2021-07-29T09:53:31,382 Created temporary directory: /tmp/pip-ephem-wheel-cache-fzvhfded 2021-07-29T09:53:31,386 Created temporary directory: /tmp/pip-req-tracker-qlt42gfw 2021-07-29T09:53:31,386 Initialized build tracking at /tmp/pip-req-tracker-qlt42gfw 2021-07-29T09:53:31,386 Created build tracker: /tmp/pip-req-tracker-qlt42gfw 2021-07-29T09:53:31,387 Entered build tracker: /tmp/pip-req-tracker-qlt42gfw 2021-07-29T09:53:31,387 Created temporary directory: /tmp/pip-wheel-fzd27w3q 2021-07-29T09:53:31,418 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-29T09:53:31,418 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-29T09:53:31,418 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-29T09:53:31,419 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-29T09:53:31,419 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-29T09:53:31,421 WARNING: Location '/galaxy-ml/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T09:53:31,422 WARNING: Location 't/galaxy-ml/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T09:53:31,422 WARNING: Location 'm/galaxy-ml/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T09:53:31,422 WARNING: Location 'p/galaxy-ml/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T09:53:31,423 1 location(s) to search for versions of galaxy-ml: 2021-07-29T09:53:31,423 * https://pypi.org/simple/galaxy-ml/ 2021-07-29T09:53:31,423 Fetching project page and analyzing links: https://pypi.org/simple/galaxy-ml/ 2021-07-29T09:53:31,423 Getting page https://pypi.org/simple/galaxy-ml/ 2021-07-29T09:53:31,425 Found index url https://pypi.org/simple 2021-07-29T09:53:31,620 Found link https://files.pythonhosted.org/packages/e0/a9/5bd8e6abeed6931ac32b6fd513286e6f55f53e577d9fff5249e91f8404fe/Galaxy-ML-0.7.3.tar.gz#sha256=a958bd6d8e053eb591bed7fd3e96f694592d90ad4be59926f80a10c5b857c5a5 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.3 2021-07-29T09:53:31,620 Found link https://files.pythonhosted.org/packages/03/8f/f56548fcf4b97aae990ba7dffb23019d6e23669bb86093f7a973b3362474/Galaxy-ML-0.7.3.1.tar.gz#sha256=ab4f139cda97e449632f1d00e32b2057ebfa0793dcb403c161f0fcbbb60e7660 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.3.1 2021-07-29T09:53:31,621 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/38/ff/70d848c0661c78c0fd299f4f3d61e8b50a5c22788ac8dad59fea25197210/Galaxy_ML-0.7.3.1-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=c9dba338596f92efc89074c5ae6d30e7cca506df81e0cb4df1fb880c3049c9e3 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,621 Found link https://files.pythonhosted.org/packages/ce/dd/95d37649cc27a6671018ed0e1280b34ab195bf05a0a33a218254c0ca9db0/Galaxy-ML-0.7.4.tar.gz#sha256=ba57a6cef9d5a740408ec74d37b531e80d978f1e5bdaf60eded523fc900945fd (from https://pypi.org/simple/galaxy-ml/), version: 0.7.4 2021-07-29T09:53:31,621 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/be/40/13401dfecc3186e8f40093c17c6b4b289cdeb0eaa323e0e0ae5f8734e82a/Galaxy_ML-0.7.4-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=946738d623c970ce66d6bf05f5b57067daeeac3b81c19221b1e1f66abdf57113 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,622 Found link https://files.pythonhosted.org/packages/e5/33/6d4a99adf50ba2c421340e7a094f023d20e91c4a635cb45448f5c69493cd/Galaxy-ML-0.7.4.1.tar.gz#sha256=1e22594b9c8e6a27141cfb887f9a37ebe48025db50ee834b933c66a6844a2617 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.4.1 2021-07-29T09:53:31,622 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/ea/06/2d1e1323e6c6b0a9e5049273b8fd3639590571aca9d898e8f572b86d18f7/Galaxy_ML-0.7.4.1-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=6600cb36d5aec2a7bfa7db2212ed9a4be607f357f31a4f1b2495ff4f175a5d70 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,622 Found link https://files.pythonhosted.org/packages/a6/73/d54232e0b4f77e9700e7745ceca16f4284f155664d51f2a49288d03d3dbc/Galaxy-ML-0.7.5.tar.gz#sha256=d60f4bf600216172fed7dd64188e4c8e3bf4fd44462b4b1df28893ce758de0b4 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.5 2021-07-29T09:53:31,622 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/61/2c/53e963e7aa751d742c530994befa29a649d994b88d996ae8171be97071ba/Galaxy_ML-0.7.5-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=777e33030c9726a26b41af1abfcf0a014b5053ae5664eaea781eb085ffb56c5d (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,623 Found link https://files.pythonhosted.org/packages/eb/cb/ce97742a81601324619c786c163db1baba65e5561cfdb2d3982f79217945/Galaxy-ML-0.7.7.tar.gz#sha256=f964f9376c640f9086a3a825b70bb1f5acbcbb22a105f97225fe4454fd2a9517 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.7 2021-07-29T09:53:31,623 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/18/22/8c858e066e9eb1eb9e325b2faa3dbef2470ffd11b20e1db7b0cdb531370c/Galaxy_ML-0.7.7-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=8531b2ed1b0234046ed9cc58fe5eb4e145a71173994fb1bb7808956f1e9208be (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,623 Found link https://files.pythonhosted.org/packages/eb/3f/a268290ca84583df278b951a4ab8fca0bf2f9f0c321d310b79011f154f2d/Galaxy-ML-0.7.8.tar.gz#sha256=b22d092828603967c057a58d80b8d50cb18709029e57cc8eacac8eb28ade3dd8 