2021-07-29T17:30:01,613 Created temporary directory: /tmp/pip-ephem-wheel-cache-arfxykj7 2021-07-29T17:30:01,617 Created temporary directory: /tmp/pip-req-tracker-uyr61xsw 2021-07-29T17:30:01,617 Initialized build tracking at /tmp/pip-req-tracker-uyr61xsw 2021-07-29T17:30:01,617 Created build tracker: /tmp/pip-req-tracker-uyr61xsw 2021-07-29T17:30:01,617 Entered build tracker: /tmp/pip-req-tracker-uyr61xsw 2021-07-29T17:30:01,618 Created temporary directory: /tmp/pip-wheel-nkobz9pm 2021-07-29T17:30:01,646 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-29T17:30:01,646 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-29T17:30:01,646 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-29T17:30:01,647 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-29T17:30:01,647 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-29T17:30:01,649 WARNING: Location '/flowkit/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T17:30:01,650 WARNING: Location 't/flowkit/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T17:30:01,650 WARNING: Location 'm/flowkit/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T17:30:01,650 WARNING: Location 'p/flowkit/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T17:30:01,650 1 location(s) to search for versions of flowkit: 2021-07-29T17:30:01,650 * https://pypi.org/simple/flowkit/ 2021-07-29T17:30:01,651 Fetching project page and analyzing links: https://pypi.org/simple/flowkit/ 2021-07-29T17:30:01,651 Getting page https://pypi.org/simple/flowkit/ 2021-07-29T17:30:01,653 Found index url https://pypi.org/simple 2021-07-29T17:30:01,848 Skipping link: No binaries permitted for flowkit: https://files.pythonhosted.org/packages/f7/10/0fec8c59ea005f06ffbf88744e6edea7187678daf28b914b1b7d0ba79b6d/FlowKit-0.0.2-py3-none-any.whl#sha256=2ba4d89f818a141ef5d6841cc7f6a57274eddc306d64b37268281d9194cfe542 (from https://pypi.org/simple/flowkit/) 2021-07-29T17:30:01,849 Found link https://files.pythonhosted.org/packages/c5/5c/40de07f665d7398d3f2b84be0823f09f5e89d97cb9ef2f045c45438a567f/FlowKit-0.0.2.tar.gz#sha256=eb8b335bd5c4368bcd8287e16eccde51a3ff6ad45df8b66126aa442be0dd9899 (from https://pypi.org/simple/flowkit/), version: 0.0.2 2021-07-29T17:30:01,849 Skipping link: No binaries permitted for flowkit: https://files.pythonhosted.org/packages/58/f9/13e15ff494bbe7c69f12156024de380d70a120e973aa751093f4a7fca948/FlowKit-0.0.3-py3-none-any.whl#sha256=df61110c771d067314cead83bb459af42a3d4272c1ac7a00de0d8e3167c2f436 (from https://pypi.org/simple/flowkit/) 2021-07-29T17:30:01,849 Found link https://files.pythonhosted.org/packages/32/53/3e6646520678e850f7684048096b533e3f65027d62dd2b880a8991ff769b/FlowKit-0.0.3.tar.gz#sha256=35cf02fdf1eefb11f95c4824ec37dcd34042df45bca0ad9c521d381c9a84dc13 (from https://pypi.org/simple/flowkit/), version: 0.0.3 2021-07-29T17:30:01,850 Skipping link: No binaries permitted for flowkit: https://files.pythonhosted.org/packages/3f/2e/652e2ae0629af4608e029da3d8f6459f41b4ea373eb6e32f0e1ad4a83277/FlowKit-0.0.4-py3-none-any.whl#sha256=6360002fdb14c7a3347bfe025f398858fa0be0cee74baff46eeb27590b468b5c (from https://pypi.org/simple/flowkit/) 2021-07-29T17:30:01,850 Found link https://files.pythonhosted.org/packages/7a/4a/0b3afa3eb482b48ad958dd818919133ce1e47df23ebb410eae9a75fc30bd/FlowKit-0.0.4.tar.gz#sha256=d7d36ad134d31c024d5000030c13aa7545a7d12730db4973a0b18d4d70b27cf5 (from https://pypi.org/simple/flowkit/), version: 0.0.4 2021-07-29T17:30:01,850 Skipping link: No binaries permitted for flowkit: https://files.pythonhosted.org/packages/98/04/782ef896ae63ebacbbc5b678b9be97b099cc62ce989a674577a4f94777c6/FlowKit-0.0.9-py3-none-any.whl#sha256=99ae531b7cfc317c9c0bbfc841a7038dd698ed60ead375abafae5e9dafe8a410 (from https://pypi.org/simple/flowkit/) 2021-07-29T17:30:01,851 Found link