2021-07-29T04:37:55,729 Created temporary directory: /tmp/pip-ephem-wheel-cache-re_lllhx 2021-07-29T04:37:55,732 Created temporary directory: /tmp/pip-req-tracker-_mgejni4 2021-07-29T04:37:55,733 Initialized build tracking at /tmp/pip-req-tracker-_mgejni4 2021-07-29T04:37:55,733 Created build tracker: /tmp/pip-req-tracker-_mgejni4 2021-07-29T04:37:55,733 Entered build tracker: /tmp/pip-req-tracker-_mgejni4 2021-07-29T04:37:55,734 Created temporary directory: /tmp/pip-wheel-08kyzo0u 2021-07-29T04:37:55,765 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-29T04:37:55,766 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-29T04:37:55,766 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-29T04:37:55,766 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-29T04:37:55,767 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-29T04:37:55,769 WARNING: Location '/magine/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T04:37:55,769 WARNING: Location 't/magine/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T04:37:55,770 WARNING: Location 'm/magine/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T04:37:55,770 WARNING: Location 'p/magine/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T04:37:55,770 1 location(s) to search for versions of magine: 2021-07-29T04:37:55,770 * https://pypi.org/simple/magine/ 2021-07-29T04:37:55,771 Fetching project page and analyzing links: https://pypi.org/simple/magine/ 2021-07-29T04:37:55,771 Getting page https://pypi.org/simple/magine/ 2021-07-29T04:37:55,773 Found index url https://pypi.org/simple 2021-07-29T04:37:55,964 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/a2/78/f859fc7b5f6cfd58fe03275901b500bb923a6d18cd7428033f229c146288/MAGINE-0.0.2-py3-none-any.whl#sha256=c292ab44854e21be995e1fd9e73500f162697fa64daae5e4561ddf9f0ea3252b (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,964 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/f2/3a/72d3ea221cab6d8c0a7537dd5dace6e88abf4e412b5a91317da7b1cbe7da/MAGINE-0.0.3-py3-none-any.whl#sha256=a7e9af5f27c59303629b97aa504ad877c1977f99f081c3f3d0d5284558951b12 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,964 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/f4/19/9c245a9ebd2125f485f0d9af3285a6a5dd241f126f770c7aa0f1e4b2e9b0/MAGINE-0.0.5-py3-none-any.whl#sha256=1a1797113f967026a11c1c8b4354d0ff3265444b21020e24888f913effcebbf3 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,964 Found link https://files.pythonhosted.org/packages/18/d9/38b701e6f59358cf5d443b2f2af8091741b02345dd6c98e64e586449e082/MAGINE-0.0.5.tar.gz#sha256=dd9476eaf0895e5ac93e5f8fe4cffa08c60de2a8c5d5efc1a4d7ff396a5d9ab9 (from https://pypi.org/simple/magine/), version: 0.0.5 2021-07-29T04:37:55,965 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/4f/9d/c93dc9f644c1dbd07278f89690c10508d84589d06f739c7ed846756a9d57/MAGINE-0.0.6-py3-none-any.whl#sha256=9ffa13e8a456dc233096976adaa30a6fcf63a49f88a24305bfa431738c01c27a (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,965 Found link https://files.pythonhosted.org/packages/ea/54/1d3f5748cff723d579042b50841ebd52aeb72a3cafaacde5103b7038a55f/MAGINE-0.0.6.tar.gz#sha256=a1c80fa175ca035eba01d851a29abfa1a7849e9760051fe01b56742456c45fdf (from https://pypi.org/simple/magine/), version: 0.0.6 2021-07-29T04:37:55,965 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/f4/30/f630645a9965e87c2d0e357ed262c78d2044231c7e18a43d085a2a643b1f/MAGINE-0.0.7-py3-none-any.whl#sha256=79982a5fddaefe3762a672984ec6df76bf7c583e66d77ea84df6ea47b5935ace (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,965 Found link https://files.pythonhosted.org/packages/f6/03/105e32bcb24cf15740e7ee53faa51a10e8022e45c511e742231e66be2c18/MAGINE-0.0.7.tar.gz#sha256=0558b5ed51dd728a3bb8c89d37c8be280b04f2787f9e9ae7ca76a5d720466264 (from https://pypi.org/simple/magine/), version: 0.0.7 2021-07-29T04:37:55,966 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/8e/1e/35e4aca3017fbfe8edbbfa9896d69a70caa075ca3a82c527bd2a8a47d399/MAGINE-0.0.8-py3-none-any.whl#sha256=8cf62c54b50d932c086b698df3e7f7f2b5d770303402625951cd191bc37b6530 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,966 Found link https://files.pythonhosted.org/packages/fa/b4/15ac87165cd10e74037b3d409e2c68913adda3c04893879604bfa40f5754/MAGINE-0.0.8.tar.gz#sha256=7f85d0b52d73319aa408b6bebb1f4c67fc413d705a1789351967c33cfb50f497 (from https://pypi.org/simple/magine/), version: 0.0.8 2021-07-29T04:37:55,966 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/d4/76/96f01ff3c1d528e0aa4b90f606e26297c34bff0eb712a9a441f474b5e2ee/MAGINE-0.0.9-py3-none-any.whl#sha256=cb6dec07a3ae53eaa86ae6a73b6608f28104b1364a438467405ad685967feb51 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,967 Found link https://files.pythonhosted.org/packages/dc/91/0f380043bc22f56ae6ada696c8d6bf55b0c6af96a47011b9713717ef4e6a/MAGINE-0.0.9.tar.gz#sha256=59f64a792029cdc3b14d40f46e0471db4c964e5c974ed5c11a9d437bfb7ad78b (from https://pypi.org/simple/magine/), version: 0.0.9 2021-07-29T04:37:55,967 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/f4/95/eae8ac2a4af67be9bcab6966f749ebbcc25246e6f900487f660b615f956e/MAGINE-0.0.10-py3-none-any.whl#sha256=f114d898aefe5931a22b677a8019e39601b57c0077bec9b3444546d36e035fa1 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,967 Found link https://files.pythonhosted.org/packages/ab/78/9f66efe772b473beee68184f2fe2db81059352de8108abbd3abb7daedea8/MAGINE-0.0.10.tar.gz#sha256=7694b86e9703c232acadae953f63139339bd41bf503cfe5b7425f22ec1e68524 (from https://pypi.org/simple/magine/), version: 0.0.10 2021-07-29T04:37:55,967 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/78/12/880778895a68842b56c76e173f05b6971a52ea97f6cf6b793466cc645722/MAGINE-0.0.12-py3-none-any.whl#sha256=18fe1fbe91d14b8ffd7a6ef468e0a91f60bb8b145279ff4df8a2285f591f83e3 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,967 Found link https://files.pythonhosted.org/packages/49/b2/c23cc312e9c2df58bc563a84c0a70b425fe08d490ffb106396c97c472308/MAGINE-0.0.12.tar.gz#sha256=1e7cb1274dd108b99079cd2388ed30ccbfabb3a58c5429c717c5b2f9f6654466 (from https://pypi.org/simple/magine/), version: 0.0.12 2021-07-29T04:37:55,968 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/8a/68/4bed9f8f015667b9f871e5ea001a2997553ee45379e0d608146994d03dd9/MAGINE-0.0.13-py3-none-any.whl#sha256=03700e6aab5b6d49d9bf56937ef8e45f53edf681c996fc58e1aa6f3ab3bc47ff (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,968 Found link https://files.pythonhosted.org/packages/b1/e3/1d54a41c092797ca8bb1097414e67c35f7bd9ed6eea0e488340b347a796e/MAGINE-0.0.13.tar.gz#sha256=4c9447fec7fee6f331cdbfc4a043400edbdbacf30ab0434be81be95e8c7f50e4 (from https://pypi.org/simple/magine/), version: 0.0.13 2021-07-29T04:37:55,968 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/22/31/9687bcc479afaef80f6781967328fa84c64396cbc55f3eabeb20e5e4b5e1/MAGINE-0.0.14-py3-none-any.whl#sha256=fbd9a5f5a8472dd8eebcc28b83b8976d81fe3c2030a08129cb257922b72fa763 (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,968 Found link https://files.pythonhosted.org/packages/37/98/6fe5aa530a03bbdc696998081e1b92efbbe4a775be74df2b5d8fc96305e8/MAGINE-0.0.14.tar.gz#sha256=7dca6135efb3c838633059e3d5d25dcb9d8338b24a368ba0ba85b1e93730442a (from https://pypi.org/simple/magine/), version: 0.0.14 2021-07-29T04:37:55,969 Skipping link: No binaries permitted for magine: https://files.pythonhosted.org/packages/fa/4d/d1d370e521b1089543e3afc3b17c21e363108e239f4c9e4b1b63ddbf4a39/MAGINE-0.0.15-py3-none-any.whl#sha256=1de934c9bd8aa24047e7e61fbbedfa837dbddb4ea61f03028921ff3b2ac3b42a (from https://pypi.org/simple/magine/) 2021-07-29T04:37:55,969 Found link https://files.pythonhosted.org/packages/5b/6f/a254f2364dc7b5b7c3465d6500717e5bec70392904e3924f4bc215dd7ec8/MAGINE-0.0.15.tar.gz#sha256=ef0d3de263af2297d2fd15d69b153302ced0c996d52a7b3e82e1476fc019a20f (from https://pypi.org/simple/magine/), version: 0.0.15 2021-07-29T04:37:55,969 Found link https://files.pythonhosted.org/packages/b1/2b/998a91449688afedd286cae97a473ae2fbfe6f6cc731b15b7846c9346523/MAGINE-0.0.16.tar.gz#sha256=3f7cffb5a2349e74b99366deb92f87e1a3972ca731fbc053c35142d57e767243 (from https://pypi.org/simple/magine/), version: 0.0.16 2021-07-29T04:37:55,970 Found link https://files.pythonhosted.org/packages/a2/ff/742a4ef951b7d99338835905de5f5e1972923f523838b298f278f844c9c3/MAGINE-0.0.17.tar.gz#sha256=a7cbdcb326d672c71f8bbb2f11d354cbf3c3dc662f58872187777a8e879b4cfc (from https://pypi.org/simple/magine/), version: 0.0.17 2021-07-29T04:37:55,970 Found link https://files.pythonhosted.org/packages/6d/23/ce730967a1e7b02c2a3ef2114a97c60713a915aa7766a64ae3ebe320f39d/MAGINE-0.1.0.tar.gz#sha256=6a37ad2d358c14fed45252397ce9c92f61a53e6d6d2f64abb4b94cc884e0fc22 (from https://pypi.org/simple/magine/), version: 0.1.0 2021-07-29T04:37:55,970 Found link https://files.pythonhosted.org/packages/c3/1c/1d797050f4c28551196309e46d37b4ceb89014888cf5bf31cb4204634bbc/MAGINE-0.1.1.tar.gz#sha256=f4a6eb86a3e10e05f9d7558da61fdba19e7f1f5ac32b4a7c1730ddfdc0cbc968 (from https://pypi.org/simple/magine/), version: 0.1.1 2021-07-29T04:37:55,970 Found link https://files.pythonhosted.org/packages/ed/04/0ca36396c803a4f3225d05f719a5c822bb388dd647ee5a7fb6a32b9f6ad5/MAGINE-0.1.2.tar.gz#sha256=731649d5e107d97305c2e89012b7cd00031276b5706320b114ae3d49b183b10d (from https://pypi.org/simple/magine/), version: 0.1.2 2021-07-29T04:37:55,971 Found link https://files.pythonhosted.org/packages/d8/d8/6164eb6e21c31951425d8cc53dfff6599907c90f9e16542af2cc8825d3d9/MAGINE-0.1.3.tar.gz#sha256=3d69e85724597a6a11d7ed1a7e8b0ed2bbba2861d033a76139d6491aae12b2b5 (from https://pypi.org/simple/magine/), version: 0.1.3 2021-07-29T04:37:55,971 Found link https://files.pythonhosted.org/packages/89/10/8d524d227384dbbbfab6def9fa3dbf765e2f99d0f79cb710db149eb19d25/MAGINE-0.1.4.tar.gz#sha256=840bc51f233f8d86818534694442e0556929b46abe15f5a3012323409d63245d (from https://pypi.org/simple/magine/), version: 0.1.4 2021-07-29T04:37:55,971 Found link https://files.pythonhosted.org/packages/98/2f/ac3f24511bc074dd2ff3bf61e6a0ab16fc58f11460a7329f2b51a8df6568/MAGINE-0.1.5.tar.gz#sha256=bd669764a727ff134e1ff123199a00e1c3dc5def5cbe263abe3d02a8fea6071c (from https://pypi.org/simple/magine/), version: 0.1.5 2021-07-29T04:37:55,972 Skipping link: not a file: https://pypi.org/simple/magine/ 2021-07-29T04:37:55,992 Given no hashes to check 1 links for project 'magine': discarding no candidates 2021-07-29T04:37:56,010 Collecting magine==0.1.5 2021-07-29T04:37:56,011 Created temporary directory: /tmp/pip-unpack-zuvsu6ms 2021-07-29T04:37:56,057 Downloading MAGINE-0.1.5.tar.gz (2.7 MB) 2021-07-29T04:37:56,999 Added magine==0.1.5 from https://files.pythonhosted.org/packages/98/2f/ac3f24511bc074dd2ff3bf61e6a0ab16fc58f11460a7329f2b51a8df6568/MAGINE-0.1.5.tar.gz#sha256=bd669764a727ff134e1ff123199a00e1c3dc5def5cbe263abe3d02a8fea6071c to build tracker '/tmp/pip-req-tracker-_mgejni4' 2021-07-29T04:37:57,000 Running setup.py (path:/tmp/pip-wheel-08kyzo0u/magine_e385f63fb8aa4b7bafc00a301236d9d0/setup.py) egg_info for package magine 2021-07-29T04:37:57,000 Created temporary directory: /tmp/pip-pip-egg-info-3x629jf8 2021-07-29T04:37:57,001 Running command python setup.py egg_info 2021-07-29T04:37:57,859 running egg_info 2021-07-29T04:37:57,861 creating /tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info 2021-07-29T04:37:57,862 writing /tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/PKG-INFO 2021-07-29T04:37:57,866 writing dependency_links to /tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/dependency_links.txt 2021-07-29T04:37:57,867 writing entry points to /tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/entry_points.txt 2021-07-29T04:37:57,869 writing requirements to /tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/requires.txt 2021-07-29T04:37:57,870 writing top-level names to /tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/top_level.txt 2021-07-29T04:37:57,872 writing manifest file '/tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/SOURCES.txt' 2021-07-29T04:37:58,031 reading manifest file '/tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/SOURCES.txt' 2021-07-29T04:37:58,033 reading manifest template 'MANIFEST.in' 2021-07-29T04:37:58,035 warning: no files found matching 'magine/html_templates/*.html' 2021-07-29T04:37:58,037 warning: no files found matching 'magine/tests/Data/hilic/*' 2021-07-29T04:37:58,039 warning: no files found matching 'magine/mappings/*mapper.p' 2021-07-29T04:37:58,040 warning: no files found matching 'magine/examples/cisplatin/*.png' 2021-07-29T04:37:58,041 warning: no directories found matching 'doc' 2021-07-29T04:37:58,041 no previously-included directories found matching 'doc/_build' 2021-07-29T04:37:58,047 writing manifest file '/tmp/pip-pip-egg-info-3x629jf8/MAGINE.egg-info/SOURCES.txt' 2021-07-29T04:37:58,111 Source in /tmp/pip-wheel-08kyzo0u/magine_e385f63fb8aa4b7bafc00a301236d9d0 has version 0.1.5, which satisfies requirement magine==0.1.5 from https://files.pythonhosted.org/packages/98/2f/ac3f24511bc074dd2ff3bf61e6a0ab16fc58f11460a7329f2b51a8df6568/MAGINE-0.1.5.tar.gz#sha256=bd669764a727ff134e1ff123199a00e1c3dc5def5cbe263abe3d02a8fea6071c 