2021-07-28T15:51:14,062 Created temporary directory: /tmp/pip-ephem-wheel-cache-7fc9j637 2021-07-28T15:51:14,065 Created temporary directory: /tmp/pip-req-tracker-a8modzh_ 2021-07-28T15:51:14,066 Initialized build tracking at /tmp/pip-req-tracker-a8modzh_ 2021-07-28T15:51:14,066 Created build tracker: /tmp/pip-req-tracker-a8modzh_ 2021-07-28T15:51:14,066 Entered build tracker: /tmp/pip-req-tracker-a8modzh_ 2021-07-28T15:51:14,066 Created temporary directory: /tmp/pip-wheel-g_j4_i9f 2021-07-28T15:51:14,097 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-28T15:51:14,097 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-28T15:51:14,098 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-28T15:51:14,098 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-28T15:51:14,098 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-28T15:51:14,104 WARNING: Location '/medspacy-simstring/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:51:14,104 WARNING: Location 't/medspacy-simstring/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:51:14,104 WARNING: Location 'm/medspacy-simstring/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:51:14,105 WARNING: Location 'p/medspacy-simstring/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T15:51:14,105 1 location(s) to search for versions of medspacy-simstring: 2021-07-28T15:51:14,105 * https://pypi.org/simple/medspacy-simstring/ 2021-07-28T15:51:14,105 Fetching project page and analyzing links: https://pypi.org/simple/medspacy-simstring/ 2021-07-28T15:51:14,106 Getting page https://pypi.org/simple/medspacy-simstring/ 2021-07-28T15:51:14,107 Found index url https://pypi.org/simple 2021-07-28T15:51:14,288 Found link https://files.pythonhosted.org/packages/2e/fc/96053978ae96c8527fdad53ce0c92ca2fb5e0cc2e0a496fd37e277cf277b/medspacy_simstring-2.1.tar.gz#sha256=b9e64f9e56dfadce0ef890205ea4be81bb9a4a2bce680b1cc6f7ab6e2c6746cb (from https://pypi.org/simple/medspacy-simstring/), version: 2.1 2021-07-28T15:51:14,289 Skipping link: not a file: https://pypi.org/simple/medspacy-simstring/ 2021-07-28T15:51:14,305 Given no hashes to check 1 links for project 'medspacy-simstring': discarding no candidates 2021-07-28T15:51:14,321 Collecting medspacy-simstring==2.1 2021-07-28T15:51:14,323 Created temporary directory: /tmp/pip-unpack-xc4vy35b 2021-07-28T15:51:14,545 Downloading medspacy_simstring-2.1.tar.gz (68 kB) 2021-07-28T15:51:14,621 Added medspacy-simstring==2.1 from https://files.pythonhosted.org/packages/2e/fc/96053978ae96c8527fdad53ce0c92ca2fb5e0cc2e0a496fd37e277cf277b/medspacy_simstring-2.1.tar.gz#sha256=b9e64f9e56dfadce0ef890205ea4be81bb9a4a2bce680b1cc6f7ab6e2c6746cb to build tracker '/tmp/pip-req-tracker-a8modzh_' 2021-07-28T15:51:14,622 Running setup.py (path:/tmp/pip-wheel-g_j4_i9f/medspacy-simstring_fb79ad005b484eaf8298937f378f84c6/setup.py) egg_info for package medspacy-simstring 2021-07-28T15:51:14,623 Created temporary directory: /tmp/pip-pip-egg-info-r94x972k 2021-07-28T15:51:14,623 Running command python setup.py egg_info 2021-07-28T15:51:15,415 running egg_info 2021-07-28T15:51:15,417 creating /tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info 2021-07-28T15:51:15,418 writing /tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info/PKG-INFO 2021-07-28T15:51:15,420 writing dependency_links to /tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info/dependency_links.txt 2021-07-28T15:51:15,423 writing top-level names to /tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info/top_level.txt 2021-07-28T15:51:15,424 writing manifest file '/tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info/SOURCES.txt' 2021-07-28T15:51:15,741 reading manifest file '/tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info/SOURCES.txt' 2021-07-28T15:51:15,744 writing manifest file '/tmp/pip-pip-egg-info-r94x972k/medspacy_simstring.egg-info/SOURCES.txt' 2021-07-28T15:51:15,820 Source in /tmp/pip-wheel-g_j4_i9f/medspacy-simstring_fb79ad005b484eaf8298937f378f84c6 has version 2.1, which satisfies requirement medspacy-simstring==2.1 from