2021-07-29T08:24:10,533 Created temporary directory: /tmp/pip-ephem-wheel-cache-nfthm8ow 2021-07-29T08:24:10,536 Created temporary directory: /tmp/pip-req-tracker-5b7hej0y 2021-07-29T08:24:10,537 Initialized build tracking at /tmp/pip-req-tracker-5b7hej0y 2021-07-29T08:24:10,537 Created build tracker: /tmp/pip-req-tracker-5b7hej0y 2021-07-29T08:24:10,537 Entered build tracker: /tmp/pip-req-tracker-5b7hej0y 2021-07-29T08:24:10,538 Created temporary directory: /tmp/pip-wheel-oh24djnt 2021-07-29T08:24:10,570 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-29T08:24:10,571 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-29T08:24:10,571 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-29T08:24:10,571 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-29T08:24:10,571 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-29T08:24:10,574 WARNING: Location '/pybedtools/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T08:24:10,574 WARNING: Location 't/pybedtools/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T08:24:10,575 WARNING: Location 'm/pybedtools/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T08:24:10,575 WARNING: Location 'p/pybedtools/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T08:24:10,575 1 location(s) to search for versions of pybedtools: 2021-07-29T08:24:10,575 * https://pypi.org/simple/pybedtools/ 2021-07-29T08:24:10,576 Fetching project page and analyzing links: https://pypi.org/simple/pybedtools/ 2021-07-29T08:24:10,576 Getting page https://pypi.org/simple/pybedtools/ 2021-07-29T08:24:10,578 Found index url https://pypi.org/simple 2021-07-29T08:24:10,774 Found link https://files.pythonhosted.org/packages/00/d9/aca9636b3e5b29f232fd6f60859f07f3420ec3c0712b50cb25c734a02a1f/pybedtools-0.2.2dev.tar.gz#sha256=6ab084ce36f26c6086680ef25693873f9534ddb3aefec3aedbc8221e5f6f4fb6 (from https://pypi.org/simple/pybedtools/), version: 0.2.2dev 2021-07-29T08:24:10,774 Found link https://files.pythonhosted.org/packages/44/19/a9bebb9eccd8d64d58202d5b3a151de81ffc7703a47503161b7615554703/pybedtools-0.5dev.tar.gz#sha256=4e55a927a22979473c1414b43154cd3e5a51380b1895bc555a85ee4bf385ba25 (from https://pypi.org/simple/pybedtools/), version: 0.5dev 2021-07-29T08:24:10,774 Found link https://files.pythonhosted.org/packages/e4/2f/e842c6b1165d706ebc62c931c11d4dfffe60e6b045ecf80eef7ea78d7afc/pybedtools-0.5rc1.tar.gz#sha256=78ccf10923b00ec14cf337b3b9624e39fdd383ba29048f3cc03e3aabc52edb40 (from https://pypi.org/simple/pybedtools/), version: 0.5rc1 2021-07-29T08:24:10,775 Found link https://files.pythonhosted.org/packages/85/17/c89028c00537638629ca21be7f1b84e963fc8b63c1e9a5fda9884f86fb90/pybedtools-0.5.tar.gz#sha256=16e46c664e47cd36d926de202d9ac99cf7e8c970e6e008603ccb6a23139a257a (from https://pypi.org/simple/pybedtools/), version: 0.5 2021-07-29T08:24:10,775 Found link https://files.pythonhosted.org/packages/e7/9b/f082d2db470a0c9ba777a0d661fd5a7292c367840880040940de4a705e1f/pybedtools-0.5.5.tar.gz#sha256=4bc9cdadb12fae47c1a2e423f467cfd92dc282a52f2ac5d21c35611ef59c698d (from https://pypi.org/simple/pybedtools/), version: 0.5.5 2021-07-29T08:24:10,775 Found link https://files.pythonhosted.org/packages/3c/e7/365015ec8104195329635cb75ef745bff45d905271cd165f5048efaf48e3/pybedtools-0.6rc1.tar.gz#sha256=006e637d2a2e6f98f7b178211adc69fabf3cf37e168c730dbfe9e2fa810f8f8d (from https://pypi.org/simple/pybedtools/), version: 0.6rc1 2021-07-29T08:24:10,776 Found link https://files.pythonhosted.org/packages/04/ce/0e1480725fe80eb9a401f59e1bcc28fce721f6c2c5d7be233894d0154551/pybedtools-0.6.tar.gz#sha256=416406bbf059372e3214c68688447cbb9cd4e45b6a58b1615be4ff932975ede6 (from https://pypi.org/simple/pybedtools/), version: 0.6 2021-07-29T08:24:10,776 Found link https://files.pythonhosted.org/packages/ac/25/c971ba83c6df08cbd17626339ec637df57a0aa409ba3042408ff349dd710/pybedtools-0.6.1.tar.gz#sha256=da3f1ec9e6d23cba6627adb124a27d291f72b855006a277d91c1b366bfccdb22 (from https://pypi.org/simple/pybedtools/), version: 0.6.1 2021-07-29T08:24:10,776 Found link https://files.pythonhosted.org/packages/3e/71/cb09c7b874a87803f9fb9a9b679d02a82879b9cadca4c93756e05e65a439/pybedtools-0.6.2.tar.gz#sha256=7263d2a32a4805e0b0c25be32f38a17de760557c2d83234e46364ecd2debec14 (from https://pypi.org/simple/pybedtools/), version: 0.6.2 2021-07-29T08:24:10,777 Found link https://files.pythonhosted.org/packages/28/0b/15291a1aac0a2a1eb814a0c883ccebf2eebaebbef9923bfa0444df0cb3a8/pybedtools-0.6.3.tar.gz#sha256=bd7ad8584d6d19eef175a0f9b9ff00db903db532ae4c3e8bad614246974daff0 (from https://pypi.org/simple/pybedtools/), version: 0.6.3 2021-07-29T08:24:10,777 Found link https://files.pythonhosted.org/packages/7a/12/73027be04fc57dd3340e2120f0148c0aca569b16e62333f32a40b2b06ee0/pybedtools-0.6.4.tar.gz#sha256=98cd0e8bc278e8d3bf584cde5eea43f23251c91bbd70407172db206d2f3f751f (from https://pypi.org/simple/pybedtools/), version: 0.6.4 2021-07-29T08:24:10,777 Found link https://files.pythonhosted.org/packages/a4/98/dab963ff44ddd40849a01b145b6d769158d9794b979fdbfd173728e06e5b/pybedtools-0.6.5.tar.gz#sha256=0ee69c4670bae332f6de600af5edb4ed45e8dcaf3988e7eb78ab53a1889a8d9c (from https://pypi.org/simple/pybedtools/), version: 0.6.5 2021-07-29T08:24:10,777 Found link https://files.pythonhosted.org/packages/a3/91/02e900caea18ee909665440727222a9f37c9a532170c52684123f07d6e21/pybedtools-0.6.6.tar.gz#sha256=b7d2436c2f29b92cf7c2a4552a6a13adc73b2026d7a25c4aaae6797589698c68 (from https://pypi.org/simple/pybedtools/), version: 0.6.6 2021-07-29T08:24:10,778 Found link https://files.pythonhosted.org/packages/af/ff/7d488b19b8e4109bbaf7b7e4c5dc53207f2c4354d7729cf73f17a79fa104/pybedtools-0.6.7.tar.gz#sha256=b31853473db3a755bbe668b5fc209f0cd9ed876f15e192c244e348f4a7cb1cfb (from https://pypi.org/simple/pybedtools/), version: 0.6.7 2021-07-29T08:24:10,778 Found link https://files.pythonhosted.org/packages/aa/e9/c92a7e58326bf76534af1fbd4074def6999130b1838b4dcc51e9f3ba5e17/pybedtools-0.6.8.tar.gz#sha256=a278a1b5ae230eb9c1b57c4da45dad5646aead899e927ad4d9f38df3f90841db (from https://pypi.org/simple/pybedtools/), version: 0.6.8 2021-07-29T08:24:10,778 Found link https://files.pythonhosted.org/packages/79/20/2a0861cc9ffc41043efd814cdf860828f4b2213573c82ea6138eb6cb221b/pybedtools-0.6.9.tar.gz#sha256=56915b3e2200c6fb56260a36f839e66ce27d7dd3ef55fba278c3931b786fbfd1 (from https://pypi.org/simple/pybedtools/), version: 0.6.9 2021-07-29T08:24:10,779 Found link https://files.pythonhosted.org/packages/e6/8d/06beb4e8a9e9a4ce042af337a5b855a789da586072d0c418ed9cb9398628/pybedtools-0.7.0.tar.gz#sha256=a0b3bd7c32786067a767585ab17ab9e04bf7e227f275ff3883fab9c1d8e458ba (from https://pypi.org/simple/pybedtools/), version: 0.7.0 2021-07-29T08:24:10,779 Found link https://files.pythonhosted.org/packages/b5/1c/1b7e66668105e5b84cc6224a54ce552c6a6113e9b34c980fc436140e6be1/pybedtools-0.7.1.tar.gz#sha256=d889e8e1f75803b13f0f774320ca3e38eea88e7998866a1c90e9ba51caa855be (from https://pypi.org/simple/pybedtools/), version: 0.7.1 2021-07-29T08:24:10,779 Found link https://files.pythonhosted.org/packages/a2/43/d80dbf32da421c78ea84a386402e1840dd06f3aba7e5fe73e8134e1ce50a/pybedtools-0.7.4.tar.gz#sha256=15cfae9e8a207ded403ad9fa2e77f09d14c2fe377d1bc5f8b063647e2d0554e0 (from https://pypi.org/simple/pybedtools/), version: 0.7.4 2021-07-29T08:24:10,779 Found link https://files.pythonhosted.org/packages/ed/f1/2caa4dc57b62707f0df147c0820d1fc8565e439c5f5c86778df7a2fec59f/pybedtools-0.7.5.tar.gz#sha256=f2428b4845083eff36385bec241ddddf7488a7de3f18886a78c73226e9e3306c (from https://pypi.org/simple/pybedtools/), version: 0.7.5 2021-07-29T08:24:10,780 Found link https://files.pythonhosted.org/packages/f4/49/ce7ccc0ad79189eb8b8eec170c350643e7a209f98e34dae239a954d6fdb0/pybedtools-0.7.6.tar.gz#sha256=8b6382036c715b49f83e35cc787d7084c1633ebe94a2a3c4102e805613f7426b (from https://pypi.org/simple/pybedtools/), version: 0.7.6 2021-07-29T08:24:10,780 Found link https://files.pythonhosted.org/packages/c2/a6/29fd41e86b38e7ca39eb7818c422e927534f2bd324c34cfd411cfca203b0/pybedtools-0.7.7.tar.gz#sha256=dba8758bd86121e4dcfc8b25ebae7d3b2de6ff9e38e4cdd9dc03f128bf5d4c9d (from https://pypi.org/simple/pybedtools/), version: 0.7.7 2021-07-29T08:24:10,780 Found link https://files.pythonhosted.org/packages/2d/ee/aa19e50e03e06c817d00eadf8b56824b9e473da8c3e8ca3b33a11717ee6f/pybedtools-0.7.8.tar.gz#sha256=e80e8b73b233ec6950069e0e1cf14127aff8310a8eaf3ee663bdfbcb61309fdc (from https://pypi.org/simple/pybedtools/), version: 0.7.8 2021-07-29T08:24:10,781 Found link https://files.pythonhosted.org/packages/7c/66/8aecffd830eddbd05c1c3e737f87220cef9f2a8358f1d692f85b30269520/pybedtools-0.7.9.tar.gz#sha256=e9134d7dc3de41b90126df633fe3aa854a0427d7ada834dc8681081e8b2fea14 (from https://pypi.org/simple/pybedtools/), version: 0.7.9 2021-07-29T08:24:10,781 Found link https://files.pythonhosted.org/packages/09/57/e7668e8644c60413be05b8cc9c23aaea3a0717b4025843d8c26b7c4822af/pybedtools-0.7.10.tar.gz#sha256=518a2311bd33f29cf2ee8fc1a028dda8c8e380c9fc83fcb0fbaa206933174b50 (from https://pypi.org/simple/pybedtools/), version: 0.7.10 2021-07-29T08:24:10,781 Found link https://files.pythonhosted.org/packages/ca/b6/af143d5247cfe331e32c96ca92056293140eb8ce788d37842f6dcea734b4/pybedtools-0.8.0.tar.gz#sha256=4eebd2cd1764ee1c604fd881703c3e329195485350b987b7fb8db42d232984f6 (from https://pypi.org/simple/pybedtools/), version: 0.8.0 2021-07-29T08:24:10,781 Found link https://files.pythonhosted.org/packages/bf/14/152220f39cda6b9b72810eeed103c6ec78422429adabe3aafc3eaf6feb40/pybedtools-0.8.1.tar.gz#sha256=c035e078617f94720eb627e20c91f2377a7bd9158a137872a6ac88f800898593 (from https://pypi.org/simple/pybedtools/), version: 0.8.1 2021-07-29T08:24:10,782 Found link https://files.pythonhosted.org/packages/5b/57/46e9c8135954550d1d3a05db5b0462a264239f7f71c78af304bb47c5c900/pybedtools-0.8.2.tar.gz#sha256=a184a36099458627e7ef52ea88218f7c00dc9c505b4256ece9ede58b1efa8771 (from https://pypi.org/simple/pybedtools/), version: 0.8.2 2021-07-29T08:24:10,782 Skipping link: not a file: https://pypi.org/simple/pybedtools/ 2021-07-29T08:24:10,803 Given no hashes to check 1 links for project 'pybedtools': discarding no candidates 2021-07-29T08:24:10,821 Collecting pybedtools==0.8.2 2021-07-29T08:24:10,823 Created temporary directory: /tmp/pip-unpack-0wa45xg7 2021-07-29T08:24:12,995 Downloading pybedtools-0.8.2.tar.gz (12.5 MB) 2021-07-29T08:24:14,935 Added pybedtools==0.8.2 from https://files.pythonhosted.org/packages/5b/57/46e9c8135954550d1d3a05db5b0462a264239f7f71c78af304bb47c5c900/pybedtools-0.8.2.tar.gz#sha256=a184a36099458627e7ef52ea88218f7c00dc9c505b4256ece9ede58b1efa8771 to build tracker '/tmp/pip-req-tracker-5b7hej0y' 2021-07-29T08:24:14,936 Running setup.py (path:/tmp/pip-wheel-oh24djnt/pybedtools_e878d30dbfd2406eaf89e4514cb343fe/setup.py) egg_info for package pybedtools 2021-07-29T08:24:14,937 Created temporary directory: /tmp/pip-pip-egg-info-_0dj9u7d 2021-07-29T08:24:14,937 Running command python setup.py egg_info 2021-07-29T08:24:15,921 running egg_info 2021-07-29T08:24:15,923 creating /tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info 2021-07-29T08:24:15,924 writing /tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/PKG-INFO 2021-07-29T08:24:15,927 writing dependency_links to /tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/dependency_links.txt 2021-07-29T08:24:15,929 writing requirements to /tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/requires.txt 2021-07-29T08:24:15,930 writing top-level names to /tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/top_level.txt 2021-07-29T08:24:15,931 writing manifest file '/tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/SOURCES.txt' 2021-07-29T08:24:16,090 reading manifest file '/tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/SOURCES.txt' 2021-07-29T08:24:16,091 adding license file 'LICENSE.txt' 2021-07-29T08:24:16,095 writing manifest file '/tmp/pip-pip-egg-info-_0dj9u7d/pybedtools.egg-info/SOURCES.txt' 2021-07-29T08:24:16,168 Source in /tmp/pip-wheel-oh24djnt/pybedtools_e878d30dbfd2406eaf89e4514cb343fe has version 0.8.2, which satisfies requirement pybedtools==0.8.2 from https://files.pythonhosted.org/packages/5b/57/46e9c8135954550d1d3a05db5b0462a264239f7f71c78af304bb47c5c900/pybedtools-0.8.2.tar.gz#sha256=a184a36099458627e7ef52ea88218f7c00dc9c505b4256ece9ede58b1efa8771 2021-07-29T08:24:16,169 Removed pybedtools==0.8.2 from https://files.pythonhosted.org/packages/5b/57/46e9c8135954550d1d3a05db5b0462a264239f7f71c78af304bb47c5c900/pybedtools-0.8.2.tar.gz#sha256=a184a36099458627e7ef52ea88218f7c00dc9c505b4256ece9ede58b1efa8771 from build tracker '/tmp/pip-req-tracker-5b7hej0y' 2021-07-29T08:24:16,173 Created temporary directory: /tmp/pip-unpack-zefdcv81 2021-07-29T08:24:16,173 Building wheels for collected packages: pybedtools 2021-07-29T08:24:16,178 Created temporary directory: /tmp/pip-wheel-r5qinv0_ 2021-07-29T08:24:16,179 Building wheel for pybedtools (setup.py): started 2021-07-29T08:24:16,179 Destination directory: /tmp/pip-wheel-r5qinv0_ 2021-07-29T08:24:16,179 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-oh24djnt/pybedtools_e878d30dbfd2406eaf89e4514cb343fe/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-oh24djnt/pybedtools_e878d30dbfd2406eaf89e4514cb343fe/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-r5qinv0_ 2021-07-29T08:24:17,150 running bdist_wheel 2021-07-29T08:24:17,150 The [wheel] section is deprecated. Use [bdist_wheel] instead. 