2021-07-28T23:37:20,013 Created temporary directory: /tmp/pip-ephem-wheel-cache-47_7duyk 2021-07-28T23:37:20,016 Created temporary directory: /tmp/pip-req-tracker-r5xmr3cs 2021-07-28T23:37:20,016 Initialized build tracking at /tmp/pip-req-tracker-r5xmr3cs 2021-07-28T23:37:20,017 Created build tracker: /tmp/pip-req-tracker-r5xmr3cs 2021-07-28T23:37:20,017 Entered build tracker: /tmp/pip-req-tracker-r5xmr3cs 2021-07-28T23:37:20,017 Created temporary directory: /tmp/pip-wheel-gakxa9le 2021-07-28T23:37:20,052 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-28T23:37:20,053 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-28T23:37:20,053 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-28T23:37:20,053 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-28T23:37:20,054 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-28T23:37:20,056 WARNING: Location '/megalodon/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T23:37:20,057 WARNING: Location 't/megalodon/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T23:37:20,057 WARNING: Location 'm/megalodon/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T23:37:20,057 WARNING: Location 'p/megalodon/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-28T23:37:20,058 1 location(s) to search for versions of megalodon: 2021-07-28T23:37:20,058 * https://pypi.org/simple/megalodon/ 2021-07-28T23:37:20,058 Fetching project page and analyzing links: https://pypi.org/simple/megalodon/ 2021-07-28T23:37:20,059 Getting page https://pypi.org/simple/megalodon/ 2021-07-28T23:37:20,060 Found index url https://pypi.org/simple 2021-07-28T23:37:20,308 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/fe/5f/fc169f4470c2ab9a3d0dcf7b0eba0752a950494eb6587cbe3425724bcbaa/megalodon-1.0.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=de244047d7a7d1f08a86fbed509d20eeed709187f84e765d9b9a4f5359364a30 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,308 Found link https://files.pythonhosted.org/packages/9b/94/e9a546cb3958043d7378b0d1b5eebe01ca3923db3de08a10ef230e27dff5/megalodon-1.0.0.tar.gz#sha256=a547c80eb95763ecf13fed66023953fa8fe6c98082e9e249ef0f859772f01ccc (from https://pypi.org/simple/megalodon/), version: 1.0.0 2021-07-28T23:37:20,308 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/15/da/db7e0d83c7237552d45289530e9418d460c7a994f0d2b6a1735f98f62ecf/megalodon-2.0.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=bcea1352257f402f82787a2494ebc02f35503c15edd739fe8663f1417447be13 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,309 Found link https://files.pythonhosted.org/packages/1d/e0/6a40deaac257dacfb2c31c056b37abd76e8ddfc8e852ea5117cb3d67b220/megalodon-2.0.0.tar.gz#sha256=28deb452ba87cfdf116bcdbc2e6335ab3220d363a7f545594d43c60cf8e9040c (from https://pypi.org/simple/megalodon/), version: 2.0.0 2021-07-28T23:37:20,309 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/33/7c/bfd056d9b7d5a618f61d28fe44d2402a16b6a959f9a30cd13f8dc7046e4c/megalodon-2.1.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=1052edf69302c8d018bdde48d6673c03364255acdfde0aa9938997fee66f7fbe (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,309 Found link https://files.pythonhosted.org/packages/aa/cc/b3c81dc70660c4e043180ea7535b8b42dd8724cddd784dbeb039ff2bf0c5/megalodon-2.1.0.tar.gz#sha256=1e6db96a9d14a1041b435f4cf0fdd19a0809490efd4c2d4dae7eeaa2423db3a3 (from https://pypi.org/simple/megalodon/), version: 2.1.0 2021-07-28T23:37:20,309 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/82/eb/8a50a84306188acf8c4dc1855184d652e6497a11343769b2d6b474a96d66/megalodon-2.2.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d138a85f21444a1105bc8c056b92e44a3866692291d7af3d76f87dcab8f986b1 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,310 Found link https://files.pythonhosted.org/packages/74/a9/32eb1037cb5e427a433a648e02fd0e3e137d8803320858190e7b2fec74a7/megalodon-2.2.0.tar.gz#sha256=0f057644f21ce76ea8b50625e297c9f9449e0710a9423387c4d7da43b4e13115 (from https://pypi.org/simple/megalodon/), version: 2.2.0 2021-07-28T23:37:20,310 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/82/27/2831a1d28162814e76b2e8a11fce724981e8859d1bc01f6466c242c4aca8/megalodon-2.2.1-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=2cad064accda0a6aef3ac728fc3a1bdd4016145eb16cb322b542b0312cdb5cd5 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,310 Found link https://files.pythonhosted.org/packages/af/83/f12260694514be27333adb79165bc3958b59909eb21495b918a98e0e6f07/megalodon-2.2.1.tar.gz#sha256=33f3fdeae806a34fc9a0e2b3cb5b4d5bf7c1822c6eb00f9ed8a3cd2fb1327ef7 (from https://pypi.org/simple/megalodon/), version: 2.2.1 2021-07-28T23:37:20,310 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/23/94/863df7fd77e1944284db39b53c3cc1f70e0f8fcbf6986d2a88e6f4d580e8/megalodon-2.2.2-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=0d097cc1fef40f8687647b5b2762567b845af016da396720bdd831e205ee8a17 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,311 Found link https://files.pythonhosted.org/packages/9e/46/69945645195a2fb592946734e200065f4789a25d58083d8c3abf9892a81f/megalodon-2.2.2.tar.gz#sha256=e4c1e59951187bee9113cbaa34e1b7e1481cd4445e7086e05e2f87ed2fdcff4b (from https://pypi.org/simple/megalodon/), version: 2.2.2 2021-07-28T23:37:20,311 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/45/a6/2823df05db649df59c68dd45cf096fbfbfc329ef1d0f7ebec4f8d9f22aba/megalodon-2.2.3-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=5d0a7ac3aa6682e765b65ccf21287f19adb13136c5bbf1df2261d3977ae8477d (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,311 Found link https://files.pythonhosted.org/packages/4e/ef/da0e43132c1e0eb419591aa7827c4283599e58693d0b62234154b82596ae/megalodon-2.2.3.tar.gz#sha256=15da8761287df96251e08960fbf4bb1d1f2acc35ed8f824923845db78e3e1d90 (from https://pypi.org/simple/megalodon/), version: 2.2.3 2021-07-28T23:37:20,311 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/68/ae/04258dc7767930aa202d1bde4b85ab85d7198e309aeac9dd87022622feb2/megalodon-2.2.4-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=bc8f2941db875a09c831c8f9430fbef8192827ace981eb64f7dd28d3a9ee6351 