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.8 2021-07-29T09:53:31,623 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/4d/08/2c7d784c66c4aa9b70ef9819e4bfc77e7de84c62fcb429666ad8c4595c55/Galaxy_ML-0.7.8-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=c5cb62fd7a758241f6022ae17775d7acaeda3d779887ca0dad151ccf3ac70652 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,624 Found link https://files.pythonhosted.org/packages/a8/52/f6c6e91cda7272a201db127b6c7bbb3c8dd8c28bf6d49bd81fb031ddf353/Galaxy-ML-0.7.9.tar.gz#sha256=1baff3e0ec784a7b4db5951a82f2bc3aa1cda5b18af181c369e98dd75bef2068 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.9 2021-07-29T09:53:31,624 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/a8/31/36f775f8f8b0f830fbe4d45e29f1c2d1ff46cf88ff4487d1b68fbf685ade/Galaxy_ML-0.7.9-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=b6853bcdba2fe164a96508be10990c645ff071d7a94a6d4a0e4158a372b61edf (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,624 Found link https://files.pythonhosted.org/packages/1d/3b/25a29b91c3f12f3c9c829afb1123cf540b2f7adb516f1e6b2c28fb202ab2/Galaxy-ML-0.7.10.tar.gz#sha256=1d5b8335b3da68273b35f922db7ff01492e674d82985337fbd12a9049e1745a8 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.10 2021-07-29T09:53:31,624 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/02/ff/9742fadee3c536ffdf5f3c0841ad98dd325210544d2afd290b525c1b3094/Galaxy_ML-0.7.10-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=229d99cda5faa6775359d0f083be8b7b073ee4328370ca8bf14bf4855a31d900 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,625 Found link https://files.pythonhosted.org/packages/1d/4b/b913c09f165d6f89ad8701078bcafecd88bba25f504f34fd2de5d274d67d/Galaxy-ML-0.7.11.tar.gz#sha256=3cf0685422295d6501431de4c006ce2a80e79c55e94e039af3cee13e90990e40 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.11 2021-07-29T09:53:31,625 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/1c/7b/c23617cdc8e70447fdf515caa9cccc3afc8d36f813856dc75d012d977757/Galaxy_ML-0.7.11-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=e9c0384680f1b8bd7596f73763561644b9994f34a3d07f1e8109da66b3ce50cd (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,625 Found link https://files.pythonhosted.org/packages/22/c4/d7bedde63333a7ed2662b2b1e50d2d337d32da863fd61b35161999aee8bf/Galaxy-ML-0.7.12.tar.gz#sha256=39354c61fd0a06a31f3abc7cd3b74598f9f5153a5382a745c81b67d28c77f2f3 (from https://pypi.org/simple/galaxy-ml/), version: 0.7.12 2021-07-29T09:53:31,625 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/5b/7e/d4e620ed9b40b0ad5f226e133a53b99b1cc5c1570401d04e9d5495191932/Galaxy_ML-0.7.12-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=691ae729461a75ae3393d9fd1fc55b2a23d84a960a004d5dc654d069977e148c (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,626 Found link https://files.pythonhosted.org/packages/18/df/bf57e9f6bd5e0b3448c8136b8b58303ffec8b0114c36c6a681e8c7b940cd/Galaxy-ML-0.8.0.tar.gz#sha256=e1a55d2b2eefd10c1e5d52d5da5b2f60d19da8178cee902b13e375d4412c9d76 (from https://pypi.org/simple/galaxy-ml/), version: 0.8.0 2021-07-29T09:53:31,626 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/49/48/acfaf87e62b17fc9fadc8317d72a4a293cf041c6853e1c47b159f213b02d/Galaxy_ML-0.8.0-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=00fa16ea6b248d8179f5cfb9e61faaa223293be56a94cdb39a5538c2d1e64991 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,626 Found link https://files.pythonhosted.org/packages/d0/5e/c02f87fc2cdd2336795c166b1febcf4c2c4287996fec956ac43869c78f4e/Galaxy-ML-0.8.1.tar.gz#sha256=ff8c45d24c050ea380416fe604211d1d23d7e6fee7af118a8362b2734a98e494 (from https://pypi.org/simple/galaxy-ml/), version: 0.8.1 2021-07-29T09:53:31,626 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/2b/05/8fc243cd2c14e86e8a44547c91f39f8e2e7f9cde9d71f5d21a47c76e5453/Galaxy_ML-0.8.1-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=33f839b60283e192f962423455e4cec2b277ce9362231ce80ab8bb91e7c78ebe (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,627 Found link https://files.pythonhosted.org/packages/67/d1/be5a2d07b666c4d11c2cd3dc5d0d3df79dfbbd151ed00addb84ed0be2e75/Galaxy-ML-0.8.2.tar.gz#sha256=018bab54a3e1ddd8e53758af8a705df0207451c5f07aa326f1b505b5629bbdd8 (from https://pypi.org/simple/galaxy-ml/), version: 0.8.2 2021-07-29T09:53:31,627 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/87/36/07d2163d724536b61aca5f395b673a64d0a899f6b68dd1d7df6cd1a7d4cf/Galaxy_ML-0.8.2-cp36-cp36m-macosx_10_7_x86_64.whl#sha256=1e84681e2c93cc827f522be3d6f63592ef8adcfd5e7886a2c833ab952e127fd7 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,627 Found link https://files.pythonhosted.org/packages/99/9f/0291a1d01755fe27db3841aadf1e39ce8ae5c03121ac1843790314447fa4/Galaxy-ML-0.8.3.tar.gz#sha256=a40d7b304e9b7e2f31366895986b2091f30530be9a739553d60d69d58f7b00bd (from https://pypi.org/simple/galaxy-ml/), version: 0.8.3 2021-07-29T09:53:31,627 