2021-07-29T08:24:17,153 running build 2021-07-29T08:24:17,153 running build_py 2021-07-29T08:24:17,295 creating build 2021-07-29T08:24:17,296 creating build/lib.linux-armv7l-3.9 2021-07-29T08:24:17,296 creating build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,297 copying pybedtools/filenames.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,299 copying pybedtools/settings.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,301 copying pybedtools/helpers.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,304 copying pybedtools/__init__.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,306 copying pybedtools/paths.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,308 copying pybedtools/logger.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,310 copying pybedtools/version.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,311 copying pybedtools/parallel.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,313 copying pybedtools/bedtool.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,319 copying pybedtools/stats.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,321 copying pybedtools/genome_registry.py -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,328 creating build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,329 copying pybedtools/test/test_cbedtools.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,332 copying pybedtools/test/__init__.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,334 copying pybedtools/test/test_1.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,338 copying pybedtools/test/test_contrib.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,340 copying pybedtools/test/test_pathlib.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,342 copying pybedtools/test/test_len_leak.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,344 copying pybedtools/test/genomepy_integration.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,347 copying pybedtools/test/test_iter.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,349 copying pybedtools/test/test_helpers.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,352 copying pybedtools/test/tfuncs.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,353 copying pybedtools/test/regression_tests.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,356 copying pybedtools/test/test_issues.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,359 copying pybedtools/test/test_gzip_support.py -> build/lib.linux-armv7l-3.9/pybedtools/test 2021-07-29T08:24:17,362 creating build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,362 copying pybedtools/contrib/intersection_matrix.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,365 copying pybedtools/contrib/__init__.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,367 copying pybedtools/contrib/plotting.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,370 copying pybedtools/contrib/long_range_interaction.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,373 copying pybedtools/contrib/venn_maker.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,376 copying pybedtools/contrib/bigbed.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,378 copying pybedtools/contrib/bigwig.py -> build/lib.linux-armv7l-3.9/pybedtools/contrib 2021-07-29T08:24:17,381 creating build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,382 copying pybedtools/test/data/__init__.py -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,383 running egg_info 2021-07-29T08:24:17,395 creating pybedtools.egg-info 2021-07-29T08:24:17,396 writing pybedtools.egg-info/PKG-INFO 2021-07-29T08:24:17,399 writing dependency_links to pybedtools.egg-info/dependency_links.txt 2021-07-29T08:24:17,401 writing requirements to pybedtools.egg-info/requires.txt 2021-07-29T08:24:17,402 writing top-level names to pybedtools.egg-info/top_level.txt 2021-07-29T08:24:17,404 writing manifest file 'pybedtools.egg-info/SOURCES.txt' 2021-07-29T08:24:17,412 reading manifest file 'pybedtools.egg-info/SOURCES.txt' 2021-07-29T08:24:17,414 adding license file 'LICENSE.txt' 2021-07-29T08:24:17,417 writing manifest file 'pybedtools.egg-info/SOURCES.txt' 2021-07-29T08:24:17,433 copying pybedtools/cbedtools.cpp -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,466 copying pybedtools/featurefuncs.cpp -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,484 creating build/lib.linux-armv7l-3.9/pybedtools/include 2021-07-29T08:24:17,486 copying pybedtools/include/bedFile.cpp -> build/lib.linux-armv7l-3.9/pybedtools/include 2021-07-29T08:24:17,491 copying pybedtools/include/fileType.cpp -> build/lib.linux-armv7l-3.9/pybedtools/include 2021-07-29T08:24:17,493 copying pybedtools/include/gzstream.cpp -> build/lib.linux-armv7l-3.9/pybedtools/include 2021-07-29T08:24:17,496 copying pybedtools/test/data/gdc.gff -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,498 copying pybedtools/test/data/small.fastq -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,501 copying pybedtools/test/data/bedpe2.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,503 copying pybedtools/test/data/tag_test1.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,506 copying pybedtools/test/data/mm9.bed12 -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,508 copying pybedtools/test/data/gdc.1.100.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,511 copying pybedtools/test/data/x.