2021-07-30T00:18:02,613 Created temporary directory: /tmp/pip-ephem-wheel-cache-kadwzzqk
2021-07-30T00:18:02,615 Created temporary directory: /tmp/pip-req-tracker-2japbhen
2021-07-30T00:18:02,616 Initialized build tracking at /tmp/pip-req-tracker-2japbhen
2021-07-30T00:18:02,616 Created build tracker: /tmp/pip-req-tracker-2japbhen
2021-07-30T00:18:02,616 Entered build tracker: /tmp/pip-req-tracker-2japbhen
2021-07-30T00:18:02,617 Created temporary directory: /tmp/pip-wheel-3cz5v4xs
2021-07-30T00:18:02,648 WARNING: The index url "/" seems invalid, please provide a scheme.
2021-07-30T00:18:02,648 WARNING: The index url "t" seems invalid, please provide a scheme.
2021-07-30T00:18:02,648 WARNING: The index url "m" seems invalid, please provide a scheme.
2021-07-30T00:18:02,649 WARNING: The index url "p" seems invalid, please provide a scheme.
2021-07-30T00:18:02,649 Looking in indexes: https://pypi.org/simple, /, t, m, p
2021-07-30T00:18:02,651 WARNING: Location '/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:18:02,652 WARNING: Location 't/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:18:02,652 WARNING: Location 'm/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:18:02,653 WARNING: Location 'p/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:18:02,653 1 location(s) to search for versions of jcvi:
2021-07-30T00:18:02,653 * https://pypi.org/simple/jcvi/
2021-07-30T00:18:02,653 Fetching project page and analyzing links: https://pypi.org/simple/jcvi/
2021-07-30T00:18:02,654 Getting page https://pypi.org/simple/jcvi/
2021-07-30T00:18:02,655 Found index url https://pypi.org/simple
2021-07-30T00:18:02,862   Found link https://files.pythonhosted.org/packages/9a/4f/c53e7eb012d5a42fca39fa8669a7d58f14673abbbe328b8c7e775cbf92cb/jcvi-0.4.7.tar.gz#sha256=9181ce8cf9768c1829f72c542aa801ba7d21f218e50c0776da5e1d110479d96d (from https://pypi.org/simple/jcvi/), version: 0.4.7
2021-07-30T00:18:02,863   Found link https://files.pythonhosted.org/packages/4a/9d/a6b537b0be8725d94c92546c4ba8de4d6fb97df654d7c12b6fe000049491/jcvi-0.4.8.tar.gz#sha256=8465dc624ecbb82c89ee6872ce6779634b877443ffe836124ef307cf76c6378a (from https://pypi.org/simple/jcvi/), version: 0.4.8
2021-07-30T00:18:02,863   Found link https://files.pythonhosted.org/packages/ac/53/ef3eaa2c0473a0553c6b5f2446885b3af401e53174e33d682d82e15d3795/jcvi-0.4.9.tar.gz#sha256=10a4d30f2148aa580e8e672a5aaba10e153a578b35e951ec69f2b4b679d90420 (from https://pypi.org/simple/jcvi/), version: 0.4.9
2021-07-30T00:18:02,863   Found link https://files.pythonhosted.org/packages/73/2f/d2b36ea11caca5b0edce0786aa6cc09b3b42beacebb8adee3f6db905093d/jcvi-0.4.10.tar.gz#sha256=654d0f3a2c099f9d81a4dc64af62a7d0f2e63b642b9af526bd1ef74687853418 (from https://pypi.org/simple/jcvi/), version: 0.4.10
2021-07-30T00:18:02,864   Found link https://files.pythonhosted.org/packages/0d/79/f86d87cb9f3a987a497a022422ec858d2788988f42067f773f3ca078c089/jcvi-0.4.12.tar.gz#sha256=93425f1fae03c8df20d71b3d5ceb3e8a24d979d5204b77823da54f50aeca05c4 (from https://pypi.org/simple/jcvi/), version: 0.4.12
2021-07-30T00:18:02,864   Found link https://files.pythonhosted.org/packages/95/68/96c4e56778504252a4a498c1b2f50561b73938812dd4e280a931bb3d1ecc/jcvi-0.5.1.tar.gz#sha256=2adb070783a773889a88e55724d823b0856ab490523f0a12b6d3a235fd6bac4c (from https://pypi.org/simple/jcvi/), version: 0.5.1
2021-07-30T00:18:02,864   Found link https://files.pythonhosted.org/packages/2e/58/a0e6ee654d1fbed322ab5756fe964a8a52f52850520eec0baffe6d120afc/jcvi-0.5.2.tar.gz#sha256=51a90442bb5ee9dc4a15b84816489477e593ff4c65925ab5d08ed1b8d672b984 (from https://pypi.org/simple/jcvi/), version: 0.5.2
2021-07-30T00:18:02,865   Found link https://files.pythonhosted.org/packages/21/d6/2f7d7a1ed2df03a36839a7556a663bfdc96755dc60907faa67ad03af0730/jcvi-0.5.3.tar.gz#sha256=589cc5edc564b3b6019a86422dfcb2cd44c4f59606bcf1ce310b5911d15ba21c (from https://pypi.org/simple/jcvi/), version: 0.5.3
2021-07-30T00:18:02,865   Found link https://files.pythonhosted.org/packages/fb/a1/ae58b6664ceaf79e0aa367e371e5c76e0699c0b9d7baec999e3d3a2e7052/jcvi-0.5.5.tar.gz#sha256=82e55a04126695d7c88d0d2516fcff9c8e69272bb733ce05ff0c55173253bc20 (from https://pypi.org/simple/jcvi/), version: 0.5.5
2021-07-30T00:18:02,865   Found link https://files.pythonhosted.org/packages/f6/8a/d35b5b34516256b5e937318b5ef5582ca6e03d131826454c44289a84b7a0/jcvi-0.5.6.tar.gz#sha256=a65c2f058931ed09b9218c116840b3d20b59bc0708295f1cd596265885aa760f (from https://pypi.org/simple/jcvi/), version: 0.5.6
2021-07-30T00:18:02,866   Found link https://files.pythonhosted.org/packages/fd/d7/2739abb3779ccef74fd9f41062fa0a357b0434d3c261faa5bef044853292/jcvi-0.5.7.tar.gz#sha256=39e42dacd6bedeb4cb66d11198fc5eb67fef68ec19c0906f6ce9eae5f853b758 (from https://pypi.org/simple/jcvi/), version: 0.5.7
2021-07-30T00:18:02,866   Found link https://files.pythonhosted.org/packages/b5/e7/14df7241963f68cfef3fccd5b907c217f397cd90e83f73f4dfceedd9a4d2/jcvi-0.5.8.tar.gz#sha256=fbab5cb7b19f1c069386adb29c5e93e2422107b8fbf527fcb885f65d7559a6af (from https://pypi.org/simple/jcvi/), version: 0.5.8
2021-07-30T00:18:02,866   Found link https://files.pythonhosted.org/packages/6f/6b/65638dc603fa922672380f32d5d7e8b263cc4d0a5f2a166701b50e3a1d88/jcvi-0.5.9.tar.gz#sha256=0dd9d09881170008d4c7adaf0f8bbe2c762e353cfddc060786e5ac4b3328d9f4 (from https://pypi.org/simple/jcvi/), version: 0.5.9
2021-07-30T00:18:02,866   Found link https://files.pythonhosted.org/packages/4d/b2/77a3e0bba015cd3d3edb3bd4e7065b0090c0cf77560c24681464ab73042e/jcvi-0.6.1.tar.gz#sha256=4fb330c23d5c78c375ab7233c62c6392db439b97a9e1745912f547c8310660a9 (from https://pypi.org/simple/jcvi/), version: 0.6.1
2021-07-30T00:18:02,867   Found link https://files.pythonhosted.org/packages/3a/c3/b488edc6a7ef108636c86fd3673bcfa53a1dc5f4ad45c5c5652a29f32226/jcvi-0.6.2.tar.gz#sha256=12818ddaf7ebe1c583a3e2440b7569709370f043c54c544768affc4504a63dcd (from https://pypi.org/simple/jcvi/), version: 0.6.2
2021-07-30T00:18:02,867   Found link https://files.pythonhosted.org/packages/b1/d4/2d2d6f252243402231b000eb4d4850ed6303064f5586b00d69364c6ee60d/jcvi-0.6.6.tar.gz#sha256=720e6ffa0c846dfc3bae2560c24a8e39ed0709b0ab121c0b331cea99ae0e6d25 (from https://pypi.org/simple/jcvi/), version: 0.6.6
2021-07-30T00:18:02,867   Found link https://files.pythonhosted.org/packages/1f/0a/4d1328c1cb4244d445aad2d7009f25d1490bc6d557cc4863a4ac5c42bc62/jcvi-0.6.9.tar.gz#sha256=e8f953a834ece1a017ffb5a085c710c81ba6b3bcbc91aa794aa383abf903b5ce (from https://pypi.org/simple/jcvi/), version: 0.6.9