2021-07-29T04:37:58,112 Removed magine==0.1.5 from https://files.pythonhosted.org/packages/98/2f/ac3f24511bc074dd2ff3bf61e6a0ab16fc58f11460a7329f2b51a8df6568/MAGINE-0.1.5.tar.gz#sha256=bd669764a727ff134e1ff123199a00e1c3dc5def5cbe263abe3d02a8fea6071c from build tracker '/tmp/pip-req-tracker-_mgejni4' 2021-07-29T04:37:58,116 Created temporary directory: /tmp/pip-unpack-_bf3jpvp 2021-07-29T04:37:58,117 Building wheels for collected packages: magine 2021-07-29T04:37:58,121 Created temporary directory: /tmp/pip-wheel-7jo23tw2 2021-07-29T04:37:58,122 Building wheel for magine (setup.py): started 2021-07-29T04:37:58,122 Destination directory: /tmp/pip-wheel-7jo23tw2 2021-07-29T04:37:58,122 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-08kyzo0u/magine_e385f63fb8aa4b7bafc00a301236d9d0/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-08kyzo0u/magine_e385f63fb8aa4b7bafc00a301236d9d0/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-7jo23tw2 2021-07-29T04:37:58,992 running bdist_wheel 2021-07-29T04:37:59,151 running build 2021-07-29T04:37:59,151 running build_py 2021-07-29T04:37:59,290 creating build 2021-07-29T04:37:59,290 creating build/lib 2021-07-29T04:37:59,291 creating build/lib/scripts 2021-07-29T04:37:59,292 copying scripts/__init__.py -> build/lib/scripts 2021-07-29T04:37:59,293 copying scripts/download_databases.py -> build/lib/scripts 2021-07-29T04:37:59,296 creating build/lib/magine 2021-07-29T04:37:59,297 copying magine/logging.py -> build/lib/magine 2021-07-29T04:37:59,299 copying magine/__init__.py -> build/lib/magine 2021-07-29T04:37:59,300 copying magine/copy_sample_dbs.py -> build/lib/magine 2021-07-29T04:37:59,303 creating build/lib/magine/mappings 2021-07-29T04:37:59,304 copying magine/mappings/__init__.py -> build/lib/magine/mappings 2021-07-29T04:37:59,305 copying magine/mappings/gene_mapper.py -> build/lib/magine/mappings 2021-07-29T04:37:59,308 copying magine/mappings/maps.py -> build/lib/magine/mappings 2021-07-29T04:37:59,309 copying magine/mappings/chemical_mapper.py -> build/lib/magine/mappings 2021-07-29T04:37:59,313 creating build/lib/magine/networks 2021-07-29T04:37:59,314 copying magine/networks/exporters.py -> build/lib/magine/networks 2021-07-29T04:37:59,316 copying magine/networks/__init__.py -> build/lib/magine/networks 2021-07-29T04:37:59,318 copying magine/networks/standards.py -> build/lib/magine/networks 2021-07-29T04:37:59,320 copying magine/networks/dev_tools.py -> build/lib/magine/networks 2021-07-29T04:37:59,323 copying magine/networks/utils.py -> build/lib/magine/networks 2021-07-29T04:37:59,326 copying magine/networks/annotated_set.py -> build/lib/magine/networks 2021-07-29T04:37:59,328 copying magine/networks/subgraphs.py -> build/lib/magine/networks 2021-07-29T04:37:59,331 copying magine/networks/network_generator.py -> build/lib/magine/networks 2021-07-29T04:37:59,334 creating build/lib/magine/data 2021-07-29T04:37:59,335 copying magine/data/base.py -> build/lib/magine/data 2021-07-29T04:37:59,338 copying magine/data/tools.py -> build/lib/magine/data 2021-07-29T04:37:59,340 copying magine/data/__init__.py -> build/lib/magine/data 2021-07-29T04:37:59,342 copying magine/data/storage.py -> build/lib/magine/data 2021-07-29T04:37:59,344 copying magine/data/experimental_data.py -> build/lib/magine/data 2021-07-29T04:37:59,348 creating build/lib/magine/enrichment 2021-07-29T04:37:59,349 copying magine/enrichment/__init__.py -> build/lib/magine/enrichment 2021-07-29T04:37:59,351 copying magine/enrichment/enrichment_result.py -> build/lib/magine/enrichment 2021-07-29T04:37:59,353 copying magine/enrichment/enrichr.py -> build/lib/magine/enrichment 2021-07-29T04:37:59,357 creating build/lib/magine/plotting 2021-07-29T04:37:59,358 copying magine/plotting/__init__.py -> build/lib/magine/plotting 2021-07-29T04:37:59,359 copying magine/plotting/species_plotting.py -> build/lib/magine/plotting 2021-07-29T04:37:59,362 copying magine/plotting/heatmaps.py -> build/lib/magine/plotting 2021-07-29T04:37:59,365 copying magine/plotting/wordcloud_tools.py -> build/lib/magine/plotting 2021-07-29T04:37:59,367 copying magine/plotting/venn_diagram_maker.py -> build/lib/magine/plotting 2021-07-29T04:37:59,369 copying magine/plotting/volcano_plots.py -> build/lib/magine/plotting 2021-07-29T04:37:59,373 creating build/lib/magine/tests 2021-07-29T04:37:59,374 copying magine/tests/test_network_subgraphs.py -> build/lib/magine/tests 2021-07-29T04:37:59,377 copying magine/tests/test_plotting.py -> build/lib/magine/tests 2021-07-29T04:37:59,379 copying magine/tests/__init__.py -> build/lib/magine/tests 2021-07-29T04:37:59,380 copying magine/tests/sample_experimental_data.py -> build/lib/magine/tests 2021-07-29T04:37:59,382 copying magine/tests/test_network_viz.py -> build/lib/magine/tests 2021-07-29T04:37:59,384 copying magine/tests/test_html_creater.py -> build/lib/magine/tests 2021-07-29T04:37:59,386 copying magine/tests/test_data_tools.py -> build/lib/magine/tests 2021-07-29T04:37:59,389 copying magine/tests/test_cytoscape_viewer.py -> build/lib/magine/tests 2021-07-29T04:37:59,391 copying magine/tests/test_database_download.py -> build/lib/magine/tests 2021-07-29T04:37:59,393 copying magine/tests/test_correlation_network.py -> build/lib/magine/tests 2021-07-29T04:37:59,394 copying magine/tests/test_network_generation.py -> build/lib/magine/tests 2021-07-29T04:37:59,396 copying magine/tests/test_annotated_network.py -> build/lib/magine/tests 2021-07-29T04:37:59,398 copying magine/tests/test_exp_data_class.py -> build/lib/magine/tests 2021-07-29T04:37:59,400 copying magine/tests/test_kgml_to_graph.py -> build/lib/magine/tests 2021-07-29T04:37:59,402 copying magine/tests/test_network_exporters.py -> build/lib/magine/tests 2021-07-29T04:37:59,404 copying magine/tests/test_network_downloads.py -> build/lib/magine/tests 2021-07-29T04:37:59,405 copying magine/tests/test_network_utils.py -> build/lib/magine/tests 2021-07-29T04:37:59,407 copying magine/tests/test_enrichment_tools.py -> build/lib/magine/tests 2021-07-29T04:37:59,409 copying magine/tests/test_id_mapping.py -> build/lib/magine/tests 2021-07-29T04:37:59,411 copying magine/tests/test_enrichr.py -> build/lib/magine/tests 2021-07-29T04:37:59,414 creating build/lib/magine/html_templates 2021-07-29T04:37:59,415 copying magine/html_templates/__init__.py -> build/lib/magine/html_templates 2021-07-29T04:37:59,416 copying magine/html_templates/html_tools.py -> build/lib/magine/html_templates 2021-07-29T04:37:59,419 creating build/lib/magine/mappings/databases 2021-07-29T04:37:59,420 copying magine/mappings/databases/__init__.py -> build/lib/magine/mappings/databases 2021-07-29T04:37:59,422 copying magine/mappings/databases/download_libraries.py -> build/lib/magine/mappings/databases 2021-07-29T04:37:59,424 copying magine/mappings/databases/update.py -> build/lib/magine/mappings/databases 2021-07-29T04:37:59,426 copying magine/mappings/databases/pubchem.py -> build/lib/magine/mappings/databases 2021-07-29T04:37:59,429 creating build/lib/magine/networks/correlation_networks 2021-07-29T04:37:59,430 copying magine/networks/correlation_networks/__init__.py -> build/lib/magine/networks/correlation_networks 2021-07-29T04:37:59,431 copying magine/networks/correlation_networks/calculate_correlation_network.py -> build/lib/magine/networks/correlation_networks 2021-07-29T04:37:59,435 creating build/lib/magine/networks/databases 2021-07-29T04:37:59,436 copying magine/networks/databases/__init__.