2021-07-28T15:32:41,019 Created temporary directory: /tmp/pip-ephem-wheel-cache-3hg8ql7h 2021-07-28T15:32:41,023 Created temporary directory: /tmp/pip-req-tracker-kw_xh1rq 2021-07-28T15:32:41,024 Initialized build tracking at /tmp/pip-req-tracker-kw_xh1rq 2021-07-28T15:32:41,024 Created build tracker: /tmp/pip-req-tracker-kw_xh1rq 2021-07-28T15:32:41,024 Entered build tracker: /tmp/pip-req-tracker-kw_xh1rq 2021-07-28T15:32:41,025 Created temporary directory: /tmp/pip-wheel-ti14dyte 2021-07-28T15:32:41,055 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-28T15:32:41,056 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-28T15:32:41,056 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-28T15:32:41,056 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-28T15:32:41,056 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-28T15:32:41,059 WARNING: Location '/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:32:41,059 WARNING: Location 't/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:32:41,060 WARNING: Location 'm/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:32:41,060 WARNING: Location 'p/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:32:41,060 1 location(s) to search for versions of jcvi: 2021-07-28T15:32:41,060 * https://pypi.org/simple/jcvi/ 2021-07-28T15:32:41,061 Fetching project page and analyzing links: https://pypi.org/simple/jcvi/ 2021-07-28T15:32:41,061 Getting page https://pypi.org/simple/jcvi/ 2021-07-28T15:32:41,063 Found index url https://pypi.org/simple 2021-07-28T15:32:41,438 Found link https://files.pythonhosted.org/packages/9a/4f/c53e7eb012d5a42fca39fa8669a7d58f14673abbbe328b8c7e775cbf92cb/jcvi-0.4.7.tar.gz#sha256=9181ce8cf9768c1829f72c542aa801ba7d21f218e50c0776da5e1d110479d96d (from https://pypi.org/simple/jcvi/), version: 0.4.7 2021-07-28T15:32:41,439 Found link https://files.pythonhosted.org/packages/4a/9d/a6b537b0be8725d94c92546c4ba8de4d6fb97df654d7c12b6fe000049491/jcvi-0.4.8.tar.gz#sha256=8465dc624ecbb82c89ee6872ce6779634b877443ffe836124ef307cf76c6378a (from https://pypi.org/simple/jcvi/), version: 0.4.8 2021-07-28T15:32:41,439 Found link https://files.pythonhosted.org/packages/ac/53/ef3eaa2c0473a0553c6b5f2446885b3af401e53174e33d682d82e15d3795/jcvi-0.4.9.tar.gz#sha256=10a4d30f2148aa580e8e672a5aaba10e153a578b35e951ec69f2b4b679d90420 (from https://pypi.org/simple/jcvi/), version: 0.4.9 2021-07-28T15:32:41,439 Found link https://files.pythonhosted.org/packages/73/2f/d2b36ea11caca5b0edce0786aa6cc09b3b42beacebb8adee3f6db905093d/jcvi-0.4.10.tar.gz#sha256=654d0f3a2c099f9d81a4dc64af62a7d0f2e63b642b9af526bd1ef74687853418 (from https://pypi.org/simple/jcvi/), version: 0.4.10 2021-07-28T15:32:41,440 Found link https://files.pythonhosted.org/packages/0d/79/f86d87cb9f3a987a497a022422ec858d2788988f42067f773f3ca078c089/jcvi-0.4.12.tar.gz#sha256=93425f1fae03c8df20d71b3d5ceb3e8a24d979d5204b77823da54f50aeca05c4 (from https://pypi.org/simple/jcvi/), version: 0.4.12 2021-07-28T15:32:41,440 Found link https://files.pythonhosted.org/packages/95/68/96c4e56778504252a4a498c1b2f50561b73938812dd4e280a931bb3d1ecc/jcvi-0.5.1.tar.gz#sha256=2adb070783a773889a88e55724d823b0856ab490523f0a12b6d3a235fd6bac4c (from https://pypi.org/simple/jcvi/), version: 0.5.1 2021-07-28T15:32:41,440 Found link https://files.pythonhosted.org/packages/2e/58/a0e6ee654d1fbed322ab5756fe964a8a52f52850520eec0baffe6d120afc/jcvi-0.5.2.tar.gz#sha256=51a90442bb5ee9dc4a15b84816489477e593ff4c65925ab5d08ed1b8d672b984 (from https://pypi.org/simple/jcvi/), version: 0.5.2 2021-07-28T15:32:41,441 Found link https://files.pythonhosted.org/packages/21/d6/2f7d7a1ed2df03a36839a7556a663bfdc96755dc60907faa67ad03af0730/jcvi-0.5.3.tar.gz#sha256=589cc5edc564b3b6019a86422dfcb2cd44c4f59606bcf1ce310b5911d15ba21c (from https://pypi.org/simple/jcvi/), version: 0.5.3 2021-07-28T15:32:41,441 Found link https://files.pythonhosted.org/packages/fb/a1/ae58b6664ceaf79e0aa367e371e5c76e0699c0b9d7baec999e3d3a2e7052/jcvi-0.5.5.tar.gz#sha256=82e55a04126695d7c88d0d2516fcff9c8e69272bb733ce05ff0c55173253bc20 (from https://pypi.org/simple/jcvi/), version: 0.5.5 2021-07-28T15:32:41,441 Found link https://files.pythonhosted.org/packages/f6/8a/d35b5b34516256b5e937318b5ef5582ca6e03d131826454c44289a84b7a0/jcvi-0.5.6.tar.gz#sha256=a65c2f058931ed09b9218c116840b3d20b59bc0708295f1cd596265885aa760f (from https://pypi.org/simple/jcvi/), version: 0.5.6 2021-07-28T15:32:41,442 Found link https://files.pythonhosted.org/packages/fd/d7/2739abb3779ccef74fd9f41062fa0a357b0434d3c261faa5bef044853292/jcvi-0.5.7.tar.gz#sha256=39e42dacd6bedeb4cb66d11198fc5eb67fef68ec19c0906f6ce9eae5f853b758 (from https://pypi.org/simple/jcvi/), version: 0.5.7 2021-07-28T15:32:41,442 Found link https://files.pythonhosted.org/packages/b5/e7/14df7241963f68cfef3fccd5b907c217f397cd90e83f73f4dfceedd9a4d2/jcvi-0.5.8.tar.gz#sha256=fbab5cb7b19f1c069386adb29c5e93e2422107b8fbf527fcb885f65d7559a6af (from https://pypi.org/simple/jcvi/), version: 0.5.8 2021-07-28T15:32:41,442 Found link https://files.pythonhosted.org/packages/6f/6b/65638dc603fa922672380f32d5d7e8b263cc4d0a5f2a166701b50e3a1d88/jcvi-0.5.9.tar.gz#sha256=0dd9d09881170008d4c7adaf0f8bbe2c762e353cfddc060786e5ac4b3328d9f4 (from https://pypi.org/simple/jcvi/), version: 0.5.9 2021-07-28T15:32:41,443 Found link https://files.pythonhosted.org/packages/4d/b2/77a3e0bba015cd3d3edb3bd4e7065b0090c0cf77560c24681464ab73042e/jcvi-0.6.1.tar.gz#sha256=4fb330c23d5c78c375ab7233c62c6392db439b97a9e1745912f547c8310660a9 (from https://pypi.org/simple/jcvi/), version: 0.6.1 2021-07-28T15:32:41,443 Found link https://files.pythonhosted.org/packages/3a/c3/b488edc6a7ef108636c86fd3673bcfa53a1dc5f4ad45c5c5652a29f32226/jcvi-0.6.2.tar.gz#sha256=12818ddaf7ebe1c583a3e2440b7569709370f043c54c544768affc4504a63dcd (from https://pypi.org/simple/jcvi/), version: 0.6.2 2021-07-28T15:32:41,443 Found link https://files.pythonhosted.org/packages/b1/d4/2d2d6f252243402231b000eb4d4850ed6303064f5586b00d69364c6ee60d/jcvi-0.6.6.tar.gz#sha256=720e6ffa0c846dfc3bae2560c24a8e39ed0709b0ab121c0b331cea99ae0e6d25 (from https://pypi.org/simple/jcvi/), version: 0.6.6 2021-07-28T15:32:41,443 Found link https://files.pythonhosted.org/packages/1f/0a/4d1328c1cb4244d445aad2d7009f25d1490bc6d557cc4863a4ac5c42bc62/jcvi-0.6.9.tar.gz#sha256=e8f953a834ece1a017ffb5a085c710c81ba6b3bcbc91aa794aa383abf903b5ce (from https://pypi.org/simple/jcvi/), version: 0.6.9 2021-07-28T15:32:41,444 Found link https://files.pythonhosted.org/packages/27/88/6b2048b283c8ee70456e5bc7be04251020fd9b3929df13b6850d16e78e45/jcvi-0.7.1.tar.gz#sha256=bf5bb92160bb1942b615013315404daf263da2f629b3bc141a7cb7f1dc211d3a (from https://pypi.org/simple/jcvi/), version: 0.7.1 2021-07-28T15:32:41,444 Found link https://files.pythonhosted.org/packages/c1/57/226e744b4ad8c43086b050a710cc13012fc07a881847d7cfc98f10c2a35c/jcvi-0.7.3.tar.gz#sha256=58490d9ebb986ca04e4c4bcebde55edafbf267163c15f87eb250b6b34f3866dd (from https://pypi.org/simple/jcvi/), version: 0.7.3 2021-07-28T15:32:41,444 Found link https://files.pythonhosted.org/packages/c4/f9/1bc024ccde1dec0e052c3c66496533aa2e12b271be82c605fa0ee50c1611/jcvi-0.7.4.tar.gz#sha256=4dfbc5bd46bbeef4a6b0da2198b522f8350aeb5fd2a368d16f7f8ba1226347b8 (from https://pypi.org/simple/jcvi/), version: 0.7.4 2021-07-28T15:32:41,444 Found link https://files.pythonhosted.org/packages/e9/dd/64edf8d5ff645b2b186030df11516cd90daef149b5a3b8658fbe52d3c804/jcvi-0.7.5.tar.gz#sha256=469186839a55f6ccb0930a812fb4166833d4977f80faf646934d8042321674b2 (from https://pypi.org/simple/jcvi/), version: 0.7.5 2021-07-28T15:32:41,445 Found link https://files.pythonhosted.org/packages/e2/4b/d87a95002dd277ffe9f221afc4163714e6fc81a1d6edbcf387603c579830/jcvi-0.7.6.tar.gz#sha256=7367ca817d33976a029c1eb30732ffd10077ce25789e3f666bd37bb855955090 (from https://pypi.org/simple/jcvi/), version: 0.7.6 2021-07-28T15:32:41,445 Found link https://files.pythonhosted.org/packages/e1/e7/60e9e2c221731f6c0305784ac952c431625bf7be41a39464a568f4e3b18c/jcvi-0.7.7.tar.gz#sha256=561b9800f17542b29867e71488ddbd5a8dec72e5d0024a742e5917bc36798e5f (from https://pypi.org/simple/jcvi/), version: 0.7.7 2021-07-28T15:32:41,445 Found link https://files.pythonhosted.org/packages/2f/4c/745403735f07d6f4f83d0779cbfe1b565a366c5caba854bff17970b7b524/jcvi-0.8.4.tar.gz#sha256=d326ef550fa56b45190b3f5de7c2917af9d64ace8d22592cd65ceafad10b5280 (from https://pypi.org/simple/jcvi/), version: 0.8.4 2021-07-28T15:32:41,446 Found link https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d (from https://pypi.org/simple/jcvi/), version: 0.8.12 2021-07-28T15:32:41,446 Found link https://files.pythonhosted.org/packages/80/0a/b8a9719ae0a6e42a8c3ff5156dd924001278516d2b78d243a1cfa6311c94/jcvi-0.9.6.tar.gz#sha256=eaaf422c97376c0f35b2c98c3413bbef03e925d4bf0becf492a2b4028912891e (from https://pypi.org/simple/jcvi/), version: 0.9.6 2021-07-28T15:32:41,446 Found link