2021-07-29T15:04:39,298 Created temporary directory: /tmp/pip-ephem-wheel-cache-0v8_9jfu
2021-07-29T15:04:39,301 Created temporary directory: /tmp/pip-req-tracker-360326tm
2021-07-29T15:04:39,302 Initialized build tracking at /tmp/pip-req-tracker-360326tm
2021-07-29T15:04:39,302 Created build tracker: /tmp/pip-req-tracker-360326tm
2021-07-29T15:04:39,302 Entered build tracker: /tmp/pip-req-tracker-360326tm
2021-07-29T15:04:39,303 Created temporary directory: /tmp/pip-wheel-1u46m6dv
2021-07-29T15:04:39,333 WARNING: The index url "/" seems invalid, please provide a scheme.
2021-07-29T15:04:39,334 WARNING: The index url "t" seems invalid, please provide a scheme.
2021-07-29T15:04:39,334 WARNING: The index url "m" seems invalid, please provide a scheme.
2021-07-29T15:04:39,334 WARNING: The index url "p" seems invalid, please provide a scheme.
2021-07-29T15:04:39,334 Looking in indexes: https://pypi.org/simple, /, t, m, p
2021-07-29T15:04:39,337 WARNING: Location '/pept/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T15:04:39,338 WARNING: Location 't/pept/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T15:04:39,338 WARNING: Location 'm/pept/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T15:04:39,338 WARNING: Location 'p/pept/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-29T15:04:39,338 1 location(s) to search for versions of pept:
2021-07-29T15:04:39,338 * https://pypi.org/simple/pept/
2021-07-29T15:04:39,339 Fetching project page and analyzing links: https://pypi.org/simple/pept/
2021-07-29T15:04:39,339 Getting page https://pypi.org/simple/pept/
2021-07-29T15:04:39,341 Found index url https://pypi.org/simple
2021-07-29T15:04:39,589   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/aa/df/f98ccf456cd9642fad70b37901963fa0fe7aa2791657d936439a095308b0/pept-0.1.2-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=dd915cb1e425e2365941ca3d5111f59263ac671554314ffb6a9e2277eb5bf186 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,590   Found link https://files.pythonhosted.org/packages/da/54/c2047f26d3c5a6e84dc7394eca8c7b35a99b0d46203bc21fc487dbee9a29/pept-0.1.2.tar.gz#sha256=b29b833dee143327f2f9dac64dda7c61533e82cce5ed1f527e01538e9712e7d6 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.1.2
2021-07-29T15:04:39,590   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/f0/f1/a1e1451f5ad81580c8b0cc84103586409d439814e87ed3f2c6fa29e44d09/pept-0.1.3-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=360fcfd800473a28a9d6bfbdf80cce9c81c0dfac6284471c9fd90cd280d14a8d (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,590   Found link https://files.pythonhosted.org/packages/6e/e2/579869c42fc7adfbc21ea5ffb3529a42b9a9e911ddd75b47da122b291ce7/pept-0.1.3.tar.gz#sha256=08f63a0c2d3559c27468f053c649b7d27f5297e7496795b352d27038a3e5818f (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.1.3
2021-07-29T15:04:39,591   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/97/bf/915014383766385362c03448abf04b9d2c5860075a4b4d27aee40a559f34/pept-0.1.5-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=fe78bc669d0fb0eacdd63cdbeec90e7bb599dd0f5725c965a783f263c6d3fd6d (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,591   Found link https://files.pythonhosted.org/packages/88/3d/24f04ba7b656874ca7cd26ff38346fd5793ee7aaabdbec2433a42139357e/pept-0.1.5.tar.gz#sha256=3d5931886be83eaf812607b5a0d7e7788c00a8ef5599eb45ec61ccae48ca6b77 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.1.5
2021-07-29T15:04:39,592   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/cc/e8/5c66c5c7ee09632ba7e54505a17e819ab1f213827897f911eb82be743b2c/pept-0.1.6-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=8d987c151a3870f4d81689f2219d774b95100db4e1927fcf9007d2f3ef90a17b (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,592   Found link https://files.pythonhosted.org/packages/82/86/6bbfccb128dfadb016ee4cc0d9c6bb68a8be2036f3eb3db8a078de3f0341/pept-0.1.6.tar.gz#sha256=f4dcaea3aa4cb7dbeda4d7e1c57531af475395f72f7dcddced2e65016d79f009 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.1.6
2021-07-29T15:04:39,592   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/af/b9/5991ac1cb7c6b0f67ba2dc29821fe6a91daaaf30aaebe8526600028f2deb/pept-0.2.0-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=ab5a2f21c3f25ef69193143e7893ac768ce3a4318aa854e456cd7f5e39ed3c72 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,593   Found link https://files.pythonhosted.org/packages/a8/ca/39393a5f6af9d8c1f0f45881da0c4e5b7a2af3a4b86d44c171d182f213b0/pept-0.2.0.tar.gz#sha256=951160db6902ab6d73d8d921acea1ca3e235ce955351cb3890ca2cd990bcdaaa (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.2.0
2021-07-29T15:04:39,593   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/ca/85/8050bcfeae2f33649cac8a5389788d7850d0fe8e0aa59d527f64ed2ba305/pept-0.2.1-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=1327b7b9a9a984f01d5a72b18c38a225ef7261773883176ed82d5b9d99e05550 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,594   Found link https://files.pythonhosted.org/packages/72/6f/8eba02c27174be04b9586ad530b1752fddb84db9d021c206d1838e55a497/pept-0.2.1.tar.gz#sha256=b044cc5b071d210816f9f7282b8330c17b3a624ff2bbc708b011ac06124663d3 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.2.1
2021-07-29T15:04:39,594   Skipping link: No binaries permitted for pept: https://files.pythonhosted.org/packages/22/dc/89c7898c1f8af0ae3bd173cc95e2f04ccec51b6da71f2c8b2d563859929e/pept-0.2.2-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=e8965ef954b3d439730b6e5da1aa5cd92dd3e56a415e7ff3ae282de4e957c7a9 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0)
2021-07-29T15:04:39,595   Found link https://files.pythonhosted.org/packages/d0/3d/95a7526444a622876c8bd468a88c77469812d1afa7a00641fee042eef8fa/pept-0.2.2.tar.gz#sha256=03efcab9245f1917e49db45d5d87e172e8dc219df0b02b4da0fb23f10cdf0cf9 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.2.2
2021-07-29T15:04:39,595   Found link https://files.pythonhosted.org/packages/8a/af/d1b2f826c6139578a9b5c5dea4334bf8189b5eeec7f4c8d0daf176c3d8b3/pept-0.2.3.tar.gz#sha256=3dd09671990e32e87552dbd49e08cee83d8dce0129072ab31fd785ef7e56cf25 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.2.3
2021-07-29T15:04:39,596   Found link https://files.pythonhosted.org/packages/6f/2e/d5f01ed568e1b84bd17a8cb32d47cc105eb49e1fa4f6cb2cc6f8725e47f4/pept-0.2.4.tar.gz#sha256=3ec006d7aa2cf8beedd8f371c3938c2c242519be25e8d7344f0aef06c91daa3c (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.2.4
2021-07-29T15:04:39,596   Found link https://files.pythonhosted.org/packages/0d/cc/7306b43f572f1cafe8e19cfd70e0dc2d08fe97425957463a382103547caa/pept-0.3.0.tar.gz#sha256=31a7c2893010f3b467d76e4ea4cf11d897705b3b4757fafd398ffbe306e785d1 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.3.0
2021-07-29T15:04:39,597   Found link https://files.pythonhosted.org/packages/6a/f4/8c1e3834f527f9a69efd675a05cb13630e55c5d469dbaaae58e70d704311/pept-0.3.1.tar.gz#sha256=c955d2a271e503c7d94d2fad121024952aafd78f4d36344ccbcf5c122d098ee5 (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.3.1
2021-07-29T15:04:39,597   Found link https://files.pythonhosted.org/packages/50/54/fd7f5f06a670e9851a28178293ef5998eced71a2b71d6827df3bd81ed910/pept-0.3.2.tar.gz#sha256=87d69f4f82cf67c0afa8f3900799fd8c834c5bb0a315c7d021861971c02cedce (from https://pypi.org/simple/pept/) (requires-python:>=3.6.0), version: 0.3.2
2021-07-29T15:04:39,598 Skipping link: not a file: https://pypi.org/simple/pept/
2021-07-29T15:04:39,617 Given no hashes to check 1 links for project 'pept': discarding no candidates