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,312 Found link https://files.pythonhosted.org/packages/f2/1a/4cbec97bcedb05c100398b752bccc14078a7bb7d72e4c3dd9adf96280818/megalodon-2.2.4.tar.gz#sha256=a882b2a388c82fdcc150de46f9dc10d5253afe7e44e419896ac1c5783b50531c (from https://pypi.org/simple/megalodon/), version: 2.2.4 2021-07-28T23:37:20,312 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/19/dd/f9468b176d7205983acd0815d8e5c8c261befeac8ada2b56b1ecb993bb68/megalodon-2.2.5-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d5997afe79945d93c64b6d7c9e43abec8e8ea6855b46d9310e591d6b80c1a1b4 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,312 Found link https://files.pythonhosted.org/packages/16/ae/a874438ab41e90ab0cef6dd27dacfdafde85d1e53919d16a6cf7179db5a0/megalodon-2.2.5.tar.gz#sha256=2e1d518defaabc15a1e95ace2738823cee1d6394066b4208527bb4d75bcf624a (from https://pypi.org/simple/megalodon/), version: 2.2.5 2021-07-28T23:37:20,312 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/a5/62/9b0b3ea25b343f382552662ebfe57635b614f8a2377ffd5023c211936cc1/megalodon-2.2.6-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=b6c509cd7e3cdf1577a133d1341b21be7ca2532da296b4be037c430f99244357 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,313 Found link https://files.pythonhosted.org/packages/e5/b2/d811ca419757cbba76ddc27bfa2d6737697ff84154452b854ed45bff00cd/megalodon-2.2.6.tar.gz#sha256=771c3a3c75ed77e5ff992ee351d7ae1b9098a9f9b0d5fd802a0dc3a917ebc309 (from https://pypi.org/simple/megalodon/), version: 2.2.6 2021-07-28T23:37:20,313 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/c9/b4/f5d093c9af006cf796dabdbc11c1e35d948f0614ded7d2287c59edf176f5/megalodon-2.2.7-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=39e7f53cf7edc33b9db185ad25d710fbb146f376c9b2a18e040532f3eabf6d22 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,313 Found link https://files.pythonhosted.org/packages/8f/3a/0dddaefaafd13b422c47b29b6eb8244e063cf1913a6c93bb266f81ba28b0/megalodon-2.2.7.tar.gz#sha256=1b94f36b0832e46a357fdeaa1dd69ba8fcc12db323fec92fc82099bec561e953 (from https://pypi.org/simple/megalodon/), version: 2.2.7 2021-07-28T23:37:20,313 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/1c/e2/aac960ece82b3ee2d1bf508bbad89b0322df7ee93867bff61eb08eea7d02/megalodon-2.2.8-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=4476551ac0b3e26f30ffc672b968364a20c70ddcde7aaecf1c35b774c0cb89f8 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,314 Found link https://files.pythonhosted.org/packages/96/ff/fbca07072116bded97faa95b3e612e51699f0f2b0f6bf3f8ceb4d517eb13/megalodon-2.2.8.tar.gz#sha256=19c1cfe3b538f426f7f0a3174350ab9670e7c6e9b7ed2a2567123663349300b1 (from https://pypi.org/simple/megalodon/), version: 2.2.8 2021-07-28T23:37:20,314 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/54/36/c04e7bca80b2e6c219622a5ac59624929bdf393917c6b22afb0b20cab5a2/megalodon-2.2.9-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=2f0d2ec73f279389f8fe9e24996760d63bebdff2911ea1cb478bbd80980ff5f6 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,314 Found link https://files.pythonhosted.org/packages/32/34/06e3789e13ba3a53aee81ad3c8cb68b1e9356530af8525ca0f68869d02eb/megalodon-2.2.9.tar.gz#sha256=355f8e110d34ce615a5a65cdca76b92e44acd6de80ea329c557c966a041a3dcd (from https://pypi.org/simple/megalodon/), version: 2.2.9 2021-07-28T23:37:20,314 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/85/e8/e90f759e0e17e18731d7c22fbf238b09662d54629b9736ff92f98975a6a1/megalodon-2.2.10-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=617674a9a6151b1fa74921f827578105fe8c9df9d8d9c538e244db2849a689da (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,314 Found link https://files.pythonhosted.org/packages/c4/f8/97ed0590b57f2105b63c9141901cc9488fd94d4d0550cf316d9737092701/megalodon-2.2.10.tar.gz#sha256=2b4bbfaec07fed5e6f6083025a34b60d65cdb39ed92d05a5ef9454b8a9e428d5 (from https://pypi.org/simple/megalodon/), version: 2.2.10 2021-07-28T23:37:20,315 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/af/89/c690ee45ac097048cc7738902b9d633c469948e15d2091f203e504183c69/megalodon-2.3.0-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=a996c71f4001995029fd562c27478ded119712869d1a16643482e5d34b2b6c2b (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,315 Found link https://files.pythonhosted.org/packages/a3/ac/c085b61208e30364a2d5aa52bdb9fe26b2e71331384ea510043df6c93db2/megalodon-2.3.0.tar.gz#sha256=aabd59e6a62c15d78438a8ba2b9ad87baa4a675a11c88e6da327fc0412472c97 (from https://pypi.org/simple/megalodon/), version: 2.3.0 2021-07-28T23:37:20,315 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/89/ca/b8b717f61b34ea09ed4a19b0ba7c088f44efbd84c3e6d4ee04797e98022b/megalodon-2.3.1-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=766658f797630a8dbc4c2a41aebd017fcf736b46b078d83ad062d85d09bc13ed (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,315 Found link https://files.pythonhosted.org/packages/a2/b9/4730d767af8173b026270f434ac0faac38cc527e85218736e83b39ff9b3a/megalodon-2.3.1.tar.gz#sha256=db878b0221d48c95a3f661b749eaf883e750c51c000898f86fdcccce26e7f314 (from https://pypi.org/simple/megalodon/), version: 2.3.1 2021-07-28T23:37:20,316 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/6e/a9/dade983077875bca37f2558709482ec2638f0e236bf450d1355a852506e6/megalodon-2.3.2-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=1db76329f8e023d8136c3e4bff446e4c64d53c290cae93d8ddc773fe3ed50b22 (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,316 Found link https://files.pythonhosted.org/packages/35/ae/d788181d8ad6d23022ad17ef333ba0ae1f29c91aed2fe4988806d9e58cab/megalodon-2.3.2.tar.gz#sha256=9db393af4a91998eaf56b67dffa7664c556259e3b4cc7c469d667769ad8590aa (from https://pypi.org/simple/megalodon/), version: 2.3.2 2021-07-28T23:37:20,316 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/cf/b2/456dd3c337f80c9f55d276df727f4c95ec13de7f7ef2b72a69f6889c033d/megalodon-2.3.3-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=512a2a34e3a0e5e55419c98c11c4ecabeb3b2fcc56f9b3c89581ffbde2c1bc1a (from https://pypi.org/simple/megalodon/) 2021-07-28T23:37:20,316 Found link https://files.pythonhosted.org/packages/2f/c2/3466feebb701a2aa549833f13a1d4061d87ebaddaec55c2be9bb09ccf2f1/megalodon-2.3.3.tar.gz#sha256=aa463d72829f49506c2b2d2c5700ea57d382d8e7d9840590dbfbc3771b754e66 (from https://pypi.org/simple/megalodon/), version: 2.3.3 2021-07-28T23:37:20,317 Skipping link: No binaries permitted for megalodon: https://files.pythonhosted.org/packages/85/31/eda4a2777fd88cd41f1492bc0972f887bebfa40d1cd8e38a881b14187830/megalodon-2.3.4-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=3cf03db999eab0ccf58ffb1d4f87ec60ac7cf07e5a8ad8d7adceedad8f201beb (from https://pypi.org/simple/megalodon/) (requires-python:>=3.6) 2021-07-28T23:37:20,317 Found link https://files.pythonhosted.org/packages/eb/ff/dbaac26e1b426af272ff2e5938c7d56754160450530b39f6b7cda83a8b29/megalodon-2.3.4.tar.gz#sha256=d1b3ed894483fd14d7d02dfdf8c7da9a66e8571b10ccf5b78ae0b0c0d1c077bb (from https://pypi.org/simple/megalodon/) (requires-python:>=3.6), version: 2.3.4 2021-07-28T23:37:20,318 Skipping link: not a file: https://pypi.org/simple/megalodon/ 2021-07-28T23:37:20,336 Given no hashes to check 1 links for project 'megalodon': discarding no candidates 2021-07-28T23:37:20,353 Collecting megalodon==2.2.10 2021-07-28T23:37:20,354 Created temporary directory: /tmp/pip-unpack-betkfpjb 2021-07-28T23:37:23,281 Downloading megalodon-2.2.10.tar.gz (8.1 MB) 2021-07-28T23:37:25,110 Added megalodon==2.2.10 from https://files.pythonhosted.org/packages/c4/f8/97ed0590b57f2105b63c9141901cc9488fd94d4d0550cf316d9737092701/megalodon-2.2.10.tar.gz#sha256=2b4bbfaec07fed5e6f6083025a34b60d65cdb39ed92d05a5ef9454b8a9e428d5 to build tracker '/tmp/pip-req-tracker-r5xmr3cs' 2021-07-28T23:37:25,111 Running setup.py (path:/tmp/pip-wheel-gakxa9le/megalodon_9806ffefa00846eb86b09e7c44d2805c/setup.py) egg_info for package megalodon 2021-07-28T23:37:25,112 Created temporary directory: /tmp/pip-pip-egg-info-dt4uxrtr 2021-07-28T23:37:25,112 Running command python setup.py egg_info 2021-07-28T23:37:26,215 running egg_info 2021-07-28T23:37:26,217 creating /tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info 2021-07-28T23:37:26,218 writing /tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/PKG-INFO 2021-07-28T23:37:26,221 writing dependency_links to /tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/dependency_links.txt 2021-07-28T23:37:26,223 writing entry points to /tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/entry_points.txt 2021-07-28T23:37:26,224 writing requirements to /tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/requires.txt 2021-07-28T23:37:26,225 writing top-level names to /tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/top_level.txt 2021-07-28T23:37:26,227 writing manifest file '/tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/SOURCES.txt' 2021-07-28T23:37:26,617 reading manifest file '/tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/SOURCES.txt' 2021-07-28T23:37:26,619 reading manifest template 'MANIFEST.in' 2021-07-28T23:37:26,620 adding license file 'LICENCE.txt' 2021-07-28T23:37:26,625 writing manifest file '/tmp/pip-pip-egg-info-dt4uxrtr/megalodon.egg-info/SOURCES.txt' 2021-07-28T23:37:26,731 Source in /tmp/pip-wheel-gakxa9le/megalodon_9806ffefa00846eb86b09e7c44d2805c has version 2.2.10, which satisfies requirement megalodon==2.2.10 from https://files.pythonhosted.org/packages/c4/f8/97ed0590b57f2105b63c9141901cc9488fd94d4d0550cf316d9737092701/megalodon-2.2.10.tar.gz#sha256=2b4bbfaec07fed5e6f6083025a34b60d65cdb39ed92d05a5ef9454b8a9e428d5 2021-07-28T23:37:26,732 Removed megalodon==2.2.10 from https://files.pythonhosted.org/packages/c4/f8/97ed0590b57f2105b63c9141901cc9488fd94d4d0550cf316d9737092701/megalodon-2.2.10.tar.gz#sha256=2b4bbfaec07fed5e6f6083025a34b60d65cdb39ed92d05a5ef9454b8a9e428d5 from build tracker '/tmp/pip-req-tracker-r5xmr3cs' 2021-07-28T23:37:26,737 Created temporary directory: /tmp/pip-unpack-8xqbvncy 2021-07-28T23:37:26,738 Building wheels for collected packages: megalodon 2021-07-28T23:37:26,742 Created temporary directory: /tmp/pip-wheel-dd_wjuta 2021-07-28T23:37:26,743 Building wheel for megalodon (setup.py): started 2021-07-28T23:37:26,743 Destination directory: /tmp/pip-wheel-dd_wjuta 2021-07-28T23:37:26,744 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-gakxa9le/megalodon_9806ffefa00846eb86b09e7c44d2805c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-gakxa9le/megalodon_9806ffefa00846eb86b09e7c44d2805c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dd_wjuta 2021-07-28T23:37:27,821 running bdist_wheel 2021-07-28T23:37:28,012 running build 2021-07-28T23:37:28,012 running build_py 2021-07-28T23:37:28,150 creating build 2021-07-28T23:37:28,151 creating build/lib.linux-armv7l-3.9 2021-07-28T23:37:28,152 creating build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,153 copying megalodon/megalodon_helper.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,156 copying megalodon/calibration.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,159 copying megalodon/backends.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,163 copying megalodon/_version.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,164 copying megalodon/logging.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,166 copying megalodon/signal_mapping.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,168 copying megalodon/megalodon_multiprocessing.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,170 copying megalodon/__main__.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,173 copying megalodon/megalodon.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,177 copying megalodon/variants.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,181 copying megalodon/mods.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,187 copying megalodon/aggregate.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,190 copying megalodon/__init__.