https://files.pythonhosted.org/packages/48/9b/0c05b8fc3e088eecea6450170681d486e8a3cde9f45a39ce62d636ae219f/jcvi-0.9.9.tar.gz#sha256=2100581bc91c94599471a22fc9401ea4b24d08186b90120ab022eda3c75ced0e (from https://pypi.org/simple/jcvi/), version: 0.9.9 2021-07-28T15:32:41,446 Found link https://files.pythonhosted.org/packages/d7/cb/84dfb1c26e0df77f01bad924c8dccc9f311951f13fa73e897b86293406e4/jcvi-0.9.10.tar.gz#sha256=1a28a16f14ed2f6e4df1a0720aa3a0aa5d7b7d855cb2ce55a65da4afb49ce721 (from https://pypi.org/simple/jcvi/), version: 0.9.10 2021-07-28T15:32:41,447 Found link https://files.pythonhosted.org/packages/f2/86/0f8df6719496e325af9c5373081b3f88e854ffdb128a1f412124011fbe23/jcvi-0.9.11.tar.gz#sha256=e7719014ebbd82107806adda6c784d73cd6ba5036289ccb2058800ad22bbad7a (from https://pypi.org/simple/jcvi/), version: 0.9.11 2021-07-28T15:32:41,447 Found link https://files.pythonhosted.org/packages/b4/fb/9aac88999c9eb01575ec8e0924df82b247b4df1e626bbc853caccff3e83e/jcvi-0.9.12.tar.gz#sha256=4ac2a5adc03c95826cf2f6359f181c7cccb8cdb6a3f02f6718b045d439a0254e (from https://pypi.org/simple/jcvi/), version: 0.9.12 2021-07-28T15:32:41,447 Found link https://files.pythonhosted.org/packages/f4/ec/5b12cd16bd7ece78e740974aa190b554e61c9ec817ecfbaf090efb715a31/jcvi-0.9.13.tar.gz#sha256=f333a091fae5d9e40c0ed7eb31064537f5e87fe4ef6c231977552938f61e7248 (from https://pypi.org/simple/jcvi/), version: 0.9.13 2021-07-28T15:32:41,447 Found link https://files.pythonhosted.org/packages/9b/4c/c454c7e965d28b1ef90b186be5502aee2460ecd242513ef7ca28ce4691e5/jcvi-0.9.14.tar.gz#sha256=90b7300ba979d41b443c0c6af6768a7bddee0ae2abd5a87a8bc90f044d75a9de (from https://pypi.org/simple/jcvi/), version: 0.9.14 2021-07-28T15:32:41,448 Found link https://files.pythonhosted.org/packages/b1/2a/6630b839be29f1d0ce2f6059ee0889eb8e65bee5c80216901f0edf3a7dd6/jcvi-1.0.1.tar.gz#sha256=2ea7b692b55485c53aba9dee58f0e218df841ea7b55454680c053ad8fee6e647 (from https://pypi.org/simple/jcvi/), version: 1.0.1 2021-07-28T15:32:41,448 Found link https://files.pythonhosted.org/packages/92/5c/f48edd25912dd836f721aba88e069567070583bea4c5e8f101d4a8d39c63/jcvi-1.0.2.tar.gz#sha256=76cb492f65c0d3766923ddbcbc0f074d32ac603428f5b34fc910fff4983ebfc9 (from https://pypi.org/simple/jcvi/), version: 1.0.2 2021-07-28T15:32:41,448 Found link https://files.pythonhosted.org/packages/bc/96/9cee88ea244fef540ca144a19c99e859102641861df833a075e3e5824aaf/jcvi-1.0.3.tar.gz#sha256=6115882020338d53058b2d35ccbc451f737cbe0205320742fc63c8c41b46d7df (from https://pypi.org/simple/jcvi/), version: 1.0.3 2021-07-28T15:32:41,448 Found link https://files.pythonhosted.org/packages/00/9a/f43fe374eb9e88c92c468fe7d834dc1a5cf7583f3c0d72646a237ea3bf74/jcvi-1.0.4.tar.gz#sha256=3d9298e43f78451f10bf731f88047da47fe8b23ba9c767b5f5158809d79295c8 (from https://pypi.org/simple/jcvi/), version: 1.0.4 2021-07-28T15:32:41,449 Found link https://files.pythonhosted.org/packages/57/a2/c4366a77f1ffacfe04a0b338c18a675d878728e89d4ef2b26ae5c15f00d3/jcvi-1.0.5.tar.gz#sha256=5dd0515541548cee07a0cbb26bec70cdea8d502fc365971c420f3b919ef3074b (from https://pypi.org/simple/jcvi/), version: 1.0.5 2021-07-28T15:32:41,449 Found link https://files.pythonhosted.org/packages/95/99/7dbf1fe691d207f09fb898775ee72afb5174253d09bf9a37978860d00b5a/jcvi-1.0.6.tar.gz#sha256=49565d9dfe7519ee58a365a2507162f1483943370a89dfdc357650bbc3540c25 (from https://pypi.org/simple/jcvi/), version: 1.0.6 2021-07-28T15:32:41,449 Found link https://files.pythonhosted.org/packages/b9/81/99c5b7456aa490483fe208753894196113656e9cc69af47b39d42bf218c9/jcvi-1.0.7.tar.gz#sha256=6387cb5ae5e8e566117cdc043f87894a0108066b7ce2ce640a885537943eb153 (from https://pypi.org/simple/jcvi/), version: 1.0.7 2021-07-28T15:32:41,450 Found link https://files.pythonhosted.org/packages/79/d2/d570003c0045ea92485ea9c5e8f0561d47bbf18ea8951fe31450ca8961ff/jcvi-1.0.8.tar.gz#sha256=64cf47d3bbcc54dabfa8e20bdae7693dba8de8bd67e6c9c70d3ff16f24cf279e (from https://pypi.org/simple/jcvi/), version: 1.0.8 2021-07-28T15:32:41,450 Found link https://files.pythonhosted.org/packages/97/6f/fb49e1603d4617f0a136f86a94e035be5cf1fe34b9ff59ddfc7e5fc5d04d/jcvi-1.0.9.tar.gz#sha256=b03f2385639b601f111c812872763fee6699aa8f2683431347520f5bf9155480 (from https://pypi.org/simple/jcvi/), version: 1.0.9 2021-07-28T15:32:41,450 Found link https://files.pythonhosted.org/packages/9d/ec/6c6329502b18bcaf244d19a66aab8df287ac99c7cbaa0c047a6c18844de8/jcvi-1.0.10.tar.gz#sha256=56881652b39662a54d32c2f6387e9c58e40a925ac326c9bf1b4ba929b5a86562 (from https://pypi.org/simple/jcvi/), version: 1.0.10 2021-07-28T15:32:41,450 Found link https://files.pythonhosted.org/packages/a4/a0/a9827217e298eefcf6a9e94e26f33512204f50954c6209b8eed418cbe9d7/jcvi-1.0.11.tar.gz#sha256=ced5c0f3c6b0356292aa24736cf9c7848da71dd27c8c9e1e8d7acb77bc620ae3 (from https://pypi.org/simple/jcvi/), version: 1.0.11 2021-07-28T15:32:41,451 Found link https://files.pythonhosted.org/packages/04/42/7b9185888061799c56365598139239d4a48d074dfd2d0ff46c85cc032542/jcvi-1.0.12.tar.gz#sha256=3e55598c6be75b991a76904efe002c9c10a970244f46b2443fe333f934d265fd (from https://pypi.org/simple/jcvi/), version: 1.0.12 2021-07-28T15:32:41,451 Found link https://files.pythonhosted.org/packages/2c/e3/587dd5ddba13f6eff78a78b85d0dc7d008b15e5e28d04fc4081cff9f2ca6/jcvi-1.0.13.tar.gz#sha256=659ada559937f5914113a7a60bdc41bd58ddeadf7c1db974e11271b526e8c963 (from https://pypi.org/simple/jcvi/), version: 1.0.13 2021-07-28T15:32:41,451 Found link https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14 2021-07-28T15:32:41,452 Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1 2021-07-28T15:32:41,452 Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2 2021-07-28T15:32:41,452 Found link https://files.pythonhosted.org/packages/f3/4d/90ec025ffba6064f62d2480deebee2096b1c581484f5deb807081f68b826/jcvi-1.1.3.tar.gz#sha256=bff23cbdfa634dd22beff778e7405d509414d3a98b7531397b03db3e0f7037e5 (from https://pypi.org/simple/jcvi/), version: 1.1.3 2021-07-28T15:32:41,452 Found link https://files.pythonhosted.org/packages/aa/77/af2e6dbb516a39b09f908e85b2e1f52c8003bcf822f59434b1241da7d057/jcvi-1.1.4.tar.gz#sha256=de96b414804a5a9884845cc5923e6772339ea86b3aae40d02841e59944ce1777 (from https://pypi.org/simple/jcvi/), version: 1.1.4 2021-07-28T15:32:41,453 Found link https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b (from https://pypi.org/simple/jcvi/), version: 1.1.5 2021-07-28T15:32:41,453 Found link https://files.pythonhosted.org/packages/31/b4/f7d533c9099a7be91b964685e2d86f1986e25c45c6ec7174528f95d4c732/jcvi-1.1.6.tar.gz#sha256=c3a54f22140e4e3962f3cb05a5d9c47952d48b67d0459bf499193828018255a3 (from https://pypi.org/simple/jcvi/), version: 1.1.6 2021-07-28T15:32:41,453 Found link https://files.pythonhosted.org/packages/01/be/3ae008ee2b3a53b46f8953bbaf1c5372b5faaf790ee7c5813201d50fbdaf/jcvi-1.1.7.tar.gz#sha256=2709f0e2420da0f9d5a5da581f8f19bd54d7bb9a9720f0d0e9141f30e84b5ab2 (from https://pypi.org/simple/jcvi/), version: 1.1.7 2021-07-28T15:32:41,453 Found link https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 (from https://pypi.org/simple/jcvi/), version: 1.1.8 2021-07-28T15:32:41,454 Found link https://files.pythonhosted.org/packages/f8/da/21a544f6e7177504462669d1d882703c9d189aa18acfe4fb7ae28f541b12/jcvi-1.1.9.tar.gz#sha256=9711e6c5dec2436a4f712385ee165051e6c60c07f2ab0e2984e1139874879c77 (from https://pypi.org/simple/jcvi/), version: 1.1.9 2021-07-28T15:32:41,454 Found link https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a (from https://pypi.org/simple/jcvi/), version: 1.1.10 2021-07-28T15:32:41,454 Found link https://files.pythonhosted.org/packages/5b/36/1ed66483a5d733d87bd77466e425ef557fa4e1aa8c779b0acf02a810f822/jcvi-1.1.11.tar.gz#sha256=871ea81abb709470fc2f86038372915211dfb211901a9faed0b84714783780e7 (from https://pypi.org/simple/jcvi/), version: 1.1.11 2021-07-28T15:32:41,454 Found link https://files.pythonhosted.org/packages/7e/5c/76e236becc18806e305a68068ab84eab0eeeb862fbcea38674a7775c72c5/jcvi-1.1.12.tar.gz#sha256=9c688816d2770300a137fe0cdb7c4cdbc0f94e9f96d849cf0c1465af4464f8fe (from https://pypi.org/simple/jcvi/), version: 1.1.12 2021-07-28T15:32:41,455 Found link https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d (from https://pypi.org/simple/jcvi/), version: 1.1.13 2021-07-28T15:32:41,455 Found link https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0 (from https://pypi.org/simple/jcvi/), version: 1.1.14 2021-07-28T15:32:41,455 Found link https://files.pythonhosted.org/packages/89/97/1497942bf5ec52ada7cee1ad1961eecbe87361494812c57c9fb7cf659834/jcvi-1.1.15.tar.gz#sha256=d22c72cd566f41ca8e9e47e30ca430ec03fe06cc62dd22a652e8e0257c3a3e90 (from https://pypi.org/simple/jcvi/), version: 1.1.15 2021-07-28T15:32:41,456 Found link https://files.pythonhosted.org/packages/c6/49/63254eb560d3df5dece01e116fa6533f04b18dd76f0b51d8b778c7143864/jcvi-1.1.16.tar.gz#sha256=3e05eccc3d98c496adecb53eae0bdef7da82c1f733b2b0b859123e99e5778170 (from https://pypi.org/simple/jcvi/), version: 1.1.16 2021-07-28T15:32:41,456 Found link https://files.pythonhosted.org/packages/95/94/db0f2759b6f1e6f6e4f7e66f8168b95c846a4ba233a6b71a1bc5352f4014/jcvi-1.1.17.tar.gz#sha256=e8bccf025ce08acdb89bb9f9b3017e38c6ed65f55785edd298338af8adfe3769 (from https://pypi.org/simple/jcvi/), version: 1.1.17 2021-07-28T15:32:41,456 Skipping link: not a file: https://pypi.org/simple/jcvi/ 2021-07-28T15:32:41,483 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2021-07-28T15:32:41,501 Collecting jcvi==1.0.14 2021-07-28T15:32:41,502 Created temporary directory: /tmp/pip-unpack-ns9hvspr 2021-07-28T15:32:42,167 Downloading jcvi-1.0.14.tar.gz (849 kB) 2021-07-28T15:32:42,965 Added jcvi==1.0.14 from https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 to build tracker '/tmp/pip-req-tracker-kw_xh1rq' 2021-07-28T15:32:42,967 Running setup.py (path:/tmp/pip-wheel-ti14dyte/jcvi_92670ce5889645a3a80a4cee20894c0e/setup.py) egg_info for package jcvi 2021-07-28T15:32:42,967 Created temporary directory: /tmp/pip-pip-egg-info-tm67r4gr 2021-07-28T15:32:42,968 Running command python setup.py egg_info 2021-07-28T15:32:44,400 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.0.14' to '1.0.14' 2021-07-28T15:32:44,401 warnings.warn(tmpl.format(**locals())) 2021-07-28T15:32:44,442 running egg_info 2021-07-28T15:32:44,445 creating /tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info 2021-07-28T15:32:44,445 writing /tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/PKG-INFO 2021-07-28T15:32:44,449 writing dependency_links to /tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/dependency_links.txt 2021-07-28T15:32:44,451 writing requirements to /tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/requires.txt 2021-07-28T15:32:44,452 writing top-level names to /tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/top_level.txt 2021-07-28T15:32:44,453 writing manifest file '/tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/SOURCES.txt' 2021-07-28T15:32:44,478 reading manifest file '/tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/SOURCES.txt' 2021-07-28T15:32:44,479 reading manifest template 'MANIFEST.in' 2021-07-28T15:32:44,483 adding license file 'LICENSE' 2021-07-28T15:32:44,493 writing manifest file '/tmp/pip-pip-egg-info-tm67r4gr/jcvi.egg-info/SOURCES.txt' 2021-07-28T15:32:44,595 Source in /tmp/pip-wheel-ti14dyte/jcvi_92670ce5889645a3a80a4cee20894c0e has version 1.0.14, which satisfies requirement jcvi==1.0.14 from https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 2021-07-28T15:32:44,596 Removed jcvi==1.0.14 from https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 from build tracker '/tmp/pip-req-tracker-kw_xh1rq' 2021-07-28T15:32:44,601 Created temporary directory: /tmp/pip-unpack-8pg4pfts 2021-07-28T15:32:44,601 Building wheels for collected packages: jcvi 2021-07-28T15:32:44,605 Created temporary directory: /tmp/pip-wheel-5ofcdcxz 2021-07-28T15:32:44,606 Building wheel for jcvi (setup.py): started 2021-07-28T15:32:44,606 Destination directory: /tmp/pip-wheel-5ofcdcxz 2021-07-28T15:32:44,606 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ti14dyte/jcvi_92670ce5889645a3a80a4cee20894c0e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ti14dyte/jcvi_92670ce5889645a3a80a4cee20894c0e/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-5ofcdcxz 2021-07-28T15:32:45,964 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.0.14' to '1.0.14' 2021-07-28T15:32:45,965 warnings.warn(tmpl.format(**locals())) 2021-07-28T15:32:46,025 running bdist_wheel 2021-07-28T15:32:46,030 running build 2021-07-28T15:32:46,031 running build_py 2021-07-28T15:32:46,037 creating build 2021-07-28T15:32:46,038 creating build/lib.linux-armv7l-3.9 2021-07-28T15:32:46,039 creating build/lib.linux-armv7l-3.9/jcvi 2021-07-28T15:32:46,040 copying jcvi/__init__.py -> build/lib.linux-armv7l-3.9/jcvi 2021-07-28T15:32:46,042 copying jcvi/_version.py -> build/lib.linux-armv7l-3.9/jcvi 2021-07-28T15:32:46,045 creating build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,046 copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,049 copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,052 copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,054 copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,056 copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,060 copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,063 copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,066 copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,068 copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,070 copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,072 copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,074 copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms 2021-07-28T15:32:46,079 creating build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,079 copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,084 copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,086 copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,089 copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,091 copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,094 copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,097 copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,098 copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,101 copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,103 copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,105 copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,107 copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,109 copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,112 copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,115 copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,117 copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,120 copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,122 copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,125 copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,127 copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,129 copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,132 copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,134 copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.9/jcvi/graphics 2021-07-28T15:32:46,138 creating build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,139 copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,142 copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,145 copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,147 copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,149 copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,151 copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,153 copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,156 copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,160 copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,162 copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,164 copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,166 copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,168 copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,172 copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,174 copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,176 copying jcvi/formats/btab.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,179 copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,182 copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,184 copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,186 copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,190 copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,192 copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,195 copying jcvi/formats/ace.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,197 copying jcvi/formats/fpc.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,199 copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,202 copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,205 copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,208 copying jcvi/formats/posmap.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,211 copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,216 copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,227 creating build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,228 copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,231 copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,234 copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,237 copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,239 copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,242 copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,246 copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,248 copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,251 copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,254 copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,256 copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/compara 2021-07-28T15:32:46,262 creating build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,263 copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,266 copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,269 copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,272 copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,275 copying jcvi/assembly/sspace.