2021-07-29T05:14:31,465 Created temporary directory: /tmp/pip-ephem-wheel-cache-ztqfvnki
2021-07-29T05:14:31,468 Created temporary directory: /tmp/pip-req-tracker-r58s503i
2021-07-29T05:14:31,468 Initialized build tracking at /tmp/pip-req-tracker-r58s503i
2021-07-29T05:14:31,468 Created build tracker: /tmp/pip-req-tracker-r58s503i
2021-07-29T05:14:31,468 Entered build tracker: /tmp/pip-req-tracker-r58s503i
2021-07-29T05:14:31,469 Created temporary directory: /tmp/pip-wheel-6duej0xk
2021-07-29T05:14:31,500 WARNING: The index url "/" seems invalid, please provide a scheme.
2021-07-29T05:14:31,500 WARNING: The index url "t" seems invalid, please provide a scheme.
2021-07-29T05:14:31,500 WARNING: The index url "m" seems invalid, please provide a scheme.
2021-07-29T05:14:31,501 WARNING: The index url "p" seems invalid, please provide a scheme.
2021-07-29T05:14:31,501 Looking in indexes: https://pypi.org/simple, /, t, m, p
2021-07-29T05:14:31,503 WARNING: Location '/tobias/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T05:14:31,504 WARNING: Location 't/tobias/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T05:14:31,504 WARNING: Location 'm/tobias/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T05:14:31,504 WARNING: Location 'p/tobias/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T05:14:31,505 1 location(s) to search for versions of tobias:
2021-07-29T05:14:31,505 * https://pypi.org/simple/tobias/
2021-07-29T05:14:31,505 Fetching project page and analyzing links: https://pypi.org/simple/tobias/
2021-07-29T05:14:31,506 Getting page https://pypi.org/simple/tobias/
2021-07-29T05:14:31,507 Found index url https://pypi.org/simple
2021-07-29T05:14:31,739   Found link https://files.pythonhosted.org/packages/7f/1f/035e1cb139b520e17d79c316d2701a29485bacc6bb5374f9d1705f4225fb/tobias-0.3.0.tar.gz#sha256=7c7de1efc97352b6fb7bc21a692c901dc7a8ab270a850445577ae1aa4155d0fc (from https://pypi.org/simple/tobias/), version: 0.3.0
2021-07-29T05:14:31,740   Found link https://files.pythonhosted.org/packages/d8/ba/f414832512ca0971e304a625161ee0ad3de3c93315e48901b80a5eedc8d7/tobias-0.4.0.tar.gz#sha256=995d28dfb4d441bf28c009dcd83c28da0084ccc6ea9ff60afadd42d3da54a30c (from https://pypi.org/simple/tobias/), version: 0.4.0
2021-07-29T05:14:31,740   Found link https://files.pythonhosted.org/packages/d9/57/1debedf1e3be79b3a9789b4317f1091641b106da85b5961b5698bc8cda8e/tobias-0.5.0.tar.gz#sha256=ae14018c6992c6e8f415e142ee8bbcb3b0932927203fe2061a6ac87169631fef (from https://pypi.org/simple/tobias/), version: 0.5.0
2021-07-29T05:14:31,741   Found link https://files.pythonhosted.org/packages/d6/27/96ececd4d286730468a91951f620d711dd66268a9116b1576961d7a5fe47/tobias-0.5.1.tar.gz#sha256=cba810798019ae3ae0115653edc772538ce29003ea59f3c62bb840f385d246fa (from https://pypi.org/simple/tobias/), version: 0.5.1
2021-07-29T05:14:31,741   Found link https://files.pythonhosted.org/packages/c9/00/173069a1d9f0d2b35d7fb16917a258a92d909947725fe63f39ab23bc7e85/tobias-0.5.2.tar.gz#sha256=2253b48436a3d13a8089a31909b05e3c953505b7e0f5766031c6f0564cc70f3f (from https://pypi.org/simple/tobias/), version: 0.5.2
2021-07-29T05:14:31,741   Found link https://files.pythonhosted.org/packages/81/07/d837f4cbcb999962fd732c65068f89d083259d86e4d3e80aa84034ce9dfe/tobias-0.6.0.tar.gz#sha256=eb29c1782be7ff7fa9a39050ddeb9e531f98ac491c604e42f636d498e7b7800b (from https://pypi.org/simple/tobias/), version: 0.6.0
2021-07-29T05:14:31,741   Found link https://files.pythonhosted.org/packages/03/42/bbe7e94a468a3069d0bd984b47d02c2213bc27600b50238cf48477ba923c/tobias-0.6.1.tar.gz#sha256=2afda6d73bbfab2f1a77ec14a3780e54c5f2b7aa0cb1cb25194a3ece16ddfbf5 (from https://pypi.org/simple/tobias/), version: 0.6.1
2021-07-29T05:14:31,742   Found link https://files.pythonhosted.org/packages/63/c9/ba2e4fae5adeb1e87b347ef978ab60de9597ce73762a27351816e0e16561/tobias-0.6.4.tar.gz#sha256=6107d978f80e76479f1750291ecc5af470045747208d9f8ce09b3247a8227414 (from https://pypi.org/simple/tobias/), version: 0.6.4