https://files.pythonhosted.org/packages/2e/fc/96053978ae96c8527fdad53ce0c92ca2fb5e0cc2e0a496fd37e277cf277b/medspacy_simstring-2.1.tar.gz#sha256=b9e64f9e56dfadce0ef890205ea4be81bb9a4a2bce680b1cc6f7ab6e2c6746cb 2021-07-28T15:51:15,821 Removed medspacy-simstring==2.1 from https://files.pythonhosted.org/packages/2e/fc/96053978ae96c8527fdad53ce0c92ca2fb5e0cc2e0a496fd37e277cf277b/medspacy_simstring-2.1.tar.gz#sha256=b9e64f9e56dfadce0ef890205ea4be81bb9a4a2bce680b1cc6f7ab6e2c6746cb from build tracker '/tmp/pip-req-tracker-a8modzh_' 2021-07-28T15:51:15,825 Created temporary directory: /tmp/pip-unpack-4tccf48o 2021-07-28T15:51:15,826 Building wheels for collected packages: medspacy-simstring 2021-07-28T15:51:15,830 Created temporary directory: /tmp/pip-wheel-h0uu7o5j 2021-07-28T15:51:15,830 Building wheel for medspacy-simstring (setup.py): started 2021-07-28T15:51:15,831 Destination directory: /tmp/pip-wheel-h0uu7o5j 2021-07-28T15:51:15,831 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-g_j4_i9f/medspacy-simstring_fb79ad005b484eaf8298937f378f84c6/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-g_j4_i9f/medspacy-simstring_fb79ad005b484eaf8298937f378f84c6/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-h0uu7o5j 2021-07-28T15:51:16,608 running bdist_wheel 2021-07-28T15:51:16,762 running build 2021-07-28T15:51:16,762 running build_py 2021-07-28T15:51:16,902 creating build 2021-07-28T15:51:16,903 creating build/lib.linux-armv7l-3.9 2021-07-28T15:51:16,903 creating build/lib.linux-armv7l-3.9/quickumls_simstring 2021-07-28T15:51:16,904 copying quickumls_simstring/simstring.py -> build/lib.linux-armv7l-3.9/quickumls_simstring 2021-07-28T15:51:16,907 copying quickumls_simstring/__init__.py -> build/lib.linux-armv7l-3.9/quickumls_simstring 2021-07-28T15:51:16,909 running build_ext 2021-07-28T15:51:16,914 building 'quickumls_simstring/_simstring' extension 2021-07-28T15:51:16,915 creating build/temp.linux-armv7l-3.9 2021-07-28T15:51:16,915 creating build/temp.linux-armv7l-3.9/quickumls_simstring 2021-07-28T15:51:16,916 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.9 -c quickumls_simstring/export.cpp -o build/temp.linux-armv7l-3.9/quickumls_simstring/export.o 2021-07-28T15:51:18,787 In file included from quickumls_simstring/export.cpp:8: 2021-07-28T15:51:18,787 ./quickumls_simstring/simstring/simstring.h: In member function ‘bool simstring::reader::open(const string&)’: 2021-07-28T15:51:18,787 ./quickumls_simstring/simstring/simstring.h:838:18: warning: variable ‘num_entries’ set but not used [-Wunused-but-set-variable] 2021-07-28T15:51:18,787 838 | uint32_t num_entries, max_size; 2021-07-28T15:51:18,787 | ^~~~~~~~~~~ 2021-07-28T15:51:18,803 ./quickumls_simstring/simstring/simstring.h: In member function ‘bool simstring::reader::check(const string_type&, double)’: 2021-07-28T15:51:18,803 ./quickumls_simstring/simstring/simstring.h:1020:50: warning: typedef ‘char_type’ locally defined but not used [-Wunused-local-typedefs] 2021-07-28T15:51:18,803 1020 | typedef typename string_type::value_type char_type; 2021-07-28T15:51:18,804 | ^~~~~~~~~ 2021-07-28T15:51:18,833 quickumls_simstring/export.cpp: In destructor ‘virtual writer::~writer()’: 2021-07-28T15:51:18,833 quickumls_simstring/export.cpp:121:9: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 2021-07-28T15:51:18,834 121 | throw std::runtime_error(message); 2021-07-28T15:51:18,834 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-28T15:51:18,834 quickumls_simstring/export.cpp:121:9: note: in C++11 destructors default to ‘noexcept’ 2021-07-28T15:51:18,834 quickumls_simstring/export.cpp:135:9: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 2021-07-28T15:51:18,834 135 | throw std::runtime_error(message); 2021-07-28T15:51:18,834 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-28T15:51:18,835 quickumls_simstring/export.cpp:135:9: note: in C++11 destructors default to ‘noexcept’ 2021-07-28T15:51:43,879 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.9 -c quickumls_simstring/export_wrap.cpp -o build/temp.linux-armv7l-3.9/quickumls_simstring/export_wrap.o 2021-07-28T15:51:50,695 In file included from /usr/include/string.h:495, 2021-07-28T15:51:50,695 from /usr/include/python3.9/Python.h:30, 2021-07-28T15:51:50,695 from quickumls_simstring/export_wrap.cpp:154: 2021-07-28T15:51:50,695 In function ‘char* strncpy(char*, const char*, size_t)’, 2021-07-28T15:51:50,695 inlined from ‘void SWIG_Python_FixMethods(PyMethodDef*, swig_const_info*, swig_type_info**, swig_type_info**)’ at quickumls_simstring/export_wrap.cpp:9059:22, 2021-07-28T15:51:50,696 inlined from ‘PyObject* PyInit__simstring()’ at quickumls_simstring/export_wrap.cpp:9157:25: 2021-07-28T15:51:50,696 /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output truncated before terminating nul copying 10 bytes from a string of the same length [-Wstringop-truncation] 2021-07-28T15:51:50,696 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); 2021-07-28T15:51:50,696 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-28T15:51:56,185 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/quickumls_simstring/export.o build/temp.linux-armv7l-3.9/quickumls_simstring/export_wrap.o -o build/lib.linux-armv7l-3.9/quickumls_simstring/_simstring.cpython-39-arm-linux-gnueabihf.so 2021-07-28T15:51:56,805 installing to build/bdist.linux-armv7l/wheel 2021-07-28T15:51:56,806 running install 2021-07-28T15:51:56,808 running install_lib 2021-07-28T15:51:56,809 creating build/bdist.linux-armv7l 2021-07-28T15:51:56,809 creating build/bdist.linux-armv7l/wheel 2021-07-28T15:51:56,811 creating build/bdist.linux-armv7l/wheel/quickumls_simstring 2021-07-28T15:51:56,812 copying build/lib.linux-armv7l-3.9/quickumls_simstring/simstring.py -> build/bdist.linux-armv7l/wheel/quickumls_simstring 2021-07-28T15:51:56,816 copying build/lib.linux-armv7l-3.9/quickumls_simstring/__init__.py -> build/bdist.linux-armv7l/wheel/quickumls_simstring 2021-07-28T15:51:56,817 copying build/lib.linux-armv7l-3.9/quickumls_simstring/_simstring.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/quickumls_simstring 2021-07-28T15:51:56,903 running install_egg_info 2021-07-28T15:51:56,930 running egg_info 2021-07-28T15:51:56,930 creating medspacy_simstring.egg-info 2021-07-28T15:51:56,931 writing medspacy_simstring.egg-info/PKG-INFO 2021-07-28T15:51:56,933 writing dependency_links to medspacy_simstring.egg-info/dependency_links.txt 2021-07-28T15:51:56,935 writing top-level names to medspacy_simstring.egg-info/top_level.txt 2021-07-28T15:51:56,937 writing manifest file 'medspacy_simstring.egg-info/SOURCES.txt' 2021-07-28T15:51:56,942 reading manifest file 'medspacy_simstring.egg-info/SOURCES.txt' 2021-07-28T15:51:56,945 writing manifest file 'medspacy_simstring.egg-info/SOURCES.txt' 2021-07-28T15:51:56,947 Copying medspacy_simstring.egg-info to build/bdist.linux-armv7l/wheel/medspacy_simstring-2.1-py3.9.egg-info 2021-07-28T15:51:56,956 running install_scripts 2021-07-28T15:51:57,033 creating build/bdist.linux-armv7l/wheel/medspacy_simstring-2.1.dist-info/WHEEL 2021-07-28T15:51:57,035 creating '/tmp/pip-wheel-h0uu7o5j/medspacy_simstring-2.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-28T15:51:57,038 adding 'quickumls_simstring/__init__.py' 2021-07-28T15:51:57,675 adding 'quickumls_simstring/_simstring.so' 2021-07-28T15:51:57,711 adding 'quickumls_simstring/simstring.py' 2021-07-28T15:51:57,712 adding 'medspacy_simstring-2.1.dist-info/METADATA' 2021-07-28T15:51:57,713 adding 'medspacy_simstring-2.1.dist-info/WHEEL' 2021-07-28T15:51:57,714 adding 'medspacy_simstring-2.1.dist-info/top_level.txt' 2021-07-28T15:51:57,714 adding 'medspacy_simstring-2.1.dist-info/RECORD' 2021-07-28T15:51:57,734 removing build/bdist.linux-armv7l/wheel 2021-07-28T15:51:57,830 Building wheel for medspacy-simstring (setup.py): finished with status 'done' 2021-07-28T15:51:57,849 Created wheel for medspacy-simstring: filename=medspacy_simstring-2.1-cp39-cp39-linux_armv7l.whl size=1255755 sha256=444d1aa4e4c999e2315bf00813de803723c2b66f8f0e6b37131f871e3d2f51bb 2021-07-28T15:51:57,849 Stored in directory: /tmp/pip-ephem-wheel-cache-7fc9j637/wheels/99/f4/d1/233bc6c0bd14c4102a06bf21fc03a116e9d830db4f6595d109 2021-07-28T15:51:57,858 Successfully built medspacy-simstring 2021-07-28T15:51:57,902 Removed build tracker: '/tmp/pip-req-tracker-a8modzh_'