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,562 copying pybedtools/test/data/venn.c.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,564 copying pybedtools/test/data/issue_121.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,566 copying pybedtools/test/data/m1.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,569 copying pybedtools/test/data/a.bed.gz.tbi -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,571 copying pybedtools/test/data/hg38-problem.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,574 copying pybedtools/test/data/b.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,577 copying pybedtools/test/data/y.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,579 copying pybedtools/test/data/small.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,582 copying pybedtools/test/data/snps.bed.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,742 copying pybedtools/test/data/v.vcf -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,744 copying pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,748 copying pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,753 copying pybedtools/test/data/democonfig.yaml -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,755 copying pybedtools/test/data/gdc.sorted.bam.bai -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,757 copying pybedtools/test/data/gdc.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,759 copying pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,771 copying pybedtools/test/data/gdc.1.100.bam.bai -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,773 copying pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,778 copying pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,794 copying pybedtools/test/data/gdc.othersort.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,796 copying pybedtools/test/data/genome.fa -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,799 copying pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,804 copying pybedtools/test/data/test.fa -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,806 copying pybedtools/test/data/gdc.sorted.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,809 copying pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,816 copying pybedtools/test/data/gdc.cram -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,818 copying pybedtools/test/data/x.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,883 copying pybedtools/test/data/gdc.gff.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,885 copying pybedtools/test/data/expand_test.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,887 copying pybedtools/test/data/hg38-base.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,889 copying pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,891 copying pybedtools/test/data/test.fa.fai -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,894 copying pybedtools/test/data/1000genomes-example.vcf.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,896 copying pybedtools/test/data/vcf-stderr-test.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,898 copying pybedtools/test/data/venn.b.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,901 copying pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,906 copying pybedtools/test/data/test_peaks.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,908 copying pybedtools/test/data/gdc.50.200.bam.bai -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,911 copying pybedtools/test/data/a.igv_script -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,914 copying pybedtools/test/data/164.gtf -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,916 copying pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,922 copying pybedtools/test/data/a.links.html -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,924 copying pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,928 copying pybedtools/test/data/gdc.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,930 copying pybedtools/test/data/a.bed.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,933 copying pybedtools/test/data/issue319.out.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,941 copying pybedtools/test/data/test_bedpe.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,943 copying pybedtools/test/data/hg19.gff -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,952 copying pybedtools/test/data/1000genomes-example.vcf -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,955 copying pybedtools/test/data/tag_test2.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,957 copying pybedtools/test/data/vcf-stderr-test.vcf -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,960 copying pybedtools/test/data/issue319.vcf.gz -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,963 copying pybedtools/test/data/d.gff -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,966 copying pybedtools/test/data/exons.gff -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,968 copying pybedtools/test/data/multibamcov_test.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,971 copying pybedtools/test/data/test_tsses.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,973 copying pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,978 copying pybedtools/test/data/reads.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,980 copying pybedtools/test/data/gdc.50.200.bam -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,982 copying pybedtools/test/data/a.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,984 copying pybedtools/test/data/c.gff -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,987 copying pybedtools/test/data/bedpe.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,989 copying pybedtools/test/data/issue319.bed -> build/lib.linux-armv7l-3.9/pybedtools/test/data 2021-07-29T08:24:17,992 copying pybedtools/_Window.pyx -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,994 copying pybedtools/featurefuncs.pyx -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:17,997 copying pybedtools/cbedtools.pyx -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:18,001 copying pybedtools/cbedtools.pxd -> build/lib.