https://files.pythonhosted.org/packages/33/b7/548a3299e217c2ca71f1aa0c4290316b7216f1b579895a4e45898809e992/FlowKit-0.0.9.tar.gz#sha256=ee941f45c580116a811cd2a04541388cf6b6872eb99034d44437f1bce4cdbbdf (from https://pypi.org/simple/flowkit/), version: 0.0.9 2021-07-29T17:30:01,851 Skipping link: No binaries permitted for flowkit: https://files.pythonhosted.org/packages/6f/61/75562685b8e398311e796a55d4f9c3d63ba7ff4194d8926986442fdf7146/FlowKit-0.1.0-py3-none-any.whl#sha256=ec0005f9bf6ad0bdf34884ae0d923ef7f73dd2bbcc04ed2fcebe6e0fcac7b388 (from https://pypi.org/simple/flowkit/) 2021-07-29T17:30:01,851 Found link https://files.pythonhosted.org/packages/9b/6a/1d33fe890e519a60ad5a5680369cccb812c8a1869cf9771b09b06e30c765/FlowKit-0.1.0.tar.gz#sha256=bf57c845581d8484cd6994ae9f64d3bdcbeaa0382e8c59de1d5cbbc7116acc70 (from https://pypi.org/simple/flowkit/), version: 0.1.0 2021-07-29T17:30:01,852 Found link https://files.pythonhosted.org/packages/56/d6/6b1f4af15c19a4b55da79acb7235d716ca50ba76d72b713f261f5f094577/FlowKit-0.2.2.tar.gz#sha256=4bcbea186e5c1437f9c9530880eb4befe8501472ecdc2334798bff90e3cfd5f8 (from https://pypi.org/simple/flowkit/), version: 0.2.2 2021-07-29T17:30:01,852 Found link https://files.pythonhosted.org/packages/bf/e5/a45fa1b9d0379f7986289793a80afcd7ffbf3e93c2e00e3462dc16560349/FlowKit-0.3.1.tar.gz#sha256=27f4346656ae7c6f1e4b4c50dd888c8e0b26fe1a1b3dbc681a2cc26a0b3eb79a (from https://pypi.org/simple/flowkit/), version: 0.3.1 2021-07-29T17:30:01,853 Found link https://files.pythonhosted.org/packages/1a/4f/ace39bc9893f1ae4ab356d9c765f20b995cf63fb4a8e867fbc0ad5951237/FlowKit-0.3.2.tar.gz#sha256=511320c0034faa05db00eed11a5b14ff02be1d8919476a76bdb9315b84808746 (from https://pypi.org/simple/flowkit/), version: 0.3.2 2021-07-29T17:30:01,853 Found link https://files.pythonhosted.org/packages/73/45/32ca6cd7b1c2f7f50bf1a0837d7b5a92d98e7b68b6647b1f3710e92c9dcc/FlowKit-0.4.0.tar.gz#sha256=345c881d7c3d0dccb8f6d47cfd8fda50f24361dfc09660ffc5e0e393dfe0a0ad (from https://pypi.org/simple/flowkit/), version: 0.4.0 2021-07-29T17:30:01,853 Found link https://files.pythonhosted.org/packages/81/3e/3d84a395818fcd60e4644256cc45592a2cf1eb64817d77fdeacc86d805ba/FlowKit-0.5.0.tar.gz#sha256=c2a9c17ec2b66720a53b7c8431bb7d2f243447084a80e37a1b4da5d6b74390a1 (from https://pypi.org/simple/flowkit/), version: 0.5.0 2021-07-29T17:30:01,854 Found link https://files.pythonhosted.org/packages/5f/0a/b4f8069000912fcce7fcca19f48ad24a684acd17fa3d818f42e4161cb4ee/FlowKit-0.6.0.tar.gz#sha256=053796c785185c96d232d337b359fe9a87f17f44ffd94254ff6391881a10cd48 (from https://pypi.org/simple/flowkit/), version: 0.6.0 2021-07-29T17:30:01,854 Found link https://files.pythonhosted.org/packages/f2/7f/1353da7a03699bca368b2755cad8a00bf6e788a9f1193e79d9cd8883749d/FlowKit-0.6.1.tar.gz#sha256=b89b26379983566861572d96ac04af6447aa0b8c91469d581a174b8357c50930 (from https://pypi.org/simple/flowkit/), version: 0.6.1 2021-07-29T17:30:01,855 Skipping link: not a file: https://pypi.org/simple/flowkit/ 2021-07-29T17:30:01,876 Given no hashes to check 1 links for project 'flowkit': discarding no candidates 2021-07-29T17:30:01,896 Collecting flowkit==0.6.0 2021-07-29T17:30:01,898 Created temporary directory: /tmp/pip-unpack-8y50vau3 2021-07-29T17:30:02,072 Downloading FlowKit-0.6.0.tar.gz (88 kB) 2021-07-29T17:30:02,265 Added flowkit==0.6.0 from https://files.pythonhosted.org/packages/5f/0a/b4f8069000912fcce7fcca19f48ad24a684acd17fa3d818f42e4161cb4ee/FlowKit-0.6.0.tar.gz#sha256=053796c785185c96d232d337b359fe9a87f17f44ffd94254ff6391881a10cd48 to build tracker '/tmp/pip-req-tracker-uyr61xsw' 2021-07-29T17:30:02,266 Running setup.py (path:/tmp/pip-wheel-nkobz9pm/flowkit_866a2e7e1c784385adf47c4f23c03564/setup.py) egg_info for package flowkit 2021-07-29T17:30:02,267 Created temporary directory: /tmp/pip-pip-egg-info-qwmaizaq 2021-07-29T17:30:02,267 Running command python setup.py egg_info 