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/c5/df/c046478fee2a0205277ade0613e21d19c13ee5d6ce0e3f8fe8471f03e807/Galaxy_ML-0.8.3-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=f943f149356a501bacbacd5ca6e9f4ab03240414b03cc3a18adab6a3d3284a99 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,628 Found link https://files.pythonhosted.org/packages/49/7b/57f4fd6cf6c2ddc742646f7891ac24741f9cbb47659f757c33a751486184/Galaxy-ML-0.9.0.tar.gz#sha256=aa85d1dba15fe3e427b2efc7e2e6b154b70c6584e4b9b8a806ff8b3448657443 (from https://pypi.org/simple/galaxy-ml/), version: 0.9.0 2021-07-29T09:53:31,628 Skipping link: No binaries permitted for galaxy-ml: https://files.pythonhosted.org/packages/f8/4b/eedb0e423d5c505b2655a3afa202592f3dc28b273a250de8bda2cb3aa4af/Galaxy_ML-0.9.0-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=3564a0d7fe4f55dbf10c14dc7084d9aca9404e3e3115fb02804283a4f855e670 (from https://pypi.org/simple/galaxy-ml/) 2021-07-29T09:53:31,628 Skipping link: not a file: https://pypi.org/simple/galaxy-ml/ 2021-07-29T09:53:31,648 Given no hashes to check 1 links for project 'galaxy-ml': discarding no candidates 2021-07-29T09:53:31,666 Collecting galaxy-ml==0.8.3 2021-07-29T09:53:31,667 Created temporary directory: /tmp/pip-unpack-emdiat59 2021-07-29T09:53:31,856 Downloading Galaxy-ML-0.8.3.tar.gz (186 kB) 2021-07-29T09:53:32,106 Added galaxy-ml==0.8.3 from https://files.pythonhosted.org/packages/99/9f/0291a1d01755fe27db3841aadf1e39ce8ae5c03121ac1843790314447fa4/Galaxy-ML-0.8.3.tar.gz#sha256=a40d7b304e9b7e2f31366895986b2091f30530be9a739553d60d69d58f7b00bd to build tracker '/tmp/pip-req-tracker-qlt42gfw' 2021-07-29T09:53:32,107 Running setup.py (path:/tmp/pip-wheel-fzd27w3q/galaxy-ml_b224dc8db22b4051b6e68451cb99fb24/setup.py) egg_info for package galaxy-ml 2021-07-29T09:53:32,107 Created temporary directory: /tmp/pip-pip-egg-info-lbpadifo 2021-07-29T09:53:32,108 Running command python setup.py egg_info 2021-07-29T09:53:36,676 Compiling galaxy_ml/externals/selene_sdk/sequences/_sequence.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd. 2021-07-29T09:53:36,677 Compiling galaxy_ml/externals/selene_sdk/targets/_genomic_features.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd. 2021-07-29T09:53:36,677 [1/2] Cythonizing galaxy_ml/externals/selene_sdk/sequences/_sequence.pyx 2021-07-29T09:53:36,678 [2/2] Cythonizing galaxy_ml/externals/selene_sdk/targets/_genomic_features.pyx 2021-07-29T09:53:36,898 running egg_info 2021-07-29T09:53:36,900 creating /tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info 2021-07-29T09:53:36,901 writing /tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/PKG-INFO 2021-07-29T09:53:36,903 writing dependency_links to /tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/dependency_links.txt 2021-07-29T09:53:36,905 writing requirements to /tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/requires.txt 2021-07-29T09:53:36,906 writing top-level names to /tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/top_level.txt 2021-07-29T09:53:36,907 writing manifest file '/tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/SOURCES.txt' 2021-07-29T09:53:37,069 reading manifest file '/tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/SOURCES.txt' 2021-07-29T09:53:37,071 reading manifest template 'MANIFEST.in' 2021-07-29T09:53:37,076 adding license file 'LICENSE' 2021-07-29T09:53:37,081 writing manifest file '/tmp/pip-pip-egg-info-lbpadifo/Galaxy_ML.egg-info/SOURCES.txt' 2021-07-29T09:53:37,268 Source in /tmp/pip-wheel-fzd27w3q/galaxy-ml_b224dc8db22b4051b6e68451cb99fb24 has version 0.8.3, which satisfies requirement galaxy-ml==0.8.3 from https://files.pythonhosted.org/packages/99/9f/0291a1d01755fe27db3841aadf1e39ce8ae5c03121ac1843790314447fa4/Galaxy-ML-0.8.3.tar.gz#sha256=a40d7b304e9b7e2f31366895986b2091f30530be9a739553d60d69d58f7b00bd 2021-07-29T09:53:37,269 Removed galaxy-ml==0.8.3 from https://files.pythonhosted.org/packages/99/9f/0291a1d01755fe27db3841aadf1e39ce8ae5c03121ac1843790314447fa4/Galaxy-ML-0.8.3.tar.gz#sha256=a40d7b304e9b7e2f31366895986b2091f30530be9a739553d60d69d58f7b00bd from build tracker '/tmp/pip-req-tracker-qlt42gfw' 2021-07-29T09:53:37,273 Created temporary directory: /tmp/pip-unpack-8htbz9yi 2021-07-29T09:53:37,273 Building wheels for collected packages: galaxy-ml 2021-07-29T09:53:37,278 Created temporary directory: /tmp/pip-wheel-0lq502za 2021-07-29T09:53:37,278 Building wheel for galaxy-ml (setup.py): started 2021-07-29T09:53:37,279 Destination directory: /tmp/pip-wheel-0lq502za 2021-07-29T09:53:37,279 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-fzd27w3q/galaxy-ml_b224dc8db22b4051b6e68451cb99fb24/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-fzd27w3q/galaxy-ml_b224dc8db22b4051b6e68451cb99fb24/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-0lq502za 2021-07-29T09:53:39,106 running bdist_wheel 2021-07-29T09:53:39,110 running build 2021-07-29T09:53:39,110 running build_py 2021-07-29T09:53:39,245 creating build 2021-07-29T09:53:39,245 creating build/lib.linux-armv7l-3.9 2021-07-29T09:53:39,246 creating build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,247 copying galaxy_ml/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,248 