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:18,007 running build_ext 2021-07-29T08:24:18,012 building 'pybedtools.cbedtools' extension 2021-07-29T08:24:18,013 creating build/temp.linux-armv7l-3.9 2021-07-29T08:24:18,013 creating build/temp.linux-armv7l-3.9/pybedtools 2021-07-29T08:24:18,014 creating build/temp.linux-armv7l-3.9/pybedtools/include 2021-07-29T08:24:18,015 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/cbedtools.cpp -o build/temp.linux-armv7l-3.9/pybedtools/cbedtools.o 2021-07-29T08:24:42,069 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/include/bedFile.cpp -o build/temp.linux-armv7l-3.9/pybedtools/include/bedFile.o 2021-07-29T08:24:49,882 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/include/fileType.cpp -o build/temp.linux-armv7l-3.9/pybedtools/include/fileType.o 2021-07-29T08:24:51,240 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/include/gzstream.cpp -o build/temp.linux-armv7l-3.9/pybedtools/include/gzstream.o 2021-07-29T08:24:52,699 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pybedtools/cbedtools.o build/temp.linux-armv7l-3.9/pybedtools/include/bedFile.o build/temp.linux-armv7l-3.9/pybedtools/include/fileType.o build/temp.linux-armv7l-3.9/pybedtools/include/gzstream.o -lstdc++ -lz -o build/lib.linux-armv7l-3.9/pybedtools/cbedtools.cpython-39-arm-linux-gnueabihf.so 2021-07-29T08:24:53,220 building 'pybedtools.featurefuncs' extension 2021-07-29T08:24:53,220 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/featurefuncs.cpp -o build/temp.linux-armv7l-3.9/pybedtools/featurefuncs.o 2021-07-29T08:25:03,708 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/include/bedFile.cpp -o build/temp.linux-armv7l-3.9/pybedtools/include/bedFile.o 2021-07-29T08:25:11,626 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/include/fileType.cpp -o build/temp.linux-armv7l-3.9/pybedtools/include/fileType.o 2021-07-29T08:25:12,996 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipybedtools/include/ -I/usr/include/python3.9 -c pybedtools/include/gzstream.cpp -o build/temp.linux-armv7l-3.9/pybedtools/include/gzstream.o 2021-07-29T08:25:14,445 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pybedtools/featurefuncs.o build/temp.linux-armv7l-3.9/pybedtools/include/bedFile.o build/temp.linux-armv7l-3.9/pybedtools/include/fileType.o build/temp.linux-armv7l-3.9/pybedtools/include/gzstream.o -lstdc++ -lz -o build/lib.linux-armv7l-3.9/pybedtools/featurefuncs.cpython-39-arm-linux-gnueabihf.so 2021-07-29T08:25:14,832 installing to build/bdist.linux-armv7l/wheel 2021-07-29T08:25:14,832 running install 2021-07-29T08:25:14,833 running install_lib 2021-07-29T08:25:14,837 creating build/bdist.linux-armv7l 2021-07-29T08:25:14,838 creating build/bdist.linux-armv7l/wheel 2021-07-29T08:25:14,839 creating build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:14,840 copying build/lib.linux-armv7l-3.9/pybedtools/filenames.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:14,842 copying build/lib.linux-armv7l-3.9/pybedtools/settings.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:14,844 copying build/lib.linux-armv7l-3.9/pybedtools/_Window.pyx -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:14,847 copying build/lib.linux-armv7l-3.9/pybedtools/helpers.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:14,850 copying build/lib.linux-armv7l-3.9/pybedtools/featurefuncs.cpp -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:14,864 creating build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,865 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_cbedtools.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,868 copying build/lib.linux-armv7l-3.9/pybedtools/test/__init__.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,870 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_1.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,874 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_contrib.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,876 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_pathlib.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,879 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_len_leak.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,881 copying build/lib.linux-armv7l-3.9/pybedtools/test/genomepy_integration.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,883 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_iter.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:14,888 creating build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,889 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.gff -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,891 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/small.fastq -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,893 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/bedpe2.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,896 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/tag_test1.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,898 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/mm9.bed12 -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,900 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.1.100.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,902 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/x.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,949 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/venn.c.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,951 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/issue_121.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,953 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/m1.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,955 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/a.bed.gz.tbi -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,957 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/hg38-problem.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,958 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/__init__.py -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,960 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/b.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,962 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/y.