2021-07-29T02:33:20,004 Created temporary directory: /tmp/pip-ephem-wheel-cache-xr35r1vm
2021-07-29T02:33:20,007 Created temporary directory: /tmp/pip-req-tracker-0eb4eab0
2021-07-29T02:33:20,007 Initialized build tracking at /tmp/pip-req-tracker-0eb4eab0
2021-07-29T02:33:20,007 Created build tracker: /tmp/pip-req-tracker-0eb4eab0
2021-07-29T02:33:20,008 Entered build tracker: /tmp/pip-req-tracker-0eb4eab0
2021-07-29T02:33:20,008 Created temporary directory: /tmp/pip-wheel-p5w5xtwy
2021-07-29T02:33:20,043 WARNING: The index url "/" seems invalid, please provide a scheme.
2021-07-29T02:33:20,044 WARNING: The index url "t" seems invalid, please provide a scheme.
2021-07-29T02:33:20,044 WARNING: The index url "m" seems invalid, please provide a scheme.
2021-07-29T02:33:20,044 WARNING: The index url "p" seems invalid, please provide a scheme.
2021-07-29T02:33:20,044 Looking in indexes: https://pypi.org/simple, /, t, m, p
2021-07-29T02:33:20,047 WARNING: Location '/gevo/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T02:33:20,047 WARNING: Location 't/gevo/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T02:33:20,048 WARNING: Location 'm/gevo/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T02:33:20,048 WARNING: Location 'p/gevo/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T02:33:20,048 1 location(s) to search for versions of gevo:
2021-07-29T02:33:20,048 * https://pypi.org/simple/gevo/
2021-07-29T02:33:20,049 Fetching project page and analyzing links: https://pypi.org/simple/gevo/
2021-07-29T02:33:20,049 Getting page https://pypi.org/simple/gevo/
2021-07-29T02:33:20,051 Found index url https://pypi.org/simple
2021-07-29T02:33:20,242   Found link https://files.pythonhosted.org/packages/6b/30/d0f0a6c0a80358e29330e39de0fb248aa20767e16bc3f4408abf0e73b1bd/gevo-1.0.0.tar.gz#sha256=c788c9ecd01c83527cfdd20caec1c660fdcf20a45cb3deb001ffa0918c73a33b (from https://pypi.org/simple/gevo/) (requires-python:>=3.5), version: 1.0.0
2021-07-29T02:33:20,243   Found link https://files.pythonhosted.org/packages/2e/d2/7db209c56623eaeb9b5a5ab3b2f9074b096b0b360e396a273b0730791992/gevo-1.0.1.tar.gz#sha256=c10101a4468d37a1536ac1b69077dc3b8790805caa2c85abbdb5dee0844fdc40 (from https://pypi.org/simple/gevo/) (requires-python:>=3.5), version: 1.0.1
2021-07-29T02:33:20,243   Found link https://files.pythonhosted.org/packages/7b/ae/e8d2b405972e048b2a4392e144e4a39f964670e6d1e9605d5106bd4357c0/gevo-1.1.1.tar.gz#sha256=451db3cc86e631a3795a70800c8064ad02035bea55740f05e13222dfe98d821a (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.1.1
2021-07-29T02:33:20,244   Found link https://files.pythonhosted.org/packages/3c/21/8c821765fad3e20eabf3971adba90dde56387f5e6762497918951146e71e/gevo-1.2.0-1.tar.gz#sha256=42605b6821bfb866a70dc76befa639d4eb9b7539896cdae40a0f2531dcc0e842 (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.0-1
2021-07-29T02:33:20,245   Found link https://files.pythonhosted.org/packages/0a/76/37d493d114e8e02fe076b26a13c57b21317f7f506f15bec954fc27d1b206/gevo-1.2.1.tar.gz#sha256=fed96a6fff55a9b6f2c83def54e0fa584b80b144d13302ba2c1d0ff8124043e3 (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.1
2021-07-29T02:33:20,245   Found link https://files.pythonhosted.org/packages/53/61/9612f339be59e0522e7343cdb59dc7da77fbb8ea501fcccbcd1718947b0a/gevo-1.2.2.tar.gz#sha256=d28dd5a3df8f2ca98b4843d29b52f1b6244cccf67945fdeb0f9e8272f481fc6d (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.2
2021-07-29T02:33:20,246   Found link https://files.pythonhosted.org/packages/dc/71/f3ec8ea72d7b3d2b17d5a9dda0b294b162cd4ff596f78da69d781b4ca0fe/gevo-1.2.3.tar.gz#sha256=f94fbaf6233635a1666c1b5afcb04f294e48c3fef9d918e15d299375a3b38b51 (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.3