2021-07-30T00:18:02,867   Found link https://files.pythonhosted.org/packages/27/88/6b2048b283c8ee70456e5bc7be04251020fd9b3929df13b6850d16e78e45/jcvi-0.7.1.tar.gz#sha256=bf5bb92160bb1942b615013315404daf263da2f629b3bc141a7cb7f1dc211d3a (from https://pypi.org/simple/jcvi/), version: 0.7.1
2021-07-30T00:18:02,868   Found link https://files.pythonhosted.org/packages/c1/57/226e744b4ad8c43086b050a710cc13012fc07a881847d7cfc98f10c2a35c/jcvi-0.7.3.tar.gz#sha256=58490d9ebb986ca04e4c4bcebde55edafbf267163c15f87eb250b6b34f3866dd (from https://pypi.org/simple/jcvi/), version: 0.7.3
2021-07-30T00:18:02,868   Found link https://files.pythonhosted.org/packages/c4/f9/1bc024ccde1dec0e052c3c66496533aa2e12b271be82c605fa0ee50c1611/jcvi-0.7.4.tar.gz#sha256=4dfbc5bd46bbeef4a6b0da2198b522f8350aeb5fd2a368d16f7f8ba1226347b8 (from https://pypi.org/simple/jcvi/), version: 0.7.4
2021-07-30T00:18:02,868   Found link https://files.pythonhosted.org/packages/e9/dd/64edf8d5ff645b2b186030df11516cd90daef149b5a3b8658fbe52d3c804/jcvi-0.7.5.tar.gz#sha256=469186839a55f6ccb0930a812fb4166833d4977f80faf646934d8042321674b2 (from https://pypi.org/simple/jcvi/), version: 0.7.5
2021-07-30T00:18:02,869   Found link https://files.pythonhosted.org/packages/e2/4b/d87a95002dd277ffe9f221afc4163714e6fc81a1d6edbcf387603c579830/jcvi-0.7.6.tar.gz#sha256=7367ca817d33976a029c1eb30732ffd10077ce25789e3f666bd37bb855955090 (from https://pypi.org/simple/jcvi/), version: 0.7.6
2021-07-30T00:18:02,869   Found link https://files.pythonhosted.org/packages/e1/e7/60e9e2c221731f6c0305784ac952c431625bf7be41a39464a568f4e3b18c/jcvi-0.7.7.tar.gz#sha256=561b9800f17542b29867e71488ddbd5a8dec72e5d0024a742e5917bc36798e5f (from https://pypi.org/simple/jcvi/), version: 0.7.7
2021-07-30T00:18:02,869   Found link https://files.pythonhosted.org/packages/2f/4c/745403735f07d6f4f83d0779cbfe1b565a366c5caba854bff17970b7b524/jcvi-0.8.4.tar.gz#sha256=d326ef550fa56b45190b3f5de7c2917af9d64ace8d22592cd65ceafad10b5280 (from https://pypi.org/simple/jcvi/), version: 0.8.4
2021-07-30T00:18:02,869   Found link https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d (from https://pypi.org/simple/jcvi/), version: 0.8.12
2021-07-30T00:18:02,870   Found link https://files.pythonhosted.org/packages/80/0a/b8a9719ae0a6e42a8c3ff5156dd924001278516d2b78d243a1cfa6311c94/jcvi-0.9.6.tar.gz#sha256=eaaf422c97376c0f35b2c98c3413bbef03e925d4bf0becf492a2b4028912891e (from https://pypi.org/simple/jcvi/), version: 0.9.6
2021-07-30T00:18:02,870   Found link https://files.pythonhosted.org/packages/48/9b/0c05b8fc3e088eecea6450170681d486e8a3cde9f45a39ce62d636ae219f/jcvi-0.9.9.tar.gz#sha256=2100581bc91c94599471a22fc9401ea4b24d08186b90120ab022eda3c75ced0e (from https://pypi.org/simple/jcvi/), version: 0.9.9
2021-07-30T00:18:02,870   Found link https://files.pythonhosted.org/packages/d7/cb/84dfb1c26e0df77f01bad924c8dccc9f311951f13fa73e897b86293406e4/jcvi-0.9.10.tar.gz#sha256=1a28a16f14ed2f6e4df1a0720aa3a0aa5d7b7d855cb2ce55a65da4afb49ce721 (from https://pypi.org/simple/jcvi/), version: 0.9.10
2021-07-30T00:18:02,871   Found link https://files.pythonhosted.org/packages/f2/86/0f8df6719496e325af9c5373081b3f88e854ffdb128a1f412124011fbe23/jcvi-0.9.11.tar.gz#sha256=e7719014ebbd82107806adda6c784d73cd6ba5036289ccb2058800ad22bbad7a (from https://pypi.org/simple/jcvi/), version: 0.9.11
2021-07-30T00:18:02,871   Found link https://files.pythonhosted.org/packages/b4/fb/9aac88999c9eb01575ec8e0924df82b247b4df1e626bbc853caccff3e83e/jcvi-0.9.12.tar.gz#sha256=4ac2a5adc03c95826cf2f6359f181c7cccb8cdb6a3f02f6718b045d439a0254e (from https://pypi.org/simple/jcvi/), version: 0.9.12
2021-07-30T00:18:02,871   Found link https://files.pythonhosted.org/packages/f4/ec/5b12cd16bd7ece78e740974aa190b554e61c9ec817ecfbaf090efb715a31/jcvi-0.9.13.tar.gz#sha256=f333a091fae5d9e40c0ed7eb31064537f5e87fe4ef6c231977552938f61e7248 (from https://pypi.org/simple/jcvi/), version: 0.9.13
2021-07-30T00:18:02,871   Found link https://files.pythonhosted.org/packages/9b/4c/c454c7e965d28b1ef90b186be5502aee2460ecd242513ef7ca28ce4691e5/jcvi-0.9.14.tar.gz#sha256=90b7300ba979d41b443c0c6af6768a7bddee0ae2abd5a87a8bc90f044d75a9de (from https://pypi.org/simple/jcvi/), version: 0.9.14
2021-07-30T00:18:02,872   Found link https://files.pythonhosted.org/packages/b1/2a/6630b839be29f1d0ce2f6059ee0889eb8e65bee5c80216901f0edf3a7dd6/jcvi-1.0.1.tar.gz#sha256=2ea7b692b55485c53aba9dee58f0e218df841ea7b55454680c053ad8fee6e647 (from https://pypi.org/simple/jcvi/), version: 1.0.1
2021-07-30T00:18:02,872   Found link https://files.pythonhosted.org/packages/92/5c/f48edd25912dd836f721aba88e069567070583bea4c5e8f101d4a8d39c63/jcvi-1.0.2.tar.gz#sha256=76cb492f65c0d3766923ddbcbc0f074d32ac603428f5b34fc910fff4983ebfc9 (from https://pypi.org/simple/jcvi/), version: 1.0.2
2021-07-30T00:18:02,872   Found link https://files.pythonhosted.org/packages/bc/96/9cee88ea244fef540ca144a19c99e859102641861df833a075e3e5824aaf/jcvi-1.0.3.tar.gz#sha256=6115882020338d53058b2d35ccbc451f737cbe0205320742fc63c8c41b46d7df (from https://pypi.org/simple/jcvi/), version: 1.0.3
2021-07-30T00:18:02,873   Found link https://files.pythonhosted.org/packages/00/9a/f43fe374eb9e88c92c468fe7d834dc1a5cf7583f3c0d72646a237ea3bf74/jcvi-1.0.4.tar.gz#sha256=3d9298e43f78451f10bf731f88047da47fe8b23ba9c767b5f5158809d79295c8 (from https://pypi.org/simple/jcvi/), version: 1.0.4
2021-07-30T00:18:02,873   Found link https://files.pythonhosted.org/packages/57/a2/c4366a77f1ffacfe04a0b338c18a675d878728e89d4ef2b26ae5c15f00d3/jcvi-1.0.5.tar.gz#sha256=5dd0515541548cee07a0cbb26bec70cdea8d502fc365971c420f3b919ef3074b (from https://pypi.org/simple/jcvi/), version: 1.0.5
2021-07-30T00:18:02,873   Found link https://files.pythonhosted.org/packages/95/99/7dbf1fe691d207f09fb898775ee72afb5174253d09bf9a37978860d00b5a/jcvi-1.0.6.tar.gz#sha256=49565d9dfe7519ee58a365a2507162f1483943370a89dfdc357650bbc3540c25 (from https://pypi.org/simple/jcvi/), version: 1.0.6
2021-07-30T00:18:02,873   Found link https://files.pythonhosted.org/packages/b9/81/99c5b7456aa490483fe208753894196113656e9cc69af47b39d42bf218c9/jcvi-1.0.7.tar.gz#sha256=6387cb5ae5e8e566117cdc043f87894a0108066b7ce2ce640a885537943eb153 (from https://pypi.org/simple/jcvi/), version: 1.0.7