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,964 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/small.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:14,966 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/snps.bed.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,113 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/v.vcf -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,115 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,119 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,123 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/democonfig.yaml -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,125 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.sorted.bam.bai -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,127 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,129 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,144 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.1.100.bam.bai -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,146 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,151 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,164 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.othersort.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,166 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/genome.fa -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,168 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,172 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/test.fa -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,174 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.sorted.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,176 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,181 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.cram -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,183 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/x.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,244 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.gff.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,246 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/expand_test.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,247 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/hg38-base.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,249 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,251 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/test.fa.fai -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,253 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/1000genomes-example.vcf.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,255 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/vcf-stderr-test.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,257 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/venn.b.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,259 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,263 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/test_peaks.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,265 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.50.200.bam.bai -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,267 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/a.igv_script -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,269 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/164.gtf -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,271 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,276 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/a.links.html -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,278 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,281 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,283 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/a.bed.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,285 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/issue319.out.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,292 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/test_bedpe.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,294 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/hg19.gff -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,304 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/1000genomes-example.vcf -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,306 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/tag_test2.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,308 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/vcf-stderr-test.vcf -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,310 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/issue319.vcf.gz -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,314 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/d.gff -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,316 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/exons.gff -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,318 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/multibamcov_test.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,320 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/test_tsses.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,322 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,326 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/reads.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,328 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/gdc.50.200.bam -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,330 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/a.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,332 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/c.gff -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,334 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/bedpe.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,336 copying build/lib.linux-armv7l-3.9/pybedtools/test/data/issue319.bed -> build/bdist.linux-armv7l/wheel/pybedtools/test/data 2021-07-29T08:25:15,338 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_helpers.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:15,340 copying build/lib.linux-armv7l-3.9/pybedtools/test/tfuncs.