2021-07-29T15:04:39,635 Collecting pept==0.3.0
2021-07-29T15:04:39,636   Created temporary directory: /tmp/pip-unpack-roikvq_z
2021-07-29T15:04:40,121   Downloading pept-0.3.0.tar.gz (1.3 MB)
2021-07-29T15:04:41,111   Added pept==0.3.0 from https://files.pythonhosted.org/packages/0d/cc/7306b43f572f1cafe8e19cfd70e0dc2d08fe97425957463a382103547caa/pept-0.3.0.tar.gz#sha256=31a7c2893010f3b467d76e4ea4cf11d897705b3b4757fafd398ffbe306e785d1 to build tracker '/tmp/pip-req-tracker-360326tm'
2021-07-29T15:04:41,112     Running setup.py (path:/tmp/pip-wheel-1u46m6dv/pept_1d8d2e73935a4e8ab110c4d7d8adeeb1/setup.py) egg_info for package pept
2021-07-29T15:04:41,113     Created temporary directory: /tmp/pip-pip-egg-info-05bgpbmh
2021-07-29T15:04:41,114     Running command python setup.py egg_info
2021-07-29T15:05:32,011     Compiling pept/scanners/parallel_screens/extensions/binary_converter.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-29T15:05:32,012     Compiling pept/utilities/cutpoints/find_minpoints.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-29T15:05:32,013     Compiling pept/processing/circles_ext.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/math.pxd.
2021-07-29T15:05:32,013     Compiling pept/processing/occupancy_ext.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/stdint.pxd.
2021-07-29T15:05:32,013     Compiling pept/utilities/traverse/traverse3d.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/float.pxd.
2021-07-29T15:05:32,013     Compiling pept/utilities/traverse/traverse2d.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/float.pxd.
2021-07-29T15:05:32,014     Compiling pept/tracking/trajectory_separation/distance_matrix_reachable.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-29T15:05:32,014     Compiling pept/tracking/birmingham_method/extensions/birmingham_method.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-29T15:05:32,014     Compiling pept/tracking/fpi/fpi_ext.pyx because it depends on /usr/local/lib/python3.9/dist-packages/Cython/Includes/libc/string.pxd.
2021-07-29T15:05:32,014     [1/9] Cythonizing pept/processing/circles_ext.pyx
2021-07-29T15:05:32,014     [2/9] Cythonizing pept/processing/occupancy_ext.pyx
2021-07-29T15:05:32,015     [3/9] Cythonizing pept/utilities/traverse/traverse2d.pyx
2021-07-29T15:05:32,015     [4/9] Cythonizing pept/utilities/traverse/traverse3d.pyx
2021-07-29T15:05:32,015     [5/9] Cythonizing pept/scanners/parallel_screens/extensions/binary_converter.pyx
2021-07-29T15:05:32,015     [6/9] Cythonizing pept/tracking/birmingham_method/extensions/birmingham_method.pyx
2021-07-29T15:05:32,015     [7/9] Cythonizing pept/tracking/fpi/fpi_ext.pyx
2021-07-29T15:05:32,015     [8/9] Cythonizing pept/tracking/trajectory_separation/distance_matrix_reachable.pyx
2021-07-29T15:05:32,016     [9/9] Cythonizing pept/utilities/cutpoints/find_minpoints.pyx
2021-07-29T15:05:32,070     /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-29T15:05:32,070       warnings.warn(
2021-07-29T15:05:32,243     running egg_info
2021-07-29T15:05:32,245     creating /tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info
2021-07-29T15:05:32,246     writing /tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/PKG-INFO
2021-07-29T15:05:32,249     writing dependency_links to /tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/dependency_links.txt
2021-07-29T15:05:32,251     writing requirements to /tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/requires.txt
2021-07-29T15:05:32,252     writing top-level names to /tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/top_level.txt
2021-07-29T15:05:32,253     writing manifest file '/tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/SOURCES.txt'
2021-07-29T15:05:32,412     reading manifest file '/tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/SOURCES.txt'
2021-07-29T15:05:32,414     reading manifest template 'MANIFEST.in'
2021-07-29T15:05:32,416     warning: no files found matching '*.rst'
2021-07-29T15:05:32,563     warning: no files found matching '*.pxd' under directory 'pept'
2021-07-29T15:05:32,675     warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2021-07-29T15:05:32,676     warning: no previously-included files matching '__pycache__' found anywhere in distribution
2021-07-29T15:05:32,677     warning: no previously-included files matching '*.pyc' found anywhere in distribution
2021-07-29T15:05:32,678     warning: no previously-included files matching '*.so' found anywhere in distribution
2021-07-29T15:05:32,678     adding license file 'LICENSE'
2021-07-29T15:05:32,686     writing manifest file '/tmp/pip-pip-egg-info-05bgpbmh/pept.egg-info/SOURCES.txt'
2021-07-29T15:05:33,025   Source in /tmp/pip-wheel-1u46m6dv/pept_1d8d2e73935a4e8ab110c4d7d8adeeb1 has version 0.3.0, which satisfies requirement pept==0.3.0 from https://files.pythonhosted.org/packages/0d/cc/7306b43f572f1cafe8e19cfd70e0dc2d08fe97425957463a382103547caa/pept-0.3.0.tar.gz#sha256=31a7c2893010f3b467d76e4ea4cf11d897705b3b4757fafd398ffbe306e785d1
2021-07-29T15:05:33,026   Removed pept==0.3.0 from https://files.pythonhosted.org/packages/0d/cc/7306b43f572f1cafe8e19cfd70e0dc2d08fe97425957463a382103547caa/pept-0.3.0.tar.gz#sha256=31a7c2893010f3b467d76e4ea4cf11d897705b3b4757fafd398ffbe306e785d1 from build tracker '/tmp/pip-req-tracker-360326tm'
2021-07-29T15:05:33,033 Created temporary directory: /tmp/pip-unpack-wziofci0
2021-07-29T15:05:33,034 Building wheels for collected packages: pept
2021-07-29T15:05:33,047   Created temporary directory: /tmp/pip-wheel-ul2s0rb9
2021-07-29T15:05:33,048   Building wheel for pept (setup.py): started
2021-07-29T15:05:33,048   Destination directory: /tmp/pip-wheel-ul2s0rb9
2021-07-29T15:05:33,048   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-1u46m6dv/pept_1d8d2e73935a4e8ab110c4d7d8adeeb1/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-1u46m6dv/pept_1d8d2e73935a4e8ab110c4d7d8adeeb1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ul2s0rb9
2021-07-29T15:05:34,909   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:697: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-07-29T15:05:34,910     warnings.warn(
2021-07-29T15:05:35,120   running bdist_wheel
2021-07-29T15:05:35,124   running build
2021-07-29T15:05:35,124   running build_py
2021-07-29T15:05:35,258   creating build
2021-07-29T15:05:35,259   creating build/lib.linux-armv7l-3.9
2021-07-29T15:05:35,259   creating build/lib.linux-armv7l-3.9/pept
2021-07-29T15:05:35,260   copying pept/__init__.py -> build/lib.linux-armv7l-3.9/pept
2021-07-29T15:05:35,263   copying pept/__version__.py -> build/lib.linux-armv7l-3.9/pept
2021-07-29T15:05:35,266   creating build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,266   copying pept/base/__init__.py -> build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,268   copying pept/base/voxel_data.py -> build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,272   copying pept/base/point_data.py -> build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,274   copying pept/base/pixel_data.py -> build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,278   copying pept/base/iterable_samples.py -> build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,280   copying pept/base/line_data.py -> build/lib.linux-armv7l-3.9/pept/base
2021-07-29T15:05:35,283   creating build/lib.linux-armv7l-3.9/pept/cookbook
2021-07-29T15:05:35,284   copying pept/cookbook/__init__.py -> build/lib.linux-armv7l-3.9/pept/cookbook
2021-07-29T15:05:35,286   copying pept/cookbook/peptml.py -> build/lib.linux-armv7l-3.9/pept/cookbook