2021-07-30T00:18:02,874   Found link https://files.pythonhosted.org/packages/79/d2/d570003c0045ea92485ea9c5e8f0561d47bbf18ea8951fe31450ca8961ff/jcvi-1.0.8.tar.gz#sha256=64cf47d3bbcc54dabfa8e20bdae7693dba8de8bd67e6c9c70d3ff16f24cf279e (from https://pypi.org/simple/jcvi/), version: 1.0.8
2021-07-30T00:18:02,874   Found link https://files.pythonhosted.org/packages/97/6f/fb49e1603d4617f0a136f86a94e035be5cf1fe34b9ff59ddfc7e5fc5d04d/jcvi-1.0.9.tar.gz#sha256=b03f2385639b601f111c812872763fee6699aa8f2683431347520f5bf9155480 (from https://pypi.org/simple/jcvi/), version: 1.0.9
2021-07-30T00:18:02,874   Found link https://files.pythonhosted.org/packages/9d/ec/6c6329502b18bcaf244d19a66aab8df287ac99c7cbaa0c047a6c18844de8/jcvi-1.0.10.tar.gz#sha256=56881652b39662a54d32c2f6387e9c58e40a925ac326c9bf1b4ba929b5a86562 (from https://pypi.org/simple/jcvi/), version: 1.0.10
2021-07-30T00:18:02,875   Found link https://files.pythonhosted.org/packages/a4/a0/a9827217e298eefcf6a9e94e26f33512204f50954c6209b8eed418cbe9d7/jcvi-1.0.11.tar.gz#sha256=ced5c0f3c6b0356292aa24736cf9c7848da71dd27c8c9e1e8d7acb77bc620ae3 (from https://pypi.org/simple/jcvi/), version: 1.0.11
2021-07-30T00:18:02,875   Found link https://files.pythonhosted.org/packages/04/42/7b9185888061799c56365598139239d4a48d074dfd2d0ff46c85cc032542/jcvi-1.0.12.tar.gz#sha256=3e55598c6be75b991a76904efe002c9c10a970244f46b2443fe333f934d265fd (from https://pypi.org/simple/jcvi/), version: 1.0.12
2021-07-30T00:18:02,875   Found link https://files.pythonhosted.org/packages/2c/e3/587dd5ddba13f6eff78a78b85d0dc7d008b15e5e28d04fc4081cff9f2ca6/jcvi-1.0.13.tar.gz#sha256=659ada559937f5914113a7a60bdc41bd58ddeadf7c1db974e11271b526e8c963 (from https://pypi.org/simple/jcvi/), version: 1.0.13
2021-07-30T00:18:02,875   Found link https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14
2021-07-30T00:18:02,876   Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1
2021-07-30T00:18:02,876   Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2
2021-07-30T00:18:02,876   Found link https://files.pythonhosted.org/packages/f3/4d/90ec025ffba6064f62d2480deebee2096b1c581484f5deb807081f68b826/jcvi-1.1.3.tar.gz#sha256=bff23cbdfa634dd22beff778e7405d509414d3a98b7531397b03db3e0f7037e5 (from https://pypi.org/simple/jcvi/), version: 1.1.3
2021-07-30T00:18:02,876   Found link https://files.pythonhosted.org/packages/aa/77/af2e6dbb516a39b09f908e85b2e1f52c8003bcf822f59434b1241da7d057/jcvi-1.1.4.tar.gz#sha256=de96b414804a5a9884845cc5923e6772339ea86b3aae40d02841e59944ce1777 (from https://pypi.org/simple/jcvi/), version: 1.1.4
2021-07-30T00:18:02,877   Found link https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b (from https://pypi.org/simple/jcvi/), version: 1.1.5
2021-07-30T00:18:02,877   Found link https://files.pythonhosted.org/packages/31/b4/f7d533c9099a7be91b964685e2d86f1986e25c45c6ec7174528f95d4c732/jcvi-1.1.6.tar.gz#sha256=c3a54f22140e4e3962f3cb05a5d9c47952d48b67d0459bf499193828018255a3 (from https://pypi.org/simple/jcvi/), version: 1.1.6
2021-07-30T00:18:02,877   Found link https://files.pythonhosted.org/packages/01/be/3ae008ee2b3a53b46f8953bbaf1c5372b5faaf790ee7c5813201d50fbdaf/jcvi-1.1.7.tar.gz#sha256=2709f0e2420da0f9d5a5da581f8f19bd54d7bb9a9720f0d0e9141f30e84b5ab2 (from https://pypi.org/simple/jcvi/), version: 1.1.7
2021-07-30T00:18:02,877   Found link https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 (from https://pypi.org/simple/jcvi/), version: 1.1.8
2021-07-30T00:18:02,878   Found link https://files.pythonhosted.org/packages/f8/da/21a544f6e7177504462669d1d882703c9d189aa18acfe4fb7ae28f541b12/jcvi-1.1.9.tar.gz#sha256=9711e6c5dec2436a4f712385ee165051e6c60c07f2ab0e2984e1139874879c77 (from https://pypi.org/simple/jcvi/), version: 1.1.9
2021-07-30T00:18:02,878   Found link https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a (from https://pypi.org/simple/jcvi/), version: 1.1.10
2021-07-30T00:18:02,878   Found link https://files.pythonhosted.org/packages/5b/36/1ed66483a5d733d87bd77466e425ef557fa4e1aa8c779b0acf02a810f822/jcvi-1.1.11.tar.gz#sha256=871ea81abb709470fc2f86038372915211dfb211901a9faed0b84714783780e7 (from https://pypi.org/simple/jcvi/), version: 1.1.11
2021-07-30T00:18:02,879   Found link https://files.pythonhosted.org/packages/7e/5c/76e236becc18806e305a68068ab84eab0eeeb862fbcea38674a7775c72c5/jcvi-1.1.12.tar.gz#sha256=9c688816d2770300a137fe0cdb7c4cdbc0f94e9f96d849cf0c1465af4464f8fe (from https://pypi.org/simple/jcvi/), version: 1.1.12
2021-07-30T00:18:02,879   Found link https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d (from https://pypi.org/simple/jcvi/), version: 1.1.13
2021-07-30T00:18:02,879   Found link https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0 (from https://pypi.org/simple/jcvi/), version: 1.1.14
2021-07-30T00:18:02,879   Found link https://files.pythonhosted.org/packages/89/97/1497942bf5ec52ada7cee1ad1961eecbe87361494812c57c9fb7cf659834/jcvi-1.1.15.tar.gz#sha256=d22c72cd566f41ca8e9e47e30ca430ec03fe06cc62dd22a652e8e0257c3a3e90 (from https://pypi.org/simple/jcvi/), version: 1.1.15
2021-07-30T00:18:02,880   Found link https://files.pythonhosted.org/packages/c6/49/63254eb560d3df5dece01e116fa6533f04b18dd76f0b51d8b778c7143864/jcvi-1.1.16.tar.gz#sha256=3e05eccc3d98c496adecb53eae0bdef7da82c1f733b2b0b859123e99e5778170 (from https://pypi.org/simple/jcvi/), version: 1.1.16
2021-07-30T00:18:02,880   Found link https://files.pythonhosted.org/packages/95/94/db0f2759b6f1e6f6e4f7e66f8168b95c846a4ba233a6b71a1bc5352f4014/jcvi-1.1.17.tar.gz#sha256=e8bccf025ce08acdb89bb9f9b3017e38c6ed65f55785edd298338af8adfe3769 (from https://pypi.org/simple/jcvi/), version: 1.1.17
2021-07-30T00:18:02,880 Skipping link: not a file: https://pypi.org/simple/jcvi/
2021-07-30T00:18:02,906 Given no hashes to check 1 links for project 'jcvi': discarding no candidates
2021-07-30T00:18:02,925 Collecting jcvi==1.1.13
2021-07-30T00:18:02,926   Created temporary directory: /tmp/pip-unpack-f15fkmcm
2021-07-30T00:18:03,417   Downloading jcvi-1.1.13.tar.gz (799 kB)
2021-07-30T00:18:04,149   Added jcvi==1.1.13 from https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d to build tracker '/tmp/pip-req-tracker-2japbhen'
2021-07-30T00:18:04,150     Running setup.py (path:/tmp/pip-wheel-3cz5v4xs/jcvi_2419c0f42aa74515a295738290be4b03/setup.py) egg_info for package jcvi
2021-07-30T00:18:04,151     Created temporary directory: /tmp/pip-pip-egg-info-r9nvrhg_