2021-07-29T05:14:31,742   Found link https://files.pythonhosted.org/packages/9b/3c/6fb653fe7dfe928631927e291f5d6e643477092a17375fb9bb819c484115/tobias-0.7.0.tar.gz#sha256=a21b0cb403523ea9522e06cff3dea5b5e0b8be7f83b77c1408d12bbe498d7b52 (from https://pypi.org/simple/tobias/), version: 0.7.0
2021-07-29T05:14:31,742   Found link https://files.pythonhosted.org/packages/c2/f6/ff9d6ad39ffc73a2462867415353a444d4768ef05d4c45a329816049c8e9/tobias-0.8.0.tar.gz#sha256=27f3d51bd7e5f75323450139a0132fc512bf5a4616afb23ce8f2d53345445aaa (from https://pypi.org/simple/tobias/), version: 0.8.0
2021-07-29T05:14:31,743   Found link https://files.pythonhosted.org/packages/51/f6/b58ce3670ff381d587ea93fbd6deea1fde85eed6f0d024231e20bd849f43/tobias-0.8.1.tar.gz#sha256=d2bf2adb341b8e1903a4c16f17fcbae7c346f2d1f52bdba2718d85fb7a21df0d (from https://pypi.org/simple/tobias/), version: 0.8.1
2021-07-29T05:14:31,743   Found link https://files.pythonhosted.org/packages/f1/5d/0715bdab689bd976342857c3088c945825ff737eb2b81bbd836311733318/tobias-0.9.0.tar.gz#sha256=addd4c981fdad316be594d3a5814c265fb0f95aa8b829098546738cc7774c0e9 (from https://pypi.org/simple/tobias/), version: 0.9.0
2021-07-29T05:14:31,743   Found link https://files.pythonhosted.org/packages/8f/a0/82725e4f0af658b9027d3403033f8dd45daa49467aa9f2e64e7e8bc48c32/tobias-0.10.1.tar.gz#sha256=03dbd2e31715bb402039222dbf71c3b83405a3fd095c0f8368942c1e39a07536 (from https://pypi.org/simple/tobias/), version: 0.10.1
2021-07-29T05:14:31,743   Found link https://files.pythonhosted.org/packages/53/06/5a8e5df3b319971f7843d0c6c94095338cb094e6f9bf8981a4392e0ef726/tobias-0.11.0.tar.gz#sha256=a7ff697e83d8318878f72310a7176f5fe8f95ef369bbc0066ee8943670ab599a (from https://pypi.org/simple/tobias/), version: 0.11.0
2021-07-29T05:14:31,744   Found link https://files.pythonhosted.org/packages/f5/e4/f08e32c2395813630cb03251849c97fbf31a2561e0759b1677267d2115c3/tobias-0.11.1.tar.gz#sha256=fe2482a69baf37bd1bf023ae487a5fae5eb5e59f2c531f5e661bb9e32c097f9d (from https://pypi.org/simple/tobias/), version: 0.11.1
2021-07-29T05:14:31,744   Found link https://files.pythonhosted.org/packages/f7/fa/4e4335b61c661e36ac62566b7ba211c2509f521a0b6ad66394f9cd043988/tobias-0.11.2.tar.gz#sha256=2f818ed0b4d691f8280154ea1556ca28e7f5f8b1f78cc9c1a6b6423c1598890b (from https://pypi.org/simple/tobias/), version: 0.11.2
2021-07-29T05:14:31,744   Found link https://files.pythonhosted.org/packages/5a/90/d39349bf8f45d0cf4c700df87fe60eb52a1b13f718bf11c10736bf3a5fe4/tobias-0.11.3.tar.gz#sha256=761913f2ef9e1ccfbd3c74add4795d642264a268a51df7c76303e0e9cfd885fa (from https://pypi.org/simple/tobias/), version: 0.11.3
2021-07-29T05:14:31,745   Found link https://files.pythonhosted.org/packages/6d/07/b704ab5db24234fb3ff02c1258ff3466d60a8c8489408c4e171f54fadd71/tobias-0.11.4.tar.gz#sha256=4c7364240274b1cb953d53ca92721b8a4d06bc8a323c76db1e1701545be85f72 (from https://pypi.org/simple/tobias/), version: 0.11.4
2021-07-29T05:14:31,745   Found link https://files.pythonhosted.org/packages/3d/6f/c37c8aee0eef5d304ebd6cdd719f34938bf05cf82850daff5f5cfe75c336/tobias-0.11.5.tar.gz#sha256=e67ab4a8a51becae3258ba01580399972af97b9d318ef582193e42c1ad3ce96a (from https://pypi.org/simple/tobias/), version: 0.11.5
2021-07-29T05:14:31,745   Found link https://files.pythonhosted.org/packages/d1/2b/ef18e98d77f997414cfc65f2d162415a138f905f1330f6bb072ab9f6ec1b/tobias-0.11.6.tar.gz#sha256=a72c6517268b464d558119c7b7e040b755674ab06f511f815dd455493d35b452 (from https://pypi.org/simple/tobias/), version: 0.11.6
2021-07-29T05:14:31,745   Found link https://files.pythonhosted.org/packages/69/85/6812ddd58daa5576312b4652036db61d07b021e022b804b7a42041c98417/tobias-0.11.7.tar.gz#sha256=463b37f5f4f601b8aa9ec4b0c9880bb20eb098dc28d07e29f5ae2d6bfc5857fa (from https://pypi.org/simple/tobias/), version: 0.11.7
2021-07-29T05:14:31,746   Found link https://files.pythonhosted.org/packages/ad/2c/139ff3d31d02f9b4aaaeb60e4f03bda18011256e4e6e2e5bcaa4db9e5b7b/tobias-0.12.0.tar.gz#sha256=caf7f242b833c28071c6c2470222dd73c2e1c8f2f635005a2722607bbe7ad8fa (from https://pypi.org/simple/tobias/), version: 0.12.0