copying galaxy_ml/utils.py -> build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,251 copying galaxy_ml/iraps_classifier.py -> build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,253 copying galaxy_ml/keras_galaxy_models.py -> build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,256 copying galaxy_ml/feature_selectors.py -> build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,259 creating build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target 2021-07-29T09:53:39,260 copying galaxy_ml/binarize_target/_iraps_classifier.py -> build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target 2021-07-29T09:53:39,263 copying galaxy_ml/binarize_target/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target 2021-07-29T09:53:39,265 copying galaxy_ml/binarize_target/_binarize_estimators.py -> build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target 2021-07-29T09:53:39,267 copying galaxy_ml/binarize_target/_scorers.py -> build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target 2021-07-29T09:53:39,270 creating build/lib.linux-armv7l-3.9/galaxy_ml/metrics 2021-07-29T09:53:39,270 copying galaxy_ml/metrics/_regression.py -> build/lib.linux-armv7l-3.9/galaxy_ml/metrics 2021-07-29T09:53:39,272 copying galaxy_ml/metrics/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/metrics 2021-07-29T09:53:39,275 creating build/lib.linux-armv7l-3.9/galaxy_ml/model_validations 2021-07-29T09:53:39,276 copying galaxy_ml/model_validations/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_validations 2021-07-29T09:53:39,278 copying galaxy_ml/model_validations/_splitter.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_validations 2021-07-29T09:53:39,280 copying galaxy_ml/model_validations/_fit_and_score.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_validations 2021-07-29T09:53:39,282 copying galaxy_ml/model_validations/_train_test_split.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_validations 2021-07-29T09:53:39,286 creating build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,287 copying galaxy_ml/preprocessors/_protein_one_hot_encoder.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,289 copying galaxy_ml/preprocessors/_fasta_dna_batch_generator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,291 copying galaxy_ml/preprocessors/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,293 copying galaxy_ml/preprocessors/_fasta_iterator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,309 copying galaxy_ml/preprocessors/_z_random_over_sampler.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,311 copying galaxy_ml/preprocessors/_genomic_variant_batch_generator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,314 copying galaxy_ml/preprocessors/_fasta_protein_batch_generator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,316 copying galaxy_ml/preprocessors/_image_batch_generator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,320 copying galaxy_ml/preprocessors/_genome_one_hot_encoder.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,323 copying galaxy_ml/preprocessors/_tdm_scaler.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,331 copying galaxy_ml/preprocessors/_fasta_rna_batch_generator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,333 copying galaxy_ml/preprocessors/_genomic_interval_batch_generator.py -> build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors 2021-07-29T09:53:39,337 creating build/lib.linux-armv7l-3.9/galaxy_ml/model_persist 2021-07-29T09:53:39,338 copying galaxy_ml/model_persist/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_persist 2021-07-29T09:53:39,341 copying galaxy_ml/model_persist/_pickle_json.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_persist 2021-07-29T09:53:39,344 copying galaxy_ml/model_persist/_savings.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_persist 2021-07-29T09:53:39,347 copying galaxy_ml/model_persist/_pickle_hdf5.py -> build/lib.linux-armv7l-3.9/galaxy_ml/model_persist 2021-07-29T09:53:39,350 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals 2021-07-29T09:53:39,351 copying galaxy_ml/externals/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals 2021-07-29T09:53:39,354 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk 2021-07-29T09:53:39,355 copying galaxy_ml/externals/selene_sdk/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk 2021-07-29T09:53:39,357 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:39,358 copying galaxy_ml/externals/selene_sdk/targets/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:39,360 copying galaxy_ml/externals/selene_sdk/targets/target.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:39,362 copying galaxy_ml/externals/selene_sdk/targets/genomic_features.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:39,365 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:39,366 copying galaxy_ml/externals/selene_sdk/utils/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:39,368 copying galaxy_ml/externals/selene_sdk/utils/utils.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:39,370 copying galaxy_ml/externals/selene_sdk/utils/performance_metrics.