2021-07-29T15:05:35,291   creating build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,291   copying pept/processing/__init__.py -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,294   copying pept/processing/occupancy.py -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,297   creating build/lib.linux-armv7l-3.9/pept/tracking
2021-07-29T15:05:35,298   copying pept/tracking/__init__.py -> build/lib.linux-armv7l-3.9/pept/tracking
2021-07-29T15:05:35,300   creating build/lib.linux-armv7l-3.9/pept/scanners
2021-07-29T15:05:35,301   copying pept/scanners/__init__.py -> build/lib.linux-armv7l-3.9/pept/scanners
2021-07-29T15:05:35,304   creating build/lib.linux-armv7l-3.9/pept/utilities
2021-07-29T15:05:35,305   copying pept/utilities/__init__.py -> build/lib.linux-armv7l-3.9/pept/utilities
2021-07-29T15:05:35,308   creating build/lib.linux-armv7l-3.9/pept/simulation
2021-07-29T15:05:35,309   copying pept/simulation/__init__.py -> build/lib.linux-armv7l-3.9/pept/simulation
2021-07-29T15:05:35,311   copying pept/simulation/peptsim.py -> build/lib.linux-armv7l-3.9/pept/simulation
2021-07-29T15:05:35,314   creating build/lib.linux-armv7l-3.9/pept/visualisation
2021-07-29T15:05:35,315   copying pept/visualisation/plotly_grapher.py -> build/lib.linux-armv7l-3.9/pept/visualisation
2021-07-29T15:05:35,319   copying pept/visualisation/__init__.py -> build/lib.linux-armv7l-3.9/pept/visualisation
2021-07-29T15:05:35,321   copying pept/visualisation/plotly_grapher2d.py -> build/lib.linux-armv7l-3.9/pept/visualisation
2021-07-29T15:05:35,325   creating build/lib.linux-armv7l-3.9/pept/diagnostics
2021-07-29T15:05:35,326   copying pept/diagnostics/__init__.py -> build/lib.linux-armv7l-3.9/pept/diagnostics
2021-07-29T15:05:35,329   creating build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method
2021-07-29T15:05:35,330   copying pept/tracking/birmingham_method/__init__.py -> build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method
2021-07-29T15:05:35,332   copying pept/tracking/birmingham_method/birmingham_method.py -> build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method
2021-07-29T15:05:35,336   creating build/lib.linux-armv7l-3.9/pept/tracking/peptml
2021-07-29T15:05:35,336   copying pept/tracking/peptml/__init__.py -> build/lib.linux-armv7l-3.9/pept/tracking/peptml
2021-07-29T15:05:35,339   copying pept/tracking/peptml/cutpoints.py -> build/lib.linux-armv7l-3.9/pept/tracking/peptml
2021-07-29T15:05:35,342   copying pept/tracking/peptml/peptml.py -> build/lib.linux-armv7l-3.9/pept/tracking/peptml
2021-07-29T15:05:35,346   copying pept/tracking/peptml/minpoints.py -> build/lib.linux-armv7l-3.9/pept/tracking/peptml
2021-07-29T15:05:35,350   creating build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,351   copying pept/tracking/fpi/__init__.py -> build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,353   copying pept/tracking/fpi/fpi.py -> build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,356   creating build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:05:35,357   copying pept/tracking/trajectory_separation/__init__.py -> build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:05:35,359   copying pept/tracking/trajectory_separation/trajectory_separation.py -> build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:05:35,363   copying pept/tracking/trajectory_separation/tco.py -> build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:05:35,366   creating build/lib.linux-armv7l-3.9/pept/scanners/modular_camera
2021-07-29T15:05:35,367   copying pept/scanners/modular_camera/__init__.py -> build/lib.linux-armv7l-3.9/pept/scanners/modular_camera
2021-07-29T15:05:35,369   copying pept/scanners/modular_camera/modular_camera.py -> build/lib.linux-armv7l-3.9/pept/scanners/modular_camera
2021-07-29T15:05:35,372   creating build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens
2021-07-29T15:05:35,373   copying pept/scanners/parallel_screens/__init__.py -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens
2021-07-29T15:05:35,375   copying pept/scanners/parallel_screens/parallel_screens.py -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens
2021-07-29T15:05:35,378   copying pept/scanners/parallel_screens/adac_forte.py -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens
2021-07-29T15:05:35,381   creating build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:35,382   copying pept/scanners/parallel_screens/extensions/__init__.py -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:35,385   creating build/lib.linux-armv7l-3.9/pept/utilities/parallel
2021-07-29T15:05:35,387   copying pept/utilities/parallel/__init__.py -> build/lib.linux-armv7l-3.9/pept/utilities/parallel
2021-07-29T15:05:35,389   copying pept/utilities/parallel/parallel_map.py -> build/lib.linux-armv7l-3.9/pept/utilities/parallel
2021-07-29T15:05:35,392   creating build/lib.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:05:35,393   copying pept/utilities/traverse/__init__.py -> build/lib.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:05:35,396   creating build/lib.linux-armv7l-3.9/pept/utilities/misc
2021-07-29T15:05:35,397   copying pept/utilities/misc/__init__.py -> build/lib.linux-armv7l-3.9/pept/utilities/misc
2021-07-29T15:05:35,399   copying pept/utilities/misc/aggregate.py -> build/lib.linux-armv7l-3.9/pept/utilities/misc
2021-07-29T15:05:35,401   copying pept/utilities/misc/read_csv.py -> build/lib.linux-armv7l-3.9/pept/utilities/misc
2021-07-29T15:05:35,405   creating build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:35,406   copying pept/utilities/cutpoints/__init__.py -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:35,408   running egg_info
2021-07-29T15:05:35,422   writing pept.egg-info/PKG-INFO
2021-07-29T15:05:35,426   writing dependency_links to pept.egg-info/dependency_links.txt
2021-07-29T15:05:35,428   writing requirements to pept.egg-info/requires.txt
2021-07-29T15:05:35,429   writing top-level names to pept.egg-info/top_level.txt
2021-07-29T15:05:35,467   reading manifest file 'pept.egg-info/SOURCES.txt'
2021-07-29T15:05:35,474   reading manifest template 'MANIFEST.in'
2021-07-29T15:05:35,476   warning: no files found matching '*.rst'
2021-07-29T15:05:35,636   warning: no files found matching '*.pxd' under directory 'pept'
2021-07-29T15:05:35,734   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2021-07-29T15:05:35,735   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2021-07-29T15:05:35,736   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2021-07-29T15:05:35,738   warning: no previously-included files matching '*.so' found anywhere in distribution
2021-07-29T15:05:35,738   adding license file 'LICENSE'
2021-07-29T15:05:35,746   writing manifest file 'pept.egg-info/SOURCES.txt'
2021-07-29T15:05:35,753   creating build/lib.linux-armv7l-3.9/pept/tests
2021-07-29T15:05:35,753   creating build/lib.linux-armv7l-3.9/pept/tests/unit
2021-07-29T15:05:35,755   copying pept/tests/unit/test_base_classes.py -> build/lib.linux-armv7l-3.9/pept/tests/unit
2021-07-29T15:05:35,757   copying pept/processing/circles_ext.c -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,789   copying pept/processing/circles_ext.pyx -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,792   copying pept/processing/occupancy_ext.c -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,815   copying pept/processing/occupancy_ext.pyx -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,818   copying pept/processing/r2d.h -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,822   copying pept/processing/rtd2d.c -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,826   copying pept/processing/rtd2d.h -> build/lib.linux-armv7l-3.9/pept/processing