2021-07-29T05:14:31,746   Found link https://files.pythonhosted.org/packages/26/40/ab1427b7baf2dc394a5f359ba86d9ecbb9453eee9a61bb2800e60f86a22d/tobias-0.12.1.tar.gz#sha256=bbcc598fba2831d0fce7d5a9728cd73c6911bf34dcb6c4bb0ee1ee926a59c43a (from https://pypi.org/simple/tobias/), version: 0.12.1
2021-07-29T05:14:31,746   Found link https://files.pythonhosted.org/packages/64/2d/2a7b82d2b079f99100b451e7e48c9dbe5cf8514d6541e2e93e7a4bb20950/tobias-0.12.2.tar.gz#sha256=c0a44610fc5853b20f93eb23e1a8cdd14af6cc1a931bda832999d8e5f95ff230 (from https://pypi.org/simple/tobias/), version: 0.12.2
2021-07-29T05:14:31,747   Found link https://files.pythonhosted.org/packages/ef/80/ad044198b1d41ab38c4858d73842415ebe756f31f305b39f519f0d6f8360/tobias-0.12.3.tar.gz#sha256=a776cb35783ea6b685a1055dbe8d48e5ea6d3f2da21036fc1a07fe81961e8efc (from https://pypi.org/simple/tobias/), version: 0.12.3
2021-07-29T05:14:31,747   Found link https://files.pythonhosted.org/packages/de/3c/00fbc5422f087eac2133a1ee05e40b51fbf8bf26a23c6637d7e128201da7/tobias-0.12.4.tar.gz#sha256=ec1bda4a286b58d89f34140823801513c46dcbb47c1727988c7f76c1dc758d3a (from https://pypi.org/simple/tobias/), version: 0.12.4
2021-07-29T05:14:31,747   Found link https://files.pythonhosted.org/packages/a0/7b/5ba92c33226324255bcd11b7c5bc86e8ac4195ecea454dd614c551abcd57/tobias-0.12.5.tar.gz#sha256=9fcd417bd61f488f8497ce7769e1b2aabe99bdb8d978cbffd99b83455943a32b (from https://pypi.org/simple/tobias/), version: 0.12.5
2021-07-29T05:14:31,747   Found link https://files.pythonhosted.org/packages/08/85/b4013d500f1f03e27d30f4e0a09a363c611d9cc1b9683a770e91bead6f5c/tobias-0.12.6.tar.gz#sha256=cbd6a776f25109a276308d16f71de4bfeb777163c80327dae60d154c8ade8b4b (from https://pypi.org/simple/tobias/), version: 0.12.6
2021-07-29T05:14:31,748   Found link https://files.pythonhosted.org/packages/60/69/21501242665edbda95dfb02c646bf59873546a7a45bbb226b18381cd4fc5/tobias-0.12.7.tar.gz#sha256=c365cd9a7d63937be3eab436cc58843d49d254d741aa3bb71d78a1781dbe816d (from https://pypi.org/simple/tobias/), version: 0.12.7
2021-07-29T05:14:31,748   Found link https://files.pythonhosted.org/packages/c1/03/749d515f967b25c095951daee476942352a9131ebccc10d63afaf9b0a6b4/tobias-0.12.8.tar.gz#sha256=66f145d3cb3c307f195ede1115736da0852e4bf12461869453b9dc43342b4d29 (from https://pypi.org/simple/tobias/), version: 0.12.8
2021-07-29T05:14:31,748   Found link https://files.pythonhosted.org/packages/3b/c9/623896e4c372c0a1f7359f087a00937e3ed2361d61809b5284e84a83659f/tobias-0.12.9.tar.gz#sha256=0b307d94719e0f28e846ddebaf4533383c5129824bca6bcba49b2a531e00b279 (from https://pypi.org/simple/tobias/), version: 0.12.9
2021-07-29T05:14:31,748   Found link https://files.pythonhosted.org/packages/3b/29/c1d3661e5f7ca201a0514358ee9a7ad70da476268b73cc809cbd3d64acc8/tobias-0.12.10.tar.gz#sha256=a930a3e5bf24fac18d0bfcec2cc42daba603b0d2301762607eace6d8645e2981 (from https://pypi.org/simple/tobias/), version: 0.12.10
2021-07-29T05:14:31,749   Found link https://files.pythonhosted.org/packages/b5/f5/98229676d91f04e2dd62e7aef674031a3e4d2f0d099a9dcb55b0a02d7108/tobias-0.12.11.tar.gz#sha256=de4e34ceeb5c6a8cd9272501b698e1a1e70b7d7acaba55d4a895755216c9c349 (from https://pypi.org/simple/tobias/), version: 0.12.11
2021-07-29T05:14:31,749 Skipping link: not a file: https://pypi.org/simple/tobias/
2021-07-29T05:14:31,771 Given no hashes to check 1 links for project 'tobias': discarding no candidates
2021-07-29T05:14:31,789 Collecting tobias==0.8.1
2021-07-29T05:14:31,791   Created temporary directory: /tmp/pip-unpack-7fwn351_
2021-07-29T05:14:32,057   Downloading tobias-0.8.1.tar.gz (297 kB)
2021-07-29T05:14:32,520   Added tobias==0.8.1 from https://files.pythonhosted.org/packages/51/f6/b58ce3670ff381d587ea93fbd6deea1fde85eed6f0d024231e20bd849f43/tobias-0.8.1.tar.gz#sha256=d2bf2adb341b8e1903a4c16f17fcbae7c346f2d1f52bdba2718d85fb7a21df0d to build tracker '/tmp/pip-req-tracker-r58s503i'