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:39,373 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,374 copying galaxy_ml/externals/selene_sdk/sequences/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,376 copying galaxy_ml/externals/selene_sdk/sequences/sequence.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,378 copying galaxy_ml/externals/selene_sdk/sequences/proteome.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,381 copying galaxy_ml/externals/selene_sdk/sequences/genome.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,384 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:39,384 copying galaxy_ml/externals/selene_sdk/predict/_common.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:39,386 copying galaxy_ml/externals/selene_sdk/predict/__init__.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:39,388 copying galaxy_ml/externals/selene_sdk/predict/_variant_effect_prediction.py -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:39,390 running egg_info 2021-07-29T09:53:39,403 writing Galaxy_ML.egg-info/PKG-INFO 2021-07-29T09:53:39,405 writing dependency_links to Galaxy_ML.egg-info/dependency_links.txt 2021-07-29T09:53:39,407 writing requirements to Galaxy_ML.egg-info/requires.txt 2021-07-29T09:53:39,408 writing top-level names to Galaxy_ML.egg-info/top_level.txt 2021-07-29T09:53:39,420 reading manifest file 'Galaxy_ML.egg-info/SOURCES.txt' 2021-07-29T09:53:39,427 reading manifest template 'MANIFEST.in' 2021-07-29T09:53:39,432 adding license file 'LICENSE' 2021-07-29T09:53:39,437 writing manifest file 'Galaxy_ML.egg-info/SOURCES.txt' 2021-07-29T09:53:39,445 copying galaxy_ml/pk_whitelist.json -> build/lib.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,450 copying galaxy_ml/externals/selene_sdk/targets/_genomic_features.c -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:39,459 copying galaxy_ml/externals/selene_sdk/targets/_genomic_features.pyx -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:39,461 copying galaxy_ml/externals/selene_sdk/sequences/_sequence.c -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,471 copying galaxy_ml/externals/selene_sdk/sequences/_sequence.pyx -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,473 creating build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:39,474 copying galaxy_ml/externals/selene_sdk/sequences/data/hg19_blacklist_ENCFF001TDO.bed.gz -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:39,476 copying galaxy_ml/externals/selene_sdk/sequences/data/hg19_blacklist_ENCFF001TDO.bed.gz.tbi -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:39,479 copying galaxy_ml/externals/selene_sdk/sequences/data/hg38.blacklist.bed.gz -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:39,481 copying galaxy_ml/externals/selene_sdk/sequences/data/hg38.blacklist.bed.gz.tbi -> build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:39,491 running build_ext 2021-07-29T09:53:39,498 building 'galaxy_ml.externals.selene_sdk.sequences._sequence' extension 2021-07-29T09:53:39,499 creating build/temp.linux-armv7l-3.9 2021-07-29T09:53:39,499 creating build/temp.linux-armv7l-3.9/galaxy_ml 2021-07-29T09:53:39,500 creating build/temp.linux-armv7l-3.9/galaxy_ml/externals 2021-07-29T09:53:39,501 creating build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk 2021-07-29T09:53:39,502 creating build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:39,503 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c galaxy_ml/externals/selene_sdk/sequences/_sequence.c -o build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/_sequence.o 2021-07-29T09:53:40,015 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-29T09:53:40,015 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-29T09:53:40,015 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-29T09:53:40,016 from galaxy_ml/externals/selene_sdk/sequences/_sequence.c:642: 2021-07-29T09:53:40,016 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-29T09:53:40,016 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-29T09:53:40,016 | ^~~~~~~ 2021-07-29T09:53:42,206 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/_sequence.o -o build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/_sequence.cpython-39-arm-linux-gnueabihf.so 2021-07-29T09:53:42,394 building 'galaxy_ml.externals.selene_sdk.targets._genomic_features' extension 2021-07-29T09:53:42,395 creating build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:42,398 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c galaxy_ml/externals/selene_sdk/targets/_genomic_features.c -o build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/_genomic_features.o 2021-07-29T09:53:42,870 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-29T09:53:42,870 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-29T09:53:42,870 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-29T09:53:42,870 from galaxy_ml/externals/selene_sdk/targets/_genomic_features.c:642: 2021-07-29T09:53:42,870 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-29T09:53:42,870 