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,191 copying megalodon/fast5_io.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,194 copying megalodon/mapping.py -> build/lib.linux-armv7l-3.9/megalodon 2021-07-28T23:37:28,200 creating build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,201 copying megalodon_extras/validate_aggregated_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,203 copying megalodon_extras/calibrate_merge_modified_bases_stats.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,205 copying megalodon_extras/per_read_text_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,207 copying megalodon_extras/aggregate_run.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,209 copying megalodon_extras/modified_bases_per_site_thresholds.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,212 copying megalodon_extras/variants_resolve.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,214 copying megalodon_extras/modified_bases_update_database.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,216 copying megalodon_extras/modified_bases_create_ground_truth.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,218 copying megalodon_extras/modified_bases_index_database.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,220 copying megalodon_extras/_extras_parsers.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,224 copying megalodon_extras/calibrate_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,226 copying megalodon_extras/merge_aggregated_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,228 copying megalodon_extras/variants_heterozygous_factor.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,230 copying megalodon_extras/per_read_text_variants.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,232 copying megalodon_extras/variants_atomize.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,234 copying megalodon_extras/modified_bases_create_motif_bed.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,236 copying megalodon_extras/modified_bases_split_by_motif.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,238 copying megalodon_extras/variants_index_database.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,240 copying megalodon_extras/phase_variants_whatshap_filter.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,242 copying megalodon_extras/calibrate_generate_modified_base_stats.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,244 copying megalodon_extras/phase_variants_merge_haploid_variants.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,247 copying megalodon_extras/__main__.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,249 copying megalodon_extras/calibrate_merge_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,251 copying megalodon_extras/validate_results.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,254 copying megalodon_extras/calibrate_variants.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,256 copying megalodon_extras/calibrate_generate_mod_stats_from_msf.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,259 copying megalodon_extras/merge_variants.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,261 copying megalodon_extras/__init__.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,262 copying megalodon_extras/modified_bases_describe_alphabet.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,264 copying megalodon_extras/merge_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,266 copying megalodon_extras/validate_compare_modified_bases.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,269 copying megalodon_extras/phase_variants_extract_haplotype_reads.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,271 copying megalodon_extras/modified_bases_estimate_threshold.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,272 copying megalodon_extras/calibrate_generate_variant_stats.py -> build/lib.linux-armv7l-3.9/megalodon_extras 2021-07-28T23:37:28,289 creating build/lib.linux-armv7l-3.9/megalodon/model_data 2021-07-28T23:37:28,289 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:28,291 copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:28,299 copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:28,303 copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:28,307 copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:28,328 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg 2021-07-28T23:37:28,329 copying megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg 2021-07-28T23:37:28,336 copying megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg 2021-07-28T23:37:28,360 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg 2021-07-28T23:37:28,361 copying megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg 2021-07-28T23:37:28,367 copying megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg 2021-07-28T23:37:28,390 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg 2021-07-28T23:37:28,391 copying megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg 2021-07-28T23:37:28,400 copying megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg 2021-07-28T23:37:28,424 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg 2021-07-28T23:37:28,425 copying megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg 2021-07-28T23:37:28,432 copying megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg 2021-07-28T23:37:28,457 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg 2021-07-28T23:37:28,457 copying megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg 2021-07-28T23:37:28,465 copying megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg 2021-07-28T23:37:28,490 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast.cfg 2021-07-28T23:37:28,491 copying megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast.cfg 2021-07-28T23:37:28,498 copying megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast.cfg 2021-07-28T23:37:28,526 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,527 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,536 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,539 