2021-07-29T15:05:35,828   creating build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions
2021-07-29T15:05:35,829   copying pept/tracking/birmingham_method/extensions/birmingham_method.c -> build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions
2021-07-29T15:05:35,855   copying pept/tracking/birmingham_method/extensions/birmingham_method.pyx -> build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions
2021-07-29T15:05:35,858   copying pept/tracking/birmingham_method/extensions/birmingham_method_ext.c -> build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions
2021-07-29T15:05:35,861   copying pept/tracking/birmingham_method/extensions/birmingham_method_ext.h -> build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions
2021-07-29T15:05:35,863   copying pept/tracking/fpi/PeptStructures.hpp -> build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,867   copying pept/tracking/fpi/calcPosFPI.hpp -> build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,870   copying pept/tracking/fpi/fpi_ext.cpp -> build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,893   copying pept/tracking/fpi/fpi_ext.pyx -> build/lib.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:05:35,896   copying pept/tracking/trajectory_separation/distance_matrix_reachable.c -> build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:05:35,926   copying pept/tracking/trajectory_separation/distance_matrix_reachable.pyx -> build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:05:35,929   creating build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions
2021-07-29T15:05:35,929   copying pept/scanners/modular_camera/extensions/get_pept_event.c -> build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions
2021-07-29T15:05:35,952   copying pept/scanners/modular_camera/extensions/get_pept_event.pyx -> build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions
2021-07-29T15:05:35,954   copying pept/scanners/modular_camera/extensions/get_pept_event_ext.c -> build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions
2021-07-29T15:05:35,957   copying pept/scanners/modular_camera/extensions/get_pept_event_ext.h -> build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions
2021-07-29T15:05:35,959   copying pept/scanners/parallel_screens/extensions/binary_converter.c -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:35,968   copying pept/scanners/parallel_screens/extensions/binary_converter.pyx -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:35,971   copying pept/scanners/parallel_screens/extensions/binary_converter_ext.c -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:35,974   copying pept/scanners/parallel_screens/extensions/binary_converter_ext.h -> build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:35,976   copying pept/utilities/traverse/traverse2d.c -> build/lib.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:05:35,998   copying pept/utilities/traverse/traverse2d.pyx -> build/lib.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:05:36,001   copying pept/utilities/traverse/traverse3d.c -> build/lib.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:05:36,030   copying pept/utilities/traverse/traverse3d.pyx -> build/lib.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:05:36,035   copying pept/utilities/cutpoints/find_cutpoints.c -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:36,057   copying pept/utilities/cutpoints/find_cutpoints.pyx -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:36,061   copying pept/utilities/cutpoints/find_minpoints.c -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:36,086   copying pept/utilities/cutpoints/find_minpoints.pyx -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:36,089   copying pept/utilities/cutpoints/find_minpoints_ext.c -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:36,093   copying pept/utilities/cutpoints/find_minpoints_ext.h -> build/lib.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:36,106   running build_ext
2021-07-29T15:05:36,111   building 'pept.scanners.parallel_screens.extensions.binary_converter' extension
2021-07-29T15:05:36,112   creating build/temp.linux-armv7l-3.9
2021-07-29T15:05:36,113   creating build/temp.linux-armv7l-3.9/pept
2021-07-29T15:05:36,114   creating build/temp.linux-armv7l-3.9/pept/scanners
2021-07-29T15:05:36,115   creating build/temp.linux-armv7l-3.9/pept/scanners/parallel_screens
2021-07-29T15:05:36,116   creating build/temp.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions
2021-07-29T15:05:36,117   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipept/scanners/parallel_screens/extensions -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/scanners/parallel_screens/extensions/binary_converter.c -o build/temp.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter.o -Ofast -flto
2021-07-29T15:05:36,536   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T15:05:36,537                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T15:05:36,537                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T15:05:36,537                    from pept/scanners/parallel_screens/extensions/binary_converter.c:644:
2021-07-29T15:05:36,537   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T15:05:36,537      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T15:05:36,537         |  ^~~~~~~
2021-07-29T15:05:37,231   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter.o -o build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:05:39,735   building 'pept.utilities.cutpoints.find_cutpoints' extension
2021-07-29T15:05:39,735   creating build/temp.linux-armv7l-3.9/pept/utilities
2021-07-29T15:05:39,736   creating build/temp.linux-armv7l-3.9/pept/utilities/cutpoints
2021-07-29T15:05:39,738   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/utilities/cutpoints/find_cutpoints.c -o build/temp.linux-armv7l-3.9/pept/utilities/cutpoints/find_cutpoints.o -Ofast -flto
2021-07-29T15:05:42,452   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/utilities/cutpoints/find_cutpoints.o -o build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_cutpoints.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:05:56,985   building 'pept.utilities.cutpoints.find_minpoints' extension
2021-07-29T15:05:56,986   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipept/utilities/cutpoints -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/utilities/cutpoints/find_minpoints.c -o build/temp.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints.o -Ofast -flto
2021-07-29T15:05:57,375   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T15:05:57,375                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T15:05:57,375                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T15:05:57,375                    from pept/utilities/cutpoints/find_minpoints.c:644:
2021-07-29T15:05:57,375   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T15:05:57,376      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T15:05:57,376         |  ^~~~~~~
2021-07-29T15:05:59,874   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints.o -o build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:06:14,731   building 'pept.processing.circles_ext' extension
2021-07-29T15:06:14,732   creating build/temp.linux-armv7l-3.9/pept/processing