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,278 copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,280 copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,282 copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,285 copying jcvi/assembly/pbjelly.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,287 copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,290 copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,293 copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,296 copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,299 copying jcvi/assembly/amos.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,302 copying jcvi/assembly/bambus.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,304 copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,308 copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,311 copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,313 copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,318 copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,321 copying jcvi/assembly/unitig.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,324 copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,328 copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,330 copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,335 copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,337 copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,340 copying jcvi/assembly/meraculous.py -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,343 creating build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,344 copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,346 copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,347 copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,350 copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,353 copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,355 copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,357 copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,360 copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,363 copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,365 copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.9/jcvi/variation 2021-07-28T15:32:46,369 creating build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,369 copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,374 copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,376 copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,378 copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,381 copying jcvi/apps/tesseract.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,383 copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,386 copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,389 copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,391 copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,393 copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,395 copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,397 copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,398 copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,400 copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,402 copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,404 copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,406 copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,409 copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,412 copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,414 copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,416 copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,418 copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,420 copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,423 copying jcvi/apps/console.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,425 copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,427 copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,429 copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,431 copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.9/jcvi/apps 2021-07-28T15:32:46,435 creating build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,436 copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,438 copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,440 copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,442 copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,444 copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,446 copying jcvi/utils/brewer2mpl.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,448 copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,450 copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,453 copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,456 copying jcvi/utils/iter.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,458 copying jcvi/utils/natsort.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,461 copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,463 copying jcvi/utils/progressbar.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,466 copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,469 copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,472 copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,474 copying jcvi/utils/counter.py -> build/lib.linux-armv7l-3.9/jcvi/utils 2021-07-28T15:32:46,478 creating build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,479 copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,481 copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,483 copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,484 copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,487 copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,490 copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,492 copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,495 copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,497 copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,499 copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,502 copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,505 copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.9/jcvi/annotation 2021-07-28T15:32:46,508 creating build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,509 copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,512 copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,515 copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,516 copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,519 copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,521 copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,523 copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,525 copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,527 copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,529 copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,532 copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,534 copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,536 copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,538 copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,541 copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,547 copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,549 copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.9/jcvi/projects 2021-07-28T15:32:46,552 creating build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,553 copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,554 running egg_info 2021-07-28T15:32:46,564 writing jcvi.egg-info/PKG-INFO 2021-07-28T15:32:46,566 writing dependency_links to jcvi.egg-info/dependency_links.txt 2021-07-28T15:32:46,568 writing requirements to jcvi.egg-info/requires.txt 2021-07-28T15:32:46,569 writing top-level names to jcvi.egg-info/top_level.txt 2021-07-28T15:32:46,590 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2021-07-28T15:32:46,596 reading manifest template 'MANIFEST.in' 2021-07-28T15:32:46,600 adding license file 'LICENSE' 2021-07-28T15:32:46,611 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2021-07-28T15:32:46,618 copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:46,620 copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:46,623 copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,625 copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,630 copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,633 copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,636 copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,639 copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,642 copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,644 copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,647 copying jcvi/utils/data/colorbrewer_all_schemes.json -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,653 copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,655 copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,660 copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,662 copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.9/jcvi/utils/data 2021-07-28T15:32:46,680 UPDATING build/lib.linux-armv7l-3.9/jcvi/_version.py 2021-07-28T15:32:46,681 set build/lib.linux-armv7l-3.9/jcvi/_version.py to 'v1.0.14' 2021-07-28T15:32:46,682 running build_ext 2021-07-28T15:32:46,771 cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c 2021-07-28T15:32:47,385 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ti14dyte/jcvi_92670ce5889645a3a80a4cee20894c0e/jcvi/assembly/chic.pyx 2021-07-28T15:32:47,385 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-28T15:32:50,249 cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c 2021-07-28T15:32:51,224 building 'jcvi.assembly.chic' extension 2021-07-28T15:32:51,224 creating build/temp.linux-armv7l-3.9 2021-07-28T15:32:51,224 creating build/temp.linux-armv7l-3.9/jcvi 2021-07-28T15:32:51,225 creating build/temp.linux-armv7l-3.9/jcvi/assembly 2021-07-28T15:32:51,226 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.9/jcvi/assembly/chic.o -O3 2021-07-28T15:32:51,634 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T15:32:51,634 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T15:32:51,635 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T15:32:51,635 from jcvi/assembly/chic.c:620: 2021-07-28T15:32:51,635 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T15:32:51,635 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T15:32:51,635 | ^~~~~~~ 2021-07-28T15:32:55,366 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so 2021-07-28T15:32:55,495 building 'jcvi.formats.cblast' extension 2021-07-28T15:32:55,496 creating build/temp.linux-armv7l-3.9/jcvi/formats 2021-07-28T15:32:55,496 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.9/jcvi/formats/cblast.o -O3 2021-07-28T15:33:04,997 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so 2021-07-28T15:33:05,155 installing to build/bdist.linux-armv7l/wheel 2021-07-28T15:33:05,155 running install 2021-07-28T15:33:05,157 running install_lib 2021-07-28T15:33:05,161 creating build/bdist.linux-armv7l 2021-07-28T15:33:05,162 creating build/bdist.linux-armv7l/wheel 2021-07-28T15:33:05,164 creating build/bdist.linux-armv7l/wheel/jcvi 2021-07-28T15:33:05,166 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,167 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,171 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,173 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,175 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,176 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,179 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,182 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,184 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,187 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,189 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,191 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,193 copying build/lib.linux-armv7l-3.9/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-07-28T15:33:05,196 copying build/lib.linux-armv7l-3.9/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-07-28T15:33:05,199 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,200 copying build/lib.linux-armv7l-3.9/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,204 copying build/lib.linux-armv7l-3.9/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,207 copying build/lib.linux-armv7l-3.9/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,210 copying build/lib.linux-armv7l-3.9/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,212 copying build/lib.linux-armv7l-3.9/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,214 copying build/lib.linux-armv7l-3.9/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,217 copying build/lib.linux-armv7l-3.9/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,219 copying build/lib.linux-armv7l-3.9/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,222 copying build/lib.linux-armv7l-3.9/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,225 copying build/lib.linux-armv7l-3.9/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,227 copying build/lib.linux-armv7l-3.9/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,230 copying build/lib.linux-armv7l-3.9/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,233 copying build/lib.linux-armv7l-3.9/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,237 copying build/lib.linux-armv7l-3.9/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,241 copying build/lib.linux-armv7l-3.9/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,244 copying build/lib.linux-armv7l-3.9/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,247 copying build/lib.linux-armv7l-3.9/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,250 copying build/lib.linux-armv7l-3.9/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,253 copying build/lib.linux-armv7l-3.9/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,255 copying build/lib.linux-armv7l-3.9/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,258 copying build/lib.linux-armv7l-3.9/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,260 copying build/lib.linux-armv7l-3.9/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,263 copying build/lib.linux-armv7l-3.9/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-07-28T15:33:05,266 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,267 copying build/lib.linux-armv7l-3.9/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,271 copying build/lib.linux-armv7l-3.9/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,273 copying build/lib.linux-armv7l-3.9/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,276 copying build/lib.linux-armv7l-3.9/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,278 copying build/lib.linux-armv7l-3.9/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,280 copying build/lib.linux-armv7l-3.9/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,282 copying build/lib.linux-armv7l-3.9/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,284 copying build/lib.linux-armv7l-3.9/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,289 copying build/lib.linux-armv7l-3.9/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,291 copying build/lib.linux-armv7l-3.9/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,293 copying build/lib.linux-armv7l-3.9/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,296 copying build/lib.linux-armv7l-3.9/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,297 copying build/lib.linux-armv7l-3.9/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,301 copying build/lib.linux-armv7l-3.9/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,303 copying build/lib.linux-armv7l-3.9/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,306 copying build/lib.linux-armv7l-3.9/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,309 copying build/lib.linux-armv7l-3.9/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,311 copying build/lib.linux-armv7l-3.9/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,314 copying build/lib.linux-armv7l-3.9/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,316 copying build/lib.linux-armv7l-3.9/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,321 copying build/lib.linux-armv7l-3.9/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,323 copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,343 copying build/lib.linux-armv7l-3.9/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,346 copying build/lib.linux-armv7l-3.9/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,348 copying build/lib.linux-armv7l-3.9/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,350 copying build/lib.linux-armv7l-3.9/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,353 copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,356 copying build/lib.linux-armv7l-3.9/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,358 copying build/lib.linux-armv7l-3.9/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,362 copying build/lib.linux-armv7l-3.9/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,365 copying