2021-07-29T02:33:20,246   Found link https://files.pythonhosted.org/packages/f8/12/49cd544a99d9cc1cfb72ddd644e6b379159650ff968dfea3751959cd6455/gevo-1.2.4.tar.gz#sha256=5dbebff2e576f073d0b572898db6107e6ca5668dec742eb46c7e45b13e0fe8b8 (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.4
2021-07-29T02:33:20,247   Found link https://files.pythonhosted.org/packages/e8/71/b8c5508beb1403632e08c96ed12af6d9b1b554fc8822fb00510e013e45fc/gevo-1.2.4.post1.tar.gz#sha256=4b8b56ed502918a4c99c736fb98d08e8cb45e956e2f0f57b0d79c2acbdcbe70d (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.4.post1
2021-07-29T02:33:20,247   Found link https://files.pythonhosted.org/packages/57/2e/b382b477bc896b7e80663440ad2e2a558cfdd52ee49f90eb94345cce43f0/gevo-1.2.5.tar.gz#sha256=db3d2a6c56be692124511a8b0bf35573d470524887f8d2640bc69259cae14926 (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.5
2021-07-29T02:33:20,248   Found link https://files.pythonhosted.org/packages/41/9b/0654b52d3969dcd399cb532fcbf6e1a3d9b2e15100c8c0e8e99b0de96f76/gevo-1.2.6.tar.gz#sha256=ee4189abcf3974e50a62d2722529d42c344312309e20cad47996879ba0d73017 (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.6
2021-07-29T02:33:20,248 Skipping link: not a file: https://pypi.org/simple/gevo/
2021-07-29T02:33:20,266 Given no hashes to check 1 links for project 'gevo': discarding no candidates
2021-07-29T02:33:20,283 Collecting gevo==1.1.1
2021-07-29T02:33:20,284   Created temporary directory: /tmp/pip-unpack-0i_qtui2
2021-07-29T02:33:20,459   Downloading gevo-1.1.1.tar.gz (19 kB)
2021-07-29T02:33:20,534   Added gevo==1.1.1 from https://files.pythonhosted.org/packages/7b/ae/e8d2b405972e048b2a4392e144e4a39f964670e6d1e9605d5106bd4357c0/gevo-1.1.1.tar.gz#sha256=451db3cc86e631a3795a70800c8064ad02035bea55740f05e13222dfe98d821a to build tracker '/tmp/pip-req-tracker-0eb4eab0'
2021-07-29T02:33:20,536     Running setup.py (path:/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py) egg_info for package gevo
2021-07-29T02:33:20,536     Created temporary directory: /tmp/pip-pip-egg-info-j4bjotz3
2021-07-29T02:33:20,537     Running command python setup.py egg_info
2021-07-29T02:33:21,487     running egg_info
2021-07-29T02:33:21,489     creating /tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info
2021-07-29T02:33:21,490     writing /tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/PKG-INFO
2021-07-29T02:33:21,493     writing dependency_links to /tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/dependency_links.txt
2021-07-29T02:33:21,495     writing requirements to /tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/requires.txt
2021-07-29T02:33:21,496     writing top-level names to /tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/top_level.txt
2021-07-29T02:33:21,497     writing manifest file '/tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/SOURCES.txt'
2021-07-29T02:33:21,649     reading manifest file '/tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/SOURCES.txt'
2021-07-29T02:33:21,652     writing manifest file '/tmp/pip-pip-egg-info-j4bjotz3/gevo.egg-info/SOURCES.txt'
2021-07-29T02:33:21,726   Source in /tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439 has version 1.1.1, which satisfies requirement gevo==1.1.1 from https://files.pythonhosted.org/packages/7b/ae/e8d2b405972e048b2a4392e144e4a39f964670e6d1e9605d5106bd4357c0/gevo-1.1.1.tar.gz#sha256=451db3cc86e631a3795a70800c8064ad02035bea55740f05e13222dfe98d821a