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,438 copying magine/networks/databases/reactome_functional_interaction.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,440 copying magine/networks/databases/update.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,443 copying magine/networks/databases/trrust.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,445 copying magine/networks/databases/kegg_kgml.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,447 copying magine/networks/databases/hmdb.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,449 copying magine/networks/databases/signor.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,451 copying magine/networks/databases/biogrid_interactions.py -> build/lib/magine/networks/databases 2021-07-29T04:37:59,455 creating build/lib/magine/networks/visualization 2021-07-29T04:37:59,456 copying magine/networks/visualization/graphviz.py -> build/lib/magine/networks/visualization 2021-07-29T04:37:59,458 copying magine/networks/visualization/cytoscape.py -> build/lib/magine/networks/visualization 2021-07-29T04:37:59,461 copying magine/networks/visualization/__init__.py -> build/lib/magine/networks/visualization 2021-07-29T04:37:59,463 copying magine/networks/visualization/mpl.py -> build/lib/magine/networks/visualization 2021-07-29T04:37:59,465 copying magine/networks/visualization/igraph_viz.py -> build/lib/magine/networks/visualization 2021-07-29T04:37:59,469 creating build/lib/magine/networks/visualization/notebooks 2021-07-29T04:37:59,470 copying magine/networks/visualization/notebooks/cyjs_options.py -> build/lib/magine/networks/visualization/notebooks 2021-07-29T04:37:59,472 copying magine/networks/visualization/notebooks/__init__.py -> build/lib/magine/networks/visualization/notebooks 2021-07-29T04:37:59,474 copying magine/networks/visualization/notebooks/view.py -> build/lib/magine/networks/visualization/notebooks 2021-07-29T04:37:59,476 creating build/lib/magine/enrichment/deprecated 2021-07-29T04:37:59,477 copying magine/enrichment/deprecated/__init__.py -> build/lib/magine/enrichment/deprecated 2021-07-29T04:37:59,479 copying magine/enrichment/deprecated/test_ontology_tools.py -> build/lib/magine/enrichment/deprecated 2021-07-29T04:37:59,481 copying magine/enrichment/deprecated/ontology_tools.py -> build/lib/magine/enrichment/deprecated 2021-07-29T04:37:59,484 copying magine/enrichment/deprecated/ontology_analysis.py -> build/lib/magine/enrichment/deprecated 2021-07-29T04:37:59,488 creating build/lib/magine/enrichment/deprecated/databases 2021-07-29T04:37:59,489 copying magine/enrichment/deprecated/databases/__init__.py -> build/lib/magine/enrichment/deprecated/databases 2021-07-29T04:37:59,491 copying magine/enrichment/deprecated/databases/gene_ontology.py -> build/lib/magine/enrichment/deprecated/databases 2021-07-29T04:37:59,493 running egg_info 2021-07-29T04:37:59,507 writing MAGINE.egg-info/PKG-INFO 2021-07-29T04:37:59,509 writing dependency_links to MAGINE.egg-info/dependency_links.txt 2021-07-29T04:37:59,511 writing entry points to MAGINE.egg-info/entry_points.txt 2021-07-29T04:37:59,512 writing requirements to MAGINE.egg-info/requires.txt 2021-07-29T04:37:59,513 writing top-level names to MAGINE.egg-info/top_level.txt 2021-07-29T04:37:59,530 reading manifest file 'MAGINE.egg-info/SOURCES.txt' 2021-07-29T04:37:59,534 reading manifest template 'MANIFEST.in' 2021-07-29T04:37:59,536 warning: no files found matching 'magine/html_templates/*.html' 2021-07-29T04:37:59,538 warning: no files found matching 'magine/tests/Data/hilic/*' 2021-07-29T04:37:59,540 warning: no files found matching 'magine/mappings/*mapper.p' 2021-07-29T04:37:59,540 warning: no files found matching 'magine/examples/cisplatin/*.png' 2021-07-29T04:37:59,541 warning: no directories found matching 'doc' 2021-07-29T04:37:59,542 no previously-included directories found matching 'doc/_build' 2021-07-29T04:37:59,549 writing manifest file 'MAGINE.egg-info/SOURCES.txt' 2021-07-29T04:37:59,556 copying scripts/create_template_project -> build/lib/scripts 2021-07-29T04:37:59,558 copying magine/enrichment/_valid_enricher_libs.txt -> build/lib/magine/enrichment 2021-07-29T04:37:59,560 creating build/lib/magine/tests/Data 2021-07-29T04:37:59,561 copying magine/tests/Data/enrichr_test_enrichr.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,564 copying magine/tests/Data/example_apoptosis.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,566 copying magine/tests/Data/large_example.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,590 copying magine/tests/Data/proteomics_up_enrichment_array.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,602 copying magine/tests/Data/reformatted_data.csv.gz -> build/lib/magine/tests/Data 2021-07-29T04:37:59,630 copying magine/tests/Data/subset_data.py -> build/lib/magine/tests/Data 2021-07-29T04:37:59,634 copying magine/tests/Data/test_data.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,708 copying magine/tests/Data/test_df_all_data.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,760 copying magine/tests/Data/test_proteomics_up_all_data.csv -> build/lib/magine/tests/Data 2021-07-29T04:37:59,774 creating build/lib/magine/tests/KEGG 2021-07-29T04:37:59,775 copying magine/tests/KEGG/hsa04071.xml -> build/lib/magine/tests/KEGG 2021-07-29T04:37:59,778 creating build/lib/magine/tests/Network_files 2021-07-29T04:37:59,779 copying magine/tests/Network_files/sample_network.gml -> build/lib/magine/tests/Network_files 2021-07-29T04:37:59,819 copying magine/tests/Network_files/t_1_2_colored_enrichment.graphml -> build/lib/magine/tests/Network_files 2021-07-29T04:37:59,823 copying magine/tests/Network_files/test_all_colored_enrichment.graphml -> build/lib/magine/tests/Network_files 2021-07-29T04:37:59,827 creating build/lib/magine/html_templates/templates 2021-07-29T04:37:59,827 copying magine/html_templates/templates/base.