2021-07-28T22:58:58,489 Created temporary directory: /tmp/pip-ephem-wheel-cache-4h8fwg4y 2021-07-28T22:58:58,492 Created temporary directory: /tmp/pip-req-tracker-6stz2d4q 2021-07-28T22:58:58,492 Initialized build tracking at /tmp/pip-req-tracker-6stz2d4q 2021-07-28T22:58:58,492 Created build tracker: /tmp/pip-req-tracker-6stz2d4q 2021-07-28T22:58:58,493 Entered build tracker: /tmp/pip-req-tracker-6stz2d4q 2021-07-28T22:58:58,493 Created temporary directory: /tmp/pip-wheel-ompkar49 2021-07-28T22:58:58,524 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-28T22:58:58,525 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-28T22:58:58,525 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-28T22:58:58,525 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-28T22:58:58,525 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-28T22:58:58,528 WARNING: Location '/dadi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T22:58:58,528 WARNING: Location 't/dadi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T22:58:58,529 WARNING: Location 'm/dadi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T22:58:58,529 WARNING: Location 'p/dadi/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T22:58:58,529 1 location(s) to search for versions of dadi: 2021-07-28T22:58:58,529 * https://pypi.org/simple/dadi/ 2021-07-28T22:58:58,530 Fetching project page and analyzing links: https://pypi.org/simple/dadi/ 2021-07-28T22:58:58,530 Getting page https://pypi.org/simple/dadi/ 2021-07-28T22:58:58,532 Found index url https://pypi.org/simple 2021-07-28T22:58:58,752 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/a0/90/3c79d2526f0a8d618db53d12845c82e0c4da4d26e8cf3180a7d7074f348a/dadi-1.9.92-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=f512d91bb45eaa4463ef9d8b7e3391d9d5292428f2179e73d0859d319e444a9c (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,752 Found link https://files.pythonhosted.org/packages/41/b7/79564b96938451691e1505554798f4d62748ea25d64bf589e883455938da/dadi-1.9.92.tar.gz#sha256=c842ed5641b46d5d0ba5a5f3a7bc0ab7a588324e376ecc0743514448eb080611 (from https://pypi.org/simple/dadi/), version: 1.9.92 2021-07-28T22:58:58,752 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/53/5e/fea903fd0c54bdd9d87e9d0a8e552204f4596bcbb40173d469742ac1ab6d/dadi-2.0.1-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=80bd4d1a3157545b92a43840613d325d4e493e1a7df0154cc5572d4e6cda8a3b (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,753 Found link https://files.pythonhosted.org/packages/06/94/dbf599959d8a04ea52c520414d1af185a8f57cd2c2be7181af97e927852a/dadi-2.0.1.tar.gz#sha256=a3bf1d780eb97bd3a9804c063e5a463ca8b7c9bb2a4bc21b23ef0b5192d67be3 (from https://pypi.org/simple/dadi/), version: 2.0.1 2021-07-28T22:58:58,753 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/2e/b8/8b868a117552fde24a5d513e8673fa059bd106fc87c1bb8743b000cc343d/dadi-2.0.2-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=de3bc70b1c95c750e641e0e1b05ce757bd8894b1ab61406483a6281144458b43 (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,753 Found link https://files.pythonhosted.org/packages/05/3c/0679df7beac434aa1dfaae53ef4b1717d849dcc8b7eadf2ef0f42545f22c/dadi-2.0.2.tar.gz#sha256=91013eaca614600944254e8618e02de188461cb35d6a1fdf8133b2acd722803d (from https://pypi.org/simple/dadi/), version: 2.0.2 2021-07-28T22:58:58,753 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/2b/87/9645c8580abd51d5be25532f7927e067020cf03871b5a1468c29849a72af/dadi-2.0.3-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=bfb0af514aacae0da5be85f15cb562d851e44406dacb419770f59d16e28540a7 (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,754 Found link https://files.pythonhosted.org/packages/20/43/6bb9b18f73e31701eeff2f69ca3964ea8ce483bd444ecb4c8bc3a20350f1/dadi-2.0.3.tar.gz#sha256=3c0259325ae9bdb803f310973d4624d0054e2afa9fae5a5d1fa6d31aaec637b7 (from https://pypi.org/simple/dadi/), version: 2.0.3 2021-07-28T22:58:58,754 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/3b/59/aef8d0105a55ea7024c0fdae8b5d981bc02ae2dce6c962a3ab5c838c87ee/dadi-2.0.4-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=0556c2f6d7f20e45ee485ee247661bf04f5613062bfa292d3e7e4625ebcd8571 (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,754 Found link https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz#sha256=e50112a06678f795155e963caf4800936399b231bb7d063e735d26357ec6f645 (from https://pypi.org/simple/dadi/), version: 2.0.4 2021-07-28T22:58:58,755 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/b9/12/7c937c7d55f57f519b15ae85b3a893915a91aeddeb86b60d204d9b8a0b95/dadi-2.0.5-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=addb28c6c845ea8380d98068e88ba009111aabc8a1f1d9e8de3bdccde39c92ff (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,755 Found link https://files.pythonhosted.org/packages/1d/79/b0703bf0a3bccfd46243719970c4c12ef9d25702c1c1f11a38cd858feeba/dadi-2.0.5.tar.gz#sha256=6a14fc996062bfd7bcfda5a08177458fc12dd2e14dda5d78f94e91db32d97b45 (from https://pypi.org/simple/dadi/), version: 2.0.5 2021-07-28T22:58:58,755 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/bf/ec/4028c2bc860bc5fd000757a85580f06d372cf0093ad3d69fc337f4e3638f/dadi-2.0.6-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=1711d2b5dbf96df7ee42e3b1e56f74eeec04b27b207b10c470984f0d98ffdb06 (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,755 Found link https://files.pythonhosted.org/packages/8f/37/bd2a39f621a56e9c48d8bfe234583e1de6548c78fb56ada775e0f660ecd4/dadi-2.0.6.tar.gz#sha256=41727bf965005f3345493eb53d424631a315768a3ba054530a7e13259c6e2a9c (from https://pypi.org/simple/dadi/), version: 2.0.6 2021-07-28T22:58:58,756 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/68/7a/555e1602617ed94760f124020cd81e93387a50111223161fa1aef70fc203/dadi-2.1.0-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=abe233ee9114b0f6a672ccedfdafe019cec46ab4006b86bf3e6d057ecd96784d (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,756 Found link https://files.pythonhosted.org/packages/ef/2d/b8636392a28b5d7fe2665a15ab9899651ed7e2af7264c8685e648371aa5c/dadi-2.1.0.tar.gz#sha256=97a15aa7ef501850cad4cff66b11b66ecb65d5d68acbf2ff713585c81c3a1038 (from https://pypi.org/simple/dadi/), version: 2.1.0 2021-07-28T22:58:58,756 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/a9/c7/ee88baf9a99dcca548908e6ecada3994098b18084ee3b796600b471eaa0c/dadi-2.1.1-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=d2f7e89226ffb60061d9baeaaf77725d0e8502a7a784af9c3b8b8d6e68f879f6 (from https://pypi.org/simple/dadi/) 2021-07-28T22:58:58,756 Found link https://files.pythonhosted.org/packages/ce/ab/d47b4d850b6974c0d1352547c8962facd2550225ddf2aa7aa6d96d73ec8d/dadi-2.1.1.tar.gz#sha256=d1d69568610ddf2f4283917825042c1ceafd4f23bcd06c628eef170bdb5271a2 (from https://pypi.org/simple/dadi/), version: 2.1.1 2021-07-28T22:58:58,757 Skipping link: not a file: https://pypi.org/simple/dadi/ 2021-07-28T22:58:58,774 Given no hashes to check 1 links for project 'dadi': discarding no candidates 2021-07-28T22:58:58,791 Collecting dadi==2.1.1 2021-07-28T22:58:58,792 Created temporary directory: /tmp/pip-unpack-z9wv2qmi 2021-07-28T22:58:58,835 