2021-07-29T05:14:32,521     Running setup.py (path:/tmp/pip-wheel-6duej0xk/tobias_f561f10f174e4fa7bddd671afaf9bd4c/setup.py) egg_info for package tobias
2021-07-29T05:14:32,522     Created temporary directory: /tmp/pip-pip-egg-info-rb_qdp2w
2021-07-29T05:14:32,523     Running command python setup.py egg_info
2021-07-29T05:14:33,824     running egg_info
2021-07-29T05:14:33,826     creating /tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info
2021-07-29T05:14:33,827     writing /tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/PKG-INFO
2021-07-29T05:14:33,830     writing dependency_links to /tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/dependency_links.txt
2021-07-29T05:14:33,831     writing entry points to /tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/entry_points.txt
2021-07-29T05:14:33,832     writing requirements to /tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/requires.txt
2021-07-29T05:14:33,833     writing top-level names to /tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/top_level.txt
2021-07-29T05:14:33,835     writing manifest file '/tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/SOURCES.txt'
2021-07-29T05:14:33,985     reading manifest file '/tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/SOURCES.txt'
2021-07-29T05:14:33,986     reading manifest template 'MANIFEST.in'
2021-07-29T05:14:34,003     adding license file 'LICENSE'
2021-07-29T05:14:34,006     writing manifest file '/tmp/pip-pip-egg-info-rb_qdp2w/tobias.egg-info/SOURCES.txt'
2021-07-29T05:14:34,102   Source in /tmp/pip-wheel-6duej0xk/tobias_f561f10f174e4fa7bddd671afaf9bd4c has version 0.8.1, which satisfies requirement tobias==0.8.1 from https://files.pythonhosted.org/packages/51/f6/b58ce3670ff381d587ea93fbd6deea1fde85eed6f0d024231e20bd849f43/tobias-0.8.1.tar.gz#sha256=d2bf2adb341b8e1903a4c16f17fcbae7c346f2d1f52bdba2718d85fb7a21df0d
2021-07-29T05:14:34,103   Removed tobias==0.8.1 from https://files.pythonhosted.org/packages/51/f6/b58ce3670ff381d587ea93fbd6deea1fde85eed6f0d024231e20bd849f43/tobias-0.8.1.tar.gz#sha256=d2bf2adb341b8e1903a4c16f17fcbae7c346f2d1f52bdba2718d85fb7a21df0d from build tracker '/tmp/pip-req-tracker-r58s503i'
2021-07-29T05:14:34,107 Created temporary directory: /tmp/pip-unpack-9__qbb46
2021-07-29T05:14:34,108 Building wheels for collected packages: tobias
2021-07-29T05:14:34,112   Created temporary directory: /tmp/pip-wheel-_7fvl4sf
2021-07-29T05:14:34,112   Building wheel for tobias (setup.py): started
2021-07-29T05:14:34,112   Destination directory: /tmp/pip-wheel-_7fvl4sf
2021-07-29T05:14:34,113   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-6duej0xk/tobias_f561f10f174e4fa7bddd671afaf9bd4c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-6duej0xk/tobias_f561f10f174e4fa7bddd671afaf9bd4c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_7fvl4sf
2021-07-29T05:14:35,842   running bdist_wheel
2021-07-29T05:14:35,846   running build
2021-07-29T05:14:35,846   running build_py
2021-07-29T05:14:35,981   creating build
2021-07-29T05:14:35,981   creating build/lib.linux-armv7l-3.9
2021-07-29T05:14:35,981   creating build/lib.linux-armv7l-3.9/tobias
2021-07-29T05:14:35,982   copying tobias/TOBIAS.py -> build/lib.linux-armv7l-3.9/tobias
2021-07-29T05:14:35,985   copying tobias/__init__.py -> build/lib.linux-armv7l-3.9/tobias
2021-07-29T05:14:35,987   creating build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,987   copying tobias/misc/create_network.py -> build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,990   copying tobias/misc/log2table.py -> build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,991   copying tobias/misc/__init__.py -> build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,993   copying tobias/misc/subsample_bam.py -> build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,995   copying tobias/misc/merge_pdfs.py -> build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,996   copying tobias/misc/maxpos.py -> build/lib.linux-armv7l-3.9/tobias/misc