2021-07-30T00:18:04,151     Running command python setup.py egg_info
2021-07-30T00:18:05,595     /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.1.13' to '1.1.13'
2021-07-30T00:18:05,596       warnings.warn(tmpl.format(**locals()))
2021-07-30T00:18:05,646     running egg_info
2021-07-30T00:18:05,649     creating /tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info
2021-07-30T00:18:05,649     writing /tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/PKG-INFO
2021-07-30T00:18:05,653     writing dependency_links to /tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/dependency_links.txt
2021-07-30T00:18:05,655     writing requirements to /tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/requires.txt
2021-07-30T00:18:05,656     writing top-level names to /tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/top_level.txt
2021-07-30T00:18:05,657     writing manifest file '/tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/SOURCES.txt'
2021-07-30T00:18:05,683     reading manifest file '/tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/SOURCES.txt'
2021-07-30T00:18:05,685     reading manifest template 'MANIFEST.in'
2021-07-30T00:18:05,688     adding license file 'LICENSE'
2021-07-30T00:18:05,696     writing manifest file '/tmp/pip-pip-egg-info-r9nvrhg_/jcvi.egg-info/SOURCES.txt'
2021-07-30T00:18:05,799   Source in /tmp/pip-wheel-3cz5v4xs/jcvi_2419c0f42aa74515a295738290be4b03 has version 1.1.13, which satisfies requirement jcvi==1.1.13 from https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d
2021-07-30T00:18:05,800   Removed jcvi==1.1.13 from https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d from build tracker '/tmp/pip-req-tracker-2japbhen'
2021-07-30T00:18:05,805 Created temporary directory: /tmp/pip-unpack-m50_8exa
2021-07-30T00:18:05,805 Building wheels for collected packages: jcvi
2021-07-30T00:18:05,810   Created temporary directory: /tmp/pip-wheel-f207r58d
2021-07-30T00:18:05,810   Building wheel for jcvi (setup.py): started
2021-07-30T00:18:05,811   Destination directory: /tmp/pip-wheel-f207r58d
2021-07-30T00:18:05,811   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-3cz5v4xs/jcvi_2419c0f42aa74515a295738290be4b03/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-3cz5v4xs/jcvi_2419c0f42aa74515a295738290be4b03/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-f207r58d
2021-07-30T00:18:07,261   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.1.13' to '1.1.13'
2021-07-30T00:18:07,261     warnings.warn(tmpl.format(**locals()))
2021-07-30T00:18:07,329   running bdist_wheel
2021-07-30T00:18:07,333   running build
2021-07-30T00:18:07,333   running build_py
2021-07-30T00:18:07,338   creating build
2021-07-30T00:18:07,339   creating build/lib.linux-armv7l-3.9
2021-07-30T00:18:07,339   creating build/lib.linux-armv7l-3.9/jcvi
2021-07-30T00:18:07,341   copying jcvi/_version.py -> build/lib.linux-armv7l-3.9/jcvi
2021-07-30T00:18:07,342   copying jcvi/__init__.py -> build/lib.linux-armv7l-3.9/jcvi
2021-07-30T00:18:07,346   creating build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,347   copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,350   copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,352   copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,354   copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,357   copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,359   copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,361   copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,363   copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,367   copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,369   copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,373   copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,377   copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,382   copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,384   copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,387   copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,389   copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,391   copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,394   copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,396   copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,399   copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,401   copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,403   copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,407   copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,410   copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,413   copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,418   copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,421   creating build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,422   copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,425   copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,427   copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,429   copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,432   copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,436   copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,438   copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,440   copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,441   copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,444   copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:18:07,448   creating build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,449   copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,452   copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,455   copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,457   copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,460   copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,462   copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,465   copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,467   copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,469   copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,473   copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,475   copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,478   copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,481   copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,483   copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,486   copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,489   copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,491   copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,493   copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,495   copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,498   copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,501   copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,503   copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,506   copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:18:07,509   creating build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,510   copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,513   copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,515   copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,518   copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,520   copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,523   copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,525   copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,528   copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,530   copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,532   copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,534   copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,536   copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:18:07,542   creating build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,542   copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,547   copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,549   copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,552   copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,555   copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,557   copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,559   copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,560   copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,563   copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,565   copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,568   copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,571   copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,573   copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,575   copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,577   copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,579   copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,581   copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,584   copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,587   copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,589   copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,590   copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,592   copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,594   copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,597   copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,600   copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,602   copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:18:07,606   creating build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,606   copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,609   copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,611   copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,613   copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,615   copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,617   copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,620   copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,622   copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,624   copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,627   copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,628   copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,630   copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:18:07,634   creating build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,635   copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,638   copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,641   copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,643   copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,648   copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,651   copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,655   copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,658   copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,661   copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,664   copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,666   copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,671   copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,674   copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,677   copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,679   copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,680   copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,682   copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,687   copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,689   copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,692   copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,694   copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,697   creating build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,698   copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,700   copying jcvi/utils/console.