Downloading dadi-2.1.1.tar.gz (1.6 MB) 2021-07-28T22:58:59,757 Added dadi==2.1.1 from https://files.pythonhosted.org/packages/ce/ab/d47b4d850b6974c0d1352547c8962facd2550225ddf2aa7aa6d96d73ec8d/dadi-2.1.1.tar.gz#sha256=d1d69568610ddf2f4283917825042c1ceafd4f23bcd06c628eef170bdb5271a2 to build tracker '/tmp/pip-req-tracker-6stz2d4q' 2021-07-28T22:58:59,758 Running setup.py (path:/tmp/pip-wheel-ompkar49/dadi_7f789457b20d487792cf054c6644bc60/setup.py) egg_info for package dadi 2021-07-28T22:58:59,759 Created temporary directory: /tmp/pip-pip-egg-info-749cvi5g 2021-07-28T22:58:59,759 Running command python setup.py egg_info 2021-07-28T22:59:01,118 running egg_info 2021-07-28T22:59:01,121 running build_src 2021-07-28T22:59:01,123 build_src 2021-07-28T22:59:01,123 building extension "dadi.tridiag" sources 2021-07-28T22:59:01,125 creating build 2021-07-28T22:59:01,125 creating build/src.linux-armv7l-3.9 2021-07-28T22:59:01,126 creating build/src.linux-armv7l-3.9/dadi 2021-07-28T22:59:01,126 f2py options: [] 2021-07-28T22:59:01,127 f2py: dadi/tridiag.pyf 2021-07-28T22:59:01,339 Reading fortran codes... 2021-07-28T22:59:01,340 Reading file 'dadi/tridiag.pyf' (format:free) 2021-07-28T22:59:01,340 Line #5 in dadi/tridiag.pyf:" intent(c) " 2021-07-28T22:59:01,340 All arguments will have attribute intent(c) 2021-07-28T22:59:01,340 Line #15 in dadi/tridiag.pyf:" intent(c) " 2021-07-28T22:59:01,340 All arguments will have attribute intent(c) 2021-07-28T22:59:01,341 Post-processing... 2021-07-28T22:59:01,341 Block: tridiag 2021-07-28T22:59:01,341 Block: tridiag 2021-07-28T22:59:01,341 Block: tridiag_fl 2021-07-28T22:59:01,341 Post-processing (stage 2)... 2021-07-28T22:59:01,341 Building modules... 2021-07-28T22:59:01,342 Building module "tridiag"... 2021-07-28T22:59:01,342 Constructing wrapper function "tridiag"... 2021-07-28T22:59:01,342 u = tridiag(a,b,c,r) 2021-07-28T22:59:01,342 Constructing wrapper function "tridiag_fl"... 2021-07-28T22:59:01,342 u = tridiag_fl(a,b,c,r) 2021-07-28T22:59:01,342 Wrote C/API module "tridiag" to file "build/src.linux-armv7l-3.9/dadi/tridiagmodule.c" 2021-07-28T22:59:01,343 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.c' to sources. 2021-07-28T22:59:01,343 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi' to include_dirs. 2021-07-28T22:59:01,343 creating build/src.linux-armv7l-3.9/build 2021-07-28T22:59:01,343 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-28T22:59:01,343 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi 2021-07-28T22:59:01,344 copying /usr/local/lib/python3.9/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi 2021-07-28T22:59:01,347 copying /usr/local/lib/python3.9/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi 2021-07-28T22:59:01,349 building extension "dadi.integration_c" sources 2021-07-28T22:59:01,350 f2py options: [] 2021-07-28T22:59:01,351 f2py: dadi/integration_c.pyf 2021-07-28T22:59:02,789 Reading fortran codes... 2021-07-28T22:59:02,790 Reading file 'dadi/integration_c.pyf' (format:free) 2021-07-28T22:59:02,790 Line #5 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,790 All arguments will have attribute intent(c) 2021-07-28T22:59:02,790 Line #18 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,791 All arguments will have attribute intent(c) 2021-07-28T22:59:02,791 Line #35 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,791 All arguments will have attribute intent(c) 2021-07-28T22:59:02,791 Line #52 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,791 All arguments will have attribute intent(c) 2021-07-28T22:59:02,791 Line #65 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,791 All arguments will have attribute intent(c) 2021-07-28T22:59:02,791 Line #78 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,791 All arguments will have attribute intent(c) 2021-07-28T22:59:02,791 Line #98 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,792 All arguments will have attribute intent(c) 2021-07-28T22:59:02,792 Line #118 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,792 All arguments will have attribute intent(c) 2021-07-28T22:59:02,792 Line #138 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,792 All arguments will have attribute intent(c) 2021-07-28T22:59:02,792 Line #152 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,792 All arguments will have attribute intent(c) 2021-07-28T22:59:02,792 Line #166 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,793 All arguments will have attribute intent(c) 2021-07-28T22:59:02,793 Line #180 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,793 All arguments will have attribute intent(c) 2021-07-28T22:59:02,793 Line #201 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,793 All arguments will have attribute intent(c) 2021-07-28T22:59:02,793 Line #222 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,793 All arguments will have attribute intent(c) 2021-07-28T22:59:02,793 Line #243 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,794 All arguments will have attribute intent(c) 2021-07-28T22:59:02,794 Line #264 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,794 All arguments will have attribute intent(c) 2021-07-28T22:59:02,794 Line #288 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,794 All arguments will have attribute intent(c) 2021-07-28T22:59:02,794 Line #312 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,794 All arguments will have attribute intent(c) 2021-07-28T22:59:02,795 Line #336 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,795 All arguments will have attribute intent(c) 2021-07-28T22:59:02,795 Line #360 in dadi/integration_c.pyf:" intent(c) " 2021-07-28T22:59:02,795 All arguments will have attribute intent(c) 2021-07-28T22:59:02,795 Post-processing... 2021-07-28T22:59:02,795 Block: integration_c 2021-07-28T22:59:02,795 Block: implicit_1Dx 2021-07-28T22:59:02,796 Block: implicit_2Dx 2021-07-28T22:59:02,796 Block: implicit_2Dy 2021-07-28T22:59:02,796 Block: implicit_precalc_2Dx 2021-07-28T22:59:02,796 Block: implicit_precalc_2Dy 2021-07-28T22:59:02,796 Block: implicit_3Dx 2021-07-28T22:59:02,796 Block: implicit_3Dy 2021-07-28T22:59:02,796 Block: implicit_3Dz 2021-07-28T22:59:02,797 Block: implicit_precalc_3Dx 2021-07-28T22:59:02,797 Block: implicit_precalc_3Dy 2021-07-28T22:59:02,797 Block: implicit_precalc_3Dz 2021-07-28T22:59:02,797 Block: implicit_4Dx 2021-07-28T22:59:02,797 Block: implicit_4Dy 2021-07-28T22:59:02,797 Block: implicit_4Dz 2021-07-28T22:59:02,797 Block: implicit_4Da 2021-07-28T22:59:02,798 Block: implicit_5Dx 2021-07-28T22:59:02,798 Block: implicit_5Dy 2021-07-28T22:59:02,798 Block: implicit_5Dz 2021-07-28T22:59:02,798 Block: implicit_5Da 2021-07-28T22:59:02,798 Block: implicit_5Db 2021-07-28T22:59:02,798 Post-processing (stage 2)... 2021-07-28T22:59:02,798 Building modules... 2021-07-28T22:59:02,799 Building module "integration_c"... 2021-07-28T22:59:02,799 Constructing wrapper function "implicit_1Dx"... 2021-07-28T22:59:02,799 phi = implicit_1Dx(phi,xx,nu,gamma,h,beta,dt,use_delj_trick) 2021-07-28T22:59:02,799 Constructing wrapper function "implicit_2Dx"... 