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:15,342 copying build/lib.linux-armv7l-3.9/pybedtools/test/regression_tests.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:15,344 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_issues.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:15,347 copying build/lib.linux-armv7l-3.9/pybedtools/test/test_gzip_support.py -> build/bdist.linux-armv7l/wheel/pybedtools/test 2021-07-29T08:25:15,349 copying build/lib.linux-armv7l-3.9/pybedtools/__init__.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,351 copying build/lib.linux-armv7l-3.9/pybedtools/paths.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,353 copying build/lib.linux-armv7l-3.9/pybedtools/logger.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,355 copying build/lib.linux-armv7l-3.9/pybedtools/cbedtools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,418 copying build/lib.linux-armv7l-3.9/pybedtools/version.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,420 copying build/lib.linux-armv7l-3.9/pybedtools/parallel.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,422 copying build/lib.linux-armv7l-3.9/pybedtools/featurefuncs.pyx -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,424 copying build/lib.linux-armv7l-3.9/pybedtools/cbedtools.cpp -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,456 copying build/lib.linux-armv7l-3.9/pybedtools/cbedtools.pyx -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,459 creating build/bdist.linux-armv7l/wheel/pybedtools/include 2021-07-29T08:25:15,460 copying build/lib.linux-armv7l-3.9/pybedtools/include/fileType.cpp -> build/bdist.linux-armv7l/wheel/pybedtools/include 2021-07-29T08:25:15,462 copying build/lib.linux-armv7l-3.9/pybedtools/include/gzstream.cpp -> build/bdist.linux-armv7l/wheel/pybedtools/include 2021-07-29T08:25:15,464 copying build/lib.linux-armv7l-3.9/pybedtools/include/bedFile.cpp -> build/bdist.linux-armv7l/wheel/pybedtools/include 2021-07-29T08:25:15,466 copying build/lib.linux-armv7l-3.9/pybedtools/bedtool.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,472 creating build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,473 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/intersection_matrix.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,475 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/__init__.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,477 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/plotting.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,480 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/long_range_interaction.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,482 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/venn_maker.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,485 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/bigbed.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,487 copying build/lib.linux-armv7l-3.9/pybedtools/contrib/bigwig.py -> build/bdist.linux-armv7l/wheel/pybedtools/contrib 2021-07-29T08:25:15,489 copying build/lib.linux-armv7l-3.9/pybedtools/cbedtools.pxd -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,491 copying build/lib.linux-armv7l-3.9/pybedtools/featurefuncs.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,533 copying build/lib.linux-armv7l-3.9/pybedtools/stats.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,535 copying build/lib.linux-armv7l-3.9/pybedtools/genome_registry.py -> build/bdist.linux-armv7l/wheel/pybedtools 2021-07-29T08:25:15,540 running install_egg_info 2021-07-29T08:25:15,548 Copying pybedtools.egg-info to build/bdist.linux-armv7l/wheel/pybedtools-0.8.2-py3.9.egg-info 2021-07-29T08:25:15,563 running install_scripts 2021-07-29T08:25:15,645 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2021-07-29T08:25:15,650 creating build/bdist.linux-armv7l/wheel/pybedtools-0.8.2.dist-info/WHEEL 2021-07-29T08:25:15,652 creating '/tmp/pip-wheel-r5qinv0_/pybedtools-0.8.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-29T08:25:15,655 adding 'pybedtools/_Window.pyx' 2021-07-29T08:25:15,657 adding 'pybedtools/__init__.py' 2021-07-29T08:25:15,678 adding 'pybedtools/bedtool.py' 2021-07-29T08:25:15,750 adding 'pybedtools/cbedtools.cpp' 2021-07-29T08:25:16,262 adding 'pybedtools/cbedtools.cpython-39-arm-linux-gnueabihf.so' 2021-07-29T08:25:16,285 adding 'pybedtools/cbedtools.pxd' 2021-07-29T08:25:16,289 adding 'pybedtools/cbedtools.pyx' 2021-07-29T08:25:16,326 adding 'pybedtools/featurefuncs.cpp' 2021-07-29T08:25:16,617 adding 'pybedtools/featurefuncs.cpython-39-arm-linux-gnueabihf.so' 2021-07-29T08:25:16,632 adding 'pybedtools/featurefuncs.pyx' 2021-07-29T08:25:16,633 adding 'pybedtools/filenames.py' 2021-07-29T08:25:16,642 adding 'pybedtools/genome_registry.py' 2021-07-29T08:25:16,647 adding 'pybedtools/helpers.py' 2021-07-29T08:25:16,648 adding 'pybedtools/logger.py' 2021-07-29T08:25:16,650 adding 'pybedtools/parallel.py' 2021-07-29T08:25:16,651 adding 'pybedtools/paths.py' 2021-07-29T08:25:16,653 adding 'pybedtools/settings.py' 2021-07-29T08:25:16,654 adding 'pybedtools/stats.py' 2021-07-29T08:25:16,655 adding 'pybedtools/version.py' 2021-07-29T08:25:16,657 adding 'pybedtools/contrib/__init__.py' 2021-07-29T08:25:16,658 adding 'pybedtools/contrib/bigbed.py' 2021-07-29T08:25:16,660 adding 'pybedtools/contrib/bigwig.py' 2021-07-29T08:25:16,662 adding 'pybedtools/contrib/intersection_matrix.py' 2021-07-29T08:25:16,664 adding 'pybedtools/contrib/long_range_interaction.py' 2021-07-29T08:25:16,667 adding 'pybedtools/contrib/plotting.py' 2021-07-29T08:25:16,670 adding 'pybedtools/contrib/venn_maker.py' 2021-07-29T08:25:16,672 adding 'pybedtools/include/bedFile.cpp' 2021-07-29T08:25:16,674 adding 'pybedtools/include/fileType.cpp' 2021-07-29T08:25:16,675 adding 'pybedtools/include/gzstream.cpp' 2021-07-29T08:25:16,677 adding 'pybedtools/test/__init__.py' 2021-07-29T08:25:16,679 adding 'pybedtools/test/genomepy_integration.py' 2021-07-29T08:25:16,680 adding 'pybedtools/test/regression_tests.py' 2021-07-29T08:25:16,687 adding 'pybedtools/test/test_1.py' 2021-07-29T08:25:16,689 adding 'pybedtools/test/test_cbedtools.py' 2021-07-29T08:25:16,691 adding 'pybedtools/test/test_contrib.py' 2021-07-29T08:25:16,693 adding 'pybedtools/test/test_gzip_support.py' 2021-07-29T08:25:16,695 