         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,816     149 |            && __assignable>::
2021-07-21T11:25:44,816         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,816     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:25:44,816         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,976   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Structure::Structure(const gemmi::Structure&)’:
2021-07-21T11:25:44,977   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2021-07-21T11:25:44,977     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2021-07-21T11:25:44,977         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,977     148 |            && __is_trivial(_ValueType2)
2021-07-21T11:25:44,977         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,977     149 |            && __assignable>::
2021-07-21T11:25:44,978         |            ~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:44,978     150 |  __uninit_copy(__first, __last, __result);
2021-07-21T11:25:44,978         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:25:50,467   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/sym.cpp -o build/temp.linux-armv7l-3.9/python/sym.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:26:31,544   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/unitcell.cpp -o build/temp.linux-armv7l-3.9/python/unitcell.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:27:09,983   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/write.cpp -o build/temp.linux-armv7l-3.9/python/write.o -DVERSION_INFO="0.4.3" -std=c++14 -fvisibility=hidden -g0
2021-07-21T11:27:19,851   In file included from /usr/include/c++/10/bits/char_traits.h:39,
2021-07-21T11:27:19,852                    from /usr/include/c++/10/string:40,
2021-07-21T11:27:19,852                    from include/gemmi/sprintf.hpp:19,
2021-07-21T11:27:19,852                    from python/write.cpp:4:
2021-07-21T11:27:19,852   /usr/include/c++/10/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<gemmi::Metadata::has(std::string gemmi::RefinementInfo::*) const::<lambda(const gemmi::RefinementInfo&)> >]’:
2021-07-21T11:27:19,852   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:19,852    1921 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
2021-07-21T11:27:19,852         |     ^~~~~~~~~
2021-07-21T11:27:19,853   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:19,880   /usr/include/c++/10/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<gemmi::Metadata::has(double gemmi::RefinementInfo::*) const::<lambda(const gemmi::RefinementInfo&)> >]’:
2021-07-21T11:27:19,881   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:19,881   /usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,100   /usr/include/c++/10/bits/stl_algobase.h: In function ‘void gemmi::update_cif_block(const gemmi::Structure&, gemmi::cif::Block&, bool)’:
2021-07-21T11:27:35,100   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,100    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,100         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,101    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,101         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,101   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,101    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,101         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,101    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,101         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,102   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,102    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,102         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,102    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,102         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,102   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,102    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,102         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,103    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,103         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,103   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,103    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,103         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,103    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,104         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,104   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,104    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,104         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,104    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,104         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,104   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,105    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,105         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,105    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,105         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,105   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,105    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,105         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,105    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,105         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,106   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,106    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,106         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,106    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,106         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,106   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,106    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,107         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,107    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,107         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,107   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,107    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,107         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,107    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,107         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,108   /usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2021-07-21T11:27:35,108    1974 |       return __find_if(__first, __last, __pred,
2021-07-21T11:27:35,108         |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:35,108    1975 |          std::__iterator_category(__first));
2021-07-21T11:27:35,108         |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-07-21T11:27:42,450   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/python/cif.o build/temp.linux-armv7l-3.9/python/gemmi.o build/temp.linux-armv7l-3.9/python/grid.o build/temp.linux-armv7l-3.9/python/hkl.o build/temp.linux-armv7l-3.9/python/mol.o build/temp.linux-armv7l-3.9/python/monlib.o build/temp.linux-armv7l-3.9/python/read.o build/temp.linux-armv7l-3.9/python/sym.o build/temp.linux-armv7l-3.9/python/unitcell.o build/temp.linux-armv7l-3.9/python/write.o -Lbuild/temp.linux-armv7l-3.9 -lgemmi_zlib -lgemmi_zlib -o build/lib.linux-armv7l-3.9/gemmi.cpython-39-arm-linux-gnueabihf.so -Wl,-s