2021-07-29T17:30:03,466 running egg_info 2021-07-29T17:30:03,468 creating /tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info 2021-07-29T17:30:03,469 writing /tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/PKG-INFO 2021-07-29T17:30:03,472 writing dependency_links to /tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/dependency_links.txt 2021-07-29T17:30:03,474 writing requirements to /tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/requires.txt 2021-07-29T17:30:03,475 writing top-level names to /tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/top_level.txt 2021-07-29T17:30:03,477 writing manifest file '/tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/SOURCES.txt' 2021-07-29T17:30:03,829 reading manifest file '/tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/SOURCES.txt' 2021-07-29T17:30:03,830 reading manifest template 'MANIFEST.in' 2021-07-29T17:30:03,860 adding license file 'LICENSE' 2021-07-29T17:30:03,865 writing manifest file '/tmp/pip-pip-egg-info-qwmaizaq/FlowKit.egg-info/SOURCES.txt' 2021-07-29T17:30:03,973 Source in /tmp/pip-wheel-nkobz9pm/flowkit_866a2e7e1c784385adf47c4f23c03564 has version 0.6.0, which satisfies requirement flowkit==0.6.0 from https://files.pythonhosted.org/packages/5f/0a/b4f8069000912fcce7fcca19f48ad24a684acd17fa3d818f42e4161cb4ee/FlowKit-0.6.0.tar.gz#sha256=053796c785185c96d232d337b359fe9a87f17f44ffd94254ff6391881a10cd48 2021-07-29T17:30:03,974 Removed flowkit==0.6.0 from https://files.pythonhosted.org/packages/5f/0a/b4f8069000912fcce7fcca19f48ad24a684acd17fa3d818f42e4161cb4ee/FlowKit-0.6.0.tar.gz#sha256=053796c785185c96d232d337b359fe9a87f17f44ffd94254ff6391881a10cd48 from build tracker '/tmp/pip-req-tracker-uyr61xsw' 2021-07-29T17:30:03,978 Created temporary directory: /tmp/pip-unpack-dsh2wt05 2021-07-29T17:30:03,979 Building wheels for collected packages: flowkit 2021-07-29T17:30:03,983 Created temporary directory: /tmp/pip-wheel-6zir4r89 2021-07-29T17:30:03,984 Building wheel for flowkit (setup.py): started 2021-07-29T17:30:03,984 Destination directory: /tmp/pip-wheel-6zir4r89 2021-07-29T17:30:03,984 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-nkobz9pm/flowkit_866a2e7e1c784385adf47c4f23c03564/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-nkobz9pm/flowkit_866a2e7e1c784385adf47c4f23c03564/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6zir4r89 2021-07-29T17:30:05,129 running bdist_wheel 2021-07-29T17:30:05,325 running build 2021-07-29T17:30:05,325 running build_py 2021-07-29T17:30:05,463 creating build 2021-07-29T17:30:05,463 creating build/lib.linux-armv7l-3.9 2021-07-29T17:30:05,464 creating build/lib.linux-armv7l-3.9/flowkit 2021-07-29T17:30:05,466 copying flowkit/__init__.py -> build/lib.linux-armv7l-3.9/flowkit 2021-07-29T17:30:05,469 creating build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,470 copying flowkit/_models/dimension.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,473 copying flowkit/_models/session.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,476 copying flowkit/_models/vertex.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,478 copying flowkit/_models/gating_strategy.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,481 copying flowkit/_models/gating_results.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,484 copying flowkit/_models/__init__.