2021-07-29T15:06:14,732   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/processing/circles_ext.c -o build/temp.linux-armv7l-3.9/pept/processing/circles_ext.o -Ofast -flto
2021-07-29T15:06:17,495   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/processing/circles_ext.o -o build/lib.linux-armv7l-3.9/pept/processing/circles_ext.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:06:31,991   building 'pept.processing.occupancy_ext' extension
2021-07-29T15:06:31,991   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipept/processing -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/processing/occupancy_ext.c -o build/temp.linux-armv7l-3.9/pept/processing/occupancy_ext.o -Ofast -flto
2021-07-29T15:06:34,777   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/processing/occupancy_ext.o -o build/lib.linux-armv7l-3.9/pept/processing/occupancy_ext.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:06:49,556   building 'pept.scanners.modular_camera.extensions.get_pept_event' extension
2021-07-29T15:06:49,557   creating build/temp.linux-armv7l-3.9/pept/scanners/modular_camera
2021-07-29T15:06:49,558   creating build/temp.linux-armv7l-3.9/pept/scanners/modular_camera/extensions
2021-07-29T15:06:49,564   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipept/scanners/modular_camera/extensions -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/scanners/modular_camera/extensions/get_pept_event.c -o build/temp.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event.o -Ofast -flto
2021-07-29T15:06:52,285   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event.o -o build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:07:06,505   building 'pept.utilities.traverse.traverse3d' extension
2021-07-29T15:07:06,506   creating build/temp.linux-armv7l-3.9/pept/utilities/traverse
2021-07-29T15:07:06,508   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/utilities/traverse/traverse3d.c -o build/temp.linux-armv7l-3.9/pept/utilities/traverse/traverse3d.o -O3 -flto
2021-07-29T15:07:09,193   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/utilities/traverse/traverse3d.o -o build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse3d.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:07:23,503   building 'pept.utilities.traverse.traverse2d' extension
2021-07-29T15:07:23,505   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/utilities/traverse/traverse2d.c -o build/temp.linux-armv7l-3.9/pept/utilities/traverse/traverse2d.o -O3 -flto
2021-07-29T15:07:26,148   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/utilities/traverse/traverse2d.o -o build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse2d.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:07:40,092   building 'pept.tracking.trajectory_separation.distance_matrix_reachable' extension
2021-07-29T15:07:40,093   creating build/temp.linux-armv7l-3.9/pept/tracking
2021-07-29T15:07:40,094   creating build/temp.linux-armv7l-3.9/pept/tracking/trajectory_separation
2021-07-29T15:07:40,095   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/tracking/trajectory_separation/distance_matrix_reachable.c -o build/temp.linux-armv7l-3.9/pept/tracking/trajectory_separation/distance_matrix_reachable.o -Ofast -flto
2021-07-29T15:07:40,482   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T15:07:40,482                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T15:07:40,482                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T15:07:40,482                    from pept/tracking/trajectory_separation/distance_matrix_reachable.c:643:
2021-07-29T15:07:40,482   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T15:07:40,483      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T15:07:40,483         |  ^~~~~~~
2021-07-29T15:07:43,005   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/tracking/trajectory_separation/distance_matrix_reachable.o -o build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/distance_matrix_reachable.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:07:58,147   building 'pept.tracking.birmingham_method.extensions.birmingham_method' extension
2021-07-29T15:07:58,148   creating build/temp.linux-armv7l-3.9/pept/tracking/birmingham_method
2021-07-29T15:07:58,148   creating build/temp.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions
2021-07-29T15:07:58,153   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipept/tracking/birmingham_method/extensions -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/tracking/birmingham_method/extensions/birmingham_method.c -o build/temp.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method.o -Ofast -flto
2021-07-29T15:07:58,552   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T15:07:58,552                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T15:07:58,552                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T15:07:58,553                    from pept/tracking/birmingham_method/extensions/birmingham_method.c:644:
2021-07-29T15:07:58,553   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T15:07:58,553      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T15:07:58,553         |  ^~~~~~~
2021-07-29T15:08:01,045   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method.o -o build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:08:15,719   building 'pept.tracking.fpi.fpi_ext' extension
2021-07-29T15:08:15,720   creating build/temp.linux-armv7l-3.9/pept/tracking/fpi
2021-07-29T15:08:15,724   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipept/tracking/fpi -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c pept/tracking/fpi/fpi_ext.cpp -o build/temp.linux-armv7l-3.9/pept/tracking/fpi/fpi_ext.o -Ofast -flto
2021-07-29T15:08:16,020   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-29T15:08:16,021                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-29T15:08:16,021                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-29T15:08:16,021                    from pept/tracking/fpi/fpi_ext.cpp:658:
2021-07-29T15:08:16,021   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-29T15:08:16,022      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-29T15:08:16,022         |  ^~~~~~~
2021-07-29T15:08:20,220   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/pept/tracking/fpi/fpi_ext.o -o build/lib.linux-armv7l-3.9/pept/tracking/fpi/fpi_ext.cpython-39-arm-linux-gnueabihf.so -flto
2021-07-29T15:08:36,344   installing to build/bdist.linux-armv7l/wheel
2021-07-29T15:08:36,344   running install
2021-07-29T15:08:36,346   running install_lib
2021-07-29T15:08:36,351   creating build/bdist.linux-armv7l
2021-07-29T15:08:36,352   creating build/bdist.linux-armv7l/wheel
2021-07-29T15:08:36,355   creating build/bdist.linux-armv7l/wheel/pept
2021-07-29T15:08:36,357   creating build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,358   copying build/lib.linux-armv7l-3.9/pept/base/__init__.py -> build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,361   copying build/lib.linux-armv7l-3.9/pept/base/voxel_data.py -> build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,366   copying build/lib.linux-armv7l-3.9/pept/base/point_data.py -> build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,369   copying build/lib.linux-armv7l-3.9/pept/base/pixel_data.py -> build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,372   copying build/lib.linux-armv7l-3.9/pept/base/iterable_samples.py -> build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,375   copying build/lib.linux-armv7l-3.9/pept/base/line_data.py -> build/bdist.linux-armv7l/wheel/pept/base