2021-07-28T22:59:02,799 phi = implicit_2Dx(phi,xx,yy,nu1,m12,gamma1,h1,dt,use_delj_trick,[Mstart,Mend]) 2021-07-28T22:59:02,799 Constructing wrapper function "implicit_2Dy"... 2021-07-28T22:59:02,799 phi = implicit_2Dy(phi,xx,yy,nu2,m21,gamma2,h2,dt,use_delj_trick,[Lstart,Lend]) 2021-07-28T22:59:02,800 Constructing wrapper function "implicit_precalc_2Dx"... 2021-07-28T22:59:02,800 phi = implicit_precalc_2Dx(phi,ax,bx,cx,dt,[Mstart,Mend]) 2021-07-28T22:59:02,800 Constructing wrapper function "implicit_precalc_2Dy"... 2021-07-28T22:59:02,800 phi = implicit_precalc_2Dy(phi,ay,by,cy,dt,[Lstart,Lend]) 2021-07-28T22:59:02,800 Constructing wrapper function "implicit_3Dx"... 2021-07-28T22:59:02,800 phi = implicit_3Dx(phi,xx,yy,zz,nu1,m12,m13,gamma1,h1,dt,use_delj_trick,[Mstart,Mend]) 2021-07-28T22:59:02,800 Constructing wrapper function "implicit_3Dy"... 2021-07-28T22:59:02,801 phi = implicit_3Dy(phi,xx,yy,zz,nu2,m21,m23,gamma2,h2,dt,use_delj_trick,[Lstart,Lend]) 2021-07-28T22:59:02,801 Constructing wrapper function "implicit_3Dz"... 2021-07-28T22:59:02,801 phi = implicit_3Dz(phi,xx,yy,zz,nu3,m31,m32,gamma3,h3,dt,use_delj_trick,[Lstart,Lend]) 2021-07-28T22:59:02,801 Constructing wrapper function "implicit_precalc_3Dx"... 2021-07-28T22:59:02,801 phi = implicit_precalc_3Dx(phi,ax,bx,cx,dt,[Mstart,Mend]) 2021-07-28T22:59:02,801 Constructing wrapper function "implicit_precalc_3Dy"... 2021-07-28T22:59:02,801 phi = implicit_precalc_3Dy(phi,ay,by,cy,dt,[Lstart,Lend]) 2021-07-28T22:59:02,801 Constructing wrapper function "implicit_precalc_3Dz"... 2021-07-28T22:59:02,802 phi = implicit_precalc_3Dz(phi,az,bz,cz,dt,[Lstart,Lend]) 2021-07-28T22:59:02,802 Constructing wrapper function "implicit_4Dx"... 2021-07-28T22:59:02,802 phi = implicit_4Dx(phi,xx,yy,zz,aa,nu1,m12,m13,m14,gamma1,h1,dt,use_delj_trick) 2021-07-28T22:59:02,802 Constructing wrapper function "implicit_4Dy"... 2021-07-28T22:59:02,802 phi = implicit_4Dy(phi,xx,yy,zz,aa,nu2,m21,m23,m24,gamma2,h2,dt,use_delj_trick) 2021-07-28T22:59:02,802 Constructing wrapper function "implicit_4Dz"... 2021-07-28T22:59:02,802 phi = implicit_4Dz(phi,xx,yy,zz,aa,nu3,m31,m32,m34,gamma3,h3,dt,use_delj_trick) 2021-07-28T22:59:02,803 Constructing wrapper function "implicit_4Da"... 2021-07-28T22:59:02,803 phi = implicit_4Da(phi,xx,yy,zz,aa,nu4,m41,m42,m43,gamma4,h4,dt,use_delj_trick) 2021-07-28T22:59:02,803 Constructing wrapper function "implicit_5Dx"... 2021-07-28T22:59:02,803 phi = implicit_5Dx(phi,xx,yy,zz,aa,bb,nu1,m12,m13,m14,m15,gamma1,h1,dt,use_delj_trick) 2021-07-28T22:59:02,803 Constructing wrapper function "implicit_5Dy"... 2021-07-28T22:59:02,803 phi = implicit_5Dy(phi,xx,yy,zz,aa,bb,nu2,m21,m23,m24,m25,gamma2,h2,dt,use_delj_trick) 2021-07-28T22:59:02,803 Constructing wrapper function "implicit_5Dz"... 2021-07-28T22:59:02,804 phi = implicit_5Dz(phi,xx,yy,zz,aa,bb,nu3,m31,m32,m34,m35,gamma3,h3,dt,use_delj_trick) 2021-07-28T22:59:02,804 Constructing wrapper function "implicit_5Da"... 2021-07-28T22:59:02,804 phi = implicit_5Da(phi,xx,yy,zz,aa,bb,nu4,m41,m42,m43,m45,gamma4,h4,dt,use_delj_trick) 2021-07-28T22:59:02,804 Constructing wrapper function "implicit_5Db"... 2021-07-28T22:59:02,804 phi = implicit_5Db(phi,xx,yy,zz,aa,bb,nu5,m51,m52,m53,m54,gamma5,h5,dt,use_delj_trick) 2021-07-28T22:59:02,804 Wrote C/API module "integration_c" to file "build/src.linux-armv7l-3.9/dadi/integration_cmodule.c" 2021-07-28T22:59:02,804 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.c' to sources. 2021-07-28T22:59:02,804 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi' to include_dirs. 2021-07-28T22:59:02,805 building extension "dadi.DFE.PDFs_c" sources 2021-07-28T22:59:02,805 creating build/src.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:02,805 f2py options: [] 2021-07-28T22:59:02,805 f2py: dadi/DFE/PDFs.pyf 2021-07-28T22:59:02,825 appenddecl: "intent" not implemented. 2021-07-28T22:59:02,917 Reading fortran codes... 2021-07-28T22:59:02,917 Reading file 'dadi/DFE/PDFs.pyf' (format:free) 2021-07-28T22:59:02,917 Line #5 in dadi/DFE/PDFs.pyf:" intent(c) " 2021-07-28T22:59:02,917 All arguments will have attribute intent(c) 2021-07-28T22:59:02,917 Line #16 in dadi/DFE/PDFs.pyf:" intent(c) " 2021-07-28T22:59:02,918 All arguments will have attribute intent(c) 2021-07-28T22:59:02,918 Line #22 in dadi/DFE/PDFs.pyf:" intent(c) " 2021-07-28T22:59:02,918 All arguments will have attribute intent(c) 2021-07-28T22:59:02,918 Post-processing... 2021-07-28T22:59:02,918 Block: PDFs_c 2021-07-28T22:59:02,918 Block: biv_lognormal 2021-07-28T22:59:02,918 Block: gamma_func 2021-07-28T22:59:02,918 Block: biv_ind_gamma 2021-07-28T22:59:02,919 Post-processing (stage 2)... 2021-07-28T22:59:02,919 Building modules... 2021-07-28T22:59:02,919 Building module "PDFs_c"... 2021-07-28T22:59:02,919 Constructing wrapper function "biv_lognormal"... 2021-07-28T22:59:02,919 output = biv_lognormal(xx,yy,params) 2021-07-28T22:59:02,919 Constructing wrapper function "gamma_func"... 2021-07-28T22:59:02,920 y = gamma_func(z) 2021-07-28T22:59:02,920 Constructing wrapper function "biv_ind_gamma"... 2021-07-28T22:59:02,921 output = biv_ind_gamma(xx,yy,params) 2021-07-28T22:59:02,921 Wrote C/API module "PDFs_c" to file "build/src.linux-armv7l-3.9/dadi/DFE/PDFs_cmodule.c" 2021-07-28T22:59:02,921 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.c' to sources. 2021-07-28T22:59:02,921 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE' to include_dirs. 2021-07-28T22:59:02,921 creating build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:02,921 copying /usr/local/lib/python3.9/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:02,922 copying /usr/local/lib/python3.9/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:02,924 build_src: building npy-pkg config files 2021-07-28T22:59:02,926 creating /tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info 2021-07-28T22:59:02,926 writing /tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/PKG-INFO 2021-07-28T22:59:02,929 writing dependency_links to /tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/dependency_links.txt 2021-07-28T22:59:02,931 writing requirements to /tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/requires.txt 2021-07-28T22:59:02,932 writing top-level names to /tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/top_level.txt 2021-07-28T22:59:02,934 writing manifest file '/tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/SOURCES.txt' 2021-07-28T22:59:02,955 reading manifest file '/tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/SOURCES.txt' 2021-07-28T22:59:02,957 reading manifest template 'MANIFEST.in' 2021-07-28T22:59:03,043 warning: no files found matching 'manual.pdf' under directory 'doc' 2021-07-28T22:59:03,044 warning: no files found matching '*.tex' under directory 'doc' 2021-07-28T22:59:03,044 warning: no files found matching '*.bib' under directory 'doc' 2021-07-28T22:59:03,156 warning: no previously-included files matching '*.msout' found anywhere in distribution 2021-07-28T22:59:03,157 warning: no previously-included files matching '*.swp' found anywhere in distribution 2021-07-28T22:59:03,158 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-07-28T22:59:03,159 warning: no