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,702   copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,704   copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,706   copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,709   copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,710   copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,712   copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,714   copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,716   copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,718   copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,719   copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,722   copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:18:07,725   creating build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,726   copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,728   copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,731   copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,733   copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,735   copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,736   copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,741   copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,744   copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,747   copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,750   copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,753   copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:18:07,756   creating build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,757   copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,760   copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,762   copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,764   copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,767   copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,769   copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,772   copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,776   copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,779   copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,781   copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,784   copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,785   copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,787   copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,789   copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,792   copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,794   copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,797   copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:18:07,799   creating build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,800   copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,801   running egg_info
2021-07-30T00:18:07,833   writing jcvi.egg-info/PKG-INFO
2021-07-30T00:18:07,835   writing dependency_links to jcvi.egg-info/dependency_links.txt
2021-07-30T00:18:07,837   writing requirements to jcvi.egg-info/requires.txt
2021-07-30T00:18:07,838   writing top-level names to jcvi.egg-info/top_level.txt
2021-07-30T00:18:07,857   reading manifest file 'jcvi.egg-info/SOURCES.txt'
2021-07-30T00:18:07,864   reading manifest template 'MANIFEST.in'
2021-07-30T00:18:07,867   adding license file 'LICENSE'
2021-07-30T00:18:07,878   writing manifest file 'jcvi.egg-info/SOURCES.txt'
2021-07-30T00:18:07,885   copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:07,887   copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:07,889   copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,892   copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,898   copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,902   copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,905   copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,908   copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,910   copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,912   copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,915   copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,917   copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,921   copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,923   copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:18:07,940   UPDATING build/lib.linux-armv7l-3.9/jcvi/_version.py
2021-07-30T00:18:07,941   set build/lib.linux-armv7l-3.9/jcvi/_version.py to 'v1.1.13'
2021-07-30T00:18:07,941   running build_ext
2021-07-30T00:18:08,000   cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c
2021-07-30T00:18:08,602   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-3cz5v4xs/jcvi_2419c0f42aa74515a295738290be4b03/jcvi/assembly/chic.pyx
2021-07-30T00:18:08,602     tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-30T00:18:11,481   cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c
2021-07-30T00:18:11,487   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-3cz5v4xs/jcvi_2419c0f42aa74515a295738290be4b03/jcvi/formats/cblast.pyx
2021-07-30T00:18:11,487     tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-30T00:18:12,434   building 'jcvi.assembly.chic' extension
2021-07-30T00:18:12,435   creating build/temp.linux-armv7l-3.9
2021-07-30T00:18:12,435   creating build/temp.linux-armv7l-3.9/jcvi
2021-07-30T00:18:12,436   creating build/temp.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:18:12,437   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.9/jcvi/assembly/chic.o -O3
2021-07-30T00:18:12,848   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-30T00:18:12,848                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-30T00:18:12,848                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-30T00:18:12,848                    from jcvi/assembly/chic.c:612:
2021-07-30T00:18:12,849   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-30T00:18:12,849      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-30T00:18:12,849         |  ^~~~~~~
2021-07-30T00:18:16,576   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so
2021-07-30T00:18:16,706   building 'jcvi.formats.cblast' extension
2021-07-30T00:18:16,707   creating build/temp.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:18:16,707   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.9/jcvi/formats/cblast.o -O3
2021-07-30T00:18:26,229   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so
2021-07-30T00:18:26,469   installing to build/bdist.linux-armv7l/wheel
2021-07-30T00:18:26,469   running install
2021-07-30T00:18:26,471   running install_lib
2021-07-30T00:18:26,487   creating build/bdist.linux-armv7l
2021-07-30T00:18:26,489   creating build/bdist.linux-armv7l/wheel
2021-07-30T00:18:26,499   creating build/bdist.linux-armv7l/wheel/jcvi