2021-07-29T15:08:36,379   creating build/bdist.linux-armv7l/wheel/pept/cookbook
2021-07-29T15:08:36,380   copying build/lib.linux-armv7l-3.9/pept/cookbook/__init__.py -> build/bdist.linux-armv7l/wheel/pept/cookbook
2021-07-29T15:08:36,382   copying build/lib.linux-armv7l-3.9/pept/cookbook/peptml.py -> build/bdist.linux-armv7l/wheel/pept/cookbook
2021-07-29T15:08:36,387   creating build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,388   copying build/lib.linux-armv7l-3.9/pept/processing/rtd2d.c -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,391   copying build/lib.linux-armv7l-3.9/pept/processing/__init__.py -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,393   copying build/lib.linux-armv7l-3.9/pept/processing/occupancy_ext.pyx -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,396   copying build/lib.linux-armv7l-3.9/pept/processing/rtd2d.h -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,398   copying build/lib.linux-armv7l-3.9/pept/processing/circles_ext.pyx -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,401   copying build/lib.linux-armv7l-3.9/pept/processing/r2d.h -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,405   copying build/lib.linux-armv7l-3.9/pept/processing/occupancy_ext.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,433   copying build/lib.linux-armv7l-3.9/pept/processing/occupancy_ext.c -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,454   copying build/lib.linux-armv7l-3.9/pept/processing/occupancy.py -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,457   copying build/lib.linux-armv7l-3.9/pept/processing/circles_ext.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,481   copying build/lib.linux-armv7l-3.9/pept/processing/circles_ext.c -> build/bdist.linux-armv7l/wheel/pept/processing
2021-07-29T15:08:36,508   copying build/lib.linux-armv7l-3.9/pept/__init__.py -> build/bdist.linux-armv7l/wheel/pept
2021-07-29T15:08:36,512   creating build/bdist.linux-armv7l/wheel/pept/tracking
2021-07-29T15:08:36,513   copying build/lib.linux-armv7l-3.9/pept/tracking/__init__.py -> build/bdist.linux-armv7l/wheel/pept/tracking
2021-07-29T15:08:36,516   creating build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method
2021-07-29T15:08:36,517   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/__init__.py -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method
2021-07-29T15:08:36,521   creating build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method/extensions
2021-07-29T15:08:36,522   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method.pyx -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method/extensions
2021-07-29T15:08:36,525   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method_ext.c -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method/extensions
2021-07-29T15:08:36,528   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method.c -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method/extensions
2021-07-29T15:08:36,550   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method/extensions
2021-07-29T15:08:36,575   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/extensions/birmingham_method_ext.h -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method/extensions
2021-07-29T15:08:36,578   copying build/lib.linux-armv7l-3.9/pept/tracking/birmingham_method/birmingham_method.py -> build/bdist.linux-armv7l/wheel/pept/tracking/birmingham_method
2021-07-29T15:08:36,581   creating build/bdist.linux-armv7l/wheel/pept/tracking/peptml
2021-07-29T15:08:36,583   copying build/lib.linux-armv7l-3.9/pept/tracking/peptml/__init__.py -> build/bdist.linux-armv7l/wheel/pept/tracking/peptml
2021-07-29T15:08:36,585   copying build/lib.linux-armv7l-3.9/pept/tracking/peptml/cutpoints.py -> build/bdist.linux-armv7l/wheel/pept/tracking/peptml
2021-07-29T15:08:36,588   copying build/lib.linux-armv7l-3.9/pept/tracking/peptml/peptml.py -> build/bdist.linux-armv7l/wheel/pept/tracking/peptml
2021-07-29T15:08:36,592   copying build/lib.linux-armv7l-3.9/pept/tracking/peptml/minpoints.py -> build/bdist.linux-armv7l/wheel/pept/tracking/peptml
2021-07-29T15:08:36,596   creating build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,597   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/__init__.py -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,600   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/fpi_ext.cpp -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,626   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/fpi_ext.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,653   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/fpi.py -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,656   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/PeptStructures.hpp -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,659   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/fpi_ext.pyx -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,662   copying build/lib.linux-armv7l-3.9/pept/tracking/fpi/calcPosFPI.hpp -> build/bdist.linux-armv7l/wheel/pept/tracking/fpi
2021-07-29T15:08:36,666   creating build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,667   copying build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/__init__.py -> build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,669   copying build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/distance_matrix_reachable.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,698   copying build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/trajectory_separation.py -> build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,701   copying build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/distance_matrix_reachable.c -> build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,733   copying build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/tco.py -> build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,735   copying build/lib.linux-armv7l-3.9/pept/tracking/trajectory_separation/distance_matrix_reachable.pyx -> build/bdist.linux-armv7l/wheel/pept/tracking/trajectory_separation
2021-07-29T15:08:36,738   creating build/bdist.linux-armv7l/wheel/pept/tests
2021-07-29T15:08:36,739   creating build/bdist.linux-armv7l/wheel/pept/tests/unit
2021-07-29T15:08:36,740   copying build/lib.linux-armv7l-3.9/pept/tests/unit/test_base_classes.py -> build/bdist.linux-armv7l/wheel/pept/tests/unit
2021-07-29T15:08:36,743   creating build/bdist.linux-armv7l/wheel/pept/scanners
2021-07-29T15:08:36,744   copying build/lib.linux-armv7l-3.9/pept/scanners/__init__.py -> build/bdist.linux-armv7l/wheel/pept/scanners
2021-07-29T15:08:36,747   creating build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera
2021-07-29T15:08:36,748   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/__init__.py -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera
2021-07-29T15:08:36,751   creating build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera/extensions
2021-07-29T15:08:36,752   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event.c -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera/extensions
2021-07-29T15:08:36,776   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event.pyx -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera/extensions
2021-07-29T15:08:36,778   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event_ext.h -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera/extensions