previously-included files matching 'seedms' found anywhere in distribution 2021-07-28T22:59:03,160 warning: no previously-included files matching '*.png' found anywhere in distribution 2021-07-28T22:59:03,161 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2021-07-28T22:59:03,162 warning: no previously-included files matching '*.npz' found anywhere in distribution 2021-07-28T22:59:03,163 warning: no previously-included files matching '*.so' found anywhere in distribution 2021-07-28T22:59:03,163 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2021-07-28T22:59:03,164 adding license file 'LICENSE.txt' 2021-07-28T22:59:03,174 writing manifest file '/tmp/pip-pip-egg-info-749cvi5g/dadi.egg-info/SOURCES.txt' 2021-07-28T22:59:03,306 Source in /tmp/pip-wheel-ompkar49/dadi_7f789457b20d487792cf054c6644bc60 has version 2.1.1, which satisfies requirement dadi==2.1.1 from https://files.pythonhosted.org/packages/ce/ab/d47b4d850b6974c0d1352547c8962facd2550225ddf2aa7aa6d96d73ec8d/dadi-2.1.1.tar.gz#sha256=d1d69568610ddf2f4283917825042c1ceafd4f23bcd06c628eef170bdb5271a2 2021-07-28T22:59:03,307 Removed dadi==2.1.1 from https://files.pythonhosted.org/packages/ce/ab/d47b4d850b6974c0d1352547c8962facd2550225ddf2aa7aa6d96d73ec8d/dadi-2.1.1.tar.gz#sha256=d1d69568610ddf2f4283917825042c1ceafd4f23bcd06c628eef170bdb5271a2 from build tracker '/tmp/pip-req-tracker-6stz2d4q' 2021-07-28T22:59:03,311 Created temporary directory: /tmp/pip-unpack-c0vckmji 2021-07-28T22:59:03,312 Building wheels for collected packages: dadi 2021-07-28T22:59:03,316 Created temporary directory: /tmp/pip-wheel-g_4l8f7i 2021-07-28T22:59:03,317 Building wheel for dadi (setup.py): started 2021-07-28T22:59:03,317 Destination directory: /tmp/pip-wheel-g_4l8f7i 2021-07-28T22:59:03,317 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ompkar49/dadi_7f789457b20d487792cf054c6644bc60/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ompkar49/dadi_7f789457b20d487792cf054c6644bc60/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-g_4l8f7i 2021-07-28T22:59:04,668 running bdist_wheel 2021-07-28T22:59:04,669 running build 2021-07-28T22:59:04,669 running config_cc 2021-07-28T22:59:04,669 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2021-07-28T22:59:04,670 running config_fc 2021-07-28T22:59:04,671 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2021-07-28T22:59:04,671 running build_src 2021-07-28T22:59:04,671 build_src 2021-07-28T22:59:04,671 building extension "dadi.tridiag" sources 2021-07-28T22:59:04,672 f2py options: [] 2021-07-28T22:59:04,672 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.c' to sources. 2021-07-28T22:59:04,672 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi' to include_dirs. 2021-07-28T22:59:04,768 building extension "dadi.integration_c" sources 2021-07-28T22:59:04,769 f2py options: [] 2021-07-28T22:59:04,770 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.c' to sources. 2021-07-28T22:59:04,770 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi' to include_dirs. 2021-07-28T22:59:04,770 building extension "dadi.DFE.PDFs_c" sources 2021-07-28T22:59:04,771 f2py options: [] 2021-07-28T22:59:04,771 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.c' to sources. 2021-07-28T22:59:04,771 adding 'build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE' to include_dirs. 2021-07-28T22:59:04,771 build_src: building npy-pkg config files 2021-07-28T22:59:04,772 running build_py 2021-07-28T22:59:04,778 creating build/lib.linux-armv7l-3.9 2021-07-28T22:59:04,778 creating build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,779 copying dadi/Numerics.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,783 copying dadi/NLopt_mod.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,785 copying dadi/Demographics2D.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,788 copying dadi/Plotting.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,791 copying dadi/Integration.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,794 copying dadi/__init__.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,796 copying dadi/Godambe.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,799 copying dadi/Demographics1D.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,801 copying dadi/Inference.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,806 copying dadi/Spectrum_mod.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,812 copying dadi/Misc.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,816 copying dadi/PhiManip.py -> build/lib.linux-armv7l-3.9/dadi 2021-07-28T22:59:04,821 creating build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,822 copying dadi/Triallele/TriSpectrum_mod.py -> build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,826 copying dadi/Triallele/demographics.py -> build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,829 copying dadi/Triallele/__init__.py -> build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,831 copying dadi/Triallele/plotting.py -> build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,834 copying dadi/Triallele/numerics.py -> build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,837 copying dadi/Triallele/integration.py -> build/lib.linux-armv7l-3.9/dadi/Triallele 2021-07-28T22:59:04,840 creating build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,841 copying dadi/TwoLocus/TLSpectrum_mod.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,844 copying dadi/TwoLocus/demographics.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,846 copying dadi/TwoLocus/__init__.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,848 copying dadi/TwoLocus/plotting.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,851 copying dadi/TwoLocus/numerics.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,856 copying dadi/TwoLocus/integration.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,859 copying dadi/TwoLocus/inference.py -> build/lib.linux-armv7l-3.9/dadi/TwoLocus 2021-07-28T22:59:04,863 creating build/lib.linux-armv7l-3.9/dadi/cuda 2021-07-28T22:59:04,864 copying dadi/cuda/cusparse.py -> build/lib.linux-armv7l-3.9/dadi/cuda 2021-07-28T22:59:04,867 copying dadi/cuda/Integration.py -> build/lib.linux-armv7l-3.9/dadi/cuda 2021-07-28T22:59:04,872 copying dadi/cuda/__init__.py -> build/lib.linux-armv7l-3.9/dadi/cuda 2021-07-28T22:59:04,874 copying dadi/cuda/kernels.py -> build/lib.linux-armv7l-3.9/dadi/cuda 2021-07-28T22:59:04,876 creating build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,877 copying dadi/DFE/Cache2D_mod.py -> build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,881 copying dadi/DFE/DemogSelModels.py -> build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,884 copying dadi/DFE/Plotting.py -> build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,887 copying dadi/DFE/__init__.py -> build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,890 copying dadi/DFE/Cache1D_mod.py -> build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,892 copying dadi/DFE/PDFs.py -> build/lib.