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,542 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,570 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:28,571 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:28,579 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:28,583 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:28,591 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:28,619 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,620 copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,626 copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,629 copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,632 copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:28,655 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:28,656 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:28,663 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:28,667 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:28,676 copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:28,704 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac.cfg 2021-07-28T23:37:28,705 copying megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac.cfg 2021-07-28T23:37:28,712 copying megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac.cfg 2021-07-28T23:37:28,737 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:28,738 copying megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:28,741 copying megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:28,744 creating build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg 2021-07-28T23:37:28,745 copying megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg 2021-07-28T23:37:28,751 copying megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg 2021-07-28T23:37:28,779 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:28,780 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:28,787 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:28,791 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:28,798 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:28,820 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:28,821 copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:28,824 copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:28,827 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg 2021-07-28T23:37:28,828 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg 2021-07-28T23:37:28,832 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg 2021-07-28T23:37:28,836 creating build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg 2021-07-28T23:37:28,836 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg 2021-07-28T23:37:28,841 copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg 2021-07-28T23:37:28,848 running build_ext 2021-07-28T23:37:28,854 cythoning megalodon/_decode.pyx to megalodon/_decode.c 2021-07-28T23:37:32,606 building 'megalodon.decode' extension 2021-07-28T23:37:32,607 creating build/temp.linux-armv7l-3.9 2021-07-28T23:37:32,607 creating build/temp.linux-armv7l-3.9/megalodon 2021-07-28T23:37:32,608 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c megalodon/_decode.c -o build/temp.linux-armv7l-3.9/megalodon/_decode.o -std=c99 2021-07-28T23:37:32,988 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-28T23:37:32,988 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-28T23:37:32,988 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-28T23:37:32,988 from megalodon/_decode.c:614: 2021-07-28T23:37:32,989 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-28T23:37:32,989 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-28T23:37:32,989 | ^~~~~~~ 2021-07-28T23:37:42,990 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/megalodon/_decode.o -o build/lib.linux-armv7l-3.9/megalodon/decode.cpython-39-arm-linux-gnueabihf.so 2021-07-28T23:37:43,147 installing to build/bdist.linux-armv7l/wheel 2021-07-28T23:37:43,148 running install 2021-07-28T23:37:43,149 running install_lib 2021-07-28T23:37:43,153 creating build/bdist.linux-armv7l 2021-07-28T23:37:43,154 creating build/bdist.linux-armv7l/wheel 2021-07-28T23:37:43,156 creating build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,157 copying build/lib.linux-armv7l-3.9/megalodon/megalodon_helper.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,160 copying build/lib.linux-armv7l-3.9/megalodon/calibration.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,163 copying build/lib.linux-armv7l-3.9/megalodon/decode.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,181 copying build/lib.linux-armv7l-3.9/megalodon/backends.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,185 copying build/lib.linux-armv7l-3.9/megalodon/_version.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,186 copying build/lib.linux-armv7l-3.9/megalodon/logging.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,188 copying build/lib.linux-armv7l-3.9/megalodon/signal_mapping.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,190 copying build/lib.linux-armv7l-3.9/megalodon/megalodon_multiprocessing.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,193 creating build/bdist.linux-armv7l/wheel/megalodon/model_data 2021-07-28T23:37:43,195 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:43,196 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:43,204 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:43,208 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:43,211 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg 2021-07-28T23:37:43,236 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg 2021-07-28T23:37:43,237 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg 2021-07-28T23:37:43,247 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg 2021-07-28T23:37:43,274 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg 2021-07-28T23:37:43,274 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg 2021-07-28T23:37:43,280 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg 2021-07-28T23:37:43,305 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg 2021-07-28T23:37:43,306 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg 2021-07-28T23:37:43,313 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg 2021-07-28T23:37:43,337 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg 2021-07-28T23:37:43,338 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg 2021-07-28T23:37:43,344 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg 2021-07-28T23:37:43,369 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg 2021-07-28T23:37:43,370 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg 2021-07-28T23:37:43,377 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg 2021-07-28T23:37:43,400 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg 2021-07-28T23:37:43,401 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg 2021-07-28T23:37:43,407 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg 2021-07-28T23:37:43,431 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,432 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,439 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,442 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,445 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,469 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:43,471 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:43,478 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:43,482 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:43,490 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg 2021-07-28T23:37:43,519 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,520 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,527 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,531 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,534 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg 2021-07-28T23:37:43,561 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:43,562 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:43,569 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:43,574 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:43,581 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg 2021-07-28T23:37:43,610 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg 2021-07-28T23:37:43,612 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg 2021-07-28T23:37:43,620 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg 2021-07-28T23:37:43,647 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:43,648 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:43,652 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:43,655 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg 2021-07-28T23:37:43,656 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg 2021-07-28T23:37:43,665 copying build/lib.linux-armv7l-3.9/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg 2021-07-28T23:37:43,695 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:43,696 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:43,704 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:43,709 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:43,717 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg 2021-07-28T23:37:43,744 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:43,745 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:43,749 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg 2021-07-28T23:37:43,753 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg 2021-07-28T23:37:43,754 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg 2021-07-28T23:37:43,758 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg 2021-07-28T23:37:43,761 creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg 2021-07-28T23:37:43,763 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg 2021-07-28T23:37:43,768 copying build/lib.linux-armv7l-3.9/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg 2021-07-28T23:37:43,773 copying build/lib.linux-armv7l-3.9/megalodon/__main__.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,777 copying build/lib.linux-armv7l-3.9/megalodon/megalodon.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,782 copying build/lib.linux-armv7l-3.9/megalodon/variants.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,788 copying build/lib.linux-armv7l-3.9/megalodon/mods.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,795 copying build/lib.linux-armv7l-3.9/megalodon/aggregate.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,798 copying build/lib.linux-armv7l-3.9/megalodon/__init__.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,800 copying build/lib.linux-armv7l-3.9/megalodon/fast5_io.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,804 copying build/lib.linux-armv7l-3.9/megalodon/mapping.py -> build/bdist.linux-armv7l/wheel/megalodon 2021-07-28T23:37:43,808 creating build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,810 copying build/lib.linux-armv7l-3.9/megalodon_extras/validate_aggregated_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,813 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_merge_modified_bases_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,816 copying build/lib.linux-armv7l-3.9/megalodon_extras/per_read_text_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,818 copying build/lib.linux-armv7l-3.9/megalodon_extras/aggregate_run.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,821 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_per_site_thresholds.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,824 copying build/lib.linux-armv7l-3.9/megalodon_extras/variants_resolve.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,827 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_update_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,830 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_create_ground_truth.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,832 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_index_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,834 copying build/lib.linux-armv7l-3.9/megalodon_extras/_extras_parsers.