2021-07-21T11:27:45,259   installing to build/bdist.linux-armv7l/wheel
2021-07-21T11:27:45,260   running install
2021-07-21T11:27:45,261   running install_lib
2021-07-21T11:27:45,267   creating build/bdist.linux-armv7l
2021-07-21T11:27:45,268   creating build/bdist.linux-armv7l/wheel
2021-07-21T11:27:45,270   copying build/lib.linux-armv7l-3.9/gemmi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2021-07-21T11:27:45,365   creating build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,366   copying build/lib.linux-armv7l-3.9/gemmi-examples/simple_search.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,368   copying build/lib.linux-armv7l-3.9/gemmi-examples/__main__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,370   copying build/lib.linux-armv7l-3.9/gemmi-examples/merge_mtz_mmcif.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,372   copying build/lib.linux-armv7l-3.9/gemmi-examples/col_order.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,374   copying build/lib.linux-armv7l-3.9/gemmi-examples/monomers.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,376   copying build/lib.linux-armv7l-3.9/gemmi-examples/aafreq.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,378   copying build/lib.linux-armv7l-3.9/gemmi-examples/weight.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,380   copying build/lib.linux-armv7l-3.9/gemmi-examples/maskdiff.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,382   copying build/lib.linux-armv7l-3.9/gemmi-examples/cif_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,384   copying build/lib.linux-armv7l-3.9/gemmi-examples/hello.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,385   copying build/lib.linux-armv7l-3.9/gemmi-examples/sub_ccd.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,387   copying build/lib.linux-armv7l-3.9/gemmi-examples/from_json.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,389   copying build/lib.linux-armv7l-3.9/gemmi-examples/long_geom.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,391   copying build/lib.linux-armv7l-3.9/gemmi-examples/map2mtz.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,393   copying build/lib.linux-armv7l-3.9/gemmi-examples/__init__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,395   copying build/lib.linux-armv7l-3.9/gemmi-examples/rama_gather.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,397   copying build/lib.linux-armv7l-3.9/gemmi-examples/patterson_slice.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,399   copying build/lib.linux-armv7l-3.9/gemmi-examples/mtrix_iso.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,401   copying build/lib.linux-armv7l-3.9/gemmi-examples/rama_plot.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,403   copying build/lib.linux-armv7l-3.9/gemmi-examples/ccd_subgraph.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,406   copying build/lib.linux-armv7l-3.9/gemmi-examples/mtz_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,407   copying build/lib.linux-armv7l-3.9/gemmi-examples/matthews.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,410   copying build/lib.linux-armv7l-3.9/gemmi-examples/ccd_gi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2021-07-21T11:27:45,412   running install_egg_info
2021-07-21T11:27:45,439   running egg_info
2021-07-21T11:27:45,441   writing gemmi.egg-info/PKG-INFO
2021-07-21T11:27:45,443   writing dependency_links to gemmi.egg-info/dependency_links.txt
2021-07-21T11:27:45,444   writing requirements to gemmi.egg-info/requires.txt
2021-07-21T11:27:45,445   writing top-level names to gemmi.egg-info/top_level.txt
2021-07-21T11:27:45,485   reading manifest file 'gemmi.egg-info/SOURCES.txt'
2021-07-21T11:27:45,533   reading manifest template 'MANIFEST.in'
2021-07-21T11:27:45,655   adding license file 'LICENSE.txt'
2021-07-21T11:27:45,675   writing manifest file 'gemmi.egg-info/SOURCES.txt'
2021-07-21T11:27:45,677   Copying gemmi.egg-info to build/bdist.linux-armv7l/wheel/gemmi-0.4.3-py3.9.egg-info
2021-07-21T11:27:45,689   running install_scripts
2021-07-21T11:27:45,770   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2021-07-21T11:27:45,775   creating build/bdist.linux-armv7l/wheel/gemmi-0.4.3.dist-info/WHEEL
2021-07-21T11:27:45,778   creating '/tmp/pip-wheel-w_j4vl1w/gemmi-0.4.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-21T11:27:46,519   adding 'gemmi.cpython-39-arm-linux-gnueabihf.so'
2021-07-21T11:27:46,555   adding 'gemmi-examples/__init__.py'
2021-07-21T11:27:46,557   adding 'gemmi-examples/__main__.py'
2021-07-21T11:27:46,558   adding 'gemmi-examples/aafreq.py'
2021-07-21T11:27:46,559   adding 'gemmi-examples/ccd_gi.py'
2021-07-21T11:27:46,560   adding 'gemmi-examples/ccd_subgraph.py'
2021-07-21T11:27:46,561   adding 'gemmi-examples/cif_i_sigi.py'
2021-07-21T11:27:46,563   adding 'gemmi-examples/col_order.py'
2021-07-21T11:27:46,564   adding 'gemmi-examples/from_json.py'
2021-07-21T11:27:46,565   adding 'gemmi-examples/hello.py'
2021-07-21T11:27:46,566   adding 'gemmi-examples/long_geom.py'
2021-07-21T11:27:46,567   adding 'gemmi-examples/map2mtz.py'
2021-07-21T11:27:46,568   adding 'gemmi-examples/maskdiff.py'
2021-07-21T11:27:46,570   adding 'gemmi-examples/matthews.py'
2021-07-21T11:27:46,571   adding 'gemmi-examples/merge_mtz_mmcif.py'
2021-07-21T11:27:46,573   adding 'gemmi-examples/monomers.py'
2021-07-21T11:27:46,574   adding 'gemmi-examples/mtrix_iso.py'
2021-07-21T11:27:46,575   adding 'gemmi-examples/mtz_i_sigi.py'
2021-07-21T11:27:46,576   adding 'gemmi-examples/patterson_slice.py'
2021-07-21T11:27:46,578   adding 'gemmi-examples/rama_gather.py'
2021-07-21T11:27:46,579   adding 'gemmi-examples/rama_plot.py'
2021-07-21T11:27:46,580   adding 'gemmi-examples/simple_search.py'
2021-07-21T11:27:46,581   adding 'gemmi-examples/sub_ccd.py'
2021-07-21T11:27:46,583   adding 'gemmi-examples/weight.py'
2021-07-21T11:27:46,586   adding 'gemmi-0.4.3.dist-info/LICENSE.txt'
2021-07-21T11:27:46,587   adding 'gemmi-0.4.3.dist-info/METADATA'
2021-07-21T11:27:46,588   adding 'gemmi-0.4.3.dist-info/WHEEL'
2021-07-21T11:27:46,589   adding 'gemmi-0.4.3.dist-info/top_level.txt'
2021-07-21T11:27:46,590   adding 'gemmi-0.4.3.dist-info/RECORD'
2021-07-21T11:27:46,620   removing build/bdist.linux-armv7l/wheel
2021-07-21T11:27:46,727   Building wheel for gemmi (setup.py): finished with status 'done'
2021-07-21T11:27:46,750   Created wheel for gemmi: filename=gemmi-0.4.3-cp39-cp39-linux_armv7l.whl size=1644569 sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256
2021-07-21T11:27:46,751   Stored in directory: /tmp/pip-ephem-wheel-cache-xm1lufwx/wheels/47/07/47/92364a8dc2652bce982cc02ef3d1a0f827d16e184dd4501f72
2021-07-21T11:27:46,762 Successfully built gemmi
2021-07-21T11:27:46,825 Removed build tracker: '/tmp/pip-req-tracker-2ga9cqzg'