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,829 copying magine/html_templates/templates/filter_table.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,832 copying magine/html_templates/templates/main_view.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,834 copying magine/html_templates/templates/plotly_template.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,836 copying magine/html_templates/templates/single_table_view.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,838 copying magine/html_templates/templates/subgraph.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,841 copying magine/html_templates/templates/subgraph_2.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,844 copying magine/html_templates/templates/subgraph_3.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,846 copying magine/html_templates/templates/workflow_template.html -> build/lib/magine/html_templates/templates 2021-07-29T04:37:59,860 running build_scripts 2021-07-29T04:37:59,860 creating build/scripts-3.9 2021-07-29T04:37:59,861 copying and adjusting scripts/create_template_project -> build/scripts-3.9 2021-07-29T04:37:59,863 copying and adjusting scripts/download_databases.py -> build/scripts-3.9 2021-07-29T04:37:59,864 changing mode of build/scripts-3.9/create_template_project from 644 to 755 2021-07-29T04:37:59,865 changing mode of build/scripts-3.9/download_databases.py from 644 to 755 2021-07-29T04:37:59,870 installing to build/bdist.linux-armv7l/wheel 2021-07-29T04:37:59,870 running install 2021-07-29T04:37:59,871 running install_lib 2021-07-29T04:37:59,875 creating build/bdist.linux-armv7l 2021-07-29T04:37:59,875 creating build/bdist.linux-armv7l/wheel 2021-07-29T04:37:59,877 creating build/bdist.linux-armv7l/wheel/scripts 2021-07-29T04:37:59,878 copying build/lib/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scripts 2021-07-29T04:37:59,879 copying build/lib/scripts/download_databases.py -> build/bdist.linux-armv7l/wheel/scripts 2021-07-29T04:37:59,881 copying build/lib/scripts/create_template_project -> build/bdist.linux-armv7l/wheel/scripts 2021-07-29T04:37:59,884 creating build/bdist.linux-armv7l/wheel/magine 2021-07-29T04:37:59,885 copying build/lib/magine/logging.py -> build/bdist.linux-armv7l/wheel/magine 2021-07-29T04:37:59,888 creating build/bdist.linux-armv7l/wheel/magine/mappings 2021-07-29T04:37:59,888 copying build/lib/magine/mappings/__init__.py -> build/bdist.linux-armv7l/wheel/magine/mappings 2021-07-29T04:37:59,890 copying build/lib/magine/mappings/gene_mapper.py -> build/bdist.linux-armv7l/wheel/magine/mappings 2021-07-29T04:37:59,893 copying build/lib/magine/mappings/maps.py -> build/bdist.linux-armv7l/wheel/magine/mappings 2021-07-29T04:37:59,896 creating build/bdist.linux-armv7l/wheel/magine/mappings/databases 2021-07-29T04:37:59,897 copying build/lib/magine/mappings/databases/__init__.py -> build/bdist.linux-armv7l/wheel/magine/mappings/databases 2021-07-29T04:37:59,899 copying build/lib/magine/mappings/databases/download_libraries.py -> build/bdist.linux-armv7l/wheel/magine/mappings/databases 2021-07-29T04:37:59,902 copying build/lib/magine/mappings/databases/update.py -> build/bdist.linux-armv7l/wheel/magine/mappings/databases 2021-07-29T04:37:59,904 copying build/lib/magine/mappings/databases/pubchem.py -> build/bdist.linux-armv7l/wheel/magine/mappings/databases 2021-07-29T04:37:59,906 copying build/lib/magine/mappings/chemical_mapper.py -> build/bdist.linux-armv7l/wheel/magine/mappings 2021-07-29T04:37:59,909 copying build/lib/magine/__init__.py -> build/bdist.linux-armv7l/wheel/magine 2021-07-29T04:37:59,911 creating build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,912 copying build/lib/magine/networks/exporters.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,915 copying build/lib/magine/networks/__init__.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,917 copying build/lib/magine/networks/standards.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,919 copying build/lib/magine/networks/dev_tools.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,922 creating build/bdist.linux-armv7l/wheel/magine/networks/correlation_networks 2021-07-29T04:37:59,923 copying build/lib/magine/networks/correlation_networks/__init__.py -> build/bdist.linux-armv7l/wheel/magine/networks/correlation_networks 2021-07-29T04:37:59,924 copying build/lib/magine/networks/correlation_networks/calculate_correlation_network.py -> build/bdist.linux-armv7l/wheel/magine/networks/correlation_networks 2021-07-29T04:37:59,927 copying build/lib/magine/networks/utils.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,930 creating build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,932 copying build/lib/magine/networks/databases/__init__.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,934 copying build/lib/magine/networks/databases/reactome_functional_interaction.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,936 copying build/lib/magine/networks/databases/update.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,938 copying build/lib/magine/networks/databases/trrust.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,940 copying build/lib/magine/networks/databases/kegg_kgml.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,943 copying build/lib/magine/networks/databases/hmdb.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,945 copying build/lib/magine/networks/databases/signor.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,947 copying build/lib/magine/networks/databases/biogrid_interactions.py -> build/bdist.linux-armv7l/wheel/magine/networks/databases 2021-07-29T04:37:59,950 creating build/bdist.linux-armv7l/wheel/magine/networks/visualization 2021-07-29T04:37:59,952 copying build/lib/magine/networks/visualization/graphviz.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization 2021-07-29T04:37:59,954 copying build/lib/magine/networks/visualization/cytoscape.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization 2021-07-29T04:37:59,957 copying build/lib/magine/networks/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization 2021-07-29T04:37:59,959 copying build/lib/magine/networks/visualization/mpl.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization 2021-07-29T04:37:59,962 copying build/lib/magine/networks/visualization/igraph_viz.