2021-07-29T20:27:00,555 Created temporary directory: /tmp/pip-ephem-wheel-cache-w2lai5oj 2021-07-29T20:27:00,558 Created temporary directory: /tmp/pip-req-tracker-jwsg6hvo 2021-07-29T20:27:00,559 Initialized build tracking at /tmp/pip-req-tracker-jwsg6hvo 2021-07-29T20:27:00,559 Created build tracker: /tmp/pip-req-tracker-jwsg6hvo 2021-07-29T20:27:00,559 Entered build tracker: /tmp/pip-req-tracker-jwsg6hvo 2021-07-29T20:27:00,560 Created temporary directory: /tmp/pip-wheel-czwhv_h2 2021-07-29T20:27:00,592 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-29T20:27:00,592 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-29T20:27:00,593 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-29T20:27:00,593 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-29T20:27:00,593 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-29T20:27:00,596 WARNING: Location '/bgzip/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T20:27:00,596 WARNING: Location 't/bgzip/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T20:27:00,597 WARNING: Location 'm/bgzip/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T20:27:00,597 WARNING: Location 'p/bgzip/' is ignored: it is either a non-existing path or lacks a specific scheme. 2021-07-29T20:27:00,597 1 location(s) to search for versions of bgzip: 2021-07-29T20:27:00,597 * https://pypi.org/simple/bgzip/ 2021-07-29T20:27:00,598 Fetching project page and analyzing links: https://pypi.org/simple/bgzip/ 2021-07-29T20:27:00,598 Getting page https://pypi.org/simple/bgzip/ 2021-07-29T20:27:00,599 Found index url https://pypi.org/simple 2021-07-29T20:27:00,790 Found link https://files.pythonhosted.org/packages/16/31/5c44418ae4c692f06634c350ac515915abbf26988dc36c3db0ad5bef7dc8/bgzip-0.0.2.tar.gz#sha256=8a4231aee7de57a9611d615761ea14a7a562b0321494c0c6910a49ee7d1c3e17 (from https://pypi.org/simple/bgzip/), version: 0.0.2 2021-07-29T20:27:00,790 Found link https://files.pythonhosted.org/packages/89/07/61299e64d9085fad3e42d21f0417639c80b0997046ad50e62f1394abace5/bgzip-0.1.0.tar.gz#sha256=3d5358392d99b163206cc34c3a81e7ef4734993842e5fe012323d1ca353f13a6 (from https://pypi.org/simple/bgzip/), version: 0.1.0 2021-07-29T20:27:00,790 Found link https://files.pythonhosted.org/packages/4f/11/5eb47568e6fd93b37c4c4e1dadd4d2b0586bf3ca49961ea278ed1d3e25ec/bgzip-0.2.0.tar.gz#sha256=ed18b10123ed2c222db3156bad953f28f4d0eb01203267be6db070644fd08c7a (from https://pypi.org/simple/bgzip/), version: 0.2.0 2021-07-29T20:27:00,791 Found link https://files.pythonhosted.org/packages/d1/47/fc15119cb529a00191390ee3946ccc0d51063892da41d52e57b011438e14/bgzip-0.2.1.tar.gz#sha256=972aa66f11829acb92b31c42e9d9d45c81504f78357aa19d54a354009104bba9 (from https://pypi.org/simple/bgzip/), version: 0.2.1 2021-07-29T20:27:00,791 Found link https://files.pythonhosted.org/packages/dd/65/f69f3a3eef5ffd9e8e1159f3ad95d1391e77ecdeeeb4b9b7256e16cf838f/bgzip-0.2.2.tar.gz#sha256=30eecc85b797225e1a842dbfe901931a532c5533b4a144584c85f72288ddb385 (from https://pypi.org/simple/bgzip/), version: 0.2.2 2021-07-29T20:27:00,791 Found link