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:04,895 copying dadi/cuda/kernels.cu -> build/lib.linux-armv7l-3.9/dadi/cuda 2021-07-28T22:59:04,901 running build_ext 2021-07-28T22:59:04,909 customize UnixCCompiler 2021-07-28T22:59:04,911 customize UnixCCompiler using build_ext 2021-07-28T22:59:05,025 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=native) 2021-07-28T22:59:05,025 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,026 creating /tmp/tmpt1j68d4h/usr 2021-07-28T22:59:05,027 creating /tmp/tmpt1j68d4h/usr/local 2021-07-28T22:59:05,028 creating /tmp/tmpt1j68d4h/usr/local/lib 2021-07-28T22:59:05,028 creating /tmp/tmpt1j68d4h/usr/local/lib/python3.9 2021-07-28T22:59:05,029 creating /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages 2021-07-28T22:59:05,030 creating /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy 2021-07-28T22:59:05,031 creating /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy/distutils 2021-07-28T22:59:05,033 creating /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy/distutils/checks 2021-07-28T22:59:05,034 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,034 extra options: '-march=native' 2021-07-28T22:59:05,130 CCompilerOpt.cc_test_flags[1008] : testing flags (-O3) 2021-07-28T22:59:05,131 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,131 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,131 extra options: '-O3' 2021-07-28T22:59:05,220 CCompilerOpt.cc_test_flags[1008] : testing flags (-Werror) 2021-07-28T22:59:05,221 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,221 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,221 extra options: '-Werror' 2021-07-28T22:59:05,314 CCompilerOpt.__init__[1696] : check requested baseline 2021-07-28T22:59:05,322 CCompilerOpt.__init__[1705] : check requested dispatch-able features 2021-07-28T22:59:05,331 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon) 2021-07-28T22:59:05,331 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,332 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,332 extra options: '-mfpu=neon' 2021-07-28T22:59:05,422 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2021-07-28T22:59:05,422 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,423 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,423 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee' 2021-07-28T22:59:05,591 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-vfpv4) 2021-07-28T22:59:05,592 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,592 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,592 extra options: '-mfpu=neon-vfpv4' 2021-07-28T22:59:05,684 CCompilerOpt.feature_test[1461] : testing feature 'NEON_VFPV4' with flags (-mfp16-format=ieee -mfpu=neon-vfpv4) 2021-07-28T22:59:05,685 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:05,685 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:05,685 extra options: '-mfp16-format=ieee -mfpu=neon-vfpv4 -Werror' 2021-07-28T22:59:06,091 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp-armv8 -march=armv8-a+simd) 2021-07-28T22:59:06,092 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:06,092 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:06,092 extra options: '-mfpu=neon-fp-armv8 -march=armv8-a+simd' 2021-07-28T22:59:06,189 CCompilerOpt.feature_test[1461] : testing feature 'ASIMD' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd) 2021-07-28T22:59:06,189 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:06,190 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:06,190 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd -Werror' 2021-07-28T22:59:06,631 CCompilerOpt.feature_test[1461] : testing feature 'NEON' with flags (-mfpu=neon) 2021-07-28T22:59:06,632 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:06,632 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:06,632 extra options: '-mfpu=neon -Werror' 2021-07-28T22:59:07,019 CCompilerOpt.feature_test[1461] : testing feature 'NEON_FP16' with flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2021-07-28T22:59:07,020 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:07,021 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:07,021 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee -Werror' 2021-07-28T22:59:07,432 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16) 2021-07-28T22:59:07,432 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:07,433 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:07,433 extra options: '-march=armv8.2-a+fp16' 2021-07-28T22:59:07,527 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDHP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16) 2021-07-28T22:59:07,528 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:07,528 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:07,529 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16 -Werror' 2021-07-28T22:59:07,985 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16fml) 2021-07-28T22:59:07,986 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:07,986 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:07,986 extra options: '-march=armv8.2-a+fp16fml' 2021-07-28T22:59:08,085 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDFHM' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml) 2021-07-28T22:59:08,086 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:08,087 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:08,087 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror' 2021-07-28T22:59:08,519 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c -o /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.o -MMD -MF /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror) failed with exit status 1 output -> 2021-07-28T22:59:08,519 /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c: In function ‘main’: 2021-07-28T22:59:08,520 /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: implicit declaration of function ‘vfmlal_low_u32’; did you mean ‘vfmlal_low_f16’? [-Werror=implicit-function-declaration] 2021-07-28T22:59:08,520 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2021-07-28T22:59:08,520 | ^~~~~~~~~~~~~~ 2021-07-28T22:59:08,520 | vfmlal_low_f16 2021-07-28T22:59:08,520 /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: incompatible type for argument 1 of ‘vget_lane_f32’ 2021-07-28T22:59:08,520 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2021-07-28T22:59:08,521 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-28T22:59:08,521 | | 2021-07-28T22:59:08,521 | int 2021-07-28T22:59:08,521 In file included from /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c:4: 2021-07-28T22:59:08,521 /usr/lib/gcc/arm-linux-gnueabihf/10/include/arm_neon.h:6171:28: note: expected ‘float32x2_t’ but argument is of type ‘int’ 2021-07-28T22:59:08,521 6171 | vget_lane_f32 (float32x2_t __a, const int __b) 2021-07-28T22:59:08,521 | ~~~~~~~~~~~~^~~ 2021-07-28T22:59:08,522 /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: implicit declaration of function ‘vfmlslq_high_u32’; did you mean ‘vfmlslq_high_f16’? [-Werror=implicit-function-declaration] 2021-07-28T22:59:08,522 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2021-07-28T22:59:08,522 | ^~~~~~~~~~~~~~~~ 2021-07-28T22:59:08,522 | vfmlslq_high_f16 2021-07-28T22:59:08,522 /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: incompatible type for argument 1 of ‘vgetq_lane_f32’ 2021-07-28T22:59:08,522 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2021-07-28T22:59:08,523 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-28T22:59:08,523 | | 2021-07-28T22:59:08,523 | int 2021-07-28T22:59:08,523 In file included from /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimdfhm.c:4: 2021-07-28T22:59:08,523 /usr/lib/gcc/arm-linux-gnueabihf/10/include/arm_neon.h:6269:29: note: expected ‘float32x4_t’ but argument is of type ‘int’ 2021-07-28T22:59:08,523 6269 | vgetq_lane_f32 (float32x4_t __a, const int __b) 2021-07-28T22:59:08,523 | ~~~~~~~~~~~~^~~ 2021-07-28T22:59:08,524 cc1: all warnings being treated as errors 2021-07-28T22:59:08,527 CCompilerOpt.feature_test[1477] : testing failed 2021-07-28T22:59:08,534 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+dotprod) 2021-07-28T22:59:08,534 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:08,534 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:08,534 extra options: '-march=armv8.2-a+dotprod' 2021-07-28T22:59:08,624 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDDP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod) 2021-07-28T22:59:08,624 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:08,625 compile options: '-I/usr/include/python3.9 -c' 2021-07-28T22:59:08,625 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror' 2021-07-28T22:59:09,062 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimddp.c -o /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimddp.o -MMD -MF /tmp/tmpt1j68d4h/usr/local/lib/python3.9/dist-packages/numpy/distutils/checks/cpu_asimddp.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror) failed with exit status 1 output -> 2021-07-28T22:59:09,062 /tmp/ccg7npgC.s: Assembler messages: 2021-07-28T22:59:09,063 /tmp/ccg7npgC.s:79: Error: selected processor does not support `vudot.u8 q8,q9,q10' in ARM mode 2021-07-28T22:59:09,069 CCompilerOpt.feature_test[1477] : testing failed 2021-07-28T22:59:09,075 CCompilerOpt.__init__[1721] : initialize targets groups 2021-07-28T22:59:09,081 CCompilerOpt.__init__[1723] : parse target group simd_test 2021-07-28T22:59:09,087 CCompilerOpt._parse_target_tokens[1934] : skip targets (AVX512F SSE42 VSX3 XOP VSX2 SSE2 (FMA3 AVX2) AVX512_SKX FMA4 VSX) not part of baseline or dispatch-able features 2021-07-28T22:59:09,093 CCompilerOpt.generate_dispatch_header[2267] : generate CPU dispatch header: (build/src.linux-armv7l-3.9/numpy/distutils/include/npy_cpu_dispatch_config.h) 2021-07-28T22:59:09,098 CCompilerOpt.generate_dispatch_header[2276] : dispatch header dir build/src.linux-armv7l-3.9/numpy/distutils/include does not exist, creating it 2021-07-28T22:59:09,105 building 'dadi.tridiag' extension 2021-07-28T22:59:09,106 compiling C sources 2021-07-28T22:59:09,106 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:09,107 creating build/temp.linux-armv7l-3.9/build 2021-07-28T22:59:09,107 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-28T22:59:09,108 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi 2021-07-28T22:59:09,109 creating build/temp.linux-armv7l-3.9/dadi 2021-07-28T22:59:09,110 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build 2021-07-28T22:59:09,110 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9 2021-07-28T22:59:09,111 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi 2021-07-28T22:59:09,111 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-28T22:59:09,133 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/dadi/tridiagmodule.c 2021-07-28T22:59:09,134 arm-linux-gnueabihf-gcc: dadi/tridiag.c 2021-07-28T22:59:09,141 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.c 2021-07-28T22:59:09,589 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T22:59:09,589 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T22:59:09,589 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T22:59:09,590 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.h:13, 2021-07-28T22:59:09,590 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.c:2: 2021-07-28T22:59:09,590 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T22:59:09,590 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T22:59:09,590 | ^~~~~~~ 2021-07-28T22:59:09,590 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T22:59:09,591 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T22:59:09,591 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T22:59:09,591 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.h:13, 2021-07-28T22:59:09,591 from build/src.linux-armv7l-3.9/dadi/tridiagmodule.c:16: 2021-07-28T22:59:09,591 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T22:59:09,591 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T22:59:09,591 | ^~~~~~~ 2021-07-28T22:59:09,645 build/src.linux-armv7l-3.9/dadi/tridiagmodule.c:102:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2021-07-28T22:59:09,645 102 | static int f2py_size(PyArrayObject* var, ...) 2021-07-28T22:59:09,645 | ^~~~~~~~~ 2021-07-28T22:59:10,774 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/tridiagmodule.o build/temp.linux-armv7l-3.9/dadi/tridiag.o build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.o -o build/lib.linux-armv7l-3.9/dadi/tridiag.cpython-39-arm-linux-gnueabihf.so 2021-07-28T22:59:10,910 building 'dadi.integration_c' extension 2021-07-28T22:59:10,910 compiling C sources 2021-07-28T22:59:10,911 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:10,912 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-28T22:59:10,915 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/dadi/integration_cmodule.c 2021-07-28T22:59:10,916 arm-linux-gnueabihf-gcc: dadi/integration2D.c 2021-07-28T22:59:10,916 arm-linux-gnueabihf-gcc: dadi/integration1D.carm-linux-gnueabihf-gcc: dadi/integration3D.c 2021-07-28T22:59:11,241 arm-linux-gnueabihf-gcc: dadi/integration4D.c 2021-07-28T22:59:11,495 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T22:59:11,496 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T22:59:11,496 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T22:59:11,497 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.h:13, 2021-07-28T22:59:11,498 from build/src.linux-armv7l-3.9/dadi/integration_cmodule.c:16: 2021-07-28T22:59:11,498 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T22:59:11,498 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T22:59:11,498 | ^~~~~~~ 2021-07-28T22:59:11,556 arm-linux-gnueabihf-gcc: dadi/integration5D.c 2021-07-28T22:59:11,692 build/src.linux-armv7l-3.9/dadi/integration_cmodule.c:102:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2021-07-28T22:59:11,693 102 | static int f2py_size(PyArrayObject* var, ...) 