2021-07-29T15:08:36,780   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event_ext.c -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera/extensions
2021-07-29T15:08:36,782   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/extensions/get_pept_event.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera/extensions
2021-07-29T15:08:36,812   copying build/lib.linux-armv7l-3.9/pept/scanners/modular_camera/modular_camera.py -> build/bdist.linux-armv7l/wheel/pept/scanners/modular_camera
2021-07-29T15:08:36,815   creating build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens
2021-07-29T15:08:36,816   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/__init__.py -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens
2021-07-29T15:08:36,819   creating build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,820   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/__init__.py -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,822   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter_ext.h -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,824   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,831   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter.pyx -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,833   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter_ext.c -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,836   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/extensions/binary_converter.c -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens/extensions
2021-07-29T15:08:36,845   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/parallel_screens.py -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens
2021-07-29T15:08:36,848   copying build/lib.linux-armv7l-3.9/pept/scanners/parallel_screens/adac_forte.py -> build/bdist.linux-armv7l/wheel/pept/scanners/parallel_screens
2021-07-29T15:08:36,851   creating build/bdist.linux-armv7l/wheel/pept/utilities
2021-07-29T15:08:36,852   copying build/lib.linux-armv7l-3.9/pept/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/pept/utilities
2021-07-29T15:08:36,854   creating build/bdist.linux-armv7l/wheel/pept/utilities/parallel
2021-07-29T15:08:36,855   copying build/lib.linux-armv7l-3.9/pept/utilities/parallel/__init__.py -> build/bdist.linux-armv7l/wheel/pept/utilities/parallel
2021-07-29T15:08:36,857   copying build/lib.linux-armv7l-3.9/pept/utilities/parallel/parallel_map.py -> build/bdist.linux-armv7l/wheel/pept/utilities/parallel
2021-07-29T15:08:36,860   creating build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,861   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse3d.c -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,883   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/__init__.py -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,885   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse2d.c -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,904   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse2d.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,930   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse3d.pyx -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,932   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse2d.pyx -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,935   copying build/lib.linux-armv7l-3.9/pept/utilities/traverse/traverse3d.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/utilities/traverse
2021-07-29T15:08:36,961   creating build/bdist.linux-armv7l/wheel/pept/utilities/misc
2021-07-29T15:08:36,962   copying build/lib.linux-armv7l-3.9/pept/utilities/misc/__init__.py -> build/bdist.linux-armv7l/wheel/pept/utilities/misc
2021-07-29T15:08:36,964   copying build/lib.linux-armv7l-3.9/pept/utilities/misc/aggregate.py -> build/bdist.linux-armv7l/wheel/pept/utilities/misc
2021-07-29T15:08:36,966   copying build/lib.linux-armv7l-3.9/pept/utilities/misc/read_csv.py -> build/bdist.linux-armv7l/wheel/pept/utilities/misc
2021-07-29T15:08:36,970   creating build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:36,971   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_cutpoints.c -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:36,992   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_cutpoints.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,018   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/__init__.py -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,020   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_cutpoints.pyx -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,022   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints_ext.h -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,024   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,050   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints.c -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,074   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints_ext.c -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,077   copying build/lib.linux-armv7l-3.9/pept/utilities/cutpoints/find_minpoints.pyx -> build/bdist.linux-armv7l/wheel/pept/utilities/cutpoints
2021-07-29T15:08:37,080   creating build/bdist.linux-armv7l/wheel/pept/simulation
2021-07-29T15:08:37,081   copying build/lib.linux-armv7l-3.9/pept/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/pept/simulation
2021-07-29T15:08:37,083   copying build/lib.linux-armv7l-3.9/pept/simulation/peptsim.py -> build/bdist.linux-armv7l/wheel/pept/simulation
2021-07-29T15:08:37,086   creating build/bdist.linux-armv7l/wheel/pept/visualisation
2021-07-29T15:08:37,087   copying build/lib.linux-armv7l-3.9/pept/visualisation/plotly_grapher.py -> build/bdist.linux-armv7l/wheel/pept/visualisation
2021-07-29T15:08:37,091   copying build/lib.linux-armv7l-3.9/pept/visualisation/__init__.py -> build/bdist.linux-armv7l/wheel/pept/visualisation
2021-07-29T15:08:37,093   copying build/lib.linux-armv7l-3.9/pept/visualisation/plotly_grapher2d.py -> build/bdist.linux-armv7l/wheel/pept/visualisation
2021-07-29T15:08:37,097   creating build/bdist.linux-armv7l/wheel/pept/diagnostics
2021-07-29T15:08:37,098   copying build/lib.linux-armv7l-3.9/pept/diagnostics/__init__.py -> build/bdist.linux-armv7l/wheel/pept/diagnostics
2021-07-29T15:08:37,100   copying build/lib.linux-armv7l-3.9/pept/__version__.py -> build/bdist.linux-armv7l/wheel/pept
2021-07-29T15:08:37,101   running install_egg_info
2021-07-29T15:08:37,112   Copying pept.egg-info to build/bdist.linux-armv7l/wheel/pept-0.3.0-py3.9.egg-info
2021-07-29T15:08:37,126   running install_scripts
2021-07-29T15:08:37,196   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-29T15:08:37,202   creating build/bdist.linux-armv7l/wheel/pept-0.3.0.dist-info/WHEEL
2021-07-29T15:08:37,205   creating '/tmp/pip-wheel-ul2s0rb9/pept-0.3.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-29T15:08:37,209   adding 'pept/__init__.py'
2021-07-29T15:08:37,210   adding 'pept/__version__.py'
2021-07-29T15:08:37,212   adding 'pept/base/__init__.py'
2021-07-29T15:08:37,214   adding 'pept/base/iterable_samples.py'
2021-07-29T15:08:37,218   adding 'pept/base/line_data.py'
2021-07-29T15:08:37,222   adding 'pept/base/pixel_data.py'
2021-07-29T15:08:37,226   adding 'pept/base/point_data.py'
2021-07-29T15:08:37,234   adding 'pept/base/voxel_data.py'
2021-07-29T15:08:37,236   adding 'pept/cookbook/__init__.py'
2021-07-29T15:08:37,242   adding 'pept/cookbook/peptml.py'
2021-07-29T15:08:37,244   adding 'pept/diagnostics/__init__.py'