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-29T09:53:42,871 | ^~~~~~~ 2021-07-29T09:53:46,247 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/_genomic_features.o -o build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/_genomic_features.cpython-39-arm-linux-gnueabihf.so 2021-07-29T09:53:46,380 installing to build/bdist.linux-armv7l/wheel 2021-07-29T09:53:46,380 running install 2021-07-29T09:53:46,381 running install_lib 2021-07-29T09:53:46,386 creating build/bdist.linux-armv7l 2021-07-29T09:53:46,386 creating build/bdist.linux-armv7l/wheel 2021-07-29T09:53:46,388 creating build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,389 copying build/lib.linux-armv7l-3.9/galaxy_ml/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,392 creating build/bdist.linux-armv7l/wheel/galaxy_ml/binarize_target 2021-07-29T09:53:46,393 copying build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target/_iraps_classifier.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/binarize_target 2021-07-29T09:53:46,396 copying build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/binarize_target 2021-07-29T09:53:46,398 copying build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target/_binarize_estimators.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/binarize_target 2021-07-29T09:53:46,401 copying build/lib.linux-armv7l-3.9/galaxy_ml/binarize_target/_scorers.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/binarize_target 2021-07-29T09:53:46,404 copying build/lib.linux-armv7l-3.9/galaxy_ml/pk_whitelist.json -> build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,408 copying build/lib.linux-armv7l-3.9/galaxy_ml/utils.py -> build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,411 copying build/lib.linux-armv7l-3.9/galaxy_ml/iraps_classifier.py -> build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,414 creating build/bdist.linux-armv7l/wheel/galaxy_ml/metrics 2021-07-29T09:53:46,415 copying build/lib.linux-armv7l-3.9/galaxy_ml/metrics/_regression.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/metrics 2021-07-29T09:53:46,417 copying build/lib.linux-armv7l-3.9/galaxy_ml/metrics/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/metrics 2021-07-29T09:53:46,419 creating build/bdist.linux-armv7l/wheel/galaxy_ml/model_validations 2021-07-29T09:53:46,420 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_validations/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_validations 2021-07-29T09:53:46,423 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_validations/_splitter.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_validations 2021-07-29T09:53:46,425 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_validations/_fit_and_score.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_validations 2021-07-29T09:53:46,428 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_validations/_train_test_split.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_validations 2021-07-29T09:53:46,431 creating build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,432 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_protein_one_hot_encoder.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,434 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_fasta_dna_batch_generator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,436 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,438 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_fasta_iterator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,441 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_z_random_over_sampler.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,443 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_genomic_variant_batch_generator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,445 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_fasta_protein_batch_generator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,447 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_image_batch_generator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,451 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_genome_one_hot_encoder.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,455 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_tdm_scaler.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,457 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_fasta_rna_batch_generator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,460 copying build/lib.linux-armv7l-3.9/galaxy_ml/preprocessors/_genomic_interval_batch_generator.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/preprocessors 2021-07-29T09:53:46,464 copying build/lib.linux-armv7l-3.9/galaxy_ml/keras_galaxy_models.py -> build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,470 creating build/bdist.linux-armv7l/wheel/galaxy_ml/model_persist 2021-07-29T09:53:46,471 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_persist/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_persist 2021-07-29T09:53:46,475 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_persist/_pickle_json.