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,486 copying flowkit/_models/sample.py -> build/lib.linux-armv7l-3.9/flowkit/_models 2021-07-29T17:30:05,491 creating build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,492 copying flowkit/tests/transform_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,496 copying flowkit/tests/plot_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,498 copying flowkit/tests/gating_strategy_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,502 copying flowkit/tests/session_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,505 copying flowkit/tests/sample_utils_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,507 copying flowkit/tests/flowjo_wsp_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,510 copying flowkit/tests/gating_strategy_prog_gate_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,514 copying flowkit/tests/matrix_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,517 copying flowkit/tests/gatingml_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,521 copying flowkit/tests/export_gml_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,525 copying flowkit/tests/string_repr_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,528 copying flowkit/tests/__init__.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,531 copying flowkit/tests/sample_tests.py -> build/lib.linux-armv7l-3.9/flowkit/tests 2021-07-29T17:30:05,535 creating build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,536 copying flowkit/_utils/plot_utils.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,539 copying flowkit/_utils/qc_utils.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,542 copying flowkit/_utils/__init__.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,544 copying flowkit/_utils/xml_utils.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,548 copying flowkit/_utils/gate_utils.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,550 copying flowkit/_utils/sample_utils.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,553 copying flowkit/_utils/wsp_utils.py -> build/lib.linux-armv7l-3.9/flowkit/_utils 2021-07-29T17:30:05,557 creating build/lib.linux-armv7l-3.9/flowkit/_resources 2021-07-29T17:30:05,559 copying flowkit/_resources/__init__.py -> build/lib.linux-armv7l-3.9/flowkit/_resources 2021-07-29T17:30:05,562 creating build/lib.linux-armv7l-3.9/flowkit/_models/gates 2021-07-29T17:30:05,563 copying flowkit/_models/gates/_wsp_gates.py -> build/lib.linux-armv7l-3.9/flowkit/_models/gates 2021-07-29T17:30:05,566 copying flowkit/_models/gates/_gates.py -> build/lib.linux-armv7l-3.9/flowkit/_models/gates 2021-07-29T17:30:05,570 copying flowkit/_models/gates/_gml_gates.py -> build/lib.linux-armv7l-3.9/flowkit/_models/gates 2021-07-29T17:30:05,573 copying flowkit/_models/gates/__init__.py -> build/lib.linux-armv7l-3.9/flowkit/_models/gates 2021-07-29T17:30:05,575 copying flowkit/_models/gates/_base_gate.py -> build/lib.linux-armv7l-3.9/flowkit/_models/gates 2021-07-29T17:30:05,579 creating build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,580 copying flowkit/_models/transforms/_base_transform.py -> build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,582 copying flowkit/_models/transforms/_wsp_transforms.py -> build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,585 copying flowkit/_models/transforms/_gml_transforms.py -> build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,588 copying flowkit/_models/transforms/__init__.py -> build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,590 copying flowkit/_models/transforms/_transforms.py -> build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,593 copying flowkit/_models/transforms/_matrix.py -> build/lib.linux-armv7l-3.9/flowkit/_models/transforms 2021-07-29T17:30:05,595 running egg_info 2021-07-29T17:30:05,611 writing FlowKit.egg-info/PKG-INFO 2021-07-29T17:30:05,613 writing dependency_links to FlowKit.egg-info/dependency_links.txt 2021-07-29T17:30:05,615 writing requirements to FlowKit.egg-info/requires.txt 2021-07-29T17:30:05,617 writing top-level names to FlowKit.egg-info/top_level.txt 2021-07-29T17:30:05,628 reading manifest file 'FlowKit.egg-info/SOURCES.txt' 2021-07-29T17:30:05,631 reading manifest template 'MANIFEST.in' 2021-07-29T17:30:05,655 adding