2021-07-29T05:14:35,999   creating build/lib.linux-armv7l-3.9/tobias/motifs
2021-07-29T05:14:36,000   copying tobias/motifs/tfbscan.py -> build/lib.linux-armv7l-3.9/tobias/motifs
2021-07-29T05:14:36,003   copying tobias/motifs/format_motifs.py -> build/lib.linux-armv7l-3.9/tobias/motifs
2021-07-29T05:14:36,005   copying tobias/motifs/__init__.py -> build/lib.linux-armv7l-3.9/tobias/motifs
2021-07-29T05:14:36,006   copying tobias/motifs/score_bed.py -> build/lib.linux-armv7l-3.9/tobias/motifs
2021-07-29T05:14:36,009   copying tobias/motifs/cluster_tfbs.py -> build/lib.linux-armv7l-3.9/tobias/motifs
2021-07-29T05:14:36,012   creating build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,012   copying tobias/utils/filter_important_factors.py -> build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,015   copying tobias/utils/__init__.py -> build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,016   copying tobias/utils/regions.py -> build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,019   copying tobias/utils/motifs.py -> build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,022   copying tobias/utils/logger.py -> build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,024   copying tobias/utils/utilities.py -> build/lib.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,028   creating build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,029   copying tobias/footprinting/atacorrect.py -> build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,032   copying tobias/footprinting/__init__.py -> build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,033   copying tobias/footprinting/scorebigwig.py -> build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,036   copying tobias/footprinting/bindetect_functions.py -> build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,039   copying tobias/footprinting/bindetect.py -> build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,042   copying tobias/footprinting/atacorrect_functions.py -> build/lib.linux-armv7l-3.9/tobias/footprinting
2021-07-29T05:14:36,045   creating build/lib.linux-armv7l-3.9/tobias/plotting
2021-07-29T05:14:36,046   copying tobias/plotting/plot_aggregate.py -> build/lib.linux-armv7l-3.9/tobias/plotting
2021-07-29T05:14:36,049   copying tobias/plotting/__init__.py -> build/lib.linux-armv7l-3.9/tobias/plotting
2021-07-29T05:14:36,051   copying tobias/plotting/plot_changes.py -> build/lib.linux-armv7l-3.9/tobias/plotting
2021-07-29T05:14:36,053   copying tobias/plotting/plot_heatmap.py -> build/lib.linux-armv7l-3.9/tobias/plotting
2021-07-29T05:14:36,060   running build_ext
2021-07-29T05:14:36,130   skipping 'tobias/utils/ngs.c' Cython extension (up-to-date)
2021-07-29T05:14:36,130   skipping 'tobias/utils/sequences.c' Cython extension (up-to-date)
2021-07-29T05:14:36,130   skipping 'tobias/utils/signals.c' Cython extension (up-to-date)
2021-07-29T05:14:36,131   building 'tobias.utils.ngs' extension
2021-07-29T05:14:36,131   creating build/temp.linux-armv7l-3.9
2021-07-29T05:14:36,132   creating build/temp.linux-armv7l-3.9/tobias
2021-07-29T05:14:36,132   creating build/temp.linux-armv7l-3.9/tobias/utils
2021-07-29T05:14:36,133   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c tobias/utils/ngs.c -o build/temp.linux-armv7l-3.9/tobias/utils/ngs.o
2021-07-29T05:14:36,538   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T05:14:36,538                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T05:14:36,539                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T05:14:36,539                    from tobias/utils/ngs.c:610:
2021-07-29T05:14:36,539   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T05:14:36,539      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T05:14:36,539         |  ^~~~~~~
2021-07-29T05:14:44,153   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/tobias/utils/ngs.o -o build/lib.linux-armv7l-3.9/tobias/utils/ngs.cpython-39-arm-linux-gnueabihf.so
2021-07-29T05:14:44,298   building 'tobias.utils.sequences' extension