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization 2021-07-29T04:37:59,965 creating build/bdist.linux-armv7l/wheel/magine/networks/visualization/notebooks 2021-07-29T04:37:59,966 copying build/lib/magine/networks/visualization/notebooks/cyjs_options.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization/notebooks 2021-07-29T04:37:59,968 copying build/lib/magine/networks/visualization/notebooks/__init__.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization/notebooks 2021-07-29T04:37:59,971 copying build/lib/magine/networks/visualization/notebooks/view.py -> build/bdist.linux-armv7l/wheel/magine/networks/visualization/notebooks 2021-07-29T04:37:59,973 copying build/lib/magine/networks/annotated_set.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,976 copying build/lib/magine/networks/subgraphs.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,979 copying build/lib/magine/networks/network_generator.py -> build/bdist.linux-armv7l/wheel/magine/networks 2021-07-29T04:37:59,983 creating build/bdist.linux-armv7l/wheel/magine/data 2021-07-29T04:37:59,984 copying build/lib/magine/data/base.py -> build/bdist.linux-armv7l/wheel/magine/data 2021-07-29T04:37:59,987 copying build/lib/magine/data/tools.py -> build/bdist.linux-armv7l/wheel/magine/data 2021-07-29T04:37:59,989 copying build/lib/magine/data/__init__.py -> build/bdist.linux-armv7l/wheel/magine/data 2021-07-29T04:37:59,991 copying build/lib/magine/data/storage.py -> build/bdist.linux-armv7l/wheel/magine/data 2021-07-29T04:37:59,993 copying build/lib/magine/data/experimental_data.py -> build/bdist.linux-armv7l/wheel/magine/data 2021-07-29T04:37:59,997 creating build/bdist.linux-armv7l/wheel/magine/enrichment 2021-07-29T04:37:59,998 copying build/lib/magine/enrichment/__init__.py -> build/bdist.linux-armv7l/wheel/magine/enrichment 2021-07-29T04:38:00,001 copying build/lib/magine/enrichment/_valid_enricher_libs.txt -> build/bdist.linux-armv7l/wheel/magine/enrichment 2021-07-29T04:38:00,004 creating build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated 2021-07-29T04:38:00,004 copying build/lib/magine/enrichment/deprecated/__init__.py -> build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated 2021-07-29T04:38:00,006 copying build/lib/magine/enrichment/deprecated/test_ontology_tools.py -> build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated 2021-07-29T04:38:00,009 creating build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated/databases 2021-07-29T04:38:00,010 copying build/lib/magine/enrichment/deprecated/databases/__init__.py -> build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated/databases 2021-07-29T04:38:00,012 copying build/lib/magine/enrichment/deprecated/databases/gene_ontology.py -> build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated/databases 2021-07-29T04:38:00,015 copying build/lib/magine/enrichment/deprecated/ontology_tools.py -> build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated 2021-07-29T04:38:00,018 copying build/lib/magine/enrichment/deprecated/ontology_analysis.py -> build/bdist.linux-armv7l/wheel/magine/enrichment/deprecated 2021-07-29T04:38:00,022 copying build/lib/magine/enrichment/enrichment_result.py -> build/bdist.linux-armv7l/wheel/magine/enrichment 2021-07-29T04:38:00,024 copying build/lib/magine/enrichment/enrichr.py -> build/bdist.linux-armv7l/wheel/magine/enrichment 2021-07-29T04:38:00,028 creating build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,029 copying build/lib/magine/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,031 copying build/lib/magine/plotting/species_plotting.py -> build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,034 copying build/lib/magine/plotting/heatmaps.py -> build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,039 copying build/lib/magine/plotting/wordcloud_tools.py -> build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,045 copying build/lib/magine/plotting/venn_diagram_maker.py -> build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,049 copying build/lib/magine/plotting/volcano_plots.py -> build/bdist.linux-armv7l/wheel/magine/plotting 2021-07-29T04:38:00,052 copying build/lib/magine/copy_sample_dbs.py -> build/bdist.linux-armv7l/wheel/magine 2021-07-29T04:38:00,055 creating build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,056 copying build/lib/magine/tests/test_network_subgraphs.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,059 copying build/lib/magine/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,062 copying build/lib/magine/tests/__init__.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,064 copying build/lib/magine/tests/sample_experimental_data.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,066 copying build/lib/magine/tests/test_network_viz.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,073 copying build/lib/magine/tests/test_html_creater.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,076 copying build/lib/magine/tests/test_data_tools.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,079 copying build/lib/magine/tests/test_cytoscape_viewer.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,081 copying build/lib/magine/tests/test_database_download.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,084 creating build/bdist.linux-armv7l/wheel/magine/tests/KEGG 2021-07-29T04:38:00,085 copying build/lib/magine/tests/KEGG/hsa04071.xml -> build/bdist.linux-armv7l/wheel/magine/tests/KEGG 2021-07-29T04:38:00,089 copying build/lib/magine/tests/test_correlation_network.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,091 copying build/lib/magine/tests/test_network_generation.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,093 copying build/lib/magine/tests/test_annotated_network.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,096 creating build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,097 copying build/lib/magine/tests/Data/example_apoptosis.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,099 copying build/lib/magine/tests/Data/test_df_all_data.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,148 copying build/lib/magine/tests/Data/enrichr_test_enrichr.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,150 copying build/lib/magine/tests/Data/large_example.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,180 copying build/lib/magine/tests/Data/reformatted_data.csv.gz -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,206 copying build/lib/magine/tests/Data/test_data.