build/lib.linux-armv7l-3.9/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,369 copying build/lib.linux-armv7l-3.9/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-07-28T15:33:05,375 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,376 copying build/lib.linux-armv7l-3.9/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,379 copying build/lib.linux-armv7l-3.9/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,381 copying build/lib.linux-armv7l-3.9/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,384 copying build/lib.linux-armv7l-3.9/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,386 copying build/lib.linux-armv7l-3.9/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,388 copying build/lib.linux-armv7l-3.9/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,392 copying build/lib.linux-armv7l-3.9/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,394 copying build/lib.linux-armv7l-3.9/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,397 copying build/lib.linux-armv7l-3.9/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,400 copying build/lib.linux-armv7l-3.9/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,402 copying build/lib.linux-armv7l-3.9/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-07-28T15:33:05,408 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,408 copying build/lib.linux-armv7l-3.9/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,411 copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,419 copying build/lib.linux-armv7l-3.9/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,422 copying build/lib.linux-armv7l-3.9/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,424 copying build/lib.linux-armv7l-3.9/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,427 copying build/lib.linux-armv7l-3.9/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,430 copying build/lib.linux-armv7l-3.9/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,432 copying build/lib.linux-armv7l-3.9/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,434 copying build/lib.linux-armv7l-3.9/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,436 copying build/lib.linux-armv7l-3.9/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,439 copying build/lib.linux-armv7l-3.9/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,442 copying build/lib.linux-armv7l-3.9/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,445 copying build/lib.linux-armv7l-3.9/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,448 copying build/lib.linux-armv7l-3.9/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,451 copying build/lib.linux-armv7l-3.9/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,453 copying build/lib.linux-armv7l-3.9/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,456 copying build/lib.linux-armv7l-3.9/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,459 copying build/lib.linux-armv7l-3.9/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,462 copying build/lib.linux-armv7l-3.9/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,465 copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,467 copying build/lib.linux-armv7l-3.9/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,472 copying build/lib.linux-armv7l-3.9/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,476 copying build/lib.linux-armv7l-3.9/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,480 copying build/lib.linux-armv7l-3.9/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,483 copying build/lib.linux-armv7l-3.9/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,486 copying build/lib.linux-armv7l-3.9/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,489 copying build/lib.linux-armv7l-3.9/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,492 copying build/lib.linux-armv7l-3.9/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,495 copying build/lib.linux-armv7l-3.9/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-07-28T15:33:05,498 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,499 copying build/lib.linux-armv7l-3.9/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,502 copying build/lib.linux-armv7l-3.9/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,503 copying build/lib.linux-armv7l-3.9/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,507 copying build/lib.linux-armv7l-3.9/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,509 copying build/lib.linux-armv7l-3.9/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,512 copying build/lib.linux-armv7l-3.9/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,515 copying build/lib.linux-armv7l-3.9/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,518 copying build/lib.linux-armv7l-3.9/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,521 copying build/lib.linux-armv7l-3.9/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,523 copying build/lib.linux-armv7l-3.9/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-07-28T15:33:05,526 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,527 copying build/lib.linux-armv7l-3.9/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,532 copying build/lib.linux-armv7l-3.9/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,535 copying build/lib.linux-armv7l-3.9/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,537 copying build/lib.linux-armv7l-3.9/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,540 copying build/lib.linux-armv7l-3.9/jcvi/apps/tesseract.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,543 copying build/lib.linux-armv7l-3.9/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,546 copying build/lib.linux-armv7l-3.9/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,550 copying build/lib.linux-armv7l-3.9/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,552 copying build/lib.linux-armv7l-3.9/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,554 copying build/lib.linux-armv7l-3.9/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,557 copying build/lib.linux-armv7l-3.9/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,559 copying build/lib.linux-armv7l-3.9/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,561 copying build/lib.linux-armv7l-3.9/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,563 copying build/lib.linux-armv7l-3.9/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,566 copying build/lib.linux-armv7l-3.9/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,569 copying build/lib.linux-armv7l-3.9/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,571 copying build/lib.linux-armv7l-3.9/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,574 copying build/lib.linux-armv7l-3.9/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,577 copying build/lib.linux-armv7l-3.9/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,580 copying build/lib.linux-armv7l-3.9/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,583 copying build/lib.linux-armv7l-3.9/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,585 copying build/lib.linux-armv7l-3.9/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,588 copying build/lib.linux-armv7l-3.9/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,591 copying build/lib.linux-armv7l-3.9/jcvi/apps/console.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,594 copying build/lib.linux-armv7l-3.9/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,596 copying build/lib.linux-armv7l-3.9/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,599 copying build/lib.linux-armv7l-3.9/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,601 copying build/lib.linux-armv7l-3.9/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-07-28T15:33:05,605 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,605 copying build/lib.linux-armv7l-3.9/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,608 copying build/lib.linux-armv7l-3.9/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,610 copying build/lib.linux-armv7l-3.9/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,614 copying build/lib.linux-armv7l-3.9/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,615 copying build/lib.linux-armv7l-3.9/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,618 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,619 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,624 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,627 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,629 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,630 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/colorbrewer_all_schemes.