adding 'pybedtools/test/test_helpers.py' 2021-07-29T08:25:16,698 adding 'pybedtools/test/test_issues.py' 2021-07-29T08:25:16,700 adding 'pybedtools/test/test_iter.py' 2021-07-29T08:25:16,701 adding 'pybedtools/test/test_len_leak.py' 2021-07-29T08:25:16,703 adding 'pybedtools/test/test_pathlib.py' 2021-07-29T08:25:16,704 adding 'pybedtools/test/tfuncs.py' 2021-07-29T08:25:16,707 adding 'pybedtools/test/data/1000genomes-example.vcf' 2021-07-29T08:25:16,708 adding 'pybedtools/test/data/1000genomes-example.vcf.gz' 2021-07-29T08:25:16,709 adding 'pybedtools/test/data/164.gtf' 2021-07-29T08:25:16,724 adding 'pybedtools/test/data/BEAF_Kc_Bushey_2009.bed' 2021-07-29T08:25:16,739 adding 'pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed' 2021-07-29T08:25:16,749 adding 'pybedtools/test/data/CTCF_Kc_Bushey_2009.bed' 2021-07-29T08:25:16,761 adding 'pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed' 2021-07-29T08:25:16,785 adding 'pybedtools/test/data/Cp190_Kc_Bushey_2009.bed' 2021-07-29T08:25:16,808 adding 'pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed' 2021-07-29T08:25:16,825 adding 'pybedtools/test/data/SuHw_Kc_Bushey_2009.bed' 2021-07-29T08:25:16,840 adding 'pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed' 2021-07-29T08:25:16,842 adding 'pybedtools/test/data/__init__.py' 2021-07-29T08:25:16,843 adding 'pybedtools/test/data/a.bed' 2021-07-29T08:25:16,844 adding 'pybedtools/test/data/a.bed.gz' 2021-07-29T08:25:16,845 adding 'pybedtools/test/data/a.bed.gz.tbi' 2021-07-29T08:25:16,846 adding 'pybedtools/test/data/a.igv_script' 2021-07-29T08:25:16,847 adding 'pybedtools/test/data/a.links.html' 2021-07-29T08:25:16,848 adding 'pybedtools/test/data/b.bed' 2021-07-29T08:25:16,849 adding 'pybedtools/test/data/bedpe.bed' 2021-07-29T08:25:16,850 adding 'pybedtools/test/data/bedpe2.bed' 2021-07-29T08:25:16,851 adding 'pybedtools/test/data/c.gff' 2021-07-29T08:25:16,853 adding 'pybedtools/test/data/d.gff' 2021-07-29T08:25:16,854 adding 'pybedtools/test/data/democonfig.yaml' 2021-07-29T08:25:16,902 adding 'pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz' 2021-07-29T08:25:16,951 adding 'pybedtools/test/data/dm3-chr2L-5M.gff.gz' 2021-07-29T08:25:16,955 adding 'pybedtools/test/data/exons.gff' 2021-07-29T08:25:16,956 adding 'pybedtools/test/data/expand_test.bed' 2021-07-29T08:25:16,957 adding 'pybedtools/test/data/gdc.1.100.bam' 2021-07-29T08:25:16,958 adding 'pybedtools/test/data/gdc.1.100.bam.bai' 2021-07-29T08:25:16,959 adding 'pybedtools/test/data/gdc.50.200.bam' 2021-07-29T08:25:16,960 adding 'pybedtools/test/data/gdc.50.200.bam.bai' 2021-07-29T08:25:16,961 adding 'pybedtools/test/data/gdc.bam' 2021-07-29T08:25:16,962 adding 'pybedtools/test/data/gdc.bed' 2021-07-29T08:25:16,964 adding 'pybedtools/test/data/gdc.cram' 2021-07-29T08:25:16,965 adding 'pybedtools/test/data/gdc.gff' 2021-07-29T08:25:16,966 adding 'pybedtools/test/data/gdc.gff.gz' 2021-07-29T08:25:16,967 adding 'pybedtools/test/data/gdc.othersort.bam' 2021-07-29T08:25:16,968 adding 'pybedtools/test/data/gdc.sorted.bam' 2021-07-29T08:25:16,969 adding 'pybedtools/test/data/gdc.sorted.bam.bai' 2021-07-29T08:25:16,970 adding 'pybedtools/test/data/genome.fa' 2021-07-29T08:25:16,996 adding 'pybedtools/test/data/hg19.gff' 2021-07-29T08:25:16,999 adding 'pybedtools/test/data/hg38-base.bed' 2021-07-29T08:25:17,000 adding 'pybedtools/test/data/hg38-problem.bed' 2021-07-29T08:25:17,001 adding 'pybedtools/test/data/issue319.bed' 2021-07-29T08:25:17,012 adding 'pybedtools/test/data/issue319.out.bed' 2021-07-29T08:25:17,016 adding 'pybedtools/test/data/issue319.vcf.gz' 2021-07-29T08:25:17,018 adding 'pybedtools/test/data/issue_121.bam' 2021-07-29T08:25:17,019 adding 'pybedtools/test/data/m1.bed' 2021-07-29T08:25:17,020 adding 'pybedtools/test/data/mm9.bed12' 2021-07-29T08:25:17,021 adding 'pybedtools/test/data/multibamcov_test.bed' 2021-07-29T08:25:17,022 adding 'pybedtools/test/data/reads.bam' 2021-07-29T08:25:17,029 adding 'pybedtools/test/data/rmsk.hg18.chr21.small.bed' 2021-07-29T08:25:17,031 adding 'pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz' 2021-07-29T08:25:17,032 adding 'pybedtools/test/data/small.bam' 2021-07-29T08:25:17,034 adding 'pybedtools/test/data/small.fastq' 2021-07-29T08:25:17,974 adding 'pybedtools/test/data/snps.bed.gz' 2021-07-29T08:25:18,043 adding 'pybedtools/test/data/tag_test1.bed' 2021-07-29T08:25:18,045 adding 'pybedtools/test/data/tag_test2.bed' 2021-07-29T08:25:18,046 adding 'pybedtools/test/data/test.fa' 2021-07-29T08:25:18,047 adding 'pybedtools/test/data/test.fa.fai' 2021-07-29T08:25:18,048 adding 'pybedtools/test/data/test_bedpe.bed' 2021-07-29T08:25:18,049 adding 'pybedtools/test/data/test_peaks.bed' 2021-07-29T08:25:18,050 adding 'pybedtools/test/data/test_tsses.bed' 2021-07-29T08:25:18,052 adding 'pybedtools/test/data/v.vcf' 2021-07-29T08:25:18,053 adding 'pybedtools/test/data/vcf-stderr-test.bed' 2021-07-29T08:25:18,054 adding 'pybedtools/test/data/vcf-stderr-test.vcf' 2021-07-29T08:25:18,056 adding 'pybedtools/test/data/venn.b.bed' 2021-07-29T08:25:18,057 adding 'pybedtools/test/data/venn.c.bed' 2021-07-29T08:25:18,266 adding 'pybedtools/test/data/x.bam' 2021-07-29T08:25:18,627 adding 'pybedtools/test/data/x.bed' 2021-07-29T08:25:18,648 adding 'pybedtools/test/data/y.bam' 2021-07-29T08:25:18,650 adding 'pybedtools-0.8.2.dist-info/LICENSE.txt' 2021-07-29T08:25:18,652 adding 'pybedtools-0.8.2.dist-info/METADATA' 2021-07-29T08:25:18,652 adding 'pybedtools-0.8.2.dist-info/WHEEL' 2021-07-29T08:25:18,653 adding 'pybedtools-0.8.2.dist-info/top_level.txt' 2021-07-29T08:25:18,655 adding 'pybedtools-0.8.2.dist-info/RECORD' 2021-07-29T08:25:18,822 removing build/bdist.linux-armv7l/wheel 2021-07-29T08:25:18,953 Building wheel for pybedtools (setup.py): finished with status 'done' 2021-07-29T08:25:19,128 Created wheel for pybedtools: filename=pybedtools-0.8.2-cp39-cp39-linux_armv7l.whl size=13990223 sha256=07a180e8ec94b79db1ecf18795ded10f9fafcb7586dd2ac3fc183059d9e20192 2021-07-29T08:25:19,129 Stored in directory: /tmp/pip-ephem-wheel-cache-nfthm8ow/wheels/f0/9d/2a/2527af2ef181e469f2fcc0f3ce7152bc80a402ad7a812c53ba 2021-07-29T08:25:19,148 Successfully built pybedtools 2021-07-29T08:25:19,613 Removed build tracker: '/tmp/pip-req-tracker-5b7hej0y'