2021-07-30T00:18:26,502   creating build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,504   copying build/lib.linux-armv7l-3.9/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,509   copying build/lib.linux-armv7l-3.9/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,513   copying build/lib.linux-armv7l-3.9/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,516   copying build/lib.linux-armv7l-3.9/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,519   copying build/lib.linux-armv7l-3.9/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,523   copying build/lib.linux-armv7l-3.9/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,525   copying build/lib.linux-armv7l-3.9/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,528   copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,547   copying build/lib.linux-armv7l-3.9/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,550   copying build/lib.linux-armv7l-3.9/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,552   copying build/lib.linux-armv7l-3.9/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,556   copying build/lib.linux-armv7l-3.9/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,560   copying build/lib.linux-armv7l-3.9/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,565   copying build/lib.linux-armv7l-3.9/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,567   copying build/lib.linux-armv7l-3.9/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,569   copying build/lib.linux-armv7l-3.9/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,571   copying build/lib.linux-armv7l-3.9/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,573   copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,576   copying build/lib.linux-armv7l-3.9/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,579   copying build/lib.linux-armv7l-3.9/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,581   copying build/lib.linux-armv7l-3.9/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,585   copying build/lib.linux-armv7l-3.9/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,586   copying build/lib.linux-armv7l-3.9/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,588   copying build/lib.linux-armv7l-3.9/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,593   copying build/lib.linux-armv7l-3.9/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,596   copying build/lib.linux-armv7l-3.9/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,599   copying build/lib.linux-armv7l-3.9/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,605   copying build/lib.linux-armv7l-3.9/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:18:26,608   creating build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,609   copying build/lib.linux-armv7l-3.9/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,613   copying build/lib.linux-armv7l-3.9/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,615   copying build/lib.linux-armv7l-3.9/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,618   copying build/lib.linux-armv7l-3.9/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,621   copying build/lib.linux-armv7l-3.9/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,625   copying build/lib.linux-armv7l-3.9/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,628   copying build/lib.linux-armv7l-3.9/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,630   copying build/lib.linux-armv7l-3.9/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,632   copying build/lib.linux-armv7l-3.9/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,635   copying build/lib.linux-armv7l-3.9/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:18:26,638   creating build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,639   copying build/lib.linux-armv7l-3.9/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,642   copying build/lib.linux-armv7l-3.9/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,645   copying build/lib.linux-armv7l-3.9/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,647   copying build/lib.linux-armv7l-3.9/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,651   copying build/lib.linux-armv7l-3.9/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,654   copying build/lib.linux-armv7l-3.9/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,656   copying build/lib.linux-armv7l-3.9/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,659   copying build/lib.linux-armv7l-3.9/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,662   copying build/lib.linux-armv7l-3.9/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,666   copying build/lib.linux-armv7l-3.9/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,668   copying build/lib.linux-armv7l-3.9/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,671   copying build/lib.linux-armv7l-3.9/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,675   copying build/lib.linux-armv7l-3.9/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,677   copying build/lib.linux-armv7l-3.9/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,680   copying build/lib.linux-armv7l-3.9/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,683   copying build/lib.linux-armv7l-3.9/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,686   copying build/lib.linux-armv7l-3.9/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,687   copying build/lib.linux-armv7l-3.9/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,689   copying build/lib.linux-armv7l-3.9/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,692   copying build/lib.linux-armv7l-3.9/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,695   copying build/lib.linux-armv7l-3.9/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,698   copying build/lib.linux-armv7l-3.9/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,700   copying build/lib.linux-armv7l-3.9/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:18:26,704   creating build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,705   copying build/lib.linux-armv7l-3.9/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,708   copying build/lib.linux-armv7l-3.9/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,711   copying build/lib.linux-armv7l-3.9/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,714   copying build/lib.linux-armv7l-3.9/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,717   copying build/lib.linux-armv7l-3.9/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,719   copying build/lib.linux-armv7l-3.9/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,722   copying build/lib.linux-armv7l-3.9/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,725   