2021-07-29T02:33:21,727   Removed gevo==1.1.1 from https://files.pythonhosted.org/packages/7b/ae/e8d2b405972e048b2a4392e144e4a39f964670e6d1e9605d5106bd4357c0/gevo-1.1.1.tar.gz#sha256=451db3cc86e631a3795a70800c8064ad02035bea55740f05e13222dfe98d821a from build tracker '/tmp/pip-req-tracker-0eb4eab0'
2021-07-29T02:33:21,733 Created temporary directory: /tmp/pip-unpack-390kdzds
2021-07-29T02:33:21,734 Building wheels for collected packages: gevo
2021-07-29T02:33:21,739   Created temporary directory: /tmp/pip-wheel-vxibtoo3
2021-07-29T02:33:21,740   Building wheel for gevo (setup.py): started
2021-07-29T02:33:21,740   Destination directory: /tmp/pip-wheel-vxibtoo3
2021-07-29T02:33:21,740   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-vxibtoo3
2021-07-29T02:33:22,706   running bdist_wheel
2021-07-29T02:33:22,710   running build
2021-07-29T02:33:22,710   running build_py
2021-07-29T02:33:22,850   creating build
2021-07-29T02:33:22,850   creating build/lib.linux-armv7l-3.9
2021-07-29T02:33:22,851   creating build/lib.linux-armv7l-3.9/gevo
2021-07-29T02:33:22,852   copying gevo/evolve.py -> build/lib.linux-armv7l-3.9/gevo
2021-07-29T02:33:22,855   copying gevo/__init__.py -> build/lib.linux-armv7l-3.9/gevo
2021-07-29T02:33:22,857   copying gevo/irind.py -> build/lib.linux-armv7l-3.9/gevo
2021-07-29T02:33:22,859   running build_ext
2021-07-29T02:33:22,867   creating tmp
2021-07-29T02:33:22,867   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpc2sptffw.cpp -o tmp/tmpc2sptffw.o -std=c++11
2021-07-29T02:33:23,192   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c /tmp/tmp15bksa53.cpp -o tmp/tmp15bksa53.o -fvisibility=hidden
2021-07-29T02:33:23,289   building 'fuzzycompare' extension
2021-07-29T02:33:23,292   Traceback (most recent call last):
2021-07-29T02:33:23,292     File "<string>", line 1, in <module>
2021-07-29T02:33:23,292     File "/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py", line 96, in <module>
2021-07-29T02:33:23,293       setup(
2021-07-29T02:33:23,293     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-07-29T02:33:23,293       return distutils.core.setup(**attrs)
2021-07-29T02:33:23,293     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-07-29T02:33:23,294       dist.run_commands()
2021-07-29T02:33:23,294     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-07-29T02:33:23,295       self.run_command(cmd)
2021-07-29T02:33:23,295     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-29T02:33:23,296       cmd_obj.run()
2021-07-29T02:33:23,296     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-07-29T02:33:23,297       self.run_command('build')
2021-07-29T02:33:23,297     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-29T02:33:23,297       self.distribution.run_command(command)
2021-07-29T02:33:23,298     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-29T02:33:23,298       cmd_obj.run()
2021-07-29T02:33:23,299     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-07-29T02:33:23,299       self.run_command(cmd_name)
2021-07-29T02:33:23,299     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-07-29T02:33:23,300       self.distribution.run_command(command)
2021-07-29T02:33:23,300     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-07-29T02:33:23,301       cmd_obj.run()
2021-07-29T02:33:23,301     File "/usr/local/lib/python3.9/dist-packages/setuptools/command/build_ext.py", line 79, in run
2021-07-29T02:33:23,302       _build_ext.run(self)
2021-07-29T02:33:23,302     File "/usr/local/lib/python3.9/dist-packages/Cython/Distutils/old_build_ext.py", line 186, in run