license file 'LICENSE' 2021-07-29T17:30:05,660 writing manifest file 'FlowKit.egg-info/SOURCES.txt' 2021-07-29T17:30:05,668 creating build/lib.linux-armv7l-3.9/flowkit/utils_c_ext 2021-07-29T17:30:05,669 copying flowkit/utils_c_ext/_utils.c -> build/lib.linux-armv7l-3.9/flowkit/utils_c_ext 2021-07-29T17:30:05,672 copying flowkit/utils_c_ext/utils.c -> build/lib.linux-armv7l-3.9/flowkit/utils_c_ext 2021-07-29T17:30:05,675 copying flowkit/utils_c_ext/utils.h -> build/lib.linux-armv7l-3.9/flowkit/utils_c_ext 2021-07-29T17:30:05,677 copying flowkit/_resources/Gating-ML.v2.0.xsd -> build/lib.linux-armv7l-3.9/flowkit/_resources 2021-07-29T17:30:05,680 copying flowkit/_resources/Transformations.v2.0.xsd -> build/lib.linux-armv7l-3.9/flowkit/_resources 2021-07-29T17:30:05,683 copying flowkit/_resources/DataTypes.v2.0.xsd -> build/lib.linux-armv7l-3.9/flowkit/_resources 2021-07-29T17:30:05,692 running build_ext 2021-07-29T17:30:05,698 building 'flowkit._utils_c' extension 2021-07-29T17:30:05,699 creating build/temp.linux-armv7l-3.9 2021-07-29T17:30:05,700 creating build/temp.linux-armv7l-3.9/flowkit 2021-07-29T17:30:05,701 creating build/temp.linux-armv7l-3.9/flowkit/utils_c_ext 2021-07-29T17:30:05,702 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Iflowkit/utils_c_ext -I/usr/include/python3.9 -c flowkit/utils_c_ext/_utils.c -o build/temp.linux-armv7l-3.9/flowkit/utils_c_ext/_utils.o -std=c99 2021-07-29T17:30:06,363 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-29T17:30:06,363 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-29T17:30:06,363 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-29T17:30:06,364 from flowkit/utils_c_ext/_utils.c:2: 2021-07-29T17:30:06,364 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-29T17:30:06,364 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-29T17:30:06,364 | ^~~~~~~ 2021-07-29T17:30:06,394 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-29T17:30:06,394 from flowkit/utils_c_ext/_utils.c:2: 2021-07-29T17:30:06,394 flowkit/utils_c_ext/_utils.c: In function ‘wrap_points_in_polygon’: 2021-07-29T17:30:06,394 flowkit/utils_c_ext/_utils.c:54:41: warning: passing argument 3 of ‘(PyObject * (*)(PyTypeObject *, int, const npy_intp *, int, const npy_intp *, void *, int, int, PyObject *))*(PyArray_API + 372)’ from incompatible pointer type [-Wincompatible-pointer-types] 2021-07-29T17:30:06,395 54 | return PyArray_SimpleNewFromData(1, dims, NPY_INT32, is_in_polygon); 2021-07-29T17:30:06,395 | ^~~~ 2021-07-29T17:30:06,395 | | 2021-07-29T17:30:06,395 | long int * 2021-07-29T17:30:06,395 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:121:40: note: in definition of macro ‘PyArray_SimpleNewFromData’ 2021-07-29T17:30:06,396 121 | PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, \ 2021-07-29T17:30:06,396 | ^~~~ 2021-07-29T17:30:06,396 flowkit/utils_c_ext/_utils.c:54:41: note: expected ‘const npy_intp *’ {aka ‘const int *’} but argument is of type ‘long int *’ 2021-07-29T17:30:06,397 54 | return PyArray_SimpleNewFromData(1, dims, NPY_INT32, is_in_polygon); 2021-07-29T17:30:06,398 | ^~~~ 2021-07-29T17:30:06,398 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:121:40: note: in definition of macro ‘PyArray_SimpleNewFromData’ 2021-07-29T17:30:06,399 121 | PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, \ 2021-07-29T17:30:06,399 | ^~~~ 2021-07-29T17:30:06,561 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Iflowkit/utils_c_ext -I/usr/include/python3.9 -c flowkit/utils_c_ext/utils.c -o build/temp.linux-armv7l-3.9/flowkit/utils_c_ext/utils.o -std=c99 2021-07-29T17:30:06,742 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/flowkit/utils_c_ext/_utils.o build/temp.linux-armv7l-3.9/flowkit/utils_c_ext/utils.o -o build/lib.linux-armv7l-3.9/flowkit/_utils_c.cpython-39-arm-linux-gnueabihf.so 2021-07-29T17:30:06,864 installing to build/bdist.linux-armv7l/wheel 2021-07-29T17:30:06,865 running install 2021-07-29T17:30:06,866 running install_lib 2021-07-29T17:30:06,870 creating build/bdist.linux-armv7l 2021-07-29T17:30:06,870 creating build/bdist.linux-armv7l/wheel 2021-07-29T17:30:06,873 creating build/bdist.linux-armv7l/wheel/flowkit 2021-07-29T17:30:06,874 creating build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,876 copying build/lib.linux-armv7l-3.9/flowkit/_models/dimension.