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,636 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,639 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,642 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,645 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,647 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,650 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,654 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,656 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,660 copying build/lib.linux-armv7l-3.9/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-07-28T15:33:05,662 copying build/lib.linux-armv7l-3.9/jcvi/utils/brewer2mpl.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,665 copying build/lib.linux-armv7l-3.9/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,667 copying build/lib.linux-armv7l-3.9/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,671 copying build/lib.linux-armv7l-3.9/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,674 copying build/lib.linux-armv7l-3.9/jcvi/utils/iter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,677 copying build/lib.linux-armv7l-3.9/jcvi/utils/natsort.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,680 copying build/lib.linux-armv7l-3.9/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,682 copying build/lib.linux-armv7l-3.9/jcvi/utils/progressbar.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,685 copying build/lib.linux-armv7l-3.9/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,688 copying build/lib.linux-armv7l-3.9/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,691 copying build/lib.linux-armv7l-3.9/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,694 copying build/lib.linux-armv7l-3.9/jcvi/utils/counter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-07-28T15:33:05,696 copying build/lib.linux-armv7l-3.9/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-07-28T15:33:05,699 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,700 copying build/lib.linux-armv7l-3.9/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,703 copying build/lib.linux-armv7l-3.9/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,705 copying build/lib.linux-armv7l-3.9/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,707 copying build/lib.linux-armv7l-3.9/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,710 copying build/lib.linux-armv7l-3.9/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,714 copying build/lib.linux-armv7l-3.9/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,716 copying build/lib.linux-armv7l-3.9/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,719 copying build/lib.linux-armv7l-3.9/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,722 copying build/lib.linux-armv7l-3.9/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,724 copying build/lib.linux-armv7l-3.9/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,727 copying build/lib.linux-armv7l-3.9/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,730 copying build/lib.linux-armv7l-3.9/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-07-28T15:33:05,734 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,735 copying build/lib.linux-armv7l-3.9/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,738 copying build/lib.linux-armv7l-3.9/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,741 copying build/lib.linux-armv7l-3.9/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,743 copying build/lib.linux-armv7l-3.9/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,746 copying build/lib.linux-armv7l-3.9/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,749 copying build/lib.linux-armv7l-3.9/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,751 copying build/lib.linux-armv7l-3.9/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,753 copying build/lib.linux-armv7l-3.9/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,756 copying build/lib.linux-armv7l-3.9/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,759 copying build/lib.linux-armv7l-3.9/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,762 copying build/lib.linux-armv7l-3.9/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,764 copying build/lib.linux-armv7l-3.9/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,767 copying build/lib.linux-armv7l-3.9/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,769 copying build/lib.linux-armv7l-3.9/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,772 copying build/lib.linux-armv7l-3.9/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,777 copying build/lib.linux-armv7l-3.9/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,779 copying build/lib.linux-armv7l-3.9/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-07-28T15:33:05,781 running install_egg_info 2021-07-28T15:33:05,791 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.0.14-py3.9.egg-info 2021-07-28T15:33:05,807 running install_scripts 2021-07-28T15:33:05,863 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-28T15:33:05,868 creating build/bdist.linux-armv7l/wheel/jcvi-1.0.14.dist-info/WHEEL 2021-07-28T15:33:05,870 creating '/tmp/pip-wheel-5ofcdcxz/jcvi-1.0.14-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-28T15:33:05,873 adding 'jcvi/__init__.py' 2021-07-28T15:33:05,874 adding 'jcvi/_version.py' 2021-07-28T15:33:05,876 adding 'jcvi/algorithms/__init__.py' 2021-07-28T15:33:05,877 adding 'jcvi/algorithms/__main__.py' 2021-07-28T15:33:05,879 adding 'jcvi/algorithms/ec.py' 2021-07-28T15:33:05,880 adding 'jcvi/algorithms/formula.py' 2021-07-28T15:33:05,883 adding 'jcvi/algorithms/graph.py' 2021-07-28T15:33:05,884 adding 'jcvi/algorithms/lis.py' 2021-07-28T15:33:05,888 adding 'jcvi/algorithms/lpsolve.py' 2021-07-28T15:33:05,889 adding 'jcvi/algorithms/matrix.py' 2021-07-28T15:33:05,891 adding 'jcvi/algorithms/maxsum.py' 2021-07-28T15:33:05,892 adding 'jcvi/algorithms/ml.py' 2021-07-28T15:33:05,894 adding 'jcvi/algorithms/supermap.py' 2021-07-28T15:33:05,896 adding 'jcvi/algorithms/tsp.py' 2021-07-28T15:33:05,897 adding 'jcvi/annotation/__init__.py' 2021-07-28T15:33:05,899 adding 'jcvi/annotation/__main__.py' 2021-07-28T15:33:05,902 adding 'jcvi/annotation/ahrd.py' 2021-07-28T15:33:05,904 adding 'jcvi/annotation/automaton.py' 2021-07-28T15:33:05,905 adding 'jcvi/annotation/depth.py' 2021-07-28T15:33:05,907 adding 'jcvi/annotation/evm.py' 2021-07-28T15:33:05,910 adding 'jcvi/annotation/maker.py' 2021-07-28T15:33:05,913 adding 'jcvi/annotation/pasa.py' 2021-07-28T15:33:05,915 adding 'jcvi/annotation/qc.py' 2021-07-28T15:33:05,921 adding 'jcvi/annotation/reformat.py' 2021-07-28T15:33:05,923 adding 'jcvi/annotation/stats.py' 2021-07-28T15:33:05,925 adding 'jcvi/annotation/train.py' 2021-07-28T15:33:05,927 adding 'jcvi/apps/__init__.py' 2021-07-28T15:33:05,928 adding 'jcvi/apps/__main__.py' 2021-07-28T15:33:05,931 adding 'jcvi/apps/align.py' 2021-07-28T15:33:05,940 adding 'jcvi/apps/base.py' 2021-07-28T15:33:05,943 adding 'jcvi/apps/biomart.py' 2021-07-28T15:33:05,944 adding 'jcvi/apps/blastplus.py' 2021-07-28T15:33:05,946 adding 'jcvi/apps/bowtie.py' 2021-07-28T15:33:05,947 adding 'jcvi/apps/bwa.py' 2021-07-28T15:33:05,949 adding 'jcvi/apps/cap3.py' 2021-07-28T15:33:05,951 adding 'jcvi/apps/cdhit.py' 2021-07-28T15:33:05,952 adding 'jcvi/apps/console.py' 2021-07-28T15:33:05,954 adding 'jcvi/apps/emboss.py' 2021-07-28T15:33:05,957 adding 'jcvi/apps/fetch.py' 2021-07-28T15:33:05,960 adding 'jcvi/apps/gbsubmit.py' 2021-07-28T15:33:05,961 adding 'jcvi/apps/gmap.py' 2021-07-28T15:33:05,964 adding 'jcvi/apps/grid.py' 2021-07-28T15:33:05,969 adding 'jcvi/apps/ks.py' 2021-07-28T15:33:05,971 adding 'jcvi/apps/lastz.py' 2021-07-28T15:33:05,972 adding 'jcvi/apps/mask.py' 2021-07-28T15:33:05,977 adding 'jcvi/apps/phylo.py' 2021-07-28T15:33:05,979 adding 'jcvi/apps/r.py' 2021-07-28T15:33:05,980 adding 'jcvi/apps/restriction.py' 2021-07-28T15:33:05,981 adding 'jcvi/apps/script.py' 2021-07-28T15:33:05,983 adding 'jcvi/apps/softlink.py' 2021-07-28T15:33:05,984 adding 'jcvi/apps/tesseract.py' 2021-07-28T15:33:05,989 adding 'jcvi/apps/uclust.py' 2021-07-28T15:33:05,991 adding 'jcvi/apps/uniprot.py' 2021-07-28T15:33:05,992 adding 'jcvi/apps/vecscreen.py' 2021-07-28T15:33:05,994 adding 'jcvi/assembly/__init__.py' 2021-07-28T15:33:05,996 adding 'jcvi/assembly/__main__.py' 2021-07-28T15:33:06,005 adding 'jcvi/assembly/allmaps.py' 2021-07-28T15:33:06,008 adding 'jcvi/assembly/allpaths.py' 2021-07-28T15:33:06,010 adding 'jcvi/assembly/amos.py' 2021-07-28T15:33:06,012 adding 'jcvi/assembly/automaton.py' 2021-07-28T15:33:06,014 adding 'jcvi/assembly/bambus.py' 2021-07-28T15:33:06,015 adding 'jcvi/assembly/base.py' 2021-07-28T15:33:06,020 adding 'jcvi/assembly/ca.py' 2021-07-28T15:33:06,068 adding 'jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so' 2021-07-28T15:33:06,071 adding 'jcvi/assembly/chic.pyx' 2021-07-28T15:33:06,073 adding 'jcvi/assembly/coverage.py' 2021-07-28T15:33:06,075 adding 'jcvi/assembly/gaps.py' 2021-07-28T15:33:06,078 adding 'jcvi/assembly/geneticmap.py' 2021-07-28T15:33:06,082 adding 'jcvi/assembly/goldenpath.py' 2021-07-28T15:33:06,090 