2021-07-29T15:08:37,246   adding 'pept/processing/__init__.py'
2021-07-29T15:08:37,315   adding 'pept/processing/circles_ext.c'
2021-07-29T15:08:37,517   adding 'pept/processing/circles_ext.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:37,527   adding 'pept/processing/circles_ext.pyx'
2021-07-29T15:08:37,529   adding 'pept/processing/occupancy.py'
2021-07-29T15:08:37,592   adding 'pept/processing/occupancy_ext.c'
2021-07-29T15:08:37,795   adding 'pept/processing/occupancy_ext.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:37,804   adding 'pept/processing/occupancy_ext.pyx'
2021-07-29T15:08:37,808   adding 'pept/processing/r2d.h'
2021-07-29T15:08:37,810   adding 'pept/processing/rtd2d.c'
2021-07-29T15:08:37,811   adding 'pept/processing/rtd2d.h'
2021-07-29T15:08:37,813   adding 'pept/scanners/__init__.py'
2021-07-29T15:08:37,815   adding 'pept/scanners/modular_camera/__init__.py'
2021-07-29T15:08:37,817   adding 'pept/scanners/modular_camera/modular_camera.py'
2021-07-29T15:08:37,883   adding 'pept/scanners/modular_camera/extensions/get_pept_event.c'
2021-07-29T15:08:38,085   adding 'pept/scanners/modular_camera/extensions/get_pept_event.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:38,094   adding 'pept/scanners/modular_camera/extensions/get_pept_event.pyx'
2021-07-29T15:08:38,095   adding 'pept/scanners/modular_camera/extensions/get_pept_event_ext.c'
2021-07-29T15:08:38,097   adding 'pept/scanners/modular_camera/extensions/get_pept_event_ext.h'
2021-07-29T15:08:38,098   adding 'pept/scanners/parallel_screens/__init__.py'
2021-07-29T15:08:38,100   adding 'pept/scanners/parallel_screens/adac_forte.py'
2021-07-29T15:08:38,102   adding 'pept/scanners/parallel_screens/parallel_screens.py'
2021-07-29T15:08:38,103   adding 'pept/scanners/parallel_screens/extensions/__init__.py'
2021-07-29T15:08:38,126   adding 'pept/scanners/parallel_screens/extensions/binary_converter.c'
2021-07-29T15:08:38,163   adding 'pept/scanners/parallel_screens/extensions/binary_converter.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:38,166   adding 'pept/scanners/parallel_screens/extensions/binary_converter.pyx'
2021-07-29T15:08:38,168   adding 'pept/scanners/parallel_screens/extensions/binary_converter_ext.c'
2021-07-29T15:08:38,170   adding 'pept/scanners/parallel_screens/extensions/binary_converter_ext.h'
2021-07-29T15:08:38,171   adding 'pept/simulation/__init__.py'
2021-07-29T15:08:38,173   adding 'pept/simulation/peptsim.py'
2021-07-29T15:08:38,175   adding 'pept/tests/unit/test_base_classes.py'
2021-07-29T15:08:38,177   adding 'pept/tracking/__init__.py'
2021-07-29T15:08:38,179   adding 'pept/tracking/birmingham_method/__init__.py'
2021-07-29T15:08:38,182   adding 'pept/tracking/birmingham_method/birmingham_method.py'
2021-07-29T15:08:38,253   adding 'pept/tracking/birmingham_method/extensions/birmingham_method.c'
2021-07-29T15:08:38,457   adding 'pept/tracking/birmingham_method/extensions/birmingham_method.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:38,467   adding 'pept/tracking/birmingham_method/extensions/birmingham_method.pyx'
2021-07-29T15:08:38,469   adding 'pept/tracking/birmingham_method/extensions/birmingham_method_ext.c'
2021-07-29T15:08:38,470   adding 'pept/tracking/birmingham_method/extensions/birmingham_method_ext.h'
2021-07-29T15:08:38,472   adding 'pept/tracking/fpi/PeptStructures.hpp'
2021-07-29T15:08:38,473   adding 'pept/tracking/fpi/__init__.py'
2021-07-29T15:08:38,476   adding 'pept/tracking/fpi/calcPosFPI.hpp'
2021-07-29T15:08:38,478   adding 'pept/tracking/fpi/fpi.py'
2021-07-29T15:08:38,547   adding 'pept/tracking/fpi/fpi_ext.cpp'
2021-07-29T15:08:38,779   adding 'pept/tracking/fpi/fpi_ext.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:38,790   adding 'pept/tracking/fpi/fpi_ext.pyx'
2021-07-29T15:08:38,792   adding 'pept/tracking/peptml/__init__.py'
2021-07-29T15:08:38,794   adding 'pept/tracking/peptml/cutpoints.py'
2021-07-29T15:08:38,797   adding 'pept/tracking/peptml/minpoints.py'
2021-07-29T15:08:38,803   adding 'pept/tracking/peptml/peptml.py'
2021-07-29T15:08:38,805   adding 'pept/tracking/trajectory_separation/__init__.py'
2021-07-29T15:08:38,875   adding 'pept/tracking/trajectory_separation/distance_matrix_reachable.c'
2021-07-29T15:08:39,084   adding 'pept/tracking/trajectory_separation/distance_matrix_reachable.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:39,093   adding 'pept/tracking/trajectory_separation/distance_matrix_reachable.pyx'
2021-07-29T15:08:39,095   adding 'pept/tracking/trajectory_separation/tco.py'
2021-07-29T15:08:39,098   adding 'pept/tracking/trajectory_separation/trajectory_separation.py'
2021-07-29T15:08:39,100   adding 'pept/utilities/__init__.py'
2021-07-29T15:08:39,102   adding 'pept/utilities/cutpoints/__init__.py'
2021-07-29T15:08:39,167   adding 'pept/utilities/cutpoints/find_cutpoints.c'
2021-07-29T15:08:39,369   adding 'pept/utilities/cutpoints/find_cutpoints.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:39,379   adding 'pept/utilities/cutpoints/find_cutpoints.pyx'
2021-07-29T15:08:39,447   adding 'pept/utilities/cutpoints/find_minpoints.c'
2021-07-29T15:08:39,654   adding 'pept/utilities/cutpoints/find_minpoints.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:39,663   adding 'pept/utilities/cutpoints/find_minpoints.pyx'
2021-07-29T15:08:39,665   adding 'pept/utilities/cutpoints/find_minpoints_ext.c'
2021-07-29T15:08:39,667   adding 'pept/utilities/cutpoints/find_minpoints_ext.h'
2021-07-29T15:08:39,668   adding 'pept/utilities/misc/__init__.py'
2021-07-29T15:08:39,669   adding 'pept/utilities/misc/aggregate.py'
2021-07-29T15:08:39,672   adding 'pept/utilities/misc/read_csv.py'
2021-07-29T15:08:39,674   adding 'pept/utilities/parallel/__init__.py'
2021-07-29T15:08:39,675   adding 'pept/utilities/parallel/parallel_map.py'
2021-07-29T15:08:39,677   adding 'pept/utilities/traverse/__init__.py'
2021-07-29T15:08:39,743   adding 'pept/utilities/traverse/traverse2d.c'
2021-07-29T15:08:39,941   adding 'pept/utilities/traverse/traverse2d.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:39,950   adding 'pept/utilities/traverse/traverse2d.pyx'
2021-07-29T15:08:40,016   adding 'pept/utilities/traverse/traverse3d.c'
2021-07-29T15:08:40,215   adding 'pept/utilities/traverse/traverse3d.cpython-39-arm-linux-gnueabihf.so'
2021-07-29T15:08:40,225   adding 'pept/utilities/traverse/traverse3d.pyx'
2021-07-29T15:08:40,227   adding 'pept/visualisation/__init__.py'
2021-07-29T15:08:40,231   adding 'pept/visualisation/plotly_grapher.py'
2021-07-29T15:08:40,235   adding 'pept/visualisation/plotly_grapher2d.py'
2021-07-29T15:08:40,242   adding 'pept-0.3.0.dist-info/LICENSE'
2021-07-29T15:08:40,245   adding 'pept-0.3.0.dist-info/METADATA'
2021-07-29T15:08:40,246   adding 'pept-0.3.0.dist-info/WHEEL'
2021-07-29T15:08:40,247   adding 'pept-0.3.0.dist-info/top_level.txt'
2021-07-29T15:08:40,249   adding 'pept-0.3.0.dist-info/RECORD'
2021-07-29T15:08:40,326   removing build/bdist.linux-armv7l/wheel
2021-07-29T15:08:40,529   Building wheel for pept (setup.py): finished with status 'done'
2021-07-29T15:08:40,598   Created wheel for pept: filename=pept-0.3.0-cp39-cp39-linux_armv7l.whl size=5081487 sha256=99b0f3c059e56b51a6979978c3bcc5085c66dfeee04b23bf8305e728eae75b52
2021-07-29T15:08:40,598   Stored in directory: /tmp/pip-ephem-wheel-cache-0v8_9jfu/wheels/e3/4d/0f/24d396e04059c7494bb18d4885cd4e6598fcef48701e786768
2021-07-29T15:08:40,614 Successfully built pept
2021-07-29T15:08:40,769 Removed build tracker: '/tmp/pip-req-tracker-360326tm'