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,879 creating build/bdist.linux-armv7l/wheel/flowkit/_models/gates 2021-07-29T17:30:06,879 copying build/lib.linux-armv7l-3.9/flowkit/_models/gates/_wsp_gates.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/gates 2021-07-29T17:30:06,882 copying build/lib.linux-armv7l-3.9/flowkit/_models/gates/_gates.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/gates 2021-07-29T17:30:06,885 copying build/lib.linux-armv7l-3.9/flowkit/_models/gates/_gml_gates.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/gates 2021-07-29T17:30:06,887 copying build/lib.linux-armv7l-3.9/flowkit/_models/gates/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/gates 2021-07-29T17:30:06,889 copying build/lib.linux-armv7l-3.9/flowkit/_models/gates/_base_gate.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/gates 2021-07-29T17:30:06,891 copying build/lib.linux-armv7l-3.9/flowkit/_models/session.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,894 copying build/lib.linux-armv7l-3.9/flowkit/_models/vertex.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,897 copying build/lib.linux-armv7l-3.9/flowkit/_models/gating_strategy.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,899 copying build/lib.linux-armv7l-3.9/flowkit/_models/gating_results.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,902 copying build/lib.linux-armv7l-3.9/flowkit/_models/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,904 copying build/lib.linux-armv7l-3.9/flowkit/_models/sample.py -> build/bdist.linux-armv7l/wheel/flowkit/_models 2021-07-29T17:30:06,908 creating build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,909 copying build/lib.linux-armv7l-3.9/flowkit/_models/transforms/_base_transform.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,911 copying build/lib.linux-armv7l-3.9/flowkit/_models/transforms/_wsp_transforms.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,914 copying build/lib.linux-armv7l-3.9/flowkit/_models/transforms/_gml_transforms.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,917 copying build/lib.linux-armv7l-3.9/flowkit/_models/transforms/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,919 copying build/lib.linux-armv7l-3.9/flowkit/_models/transforms/_transforms.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,922 copying build/lib.linux-armv7l-3.9/flowkit/_models/transforms/_matrix.py -> build/bdist.linux-armv7l/wheel/flowkit/_models/transforms 2021-07-29T17:30:06,924 creating build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,925 copying build/lib.linux-armv7l-3.9/flowkit/tests/transform_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,928 copying build/lib.linux-armv7l-3.9/flowkit/tests/plot_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,930 copying build/lib.linux-armv7l-3.9/flowkit/tests/gating_strategy_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,932 copying build/lib.linux-armv7l-3.9/flowkit/tests/session_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,935 copying build/lib.linux-armv7l-3.9/flowkit/tests/sample_utils_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,937 copying build/lib.linux-armv7l-3.9/flowkit/tests/flowjo_wsp_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,940 copying