2021-07-29T02:33:23,302       _build_ext.build_ext.run(self)
2021-07-29T02:33:23,302     File "/usr/lib/python3.9/distutils/command/build_ext.py", line 340, in run
2021-07-29T02:33:23,303       self.build_extensions()
2021-07-29T02:33:23,303     File "/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py", line 94, in build_extensions
2021-07-29T02:33:23,303       build_ext.build_extensions(self)
2021-07-29T02:33:23,304     File "/usr/local/lib/python3.9/dist-packages/Cython/Distutils/old_build_ext.py", line 195, in build_extensions
2021-07-29T02:33:23,304       _build_ext.build_ext.build_extensions(self)
2021-07-29T02:33:23,304     File "/usr/lib/python3.9/distutils/command/build_ext.py", line 449, in build_extensions
2021-07-29T02:33:23,305       self._build_extensions_serial()
2021-07-29T02:33:23,305     File "/usr/lib/python3.9/distutils/command/build_ext.py", line 474, in _build_extensions_serial
2021-07-29T02:33:23,305       self.build_extension(ext)
2021-07-29T02:33:23,306     File "/usr/local/lib/python3.9/dist-packages/setuptools/command/build_ext.py", line 202, in build_extension
2021-07-29T02:33:23,306       _build_ext.build_extension(self, ext)
2021-07-29T02:33:23,306     File "/usr/lib/python3.9/distutils/command/build_ext.py", line 529, in build_extension
2021-07-29T02:33:23,307       objects = self.compiler.compile(sources,
2021-07-29T02:33:23,307     File "/usr/lib/python3.9/distutils/ccompiler.py", line 565, in compile
2021-07-29T02:33:23,308       self._setup_compile(output_dir, macros, include_dirs, sources,
2021-07-29T02:33:23,308     File "/usr/lib/python3.9/distutils/ccompiler.py", line 341, in _setup_compile
2021-07-29T02:33:23,308       pp_opts = gen_preprocess_options(macros, incdirs)
2021-07-29T02:33:23,309     File "/usr/lib/python3.9/distutils/ccompiler.py", line 1076, in gen_preprocess_options
2021-07-29T02:33:23,310       pp_opts.append("-I%s" % dir)
2021-07-29T02:33:23,310     File "/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py", line 15, in __str__
2021-07-29T02:33:23,310       import pybind11
2021-07-29T02:33:23,310   ModuleNotFoundError: No module named 'pybind11'
2021-07-29T02:33:23,391   Building wheel for gevo (setup.py): finished with status 'error'
2021-07-29T02:33:23,392   ERROR: Failed building wheel for gevo
2021-07-29T02:33:23,392   Running setup.py clean for gevo
2021-07-29T02:33:23,393   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-p5w5xtwy/gevo_a6c1dc4f938d474aae96e6f3d8513439/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-29T02:33:24,352   running clean
2021-07-29T02:33:24,354   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-07-29T02:33:24,357   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-29T02:33:24,357   'build/scripts-3.9' does not exist -- can't clean it
2021-07-29T02:33:24,357   removing 'build'
2021-07-29T02:33:24,421 Failed to build gevo
2021-07-29T02:33:24,422 ERROR: Failed to build one or more wheels
2021-07-29T02:33:24,422 Exception information:
2021-07-29T02:33:24,422 Traceback (most recent call last):
2021-07-29T02:33:24,422   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-29T02:33:24,422     status = self.run(options, args)
2021-07-29T02:33:24,422   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-29T02:33:24,422     return func(self, options, args)
2021-07-29T02:33:24,422   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-29T02:33:24,422     raise CommandError(
2021-07-29T02:33:24,422 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-29T02:33:24,425 Removed build tracker: '/tmp/pip-req-tracker-0eb4eab0'