2021-07-28T22:59:11,693 | ^~~~~~~~~ 2021-07-28T22:59:11,887 arm-linux-gnueabihf-gcc: dadi/integration_shared.c 2021-07-28T22:59:15,152 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/integration_cmodule.o build/temp.linux-armv7l-3.9/dadi/integration1D.o build/temp.linux-armv7l-3.9/dadi/integration2D.o build/temp.linux-armv7l-3.9/dadi/integration3D.o build/temp.linux-armv7l-3.9/dadi/integration4D.o build/temp.linux-armv7l-3.9/dadi/integration5D.o build/temp.linux-armv7l-3.9/dadi/integration_shared.o build/temp.linux-armv7l-3.9/dadi/tridiag.o build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/fortranobject.o -o build/lib.linux-armv7l-3.9/dadi/integration_c.cpython-39-arm-linux-gnueabihf.so 2021-07-28T22:59:15,423 building 'dadi.DFE.PDFs_c' extension 2021-07-28T22:59:15,423 compiling C sources 2021-07-28T22:59:15,424 C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2021-07-28T22:59:15,424 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:15,425 creating build/temp.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:15,426 creating build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE 2021-07-28T22:59:15,427 compile options: '-Ibuild/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ibuild/src.linux-armv7l-3.9/numpy/distutils/include -I/usr/include/python3.9 -c' 2021-07-28T22:59:15,433 arm-linux-gnueabihf-gcc: dadi/DFE/PDFs.carm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/dadi/DFE/PDFs_cmodule.c 2021-07-28T22:59:15,449 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.c 2021-07-28T22:59:15,573 dadi/DFE/PDFs.c:4: warning: "M_PI" redefined 2021-07-28T22:59:15,574 4 | #define M_PI 3.14159265358979323846264338327950288 2021-07-28T22:59:15,574 | 2021-07-28T22:59:15,574 In file included from dadi/DFE/PDFs.c:2: 2021-07-28T22:59:15,574 /usr/include/math.h:1070: note: this is the location of the previous definition 2021-07-28T22:59:15,574 1070 | # define M_PI 3.14159265358979323846 /* pi */ 2021-07-28T22:59:15,575 | 2021-07-28T22:59:15,863 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T22:59:15,863 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T22:59:15,864 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T22:59:15,864 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.h:13, 2021-07-28T22:59:15,864 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.c:2: 2021-07-28T22:59:15,864 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T22:59:15,864 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T22:59:15,864 | ^~~~~~~ 2021-07-28T22:59:15,864 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T22:59:15,865 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T22:59:15,865 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T22:59:15,865 from build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.h:13, 2021-07-28T22:59:15,865 from build/src.linux-armv7l-3.9/dadi/DFE/PDFs_cmodule.c:16: 2021-07-28T22:59:15,865 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T22:59:15,865 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T22:59:15,865 | ^~~~~~~ 2021-07-28T22:59:15,918 build/src.linux-armv7l-3.9/dadi/DFE/PDFs_cmodule.c:102:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2021-07-28T22:59:15,919 102 | static int f2py_size(PyArrayObject* var, ...) 2021-07-28T22:59:15,919 | ^~~~~~~~~ 2021-07-28T22:59:17,049 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/PDFs_cmodule.o build/temp.linux-armv7l-3.9/dadi/DFE/PDFs.o build/temp.linux-armv7l-3.9/build/src.linux-armv7l-3.9/build/src.linux-armv7l-3.9/dadi/DFE/fortranobject.o -o build/lib.linux-armv7l-3.9/dadi/DFE/PDFs_c.cpython-39-arm-linux-gnueabihf.so 2021-07-28T22:59:17,189 installing to build/bdist.linux-armv7l/wheel 2021-07-28T22:59:17,190 running install 2021-07-28T22:59:17,190 running install_lib 2021-07-28T22:59:17,194 creating build/bdist.linux-armv7l 2021-07-28T22:59:17,195 creating build/bdist.linux-armv7l/wheel 2021-07-28T22:59:17,196 creating build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,198 creating build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,199 copying build/lib.linux-armv7l-3.9/dadi/Triallele/TriSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,202 copying build/lib.linux-armv7l-3.9/dadi/Triallele/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,204 copying build/lib.linux-armv7l-3.9/dadi/Triallele/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,206 copying build/lib.linux-armv7l-3.9/dadi/Triallele/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,208 copying build/lib.linux-armv7l-3.9/dadi/Triallele/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,211 copying build/lib.linux-armv7l-3.9/dadi/Triallele/integration.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2021-07-28T22:59:17,214 creating build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,215 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/TLSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,218 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,220 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,222 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,225 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,229 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/integration.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,232 copying build/lib.linux-armv7l-3.9/dadi/TwoLocus/inference.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2021-07-28T22:59:17,235 copying build/lib.linux-armv7l-3.9/dadi/Numerics.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,239 creating build/bdist.linux-armv7l/wheel/dadi/cuda 2021-07-28T22:59:17,240 copying build/lib.linux-armv7l-3.9/dadi/cuda/cusparse.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2021-07-28T22:59:17,243 copying build/lib.linux-armv7l-3.9/dadi/cuda/Integration.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2021-07-28T22:59:17,247 copying build/lib.linux-armv7l-3.9/dadi/cuda/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2021-07-28T22:59:17,249 copying build/lib.linux-armv7l-3.9/dadi/cuda/kernels.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2021-07-28T22:59:17,251 copying build/lib.linux-armv7l-3.9/dadi/cuda/kernels.cu -> build/bdist.linux-armv7l/wheel/dadi/cuda 2021-07-28T22:59:17,253 copying build/lib.linux-armv7l-3.9/dadi/NLopt_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,255 copying build/lib.linux-armv7l-3.9/dadi/Demographics2D.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,258 copying build/lib.linux-armv7l-3.9/dadi/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,261 copying build/lib.linux-armv7l-3.9/dadi/integration_c.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,274 copying build/lib.linux-armv7l-3.9/dadi/Integration.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,278 copying build/lib.linux-armv7l-3.9/dadi/__init__.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,280 copying build/lib.linux-armv7l-3.9/dadi/Godambe.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,283 copying build/lib.linux-armv7l-3.9/dadi/Demographics1D.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,285 copying build/lib.linux-armv7l-3.9/dadi/Inference.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,289 copying build/lib.linux-armv7l-3.9/dadi/tridiag.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,296 copying build/lib.linux-armv7l-3.9/dadi/Spectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,303 copying build/lib.linux-armv7l-3.9/dadi/Misc.