https://files.pythonhosted.org/packages/60/8f/7178c73a962a9dce2901d9b4f0063579418a1ce9197be517a0576a03f73d/bgzip-0.3.0.tar.gz#sha256=7e45a6cfab8d860af3d7f3a3df36d27e0aa0724f1a5eb9b44464b9408e2ba19b (from https://pypi.org/simple/bgzip/), version: 0.3.0 2021-07-29T20:27:00,792 Found link https://files.pythonhosted.org/packages/76/1e/e83f1af0bbbb4332e08a6c1b513ea003c008868c08fbcf2d80757c1e48c5/bgzip-0.3.1.tar.gz#sha256=ecd93a1ae51209d45d20695d1de19faed2bc82dff8adddd39007fffa2b74831c (from https://pypi.org/simple/bgzip/), version: 0.3.1 2021-07-29T20:27:00,792 Found link https://files.pythonhosted.org/packages/8a/31/697e749ca86468a79309ec21093506be15f8645f81fe0341f43aa2a85249/bgzip-0.3.2.tar.gz#sha256=067a774070e87b433e8c3c41822b44cec1e8f4ab0959e0e682ccd3cc51c1a592 (from https://pypi.org/simple/bgzip/), version: 0.3.2 2021-07-29T20:27:00,792 Found link https://files.pythonhosted.org/packages/48/1f/f4b3e60ca8a62a30fdddf920e80c003175d4419867ce5b4aadb79efbc970/bgzip-0.3.3.tar.gz#sha256=0284a7da2963f835bf8af4a69492b232da23825ccd134635f3c71c0762a902c7 (from https://pypi.org/simple/bgzip/), version: 0.3.3 2021-07-29T20:27:00,792 Found link https://files.pythonhosted.org/packages/33/0c/2cd70a1170e6093e1e259f96ae3aa98721e670f3deea885c0114e928162b/bgzip-0.3.4.tar.gz#sha256=11b3e4028f196c88f59833fcca3f3bf805c46434771005eab9d6abf129258bc2 (from https://pypi.org/simple/bgzip/), version: 0.3.4 2021-07-29T20:27:00,793 Found link https://files.pythonhosted.org/packages/0d/9e/d6f1c105cca14a7544e3d0465bc0a6566f65ef24fb9fa3d7a39ca3040215/bgzip-0.3.5.tar.gz#sha256=00cdb175f6c2e379a04898c89858492b5db3df4f9d6a285e7068e882c8128ef8 (from https://pypi.org/simple/bgzip/), version: 0.3.5 2021-07-29T20:27:00,793 Found link https://files.pythonhosted.org/packages/28/fd/9c693ecdcfb16f9a0384feffa12423643ce25bf359007c830aaf94af0404/bgzip-0.4.0.tar.gz#sha256=2562202a99b0cff1777d051cd3ed7ffa9a568ff8486f922935808e1a0478f01c (from https://pypi.org/simple/bgzip/), version: 0.4.0 2021-07-29T20:27:00,793 Skipping link: not a file: https://pypi.org/simple/bgzip/ 2021-07-29T20:27:00,812 Given no hashes to check 1 links for project 'bgzip': discarding no candidates 2021-07-29T20:27:00,830 Collecting bgzip==0.4.0 2021-07-29T20:27:00,832 Created temporary directory: /tmp/pip-unpack-evgvyzq_ 2021-07-29T20:27:01,043 Downloading bgzip-0.4.0.tar.gz (62 kB) 2021-07-29T20:27:01,123 Added bgzip==0.4.0 from https://files.pythonhosted.org/packages/28/fd/9c693ecdcfb16f9a0384feffa12423643ce25bf359007c830aaf94af0404/bgzip-0.4.0.tar.gz#sha256=2562202a99b0cff1777d051cd3ed7ffa9a568ff8486f922935808e1a0478f01c to build tracker '/tmp/pip-req-tracker-jwsg6hvo' 2021-07-29T20:27:01,124 Running setup.py (path:/tmp/pip-wheel-czwhv_h2/bgzip_033128b25e5e4422817334deb0b57d14/setup.py) egg_info for package bgzip 2021-07-29T20:27:01,125 Created temporary directory: /tmp/pip-pip-egg-info-wq2m8ghh 2021-07-29T20:27:01,126 Running command python setup.py egg_info 2021-07-29T20:27:01,891 running egg_info 2021-07-29T20:27:01,894 creating /tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info 2021-07-29T20:27:01,895 writing /tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info/PKG-INFO 2021-07-29T20:27:01,898 writing dependency_links to /tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info/dependency_links.txt 2021-07-29T20:27:01,900 writing top-level names to /tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info/top_level.txt 2021-07-29T20:27:01,902 writing manifest file '/tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info/SOURCES.txt' 2021-07-29T20:27:02,264 reading manifest file '/tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info/SOURCES.txt' 2021-07-29T20:27:02,266 reading manifest template 'MANIFEST.in' 2021-07-29T20:27:02,271 writing manifest file '/tmp/pip-pip-egg-info-wq2m8ghh/bgzip.egg-info/SOURCES.txt' 2021-07-29T20:27:02,349 Source in /tmp/pip-wheel-czwhv_h2/bgzip_033128b25e5e4422817334deb0b57d14 has version 0.4.0, which satisfies requirement bgzip==0.4.0 from https://files.pythonhosted.org/packages/28/fd/9c693ecdcfb16f9a0384feffa12423643ce25bf359007c830aaf94af0404/bgzip-0.4.0.tar.gz#sha256=2562202a99b0cff1777d051cd3ed7ffa9a568ff8486f922935808e1a0478f01c 2021-07-29T20:27:02,350 Removed bgzip==0.4.0 from https://files.pythonhosted.org/packages/28/fd/9c693ecdcfb16f9a0384feffa12423643ce25bf359007c830aaf94af0404/bgzip-0.4.0.tar.gz#sha256=2562202a99b0cff1777d051cd3ed7ffa9a568ff8486f922935808e1a0478f01c from build tracker '/tmp/pip-req-tracker-jwsg6hvo' 2021-07-29T20:27:02,354 Created temporary directory: /tmp/pip-unpack-i75fpvf_ 2021-07-29T20:27:02,355 Building wheels for collected packages: bgzip 2021-07-29T20:27:02,359 Created temporary directory: /tmp/pip-wheel-m7ikc56z 2021-07-29T20:27:02,360 Building wheel for bgzip (setup.py): started 2021-07-29T20:27:02,360 Destination directory: /tmp/pip-wheel-m7ikc56z 2021-07-29T20:27:02,360 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-czwhv_h2/bgzip_033128b25e5e4422817334deb0b57d14/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-czwhv_h2/bgzip_033128b25e5e4422817334deb0b57d14/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-m7ikc56z 2021-07-29T20:27:03,158 running bdist_wheel 2021-07-29T20:27:03,316 running build 2021-07-29T20:27:03,316 running build_py 2021-07-29T20:27:03,456 creating build 2021-07-29T20:27:03,456 creating build/lib.linux-armv7l-3.9 2021-07-29T20:27:03,457 creating build/lib.linux-armv7l-3.9/bgzip 2021-07-29T20:27:03,458 copying bgzip/__init__.py -> build/lib.linux-armv7l-3.9/bgzip 2021-07-29T20:27:03,461 copying bgzip/version.py -> build/lib.linux-armv7l-3.9/bgzip 2021-07-29T20:27:03,463 running build_ext 2021-07-29T20:27:03,468 building 'bgzip.bgzip_utils' extension 2021-07-29T20:27:03,468 creating build/temp.linux-armv7l-3.9 2021-07-29T20:27:03,469 creating build/temp.linux-armv7l-3.9/bgzip_utils 2021-07-29T20:27:03,469 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c bgzip_utils/bgzip_utils.c -o build/temp.linux-armv7l-3.9/bgzip_utils/bgzip_utils.o -O3 -fopenmp 2021-07-29T20:27:03,929 bgzip_utils/bgzip_utils.c: In function ‘__Pyx_InitGlobals’: 2021-07-29T20:27:03,931 bgzip_utils/bgzip_utils.c:5948:1: warning: ‘PyEval_InitThreads’ is deprecated [-Wdeprecated-declarations] 2021-07-29T20:27:03,932 5948 | PyEval_InitThreads(); 2021-07-29T20:27:03,932 | ^~~~~~~~~~~~~~~~~~ 2021-07-29T20:27:03,932 In file included from /usr/include/python3.9/Python.h:145, 2021-07-29T20:27:03,932 from bgzip_utils/bgzip_utils.c:6: 2021-07-29T20:27:03,932 /usr/include/python3.9/ceval.h:130:37: note: declared here 2021-07-29T20:27:03,932 130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void); 2021-07-29T20:27:03,932 | ^~~~~~~~~~~~~~~~~~ 2021-07-29T20:27:09,771 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/bgzip_utils/bgzip_utils.o -lz -o build/lib.linux-armv7l-3.9/bgzip/bgzip_utils.cpython-39-arm-linux-gnueabihf.so -fopenmp 2021-07-29T20:27:09,923 installing to build/bdist.linux-armv7l/wheel 2021-07-29T20:27:09,923 running install 2021-07-29T20:27:09,925 running install_lib 2021-07-29T20:27:09,929 creating build/bdist.linux-armv7l 2021-07-29T20:27:09,930 creating build/bdist.linux-armv7l/wheel 2021-07-29T20:27:09,931 creating build/bdist.linux-armv7l/wheel/bgzip 2021-07-29T20:27:09,933 copying build/lib.linux-armv7l-3.9/bgzip/__init__.py -> build/bdist.linux-armv7l/wheel/bgzip 2021-07-29T20:27:09,935 copying build/lib.linux-armv7l-3.9/bgzip/bgzip_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/bgzip 2021-07-29T20:27:09,949 copying build/lib.linux-armv7l-3.9/bgzip/version.py -> build/bdist.linux-armv7l/wheel/bgzip 2021-07-29T20:27:09,951 running install_egg_info 2021-07-29T20:27:09,972 running egg_info 2021-07-29T20:27:09,973 writing bgzip.egg-info/PKG-INFO 2021-07-29T20:27:09,975 writing dependency_links to bgzip.egg-info/dependency_links.txt 2021-07-29T20:27:09,977 writing top-level names to bgzip.egg-info/top_level.txt 2021-07-29T20:27:09,982 reading manifest file 'bgzip.egg-info/SOURCES.txt' 2021-07-29T20:27:09,984 reading manifest template 'MANIFEST.in' 2021-07-29T20:27:09,989 writing manifest file 'bgzip.egg-info/SOURCES.txt' 2021-07-29T20:27:09,990 Copying bgzip.egg-info to build/bdist.linux-armv7l/wheel/bgzip-0.4.0-py3.9.egg-info 2021-07-29T20:27:10,002 running install_scripts 2021-07-29T20:27:10,079 creating build/bdist.linux-armv7l/wheel/bgzip-0.4.0.dist-info/WHEEL 2021-07-29T20:27:10,082 creating '/tmp/pip-wheel-m7ikc56z/bgzip-0.4.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-29T20:27:10,086 adding 'bgzip/__init__.py' 2021-07-29T20:27:10,173 adding 'bgzip/bgzip_utils.cpython-39-arm-linux-gnueabihf.so' 2021-07-29T20:27:10,177 adding 'bgzip/version.py' 2021-07-29T20:27:10,180 adding 'bgzip-0.4.0.dist-info/METADATA' 2021-07-29T20:27:10,181 adding 'bgzip-0.4.0.dist-info/WHEEL' 2021-07-29T20:27:10,182 adding 'bgzip-0.4.0.dist-info/top_level.txt' 2021-07-29T20:27:10,182 adding 'bgzip-0.4.0.dist-info/RECORD' 2021-07-29T20:27:10,227 removing build/bdist.linux-armv7l/wheel 2021-07-29T20:27:10,328 Building wheel for bgzip (setup.py): finished with status 'done' 2021-07-29T20:27:10,334 Created wheel for bgzip: filename=bgzip-0.4.0-cp39-cp39-linux_armv7l.whl size=153639 sha256=a0594e3a18b486a6727e5170a2af454a7a4a9c414a3444af7b61bca9320a2da5 2021-07-29T20:27:10,335 Stored in directory: /tmp/pip-ephem-wheel-cache-w2lai5oj/wheels/00/d6/d1/e11cf5eed703fe321802825c9a4fbbdf4545c25d9a3aff5828 2021-07-29T20:27:10,343 Successfully built bgzip 2021-07-29T20:27:10,353 Removed build tracker: '/tmp/pip-req-tracker-jwsg6hvo'