adding 'jcvi/assembly/hic.py' 2021-07-28T15:33:06,096 adding 'jcvi/assembly/kmer.py' 2021-07-28T15:33:06,097 adding 'jcvi/assembly/meraculous.py' 2021-07-28T15:33:06,099 adding 'jcvi/assembly/opticalmap.py' 2021-07-28T15:33:06,104 adding 'jcvi/assembly/patch.py' 2021-07-28T15:33:06,105 adding 'jcvi/assembly/pbjelly.py' 2021-07-28T15:33:06,108 adding 'jcvi/assembly/postprocess.py' 2021-07-28T15:33:06,111 adding 'jcvi/assembly/preprocess.py' 2021-07-28T15:33:06,113 adding 'jcvi/assembly/sim.py' 2021-07-28T15:33:06,115 adding 'jcvi/assembly/soap.py' 2021-07-28T15:33:06,116 adding 'jcvi/assembly/sspace.py' 2021-07-28T15:33:06,119 adding 'jcvi/assembly/syntenypath.py' 2021-07-28T15:33:06,120 adding 'jcvi/assembly/trinity.py' 2021-07-28T15:33:06,122 adding 'jcvi/assembly/unitig.py' 2021-07-28T15:33:06,124 adding 'jcvi/compara/__init__.py' 2021-07-28T15:33:06,125 adding 'jcvi/compara/__main__.py' 2021-07-28T15:33:06,127 adding 'jcvi/compara/blastfilter.py' 2021-07-28T15:33:06,131 adding 'jcvi/compara/catalog.py' 2021-07-28T15:33:06,135 adding 'jcvi/compara/fractionation.py' 2021-07-28T15:33:06,137 adding 'jcvi/compara/pad.py' 2021-07-28T15:33:06,138 adding 'jcvi/compara/phylogeny.py' 2021-07-28T15:33:06,140 adding 'jcvi/compara/quota.py' 2021-07-28T15:33:06,142 adding 'jcvi/compara/reconstruct.py' 2021-07-28T15:33:06,144 adding 'jcvi/compara/synfind.py' 2021-07-28T15:33:06,153 adding 'jcvi/compara/synteny.py' 2021-07-28T15:33:06,155 adding 'jcvi/formats/__init__.py' 2021-07-28T15:33:06,157 adding 'jcvi/formats/__main__.py' 2021-07-28T15:33:06,158 adding 'jcvi/formats/ace.py' 2021-07-28T15:33:06,166 adding 'jcvi/formats/agp.py' 2021-07-28T15:33:06,171 adding 'jcvi/formats/base.py' 2021-07-28T15:33:06,181 adding 'jcvi/formats/bed.py' 2021-07-28T15:33:06,187 adding 'jcvi/formats/blast.py' 2021-07-28T15:33:06,189 adding 'jcvi/formats/btab.py' 2021-07-28T15:33:06,331 adding 'jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so' 2021-07-28T15:33:06,338 adding 'jcvi/formats/cblast.pyx' 2021-07-28T15:33:06,339 adding 'jcvi/formats/cdt.py' 2021-07-28T15:33:06,341 adding 'jcvi/formats/chain.py' 2021-07-28T15:33:06,342 adding 'jcvi/formats/contig.py' 2021-07-28T15:33:06,345 adding 'jcvi/formats/coords.py' 2021-07-28T15:33:06,346 adding 'jcvi/formats/excel.py' 2021-07-28T15:33:06,356 adding 'jcvi/formats/fasta.py' 2021-07-28T15:33:06,360 adding 'jcvi/formats/fastq.py' 2021-07-28T15:33:06,362 adding 'jcvi/formats/fpc.py' 2021-07-28T15:33:06,364 adding 'jcvi/formats/genbank.py' 2021-07-28T15:33:06,378 adding 'jcvi/formats/gff.py' 2021-07-28T15:33:06,381 adding 'jcvi/formats/html.py' 2021-07-28T15:33:06,382 adding 'jcvi/formats/maf.py' 2021-07-28T15:33:06,383 adding 'jcvi/formats/obo.py' 2021-07-28T15:33:06,385 adding 'jcvi/formats/paf.py' 2021-07-28T15:33:06,386 adding 'jcvi/formats/pdf.py' 2021-07-28T15:33:06,387 adding 'jcvi/formats/posmap.py' 2021-07-28T15:33:06,389 adding 'jcvi/formats/psl.py' 2021-07-28T15:33:06,391 adding 'jcvi/formats/pyblast.py' 2021-07-28T15:33:06,394 adding 'jcvi/formats/sam.py' 2021-07-28T15:33:06,396 adding 'jcvi/formats/sbt.py' 2021-07-28T15:33:06,398 adding 'jcvi/formats/sizes.py' 2021-07-28T15:33:06,401 adding 'jcvi/formats/vcf.py' 2021-07-28T15:33:06,403 adding 'jcvi/graphics/__init__.py' 2021-07-28T15:33:06,404 adding 'jcvi/graphics/__main__.py' 2021-07-28T15:33:06,407 adding 'jcvi/graphics/align.py' 2021-07-28T15:33:06,409 adding 'jcvi/graphics/assembly.py' 2021-07-28T15:33:06,413 adding 'jcvi/graphics/base.py' 2021-07-28T15:33:06,415 adding 'jcvi/graphics/blastplot.py' 2021-07-28T15:33:06,418 adding 'jcvi/graphics/chromosome.py' 2021-07-28T15:33:06,420 adding 'jcvi/graphics/coverage.py' 2021-07-28T15:33:06,422 adding 'jcvi/graphics/dotplot.py' 2021-07-28T15:33:06,425 adding 'jcvi/graphics/glyph.py' 2021-07-28T15:33:06,429 adding 'jcvi/graphics/grabseeds.py' 2021-07-28T15:33:06,430 adding 'jcvi/graphics/graph.py' 2021-07-28T15:33:06,432 adding 'jcvi/graphics/heatmap.py' 2021-07-28T15:33:06,434 adding 'jcvi/graphics/histogram.py' 2021-07-28T15:33:06,436 adding 'jcvi/graphics/karyotype.py' 2021-07-28T15:33:06,441 adding 'jcvi/graphics/landscape.py' 2021-07-28T15:33:06,442 adding 'jcvi/graphics/logo.py' 2021-07-28T15:33:06,444 adding 'jcvi/graphics/mummerplot.py' 2021-07-28T15:33:06,446 adding 'jcvi/graphics/synteny.py' 2021-07-28T15:33:06,448 adding 'jcvi/graphics/table.py' 2021-07-28T15:33:06,451 adding 'jcvi/graphics/tree.py' 2021-07-28T15:33:06,452 adding 'jcvi/graphics/wheel.py' 2021-07-28T15:33:06,454 adding 'jcvi/graphics/whisker.py' 2021-07-28T15:33:06,455 adding 'jcvi/projects/__init__.py' 2021-07-28T15:33:06,456 adding 'jcvi/projects/__main__.py' 2021-07-28T15:33:06,459 adding 'jcvi/projects/age.py' 2021-07-28T15:33:06,460 adding 'jcvi/projects/alfalfa.py' 2021-07-28T15:33:06,463 adding 'jcvi/projects/allmaps.py' 2021-07-28T15:33:06,465 adding 'jcvi/projects/bites.py' 2021-07-28T15:33:06,466 adding 'jcvi/projects/heterosis.py' 2021-07-28T15:33:06,469 adding 'jcvi/projects/ies.py' 2021-07-28T15:33:06,472 adding 'jcvi/projects/misc.py' 2021-07-28T15:33:06,475 adding 'jcvi/projects/napus.py' 2021-07-28T15:33:06,478 adding 'jcvi/projects/pineapple.py' 2021-07-28T15:33:06,479 adding 'jcvi/projects/pistachio.py' 2021-07-28T15:33:06,487 adding 'jcvi/projects/str.py' 2021-07-28T15:33:06,490 adding 'jcvi/projects/sugarcane.py' 2021-07-28T15:33:06,494 adding 'jcvi/projects/synfind.py' 2021-07-28T15:33:06,497 adding 'jcvi/projects/tgbs.py' 2021-07-28T15:33:06,499 adding 'jcvi/projects/vanilla.py' 2021-07-28T15:33:06,505 adding 'jcvi/utils/__init__.py' 2021-07-28T15:33:06,506 adding 'jcvi/utils/__main__.py' 2021-07-28T15:33:06,510 adding 'jcvi/utils/aws.py' 2021-07-28T15:33:06,513 adding 'jcvi/utils/brewer2mpl.py' 2021-07-28T15:33:06,515 adding 'jcvi/utils/cbook.py' 2021-07-28T15:33:06,517 adding 'jcvi/utils/counter.py' 2021-07-28T15:33:06,519 adding 'jcvi/utils/db.py' 2021-07-28T15:33:06,521 adding 'jcvi/utils/ez_setup.py' 2021-07-28T15:33:06,523 adding 'jcvi/utils/grouper.py' 2021-07-28T15:33:06,525 adding 'jcvi/utils/iter.py' 2021-07-28T15:33:06,527 adding 'jcvi/utils/natsort.py' 2021-07-28T15:33:06,529 adding 'jcvi/utils/orderedcollections.py' 2021-07-28T15:33:06,532 adding 'jcvi/utils/progressbar.py' 2021-07-28T15:33:06,535 adding 'jcvi/utils/range.py' 2021-07-28T15:33:06,537 adding 'jcvi/utils/table.py' 2021-07-28T15:33:06,538 adding 'jcvi/utils/taxonomy.py' 2021-07-28T15:33:06,541 adding 'jcvi/utils/webcolors.py' 2021-07-28T15:33:06,545 adding 'jcvi/utils/data/Airswing.ttf' 2021-07-28T15:33:06,562 adding 'jcvi/utils/data/Collegia.ttf' 2021-07-28T15:33:06,567 adding 'jcvi/utils/data/HookedUp.ttf' 2021-07-28T15:33:06,572 adding 'jcvi/utils/data/Humor-Sans.ttf' 2021-07-28T15:33:06,576 adding 'jcvi/utils/data/TREDs.meta.csv' 2021-07-28T15:33:06,578 adding 'jcvi/utils/data/__init__.py' 2021-07-28T15:33:06,579 adding 'jcvi/utils/data/adapters.fasta' 2021-07-28T15:33:06,580 adding 'jcvi/utils/data/blosum80.mat' 2021-07-28T15:33:06,582 adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc' 2021-07-28T15:33:06,588 adding 'jcvi/utils/data/colorbrewer_all_schemes.json' 2021-07-28T15:33:06,589 adding 'jcvi/utils/data/colorchecker.txt' 2021-07-28T15:33:06,596 adding 'jcvi/utils/data/hg38.band.txt' 2021-07-28T15:33:06,599 adding 'jcvi/utils/data/hg38.chrom.sizes' 2021-07-28T15:33:06,600 adding 'jcvi/utils/data/instance.json' 2021-07-28T15:33:06,602 adding 'jcvi/variation/__init__.py' 2021-07-28T15:33:06,603 adding 'jcvi/variation/__main__.py' 2021-07-28T15:33:06,608 adding 'jcvi/variation/cnv.py' 2021-07-28T15:33:06,610 adding 'jcvi/variation/deconvolute.py' 2021-07-28T15:33:06,612 adding 'jcvi/variation/delly.py' 2021-07-28T15:33:06,614 adding 'jcvi/variation/impute.py' 2021-07-28T15:33:06,615 adding 'jcvi/variation/phase.py' 2021-07-28T15:33:06,617 adding 'jcvi/variation/snp.py' 2021-07-28T15:33:06,624 adding 'jcvi/variation/str.py' 2021-07-28T15:33:06,626 adding 'jcvi/variation/tassel.py' 2021-07-28T15:33:06,628 adding 'jcvi-1.0.14.dist-info/LICENSE' 2021-07-28T15:33:06,630 adding 'jcvi-1.0.14.dist-info/METADATA' 2021-07-28T15:33:06,631 adding 'jcvi-1.0.14.dist-info/WHEEL' 2021-07-28T15:33:06,632 adding 'jcvi-1.0.14.dist-info/top_level.txt' 2021-07-28T15:33:06,635 adding 'jcvi-1.0.14.dist-info/RECORD' 2021-07-28T15:33:06,659 removing build/bdist.linux-armv7l/wheel 2021-07-28T15:33:06,978 Building wheel for jcvi (setup.py): finished with status 'done' 2021-07-28T15:33:06,998 Created wheel for jcvi: filename=jcvi-1.0.14-cp39-cp39-linux_armv7l.whl size=1266293 sha256=3ed986b4329a889bc4b17c87cbaf44ff10908f9149240c39457d084b7ceca71b 2021-07-28T15:33:06,998 Stored in directory: /tmp/pip-ephem-wheel-cache-3hg8ql7h/wheels/aa/c5/88/5a519615803516faeeed0f026ed107bc95cc0e8c5c84074969 2021-07-28T15:33:07,015 Successfully built jcvi 2021-07-28T15:33:07,059 Removed build tracker: '/tmp/pip-req-tracker-kw_xh1rq'