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_persist 2021-07-29T09:53:46,478 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_persist/_savings.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_persist 2021-07-29T09:53:46,482 copying build/lib.linux-armv7l-3.9/galaxy_ml/model_persist/_pickle_hdf5.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/model_persist 2021-07-29T09:53:46,486 copying build/lib.linux-armv7l-3.9/galaxy_ml/feature_selectors.py -> build/bdist.linux-armv7l/wheel/galaxy_ml 2021-07-29T09:53:46,491 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals 2021-07-29T09:53:46,492 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals 2021-07-29T09:53:46,496 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk 2021-07-29T09:53:46,497 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk 2021-07-29T09:53:46,500 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,502 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,505 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/target.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,507 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/_genomic_features.pyx -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,510 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/genomic_features.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,514 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/_genomic_features.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,523 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/targets/_genomic_features.c -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/targets 2021-07-29T09:53:46,535 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:46,537 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:46,539 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils/utils.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:46,542 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/utils/performance_metrics.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/utils 2021-07-29T09:53:46,546 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,547 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/_sequence.c -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,557 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,559 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/sequence.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,562 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/proteome.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,566 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:46,567 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data/hg38.blacklist.bed.gz.tbi -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:46,570 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data/hg19_blacklist_ENCFF001TDO.bed.gz -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:46,573 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data/hg38.blacklist.bed.gz -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:46,576 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/data/hg19_blacklist_ENCFF001TDO.bed.gz.tbi -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences/data 2021-07-29T09:53:46,579 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/genome.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,583 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/_sequence.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,590 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/sequences/_sequence.pyx -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/sequences 2021-07-29T09:53:46,594 creating build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:46,595 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict/_common.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:46,598 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:46,600 copying build/lib.linux-armv7l-3.9/galaxy_ml/externals/selene_sdk/predict/_variant_effect_prediction.py -> build/bdist.linux-armv7l/wheel/galaxy_ml/externals/selene_sdk/predict 2021-07-29T09:53:46,604 running install_egg_info 2021-07-29T09:53:46,615 Copying Galaxy_ML.egg-info to build/bdist.linux-armv7l/wheel/Galaxy_ML-0.8.3-py3.9.egg-info 2021-07-29T09:53:46,628 running install_scripts 2021-07-29T09:53:46,708 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-29T09:53:46,714 creating build/bdist.linux-armv7l/wheel/Galaxy_ML-0.8.3.dist-info/WHEEL 2021-07-29T09:53:46,718 creating '/tmp/pip-wheel-0lq502za/Galaxy_ML-0.8.