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,307 copying build/lib.linux-armv7l-3.9/dadi/PhiManip.py -> build/bdist.linux-armv7l/wheel/dadi 2021-07-28T22:59:17,311 creating build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,312 copying build/lib.linux-armv7l-3.9/dadi/DFE/Cache2D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,315 copying build/lib.linux-armv7l-3.9/dadi/DFE/DemogSelModels.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,317 copying build/lib.linux-armv7l-3.9/dadi/DFE/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,320 copying build/lib.linux-armv7l-3.9/dadi/DFE/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,321 copying build/lib.linux-armv7l-3.9/dadi/DFE/Cache1D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,324 copying build/lib.linux-armv7l-3.9/dadi/DFE/PDFs_c.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,329 copying build/lib.linux-armv7l-3.9/dadi/DFE/PDFs.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2021-07-28T22:59:17,331 running install_egg_info 2021-07-28T22:59:17,335 running egg_info 2021-07-28T22:59:17,336 writing dadi.egg-info/PKG-INFO 2021-07-28T22:59:17,338 writing dependency_links to dadi.egg-info/dependency_links.txt 2021-07-28T22:59:17,340 writing requirements to dadi.egg-info/requires.txt 2021-07-28T22:59:17,341 writing top-level names to dadi.egg-info/top_level.txt 2021-07-28T22:59:17,361 reading manifest file 'dadi.egg-info/SOURCES.txt' 2021-07-28T22:59:17,393 reading manifest template 'MANIFEST.in' 2021-07-28T22:59:17,463 warning: no files found matching 'manual.pdf' under directory 'doc' 2021-07-28T22:59:17,463 warning: no files found matching '*.tex' under directory 'doc' 2021-07-28T22:59:17,464 warning: no files found matching '*.bib' under directory 'doc' 2021-07-28T22:59:17,558 warning: no previously-included files matching '*.msout' found anywhere in distribution 2021-07-28T22:59:17,560 warning: no previously-included files matching '*.swp' found anywhere in distribution 2021-07-28T22:59:17,561 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-07-28T22:59:17,562 warning: no previously-included files matching 'seedms' found anywhere in distribution 2021-07-28T22:59:17,564 warning: no previously-included files matching '*.png' found anywhere in distribution 2021-07-28T22:59:17,565 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2021-07-28T22:59:17,566 warning: no previously-included files matching '*.npz' found anywhere in distribution 2021-07-28T22:59:17,568 warning: no previously-included files matching '*.so' found anywhere in distribution 2021-07-28T22:59:17,569 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2021-07-28T22:59:17,569 adding license file 'LICENSE.txt' 2021-07-28T22:59:17,582 writing manifest file 'dadi.egg-info/SOURCES.txt' 2021-07-28T22:59:17,585 Copying dadi.egg-info to build/bdist.linux-armv7l/wheel/dadi-2.1.1-py3.9.egg-info 2021-07-28T22:59:17,595 running install_scripts 2021-07-28T22:59:17,595 running install_clib 2021-07-28T22:59:17,596 customize UnixCCompiler 2021-07-28T22:59:17,615 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2021-07-28T22:59:17,620 creating build/bdist.linux-armv7l/wheel/dadi-2.1.1.dist-info/WHEEL 2021-07-28T22:59:17,622 creating '/tmp/pip-wheel-g_4l8f7i/dadi-2.1.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-28T22:59:17,625 adding 'dadi/Demographics1D.py' 2021-07-28T22:59:17,627 adding 'dadi/Demographics2D.py' 2021-07-28T22:59:17,630 adding 'dadi/Godambe.py' 2021-07-28T22:59:17,636 adding 'dadi/Inference.py' 2021-07-28T22:59:17,642 adding 'dadi/Integration.py' 2021-07-28T22:59:17,647 adding 'dadi/Misc.py' 2021-07-28T22:59:17,649 adding 'dadi/NLopt_mod.py' 2021-07-28T22:59:17,653 adding 'dadi/Numerics.py' 2021-07-28T22:59:17,657 adding 'dadi/PhiManip.py' 2021-07-28T22:59:17,661 adding 'dadi/Plotting.py' 2021-07-28T22:59:17,672 adding 'dadi/Spectrum_mod.py' 2021-07-28T22:59:17,674 adding 'dadi/__init__.py' 2021-07-28T22:59:17,750 adding 'dadi/integration_c.cpython-39-arm-linux-gnueabihf.so' 2021-07-28T22:59:17,777 adding 'dadi/tridiag.cpython-39-arm-linux-gnueabihf.so' 2021-07-28T22:59:17,781 adding 'dadi/DFE/Cache1D_mod.py' 2021-07-28T22:59:17,784 adding 'dadi/DFE/Cache2D_mod.py' 2021-07-28T22:59:17,785 adding 'dadi/DFE/DemogSelModels.py' 2021-07-28T22:59:17,787 adding 'dadi/DFE/PDFs.py' 2021-07-28T22:59:17,811 adding 'dadi/DFE/PDFs_c.cpython-39-arm-linux-gnueabihf.so' 2021-07-28T22:59:17,814 adding 'dadi/DFE/Plotting.py' 2021-07-28T22:59:17,815 adding 'dadi/DFE/__init__.py' 2021-07-28T22:59:17,818 adding 'dadi/Triallele/TriSpectrum_mod.py' 2021-07-28T22:59:17,819 adding 'dadi/Triallele/__init__.py' 2021-07-28T22:59:17,821 adding 'dadi/Triallele/demographics.py' 2021-07-28T22:59:17,823 adding 'dadi/Triallele/integration.py' 2021-07-28T22:59:17,826 adding 'dadi/Triallele/numerics.py' 2021-07-28T22:59:17,828 adding 'dadi/Triallele/plotting.py' 2021-07-28T22:59:17,830 adding 'dadi/TwoLocus/TLSpectrum_mod.py' 2021-07-28T22:59:17,832 adding 'dadi/TwoLocus/__init__.py' 2021-07-28T22:59:17,833 adding 'dadi/TwoLocus/demographics.py' 2021-07-28T22:59:17,835 adding 'dadi/TwoLocus/inference.py' 2021-07-28T22:59:17,837 adding 'dadi/TwoLocus/integration.py' 2021-07-28T22:59:17,844 adding 'dadi/TwoLocus/numerics.py' 2021-07-28T22:59:17,847 adding 'dadi/TwoLocus/plotting.py' 2021-07-28T22:59:17,851 adding 'dadi/cuda/Integration.py' 2021-07-28T22:59:17,852 adding 'dadi/cuda/__init__.py' 2021-07-28T22:59:17,855 adding 'dadi/cuda/cusparse.py' 2021-07-28T22:59:17,856 adding 'dadi/cuda/kernels.cu' 2021-07-28T22:59:17,858 adding 'dadi/cuda/kernels.py' 2021-07-28T22:59:17,860 adding 'dadi-2.1.1.dist-info/LICENSE.txt' 2021-07-28T22:59:17,861 adding 'dadi-2.1.1.dist-info/METADATA' 2021-07-28T22:59:17,862 adding 'dadi-2.1.1.dist-info/WHEEL' 2021-07-28T22:59:17,863 adding 'dadi-2.1.1.dist-info/top_level.txt' 2021-07-28T22:59:17,864 adding 'dadi-2.1.1.dist-info/RECORD' 2021-07-28T22:59:17,873 removing build/bdist.linux-armv7l/wheel 2021-07-28T22:59:17,889 ########### EXT COMPILER OPTIMIZATION ########### 2021-07-28T22:59:17,889 Platform : 2021-07-28T22:59:17,889 Architecture: armhf 2021-07-28T22:59:17,889 Compiler : gcc 2021-07-28T22:59:17,889 CPU baseline : 2021-07-28T22:59:17,889 Requested : 'min' 2021-07-28T22:59:17,890 Enabled : none 2021-07-28T22:59:17,890 Flags : none 2021-07-28T22:59:17,890 Extra checks: none 2021-07-28T22:59:17,890 CPU dispatch : 2021-07-28T22:59:17,890 Requested : 'max -xop -fma4' 2021-07-28T22:59:17,890 Enabled : NEON NEON_FP16 NEON_VFPV4 ASIMD ASIMDHP 2021-07-28T22:59:17,890 Generated : none 2021-07-28T22:59:17,891 CCompilerOpt.cache_flush[804] : write cache to path -> /tmp/pip-wheel-ompkar49/dadi_7f789457b20d487792cf054c6644bc60/build/temp.linux-armv7l-3.9/ccompiler_opt_cache_ext.py 2021-07-28T22:59:18,048 Building wheel for dadi (setup.py): finished with status 'done' 2021-07-28T22:59:18,055 Created wheel for dadi: filename=dadi-2.1.1-cp39-cp39-linux_armv7l.whl size=407257 sha256=3426c196c9709856b9deb9326f11a7cec3c73fb325280a241511468943fabac8 2021-07-28T22:59:18,056 Stored in directory: /tmp/pip-ephem-wheel-cache-4h8fwg4y/wheels/6b/cb/18/e7a4126ba5cdd52ea41ac4c91bb5d3d0c78c6aa65f2035968b 2021-07-28T22:59:18,068 Successfully built dadi 2021-07-28T22:59:18,084 Removed build tracker: '/tmp/pip-req-tracker-6stz2d4q'