2021-07-29T05:14:44,298   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c tobias/utils/sequences.c -o build/temp.linux-armv7l-3.9/tobias/utils/sequences.o
2021-07-29T05:14:44,670   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T05:14:44,670                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T05:14:44,670                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T05:14:44,670                    from tobias/utils/sequences.c:610:
2021-07-29T05:14:44,670   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T05:14:44,670      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T05:14:44,671         |  ^~~~~~~
2021-07-29T05:14:58,637   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/tobias/utils/sequences.o -o build/lib.linux-armv7l-3.9/tobias/utils/sequences.cpython-39-arm-linux-gnueabihf.so
2021-07-29T05:14:58,800   building 'tobias.utils.signals' extension
2021-07-29T05:14:58,800   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c tobias/utils/signals.c -o build/temp.linux-armv7l-3.9/tobias/utils/signals.o
2021-07-29T05:14:59,169   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T05:14:59,169                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T05:14:59,169                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T05:14:59,169                    from tobias/utils/signals.c:610:
2021-07-29T05:14:59,169   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T05:14:59,170      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T05:14:59,170         |  ^~~~~~~
2021-07-29T05:15:04,694   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/tobias/utils/signals.o -o build/lib.linux-armv7l-3.9/tobias/utils/signals.cpython-39-arm-linux-gnueabihf.so
2021-07-29T05:15:04,826   running build_scripts
2021-07-29T05:15:04,827   creating build/scripts-3.9
2021-07-29T05:15:04,828   copying and adjusting tobias/utils/filter_important_factors.py -> build/scripts-3.9
2021-07-29T05:15:04,830   changing mode of build/scripts-3.9/filter_important_factors.py from 644 to 755
2021-07-29T05:15:04,838   installing to build/bdist.linux-armv7l/wheel
2021-07-29T05:15:04,838   running install
2021-07-29T05:15:04,839   running install_lib
2021-07-29T05:15:04,843   creating build/bdist.linux-armv7l
2021-07-29T05:15:04,844   creating build/bdist.linux-armv7l/wheel
2021-07-29T05:15:04,845   creating build/bdist.linux-armv7l/wheel/tobias
2021-07-29T05:15:04,847   creating build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,848   copying build/lib.linux-armv7l-3.9/tobias/misc/create_network.py -> build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,851   copying build/lib.linux-armv7l-3.9/tobias/misc/log2table.py -> build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,852   copying build/lib.linux-armv7l-3.9/tobias/misc/__init__.py -> build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,854   copying build/lib.linux-armv7l-3.9/tobias/misc/subsample_bam.py -> build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,856   copying build/lib.linux-armv7l-3.9/tobias/misc/merge_pdfs.py -> build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,858   copying build/lib.linux-armv7l-3.9/tobias/misc/maxpos.py -> build/bdist.linux-armv7l/wheel/tobias/misc
2021-07-29T05:15:04,860   copying build/lib.linux-armv7l-3.9/tobias/TOBIAS.py -> build/bdist.linux-armv7l/wheel/tobias
2021-07-29T05:15:04,863   creating build/bdist.linux-armv7l/wheel/tobias/motifs
2021-07-29T05:15:04,864   copying build/lib.linux-armv7l-3.9/tobias/motifs/tfbscan.py -> build/bdist.linux-armv7l/wheel/tobias/motifs
2021-07-29T05:15:04,867   copying build/lib.linux-armv7l-3.9/tobias/motifs/format_motifs.py -> build/bdist.linux-armv7l/wheel/tobias/motifs
2021-07-29T05:15:04,869   copying build/lib.linux-armv7l-3.9/tobias/motifs/__init__.py -> build/bdist.linux-armv7l/wheel/tobias/motifs
2021-07-29T05:15:04,871   copying build/lib.linux-armv7l-3.9/tobias/motifs/score_bed.py -> build/bdist.linux-armv7l/wheel/tobias/motifs