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,270 copying build/lib/magine/tests/Data/proteomics_up_enrichment_array.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,281 copying build/lib/magine/tests/Data/subset_data.py -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,283 copying build/lib/magine/tests/Data/test_proteomics_up_all_data.csv -> build/bdist.linux-armv7l/wheel/magine/tests/Data 2021-07-29T04:38:00,297 copying build/lib/magine/tests/test_exp_data_class.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,300 copying build/lib/magine/tests/test_kgml_to_graph.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,302 copying build/lib/magine/tests/test_network_exporters.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,304 copying build/lib/magine/tests/test_network_downloads.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,306 copying build/lib/magine/tests/test_network_utils.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,307 copying build/lib/magine/tests/test_enrichment_tools.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,310 creating build/bdist.linux-armv7l/wheel/magine/tests/Network_files 2021-07-29T04:38:00,312 copying build/lib/magine/tests/Network_files/t_1_2_colored_enrichment.graphml -> build/bdist.linux-armv7l/wheel/magine/tests/Network_files 2021-07-29T04:38:00,316 copying build/lib/magine/tests/Network_files/sample_network.gml -> build/bdist.linux-armv7l/wheel/magine/tests/Network_files 2021-07-29T04:38:00,359 copying build/lib/magine/tests/Network_files/test_all_colored_enrichment.graphml -> build/bdist.linux-armv7l/wheel/magine/tests/Network_files 2021-07-29T04:38:00,363 copying build/lib/magine/tests/test_id_mapping.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,364 copying build/lib/magine/tests/test_enrichr.py -> build/bdist.linux-armv7l/wheel/magine/tests 2021-07-29T04:38:00,367 creating build/bdist.linux-armv7l/wheel/magine/html_templates 2021-07-29T04:38:00,367 copying build/lib/magine/html_templates/__init__.py -> build/bdist.linux-armv7l/wheel/magine/html_templates 2021-07-29T04:38:00,369 copying build/lib/magine/html_templates/html_tools.py -> build/bdist.linux-armv7l/wheel/magine/html_templates 2021-07-29T04:38:00,372 creating build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,373 copying build/lib/magine/html_templates/templates/subgraph_2.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,375 copying build/lib/magine/html_templates/templates/filter_table.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,377 copying build/lib/magine/html_templates/templates/workflow_template.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,379 copying build/lib/magine/html_templates/templates/main_view.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,381 copying build/lib/magine/html_templates/templates/plotly_template.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,383 copying build/lib/magine/html_templates/templates/subgraph.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,385 copying build/lib/magine/html_templates/templates/subgraph_3.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,388 copying build/lib/magine/html_templates/templates/base.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,390 copying build/lib/magine/html_templates/templates/single_table_view.html -> build/bdist.linux-armv7l/wheel/magine/html_templates/templates 2021-07-29T04:38:00,391 running install_egg_info 2021-07-29T04:38:00,400 Copying MAGINE.egg-info to build/bdist.linux-armv7l/wheel/MAGINE-0.1.5-py3.9.egg-info 2021-07-29T04:38:00,414 running install_scripts 2021-07-29T04:38:00,474 creating build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.data 2021-07-29T04:38:00,474 creating build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.data/scripts 2021-07-29T04:38:00,475 copying build/scripts-3.9/download_databases.py -> build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.data/scripts 2021-07-29T04:38:00,477 copying build/scripts-3.9/create_template_project -> build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.data/scripts 2021-07-29T04:38:00,479 changing mode of build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.data/scripts/download_databases.py to 755 2021-07-29T04:38:00,479 changing mode of build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.data/scripts/create_template_project to 755 2021-07-29T04:38:00,523 creating build/bdist.linux-armv7l/wheel/MAGINE-0.1.5.dist-info/WHEEL 2021-07-29T04:38:00,525 creating '/tmp/pip-wheel-7jo23tw2/MAGINE-0.1.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-29T04:38:00,528 adding 'MAGINE-0.1.5.data/scripts/create_template_project' 2021-07-29T04:38:00,529 adding 'MAGINE-0.1.5.data/scripts/download_databases.py' 2021-07-29T04:38:00,533 adding 'magine/__init__.py' 2021-07-29T04:38:00,534 adding 'magine/copy_sample_dbs.py' 2021-07-29T04:38:00,536 adding 'magine/logging.py' 2021-07-29T04:38:00,538 adding 'magine/data/__init__.py' 2021-07-29T04:38:00,540 adding 'magine/data/base.py' 2021-07-29T04:38:00,543 adding 'magine/data/experimental_data.py' 2021-07-29T04:38:00,545 adding 'magine/data/storage.py' 2021-07-29T04:38:00,546 adding 'magine/data/tools.py' 2021-07-29T04:38:00,548 adding 'magine/enrichment/__init__.py' 2021-07-29T04:38:00,549 adding 'magine/enrichment/_valid_enricher_libs.txt' 2021-07-29T04:38:00,552 adding 'magine/enrichment/enrichment_result.py' 2021-07-29T04:38:00,555 adding 'magine/enrichment/enrichr.py' 2021-07-29T04:38:00,557 adding 'magine/enrichment/deprecated/__init__.py' 2021-07-29T04:38:00,561 adding 'magine/enrichment/deprecated/ontology_analysis.py' 2021-07-29T04:38:00,564 adding 'magine/enrichment/deprecated/ontology_tools.py' 2021-07-29T04:38:00,565 adding 'magine/enrichment/deprecated/test_ontology_tools.py' 2021-07-29T04:38:00,567 adding 'magine/enrichment/deprecated/databases/__init__.py' 2021-07-29T04:38:00,568 adding 'magine/enrichment/deprecated/databases/gene_ontology.py' 2021-07-29T04:38:00,570 adding 'magine/html_templates/__init__.py' 2021-07-29T04:38:00,571 adding 'magine/html_templates/html_tools.py' 2021-07-29T04:38:00,574 adding 'magine/html_templates/templates/base.html' 2021-07-29T04:38:00,575 adding 'magine/html_templates/templates/filter_table.html' 2021-07-29T04:38:00,577 adding 'magine/html_templates/templates/main_view.html' 2021-07-29T04:38:00,578 adding 'magine/html_templates/templates/plotly_template.html' 2021-07-29T04:38:00,579 adding 'magine/html_templates/templates/single_table_view.html' 2021-07-29T04:38:00,580 adding 'magine/html_templates/templates/subgraph.html' 