build/lib.linux-armv7l-3.9/flowkit/tests/gating_strategy_prog_gate_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,943 copying build/lib.linux-armv7l-3.9/flowkit/tests/matrix_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,945 copying build/lib.linux-armv7l-3.9/flowkit/tests/gatingml_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,949 copying build/lib.linux-armv7l-3.9/flowkit/tests/export_gml_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,952 copying build/lib.linux-armv7l-3.9/flowkit/tests/string_repr_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,954 copying build/lib.linux-armv7l-3.9/flowkit/tests/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,956 copying build/lib.linux-armv7l-3.9/flowkit/tests/sample_tests.py -> build/bdist.linux-armv7l/wheel/flowkit/tests 2021-07-29T17:30:06,959 copying build/lib.linux-armv7l-3.9/flowkit/_utils_c.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flowkit 2021-07-29T17:30:06,963 creating build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,964 copying build/lib.linux-armv7l-3.9/flowkit/_utils/plot_utils.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,967 copying build/lib.linux-armv7l-3.9/flowkit/_utils/qc_utils.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,970 copying build/lib.linux-armv7l-3.9/flowkit/_utils/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,972 copying build/lib.linux-armv7l-3.9/flowkit/_utils/xml_utils.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,975 copying build/lib.linux-armv7l-3.9/flowkit/_utils/gate_utils.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,977 copying build/lib.linux-armv7l-3.9/flowkit/_utils/sample_utils.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,979 copying build/lib.linux-armv7l-3.9/flowkit/_utils/wsp_utils.py -> build/bdist.linux-armv7l/wheel/flowkit/_utils 2021-07-29T17:30:06,984 creating build/bdist.linux-armv7l/wheel/flowkit/_resources 2021-07-29T17:30:06,984 copying build/lib.linux-armv7l-3.9/flowkit/_resources/Gating-ML.v2.0.xsd -> build/bdist.linux-armv7l/wheel/flowkit/_resources 2021-07-29T17:30:06,987 copying build/lib.linux-armv7l-3.9/flowkit/_resources/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit/_resources 2021-07-29T17:30:06,989 copying build/lib.linux-armv7l-3.9/flowkit/_resources/Transformations.v2.0.xsd -> build/bdist.linux-armv7l/wheel/flowkit/_resources 2021-07-29T17:30:06,992 copying build/lib.linux-armv7l-3.9/flowkit/_resources/DataTypes.v2.0.xsd -> build/bdist.linux-armv7l/wheel/flowkit/_resources 2021-07-29T17:30:06,995 copying build/lib.linux-armv7l-3.9/flowkit/__init__.py -> build/bdist.linux-armv7l/wheel/flowkit 2021-07-29T17:30:06,997 creating build/bdist.linux-armv7l/wheel/flowkit/utils_c_ext 2021-07-29T17:30:06,998 copying build/lib.linux-armv7l-3.9/flowkit/utils_c_ext/utils.c -> build/bdist.linux-armv7l/wheel/flowkit/utils_c_ext 2021-07-29T17:30:07,001 copying build/lib.linux-armv7l-3.9/flowkit/utils_c_ext/_utils.c -> build/bdist.linux-armv7l/wheel/flowkit/utils_c_ext 2021-07-29T17:30:07,003 copying build/lib.linux-armv7l-3.9/flowkit/utils_c_ext/utils.h -> build/bdist.linux-armv7l/wheel/flowkit/utils_c_ext 2021-07-29T17:30:07,004 running install_egg_info 2021-07-29T17:30:07,016 Copying FlowKit.egg-info to build/bdist.linux-armv7l/wheel/FlowKit-0.6.0-py3.9.egg-info 2021-07-29T17:30:07,028 running install_scripts 2021-07-29T17:30:07,135 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-07-29T17:30:07,140 creating build/bdist.linux-armv7l/wheel/FlowKit-0.6.0.dist-info/WHEEL 2021-07-29T17:30:07,142 creating '/tmp/pip-wheel-6zir4r89/FlowKit-0.6.