2021-07-29T05:15:04,873   copying build/lib.linux-armv7l-3.9/tobias/motifs/cluster_tfbs.py -> build/bdist.linux-armv7l/wheel/tobias/motifs
2021-07-29T05:15:04,875   copying build/lib.linux-armv7l-3.9/tobias/__init__.py -> build/bdist.linux-armv7l/wheel/tobias
2021-07-29T05:15:04,878   creating build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,879   copying build/lib.linux-armv7l-3.9/tobias/utils/ngs.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,893   copying build/lib.linux-armv7l-3.9/tobias/utils/filter_important_factors.py -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,895   copying build/lib.linux-armv7l-3.9/tobias/utils/sequences.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,916   copying build/lib.linux-armv7l-3.9/tobias/utils/__init__.py -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,918   copying build/lib.linux-armv7l-3.9/tobias/utils/regions.py -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,921   copying build/lib.linux-armv7l-3.9/tobias/utils/motifs.py -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,924   copying build/lib.linux-armv7l-3.9/tobias/utils/logger.py -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,926   copying build/lib.linux-armv7l-3.9/tobias/utils/signals.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,935   copying build/lib.linux-armv7l-3.9/tobias/utils/utilities.py -> build/bdist.linux-armv7l/wheel/tobias/utils
2021-07-29T05:15:04,938   creating build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,939   copying build/lib.linux-armv7l-3.9/tobias/footprinting/atacorrect.py -> build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,942   copying build/lib.linux-armv7l-3.9/tobias/footprinting/__init__.py -> build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,943   copying build/lib.linux-armv7l-3.9/tobias/footprinting/scorebigwig.py -> build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,946   copying build/lib.linux-armv7l-3.9/tobias/footprinting/bindetect_functions.py -> build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,949   copying build/lib.linux-armv7l-3.9/tobias/footprinting/bindetect.py -> build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,953   copying build/lib.linux-armv7l-3.9/tobias/footprinting/atacorrect_functions.py -> build/bdist.linux-armv7l/wheel/tobias/footprinting
2021-07-29T05:15:04,956   creating build/bdist.linux-armv7l/wheel/tobias/plotting
2021-07-29T05:15:04,957   copying build/lib.linux-armv7l-3.9/tobias/plotting/plot_aggregate.py -> build/bdist.linux-armv7l/wheel/tobias/plotting
2021-07-29T05:15:04,960   copying build/lib.linux-armv7l-3.9/tobias/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/tobias/plotting
2021-07-29T05:15:04,962   copying build/lib.linux-armv7l-3.9/tobias/plotting/plot_changes.py -> build/bdist.linux-armv7l/wheel/tobias/plotting
2021-07-29T05:15:04,964   copying build/lib.linux-armv7l-3.9/tobias/plotting/plot_heatmap.py -> build/bdist.linux-armv7l/wheel/tobias/plotting
2021-07-29T05:15:04,967   running install_egg_info
2021-07-29T05:15:04,994   running egg_info
2021-07-29T05:15:04,994   writing tobias.egg-info/PKG-INFO
2021-07-29T05:15:05,023   writing dependency_links to tobias.egg-info/dependency_links.txt
2021-07-29T05:15:05,024   writing entry points to tobias.egg-info/entry_points.txt
2021-07-29T05:15:05,025   writing requirements to tobias.egg-info/requires.txt
2021-07-29T05:15:05,026   writing top-level names to tobias.egg-info/top_level.txt
2021-07-29T05:15:05,038   reading manifest file 'tobias.egg-info/SOURCES.txt'
2021-07-29T05:15:05,041   reading manifest template 'MANIFEST.in'
2021-07-29T05:15:05,058   adding license file 'LICENSE'
2021-07-29T05:15:05,062   writing manifest file 'tobias.egg-info/SOURCES.txt'
2021-07-29T05:15:05,064   Copying tobias.egg-info to build/bdist.linux-armv7l/wheel/tobias-0.8.1-py3.9.egg-info
2021-07-29T05:15:05,080   running install_scripts
2021-07-29T05:15:05,144   creating build/bdist.linux-armv7l/wheel/tobias-0.8.1.data