2021-07-29T04:38:00,582 adding 'magine/html_templates/templates/subgraph_2.html' 2021-07-29T04:38:00,583 adding 'magine/html_templates/templates/subgraph_3.html' 2021-07-29T04:38:00,585 adding 'magine/html_templates/templates/workflow_template.html' 2021-07-29T04:38:00,587 adding 'magine/mappings/__init__.py' 2021-07-29T04:38:00,588 adding 'magine/mappings/chemical_mapper.py' 2021-07-29T04:38:00,590 adding 'magine/mappings/gene_mapper.py' 2021-07-29T04:38:00,592 adding 'magine/mappings/maps.py' 2021-07-29T04:38:00,593 adding 'magine/mappings/databases/__init__.py' 2021-07-29T04:38:00,596 adding 'magine/mappings/databases/download_libraries.py' 2021-07-29T04:38:00,597 adding 'magine/mappings/databases/pubchem.py' 2021-07-29T04:38:00,598 adding 'magine/mappings/databases/update.py' 2021-07-29T04:38:00,600 adding 'magine/networks/__init__.py' 2021-07-29T04:38:00,602 adding 'magine/networks/annotated_set.py' 2021-07-29T04:38:00,604 adding 'magine/networks/dev_tools.py' 2021-07-29T04:38:00,605 adding 'magine/networks/exporters.py' 2021-07-29T04:38:00,607 adding 'magine/networks/network_generator.py' 2021-07-29T04:38:00,608 adding 'magine/networks/standards.py' 2021-07-29T04:38:00,611 adding 'magine/networks/subgraphs.py' 2021-07-29T04:38:00,613 adding 'magine/networks/utils.py' 2021-07-29T04:38:00,615 adding 'magine/networks/correlation_networks/__init__.py' 2021-07-29T04:38:00,617 adding 'magine/networks/correlation_networks/calculate_correlation_network.py' 2021-07-29T04:38:00,619 adding 'magine/networks/databases/__init__.py' 2021-07-29T04:38:00,620 adding 'magine/networks/databases/biogrid_interactions.py' 2021-07-29T04:38:00,622 adding 'magine/networks/databases/hmdb.py' 2021-07-29T04:38:00,623 adding 'magine/networks/databases/kegg_kgml.py' 2021-07-29T04:38:00,625 adding 'magine/networks/databases/reactome_functional_interaction.py' 2021-07-29T04:38:00,626 adding 'magine/networks/databases/signor.py' 2021-07-29T04:38:00,628 adding 'magine/networks/databases/trrust.py' 2021-07-29T04:38:00,629 adding 'magine/networks/databases/update.py' 2021-07-29T04:38:00,630 adding 'magine/networks/visualization/__init__.py' 2021-07-29T04:38:00,633 adding 'magine/networks/visualization/cytoscape.py' 2021-07-29T04:38:00,635 adding 'magine/networks/visualization/graphviz.py' 2021-07-29T04:38:00,637 adding 'magine/networks/visualization/igraph_viz.py' 2021-07-29T04:38:00,638 adding 'magine/networks/visualization/mpl.py' 2021-07-29T04:38:00,640 adding 'magine/networks/visualization/notebooks/__init__.py' 2021-07-29T04:38:00,641 adding 'magine/networks/visualization/notebooks/cyjs_options.py' 2021-07-29T04:38:00,642 adding 'magine/networks/visualization/notebooks/view.py' 2021-07-29T04:38:00,644 adding 'magine/plotting/__init__.py' 2021-07-29T04:38:00,646 adding 'magine/plotting/heatmaps.py' 2021-07-29T04:38:00,649 adding 'magine/plotting/species_plotting.py' 2021-07-29T04:38:00,650 adding 'magine/plotting/venn_diagram_maker.py' 2021-07-29T04:38:00,652 adding 'magine/plotting/volcano_plots.py' 2021-07-29T04:38:00,653 adding 'magine/plotting/wordcloud_tools.py' 2021-07-29T04:38:00,655 adding 'magine/tests/__init__.py' 2021-07-29T04:38:00,656 adding 'magine/tests/sample_experimental_data.py' 2021-07-29T04:38:00,658 adding 'magine/tests/test_annotated_network.py' 2021-07-29T04:38:00,659 adding 'magine/tests/test_correlation_network.py' 2021-07-29T04:38:00,660 adding 'magine/tests/test_cytoscape_viewer.py' 2021-07-29T04:38:00,661 adding 'magine/tests/test_data_tools.py' 2021-07-29T04:38:00,662 adding 'magine/tests/test_database_download.py' 2021-07-29T04:38:00,664 adding 'magine/tests/test_enrichment_tools.py' 2021-07-29T04:38:00,665 adding 'magine/tests/test_enrichr.py' 2021-07-29T04:38:00,666 adding 'magine/tests/test_exp_data_class.py' 2021-07-29T04:38:00,667 adding 'magine/tests/test_html_creater.py' 2021-07-29T04:38:00,669 adding 'magine/tests/test_id_mapping.py' 2021-07-29T04:38:00,670 adding 'magine/tests/test_kgml_to_graph.py' 2021-07-29T04:38:00,671 adding 'magine/tests/test_network_downloads.py' 2021-07-29T04:38:00,672 adding 'magine/tests/test_network_exporters.py' 2021-07-29T04:38:00,673 adding 'magine/tests/test_network_generation.py' 2021-07-29T04:38:00,675 adding 'magine/tests/test_network_subgraphs.py' 2021-07-29T04:38:00,677 adding 'magine/tests/test_network_utils.py' 2021-07-29T04:38:00,678 adding 'magine/tests/test_network_viz.py' 2021-07-29T04:38:00,679 adding 'magine/tests/test_plotting.py' 2021-07-29T04:38:00,683 adding 'magine/tests/Data/enrichr_test_enrichr.csv' 2021-07-29T04:38:00,684 adding 'magine/tests/Data/example_apoptosis.csv' 2021-07-29T04:38:00,776 adding 'magine/tests/Data/large_example.csv' 2021-07-29T04:38:00,830 adding 'magine/tests/Data/proteomics_up_enrichment_array.csv' 2021-07-29T04:38:00,950 adding 'magine/tests/Data/reformatted_data.csv.gz' 2021-07-29T04:38:00,960 adding 'magine/tests/Data/subset_data.py' 2021-07-29T04:38:01,282 adding 'magine/tests/Data/test_data.csv' 2021-07-29T04:38:01,564 adding 'magine/tests/Data/test_df_all_data.csv' 2021-07-29T04:38:01,626 adding 'magine/tests/Data/test_proteomics_up_all_data.csv' 2021-07-29T04:38:01,633 adding 'magine/tests/KEGG/hsa04071.xml' 2021-07-29T04:38:01,707 adding 'magine/tests/Network_files/sample_network.gml' 2021-07-29T04:38:01,723 adding 'magine/tests/Network_files/t_1_2_colored_enrichment.graphml' 2021-07-29T04:38:01,728 adding 'magine/tests/Network_files/test_all_colored_enrichment.graphml' 2021-07-29T04:38:01,730 adding 'scripts/__init__.py' 2021-07-29T04:38:01,731 adding 'scripts/create_template_project' 2021-07-29T04:38:01,732 adding 'scripts/download_databases.py' 2021-07-29T04:38:01,733 adding 'MAGINE-0.1.5.dist-info/METADATA' 2021-07-29T04:38:01,734 adding 'MAGINE-0.1.5.dist-info/WHEEL' 2021-07-29T04:38:01,735 adding 'MAGINE-0.1.5.dist-info/entry_points.txt' 2021-07-29T04:38:01,736 adding 'MAGINE-0.1.5.dist-info/top_level.txt' 2021-07-29T04:38:01,738 adding 'MAGINE-0.1.5.dist-info/RECORD' 2021-07-29T04:38:01,779 removing build/bdist.linux-armv7l/wheel 2021-07-29T04:38:01,912 Building wheel for magine (setup.py): finished with status 'done' 2021-07-29T04:38:01,949 Created wheel for magine: filename=MAGINE-0.1.5-py3-none-any.whl size=2721320 sha256=383a2f735317b4e9feaece9a5bc5db09cc3c1e63a0a069b97b5c40bae4f74729 2021-07-29T04:38:01,950 Stored in directory: /tmp/pip-ephem-wheel-cache-re_lllhx/wheels/c7/58/b6/ef3662394cedb611aebcb6ce120a7a3be1f0eb369a1a235847 2021-07-29T04:38:01,963 Successfully built magine 2021-07-29T04:38:02,052 Removed build tracker: '/tmp/pip-req-tracker-_mgejni4'