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-29T17:30:07,146 adding 'flowkit/__init__.py' 2021-07-29T17:30:07,153 adding 'flowkit/_utils_c.cpython-39-arm-linux-gnueabihf.so' 2021-07-29T17:30:07,155 adding 'flowkit/_models/__init__.py' 2021-07-29T17:30:07,157 adding 'flowkit/_models/dimension.py' 2021-07-29T17:30:07,158 adding 'flowkit/_models/gating_results.py' 2021-07-29T17:30:07,161 adding 'flowkit/_models/gating_strategy.py' 2021-07-29T17:30:07,166 adding 'flowkit/_models/sample.py' 2021-07-29T17:30:07,171 adding 'flowkit/_models/session.py' 2021-07-29T17:30:07,173 adding 'flowkit/_models/vertex.py' 2021-07-29T17:30:07,174 adding 'flowkit/_models/gates/__init__.py' 2021-07-29T17:30:07,176 adding 'flowkit/_models/gates/_base_gate.py' 2021-07-29T17:30:07,179 adding 'flowkit/_models/gates/_gates.py' 2021-07-29T17:30:07,181 adding 'flowkit/_models/gates/_gml_gates.py' 2021-07-29T17:30:07,182 adding 'flowkit/_models/gates/_wsp_gates.py' 2021-07-29T17:30:07,184 adding 'flowkit/_models/transforms/__init__.py' 2021-07-29T17:30:07,185 adding 'flowkit/_models/transforms/_base_transform.py' 2021-07-29T17:30:07,187 adding 'flowkit/_models/transforms/_gml_transforms.py' 2021-07-29T17:30:07,188 adding 'flowkit/_models/transforms/_matrix.py' 2021-07-29T17:30:07,190 adding 'flowkit/_models/transforms/_transforms.py' 2021-07-29T17:30:07,191 adding 'flowkit/_models/transforms/_wsp_transforms.py' 2021-07-29T17:30:07,194 adding 'flowkit/_resources/DataTypes.v2.0.xsd' 2021-07-29T17:30:07,195 adding 'flowkit/_resources/Gating-ML.v2.0.xsd' 2021-07-29T17:30:07,197 adding 'flowkit/_resources/Transformations.v2.0.xsd' 2021-07-29T17:30:07,198 adding 'flowkit/_resources/__init__.py' 2021-07-29T17:30:07,200 adding 'flowkit/_utils/__init__.py' 2021-07-29T17:30:07,201 adding 'flowkit/_utils/gate_utils.py' 2021-07-29T17:30:07,203 adding 'flowkit/_utils/plot_utils.py' 2021-07-29T17:30:07,205 adding 'flowkit/_utils/qc_utils.py' 2021-07-29T17:30:07,206 adding 'flowkit/_utils/sample_utils.py' 2021-07-29T17:30:07,212 adding 'flowkit/_utils/wsp_utils.py' 2021-07-29T17:30:07,215 adding 'flowkit/_utils/xml_utils.py' 2021-07-29T17:30:07,218 adding 'flowkit/tests/__init__.py' 2021-07-29T17:30:07,220 adding 'flowkit/tests/export_gml_tests.py' 2021-07-29T17:30:07,222 adding 'flowkit/tests/flowjo_wsp_tests.py' 2021-07-29T17:30:07,225 adding 'flowkit/tests/gating_strategy_prog_gate_tests.py' 2021-07-29T17:30:07,227 adding 'flowkit/tests/gating_strategy_tests.py' 2021-07-29T17:30:07,229 adding 'flowkit/tests/gatingml_tests.py' 2021-07-29T17:30:07,231 adding 'flowkit/tests/matrix_tests.py' 2021-07-29T17:30:07,232 adding 'flowkit/tests/plot_tests.py' 2021-07-29T17:30:07,234 adding 'flowkit/tests/sample_tests.py' 2021-07-29T17:30:07,236 adding 'flowkit/tests/sample_utils_tests.py' 2021-07-29T17:30:07,237 adding 'flowkit/tests/session_tests.py' 2021-07-29T17:30:07,239 adding 'flowkit/tests/string_repr_tests.py' 2021-07-29T17:30:07,240 adding 'flowkit/tests/transform_tests.py' 2021-07-29T17:30:07,242 adding 'flowkit/utils_c_ext/_utils.c' 2021-07-29T17:30:07,243 adding 'flowkit/utils_c_ext/utils.c' 2021-07-29T17:30:07,244 adding 'flowkit/utils_c_ext/utils.h' 2021-07-29T17:30:07,246 adding 'FlowKit-0.6.0.dist-info/LICENSE' 2021-07-29T17:30:07,247 adding 'FlowKit-0.6.0.dist-info/METADATA' 2021-07-29T17:30:07,248 adding 'FlowKit-0.6.0.dist-info/WHEEL' 2021-07-29T17:30:07,249 adding 'FlowKit-0.6.0.dist-info/top_level.txt' 2021-07-29T17:30:07,250 adding 'FlowKit-0.6.0.dist-info/RECORD' 2021-07-29T17:30:07,254 removing build/bdist.linux-armv7l/wheel 2021-07-29T17:30:07,390 Building wheel for flowkit (setup.py): finished with status 'done' 2021-07-29T17:30:07,394 Created wheel for flowkit: filename=FlowKit-0.6.0-cp39-cp39-linux_armv7l.whl size=120548 sha256=8ca853f7e5ed8c4b5d8b7a4267a2e8e8bcd17c2d1a6b03c10961c2fc050128c6 2021-07-29T17:30:07,394 Stored in directory: /tmp/pip-ephem-wheel-cache-arfxykj7/wheels/09/19/b0/ab93354411e214be3e5e4913c29362de76eab8cd0230552213 2021-07-29T17:30:07,405 Successfully built flowkit 2021-07-29T17:30:07,412 Removed build tracker: '/tmp/pip-req-tracker-uyr61xsw'