2021-07-29T05:15:05,145   creating build/bdist.linux-armv7l/wheel/tobias-0.8.1.data/scripts
2021-07-29T05:15:05,146   copying build/scripts-3.9/filter_important_factors.py -> build/bdist.linux-armv7l/wheel/tobias-0.8.1.data/scripts
2021-07-29T05:15:05,147   changing mode of build/bdist.linux-armv7l/wheel/tobias-0.8.1.data/scripts/filter_important_factors.py to 755
2021-07-29T05:15:05,179   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-29T05:15:05,184   creating build/bdist.linux-armv7l/wheel/tobias-0.8.1.dist-info/WHEEL
2021-07-29T05:15:05,187   creating '/tmp/pip-wheel-_7fvl4sf/tobias-0.8.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-29T05:15:05,190   adding 'tobias/TOBIAS.py'
2021-07-29T05:15:05,191   adding 'tobias/__init__.py'
2021-07-29T05:15:05,193   adding 'tobias/footprinting/__init__.py'
2021-07-29T05:15:05,197   adding 'tobias/footprinting/atacorrect.py'
2021-07-29T05:15:05,200   adding 'tobias/footprinting/atacorrect_functions.py'
2021-07-29T05:15:05,205   adding 'tobias/footprinting/bindetect.py'
2021-07-29T05:15:05,209   adding 'tobias/footprinting/bindetect_functions.py'
2021-07-29T05:15:05,211   adding 'tobias/footprinting/scorebigwig.py'
2021-07-29T05:15:05,213   adding 'tobias/misc/__init__.py'
2021-07-29T05:15:05,215   adding 'tobias/misc/create_network.py'
2021-07-29T05:15:05,216   adding 'tobias/misc/log2table.py'
2021-07-29T05:15:05,218   adding 'tobias/misc/maxpos.py'
2021-07-29T05:15:05,219   adding 'tobias/misc/merge_pdfs.py'
2021-07-29T05:15:05,221   adding 'tobias/misc/subsample_bam.py'
2021-07-29T05:15:05,223   adding 'tobias/motifs/__init__.py'
2021-07-29T05:15:05,224   adding 'tobias/motifs/cluster_tfbs.py'
2021-07-29T05:15:05,228   adding 'tobias/motifs/format_motifs.py'
2021-07-29T05:15:05,229   adding 'tobias/motifs/score_bed.py'
2021-07-29T05:15:05,232   adding 'tobias/motifs/tfbscan.py'
2021-07-29T05:15:05,233   adding 'tobias/plotting/__init__.py'
2021-07-29T05:15:05,236   adding 'tobias/plotting/plot_aggregate.py'
2021-07-29T05:15:05,238   adding 'tobias/plotting/plot_changes.py'
2021-07-29T05:15:05,241   adding 'tobias/plotting/plot_heatmap.py'
2021-07-29T05:15:05,242   adding 'tobias/utils/__init__.py'
2021-07-29T05:15:05,244   adding 'tobias/utils/filter_important_factors.py'
2021-07-29T05:15:05,245   adding 'tobias/utils/logger.py'
2021-07-29T05:15:05,248   adding 'tobias/utils/motifs.py'
2021-07-29T05:15:05,363   adding 'tobias/utils/ngs.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T05:15:05,370   adding 'tobias/utils/regions.py'
2021-07-29T05:15:05,541   adding 'tobias/utils/sequences.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T05:15:05,621   adding 'tobias/utils/signals.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T05:15:05,626   adding 'tobias/utils/utilities.py'
2021-07-29T05:15:05,629   adding 'tobias-0.8.1.data/scripts/filter_important_factors.py'
2021-07-29T05:15:05,631   adding 'tobias-0.8.1.dist-info/LICENSE'
2021-07-29T05:15:05,632   adding 'tobias-0.8.1.dist-info/METADATA'
2021-07-29T05:15:05,633   adding 'tobias-0.8.1.dist-info/WHEEL'
2021-07-29T05:15:05,634   adding 'tobias-0.8.1.dist-info/entry_points.txt'
2021-07-29T05:15:05,635   adding 'tobias-0.8.1.dist-info/top_level.txt'
2021-07-29T05:15:05,636   adding 'tobias-0.8.1.dist-info/zip-safe'
2021-07-29T05:15:05,637   adding 'tobias-0.8.1.dist-info/RECORD'
2021-07-29T05:15:05,648   removing build/bdist.linux-armv7l/wheel
2021-07-29T05:15:05,786   Building wheel for tobias (setup.py): finished with status 'done'
2021-07-29T05:15:05,798   Created wheel for tobias: filename=tobias-0.8.1-cp39-cp39-linux_armv7l.whl size=738140 sha256=7273010d1d989b772da014c5efc63d8a017601ba98f1cd0449f6721c007d488b
2021-07-29T05:15:05,798   Stored in directory: /tmp/pip-ephem-wheel-cache-ztqfvnki/wheels/55/32/0b/80f0c2fc3af1af53f200fff7a7b36c0f54cc6a45433fc1e184
2021-07-29T05:15:05,810 Successfully built tobias
2021-07-29T05:15:05,840 Removed build tracker: '/tmp/pip-req-tracker-r58s503i'