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,838 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,841 copying build/lib.linux-armv7l-3.9/megalodon_extras/merge_aggregated_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,844 copying build/lib.linux-armv7l-3.9/megalodon_extras/variants_heterozygous_factor.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,847 copying build/lib.linux-armv7l-3.9/megalodon_extras/per_read_text_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,849 copying build/lib.linux-armv7l-3.9/megalodon_extras/variants_atomize.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,852 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_create_motif_bed.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,855 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_split_by_motif.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,857 copying build/lib.linux-armv7l-3.9/megalodon_extras/variants_index_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,860 copying build/lib.linux-armv7l-3.9/megalodon_extras/phase_variants_whatshap_filter.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,862 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_generate_modified_base_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,865 copying build/lib.linux-armv7l-3.9/megalodon_extras/phase_variants_merge_haploid_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,868 copying build/lib.linux-armv7l-3.9/megalodon_extras/__main__.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,871 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_merge_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,874 copying build/lib.linux-armv7l-3.9/megalodon_extras/validate_results.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,877 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,880 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_generate_mod_stats_from_msf.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,883 copying build/lib.linux-armv7l-3.9/megalodon_extras/merge_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,886 copying build/lib.linux-armv7l-3.9/megalodon_extras/__init__.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,888 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_describe_alphabet.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,890 copying build/lib.linux-armv7l-3.9/megalodon_extras/merge_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,893 copying build/lib.linux-armv7l-3.9/megalodon_extras/validate_compare_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,896 copying build/lib.linux-armv7l-3.9/megalodon_extras/phase_variants_extract_haplotype_reads.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,899 copying build/lib.linux-armv7l-3.9/megalodon_extras/modified_bases_estimate_threshold.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,901 copying build/lib.linux-armv7l-3.9/megalodon_extras/calibrate_generate_variant_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras 2021-07-28T23:37:43,904 running install_egg_info 2021-07-28T23:37:43,934 running egg_info 2021-07-28T23:37:43,935 writing megalodon.egg-info/PKG-INFO 2021-07-28T23:37:43,939 writing dependency_links to megalodon.egg-info/dependency_links.txt 2021-07-28T23:37:43,941 writing entry points to megalodon.egg-info/entry_points.txt 2021-07-28T23:37:43,942 writing requirements to megalodon.egg-info/requires.txt 2021-07-28T23:37:43,943 writing top-level names to megalodon.egg-info/top_level.txt 2021-07-28T23:37:43,966 reading manifest file 'megalodon.egg-info/SOURCES.txt' 2021-07-28T23:37:43,971 reading manifest template 'MANIFEST.in' 2021-07-28T23:37:43,972 adding license file 'LICENCE.txt' 2021-07-28T23:37:43,981 writing manifest file 'megalodon.egg-info/SOURCES.txt' 2021-07-28T23:37:43,984 Copying megalodon.egg-info to build/bdist.linux-armv7l/wheel/megalodon-2.2.10-py3.9.egg-info 2021-07-28T23:37:44,000 running install_scripts 2021-07-28T23:37:44,054 adding license file "LICENCE.txt" (matched pattern "LICEN[CS]E*") 2021-07-28T23:37:44,060 creating build/bdist.linux-armv7l/wheel/megalodon-2.2.10.dist-info/WHEEL 2021-07-28T23:37:44,063 creating '/tmp/pip-wheel-dd_wjuta/megalodon-2.2.10-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-28T23:37:44,066 adding 'megalodon/__init__.py' 2021-07-28T23:37:44,069 adding 'megalodon/__main__.py' 2021-07-28T23:37:44,071 adding 'megalodon/_version.py' 2021-07-28T23:37:44,073 adding 'megalodon/aggregate.py' 2021-07-28T23:37:44,081 adding 'megalodon/backends.py' 2021-07-28T23:37:44,084 adding 'megalodon/calibration.py' 2021-07-28T23:37:44,206 adding 'megalodon/decode.cpython-39-arm-linux-gnueabihf.so' 2021-07-28T23:37:44,213 adding 'megalodon/fast5_io.py' 2021-07-28T23:37:44,215 adding 'megalodon/logging.py' 2021-07-28T23:37:44,218 adding 'megalodon/mapping.py' 2021-07-28T23:37:44,225 adding 'megalodon/megalodon.py' 2021-07-28T23:37:44,231 adding 'megalodon/megalodon_helper.py' 2021-07-28T23:37:44,233 adding 'megalodon/megalodon_multiprocessing.py' 2021-07-28T23:37:44,245 adding 'megalodon/mods.py' 2021-07-28T23:37:44,248 adding 'megalodon/signal_mapping.py' 2021-07-28T23:37:44,259 adding 'megalodon/variants.py' 2021-07-28T23:37:44,321 adding 'megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,349 adding 'megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,400 adding 'megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,430 adding 'megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,478 adding 'megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,508 adding 'megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,561 adding 'megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,590 adding 'megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,650 adding 'megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,679 adding 'megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,735 adding 'megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,764 adding 'megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,824 adding 'megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,854 adding 'megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,906 adding 'megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:44,935 adding 'megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:44,945 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:44,972 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,033 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:45,068 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:45,080 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,102 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,158 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:45,190 adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:45,198 adding 'megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,201 adding 'megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,208 adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,213 adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,260 adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:45,289 adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:45,299 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,321 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,375 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:45,404 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:45,416 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,421 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,426 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,429 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,475 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:45,504 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:45,510 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,513 adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,518 adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,521 adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,565 adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz' 2021-07-28T23:37:45,595 adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf' 2021-07-28T23:37:45,602 adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.npz' 2021-07-28T23:37:45,605 adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001.cfg/megalodon_mod_calibration.pdf' 2021-07-28T23:37:45,609 adding 'megalodon_extras/__init__.py' 2021-07-28T23:37:45,611 adding 'megalodon_extras/__main__.py' 2021-07-28T23:37:45,616 adding 'megalodon_extras/_extras_parsers.py' 2021-07-28T23:37:45,618 adding 'megalodon_extras/aggregate_run.py' 2021-07-28T23:37:45,620 adding 'megalodon_extras/calibrate_generate_mod_stats_from_msf.py' 2021-07-28T23:37:45,622 adding 'megalodon_extras/calibrate_generate_modified_base_stats.py' 2021-07-28T23:37:45,625 adding 'megalodon_extras/calibrate_generate_variant_stats.py' 2021-07-28T23:37:45,627 adding 'megalodon_extras/calibrate_merge_modified_bases.py' 2021-07-28T23:37:45,628 adding 'megalodon_extras/calibrate_merge_modified_bases_stats.py' 2021-07-28T23:37:45,630 adding 'megalodon_extras/calibrate_modified_bases.py' 2021-07-28T23:37:45,632 adding 'megalodon_extras/calibrate_variants.py' 2021-07-28T23:37:45,634 adding 'megalodon_extras/merge_aggregated_modified_bases.py' 2021-07-28T23:37:45,636 adding 'megalodon_extras/merge_modified_bases.py' 2021-07-28T23:37:45,638 adding 'megalodon_extras/merge_variants.py' 2021-07-28T23:37:45,639 adding 'megalodon_extras/modified_bases_create_ground_truth.py' 2021-07-28T23:37:45,641 adding 'megalodon_extras/modified_bases_create_motif_bed.py' 2021-07-28T23:37:45,642 adding 'megalodon_extras/modified_bases_describe_alphabet.py' 2021-07-28T23:37:45,644 adding 'megalodon_extras/modified_bases_estimate_threshold.py' 2021-07-28T23:37:45,645 adding 'megalodon_extras/modified_bases_index_database.py' 2021-07-28T23:37:45,647 adding 'megalodon_extras/modified_bases_per_site_thresholds.py' 2021-07-28T23:37:45,650 adding 'megalodon_extras/modified_bases_split_by_motif.py' 2021-07-28T23:37:45,651 adding 'megalodon_extras/modified_bases_update_database.py' 2021-07-28T23:37:45,653 adding 'megalodon_extras/per_read_text_modified_bases.py' 2021-07-28T23:37:45,655 adding 'megalodon_extras/per_read_text_variants.py' 2021-07-28T23:37:45,656 adding 'megalodon_extras/phase_variants_extract_haplotype_reads.py' 2021-07-28T23:37:45,658 adding 'megalodon_extras/phase_variants_merge_haploid_variants.py' 2021-07-28T23:37:45,660 adding 'megalodon_extras/phase_variants_whatshap_filter.py' 2021-07-28T23:37:45,662 adding 'megalodon_extras/validate_aggregated_modified_bases.py' 2021-07-28T23:37:45,664 adding 'megalodon_extras/validate_compare_modified_bases.py' 2021-07-28T23:37:45,667 adding 'megalodon_extras/validate_results.py' 2021-07-28T23:37:45,669 adding 'megalodon_extras/variants_atomize.py' 2021-07-28T23:37:45,671 adding 'megalodon_extras/variants_heterozygous_factor.py' 2021-07-28T23:37:45,672 adding 'megalodon_extras/variants_index_database.py' 2021-07-28T23:37:45,674 adding 'megalodon_extras/variants_resolve.py' 2021-07-28T23:37:45,677 adding 'megalodon-2.2.10.dist-info/LICENCE.txt' 2021-07-28T23:37:45,680 adding 'megalodon-2.2.10.dist-info/METADATA' 2021-07-28T23:37:45,681 adding 'megalodon-2.2.10.dist-info/WHEEL' 2021-07-28T23:37:45,682 adding 'megalodon-2.2.10.dist-info/entry_points.txt' 2021-07-28T23:37:45,683 adding 'megalodon-2.2.10.dist-info/top_level.txt' 2021-07-28T23:37:45,686 adding 'megalodon-2.2.10.dist-info/RECORD' 2021-07-28T23:37:45,812 removing build/bdist.linux-armv7l/wheel 2021-07-28T23:37:46,093 Building wheel for megalodon (setup.py): finished with status 'done' 2021-07-28T23:37:46,198 Created wheel for megalodon: filename=megalodon-2.2.10-cp39-cp39-linux_armv7l.whl size=8320539 sha256=7f3c72ed3606ffc08e3b8bdad534979b140f2dab1ff4697510415066ac0fb54e 2021-07-28T23:37:46,198 Stored in directory: /tmp/pip-ephem-wheel-cache-47_7duyk/wheels/42/b0/18/9752d2c4f67d741e76718b648854d88fd8cc27f8e94f893b23 2021-07-28T23:37:46,215 Successfully built megalodon 2021-07-28T23:37:46,459 Removed build tracker: '/tmp/pip-req-tracker-r5xmr3cs'