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-29T09:53:46,723 adding 'galaxy_ml/__init__.py' 2021-07-29T09:53:46,726 adding 'galaxy_ml/feature_selectors.py' 2021-07-29T09:53:46,728 adding 'galaxy_ml/iraps_classifier.py' 2021-07-29T09:53:46,736 adding 'galaxy_ml/keras_galaxy_models.py' 2021-07-29T09:53:46,745 adding 'galaxy_ml/pk_whitelist.json' 2021-07-29T09:53:46,750 adding 'galaxy_ml/utils.py' 2021-07-29T09:53:46,753 adding 'galaxy_ml/binarize_target/__init__.py' 2021-07-29T09:53:46,756 adding 'galaxy_ml/binarize_target/_binarize_estimators.py' 2021-07-29T09:53:46,758 adding 'galaxy_ml/binarize_target/_iraps_classifier.py' 2021-07-29T09:53:46,760 adding 'galaxy_ml/binarize_target/_scorers.py' 2021-07-29T09:53:46,763 adding 'galaxy_ml/externals/__init__.py' 2021-07-29T09:53:46,765 adding 'galaxy_ml/externals/selene_sdk/__init__.py' 2021-07-29T09:53:46,767 adding 'galaxy_ml/externals/selene_sdk/predict/__init__.py' 2021-07-29T09:53:46,769 adding 'galaxy_ml/externals/selene_sdk/predict/_common.py' 2021-07-29T09:53:46,771 adding 'galaxy_ml/externals/selene_sdk/predict/_variant_effect_prediction.py' 2021-07-29T09:53:46,773 adding 'galaxy_ml/externals/selene_sdk/sequences/__init__.py' 2021-07-29T09:53:46,799 adding 'galaxy_ml/externals/selene_sdk/sequences/_sequence.c' 2021-07-29T09:53:46,831 adding 'galaxy_ml/externals/selene_sdk/sequences/_sequence.cpython-39-arm-linux-gnueabihf.so' 2021-07-29T09:53:46,834 adding 'galaxy_ml/externals/selene_sdk/sequences/_sequence.pyx' 2021-07-29T09:53:46,836 adding 'galaxy_ml/externals/selene_sdk/sequences/genome.py' 2021-07-29T09:53:46,838 adding 'galaxy_ml/externals/selene_sdk/sequences/proteome.py' 2021-07-29T09:53:46,840 adding 'galaxy_ml/externals/selene_sdk/sequences/sequence.py' 2021-07-29T09:53:46,843 adding 'galaxy_ml/externals/selene_sdk/sequences/data/hg19_blacklist_ENCFF001TDO.bed.gz' 2021-07-29T09:53:46,845 adding 'galaxy_ml/externals/selene_sdk/sequences/data/hg19_blacklist_ENCFF001TDO.bed.gz.tbi' 2021-07-29T09:53:46,847 adding 'galaxy_ml/externals/selene_sdk/sequences/data/hg38.blacklist.bed.gz' 2021-07-29T09:53:46,848 adding 'galaxy_ml/externals/selene_sdk/sequences/data/hg38.blacklist.bed.gz.tbi' 2021-07-29T09:53:46,850 adding 'galaxy_ml/externals/selene_sdk/targets/__init__.py' 2021-07-29T09:53:46,876 adding 'galaxy_ml/externals/selene_sdk/targets/_genomic_features.c' 2021-07-29T09:53:46,926 adding 'galaxy_ml/externals/selene_sdk/targets/_genomic_features.cpython-39-arm-linux-gnueabihf.so' 2021-07-29T09:53:46,930 adding 'galaxy_ml/externals/selene_sdk/targets/_genomic_features.pyx' 2021-07-29T09:53:46,932 adding 'galaxy_ml/externals/selene_sdk/targets/genomic_features.py' 2021-07-29T09:53:46,934 adding 'galaxy_ml/externals/selene_sdk/targets/target.py' 2021-07-29T09:53:46,936 adding 'galaxy_ml/externals/selene_sdk/utils/__init__.py' 2021-07-29T09:53:46,938 adding 'galaxy_ml/externals/selene_sdk/utils/performance_metrics.py' 2021-07-29T09:53:46,940 adding 'galaxy_ml/externals/selene_sdk/utils/utils.py' 2021-07-29T09:53:46,942 adding 'galaxy_ml/metrics/__init__.py' 2021-07-29T09:53:46,943 adding 'galaxy_ml/metrics/_regression.py' 2021-07-29T09:53:46,945 adding 'galaxy_ml/model_persist/__init__.py' 2021-07-29T09:53:46,948 adding 'galaxy_ml/model_persist/_pickle_hdf5.py' 2021-07-29T09:53:46,950 adding 'galaxy_ml/model_persist/_pickle_json.py' 2021-07-29T09:53:46,953 adding 'galaxy_ml/model_persist/_savings.py' 2021-07-29T09:53:46,955 adding 'galaxy_ml/model_validations/__init__.py' 2021-07-29T09:53:46,957 adding 'galaxy_ml/model_validations/_fit_and_score.py' 2021-07-29T09:53:46,959 adding 'galaxy_ml/model_validations/_splitter.py' 2021-07-29T09:53:46,961 adding 'galaxy_ml/model_validations/_train_test_split.py' 2021-07-29T09:53:46,964 adding 'galaxy_ml/preprocessors/__init__.py' 2021-07-29T09:53:46,966 adding 'galaxy_ml/preprocessors/_fasta_dna_batch_generator.py' 2021-07-29T09:53:46,968 adding 'galaxy_ml/preprocessors/_fasta_iterator.py' 2021-07-29T09:53:46,970 adding 'galaxy_ml/preprocessors/_fasta_protein_batch_generator.py' 2021-07-29T09:53:46,971 adding 'galaxy_ml/preprocessors/_fasta_rna_batch_generator.py' 2021-07-29T09:53:46,973 adding 'galaxy_ml/preprocessors/_genome_one_hot_encoder.py' 2021-07-29T09:53:46,977 adding 'galaxy_ml/preprocessors/_genomic_interval_batch_generator.py' 2021-07-29T09:53:46,979 adding 'galaxy_ml/preprocessors/_genomic_variant_batch_generator.py' 2021-07-29T09:53:46,984 adding 'galaxy_ml/preprocessors/_image_batch_generator.py' 2021-07-29T09:53:46,986 adding 'galaxy_ml/preprocessors/_protein_one_hot_encoder.py' 2021-07-29T09:53:46,988 adding 'galaxy_ml/preprocessors/_tdm_scaler.py' 2021-07-29T09:53:46,990 adding 'galaxy_ml/preprocessors/_z_random_over_sampler.py' 2021-07-29T09:53:46,991 adding 'Galaxy_ML-0.8.3.dist-info/LICENSE' 2021-07-29T09:53:46,993 adding 'Galaxy_ML-0.8.3.dist-info/METADATA' 2021-07-29T09:53:46,994 adding 'Galaxy_ML-0.8.3.dist-info/WHEEL' 2021-07-29T09:53:46,996 adding 'Galaxy_ML-0.8.3.dist-info/top_level.txt' 2021-07-29T09:53:46,998 adding 'Galaxy_ML-0.8.3.dist-info/RECORD' 2021-07-29T09:53:47,006 removing build/bdist.linux-armv7l/wheel 2021-07-29T09:53:47,176 Building wheel for galaxy-ml (setup.py): finished with status 'done' 2021-07-29T09:53:47,183 Created wheel for galaxy-ml: filename=Galaxy_ML-0.8.3-cp39-cp39-linux_armv7l.whl size=366270 sha256=1940698de943f84fa0705352c4b1460eb8d0f38479c33258580e836a1d0a4c5b 2021-07-29T09:53:47,183 Stored in directory: /tmp/pip-ephem-wheel-cache-fzvhfded/wheels/b4/3f/07/714d78576c6ae581c23a82dd4dea85d761355b91f4fd5923e1 2021-07-29T09:53:47,195 Successfully built galaxy-ml 2021-07-29T09:53:47,212 Removed build tracker: '/tmp/pip-req-tracker-qlt42gfw'