copying build/lib.linux-armv7l-3.9/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,728   copying build/lib.linux-armv7l-3.9/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,729   copying build/lib.linux-armv7l-3.9/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,731   copying build/lib.linux-armv7l-3.9/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,734   copying build/lib.linux-armv7l-3.9/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:18:26,739   creating build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,739   copying build/lib.linux-armv7l-3.9/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,744   copying build/lib.linux-armv7l-3.9/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,747   copying build/lib.linux-armv7l-3.9/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,750   copying build/lib.linux-armv7l-3.9/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,752   copying build/lib.linux-armv7l-3.9/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,754   copying build/lib.linux-armv7l-3.9/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,756   copying build/lib.linux-armv7l-3.9/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,758   copying build/lib.linux-armv7l-3.9/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,761   copying build/lib.linux-armv7l-3.9/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,763   copying build/lib.linux-armv7l-3.9/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,766   copying build/lib.linux-armv7l-3.9/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,769   copying build/lib.linux-armv7l-3.9/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,772   copying build/lib.linux-armv7l-3.9/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,774   copying build/lib.linux-armv7l-3.9/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,776   copying build/lib.linux-armv7l-3.9/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,779   copying build/lib.linux-armv7l-3.9/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,781   copying build/lib.linux-armv7l-3.9/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,784   copying build/lib.linux-armv7l-3.9/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,786   copying build/lib.linux-armv7l-3.9/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,788   copying build/lib.linux-armv7l-3.9/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,790   copying build/lib.linux-armv7l-3.9/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,792   copying build/lib.linux-armv7l-3.9/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,794   copying build/lib.linux-armv7l-3.9/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,797   copying build/lib.linux-armv7l-3.9/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,800   copying build/lib.linux-armv7l-3.9/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,802   copying build/lib.linux-armv7l-3.9/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:18:26,804   copying build/lib.linux-armv7l-3.9/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi
2021-07-30T00:18:26,807   creating build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,808   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,810   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,813   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,815   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,817   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,820   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,822   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,825   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,828   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,830   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,832   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,834   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:18:26,837   copying build/lib.linux-armv7l-3.9/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi
2021-07-30T00:18:26,840   creating build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,841   copying build/lib.linux-armv7l-3.9/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,843   copying build/lib.linux-armv7l-3.9/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,847   copying build/lib.linux-armv7l-3.9/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,850   copying build/lib.linux-armv7l-3.9/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,854   copying build/lib.linux-armv7l-3.9/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,857   copying build/lib.linux-armv7l-3.9/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,860   copying build/lib.linux-armv7l-3.9/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,863   copying build/lib.linux-armv7l-3.9/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,866   copying build/lib.linux-armv7l-3.9/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,869   copying build/lib.linux-armv7l-3.9/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,872   copying build/lib.linux-armv7l-3.9/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,875   copying build/lib.linux-armv7l-3.9/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,878   copying build/lib.linux-armv7l-3.9/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,882   copying build/lib.linux-armv7l-3.9/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,885   copying build/lib.linux-armv7l-3.9/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,887   copying build/lib.linux-armv7l-3.9/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,889   copying build/lib.linux-armv7l-3.9/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,895   copying build/lib.linux-armv7l-3.9/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,899   copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,907   copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,910   copying build/lib.linux-armv7l-3.9/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,913   copying build/lib.linux-armv7l-3.9/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,918   copying build/lib.linux-armv7l-3.9/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:18:26,927   creating build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,928   copying build/lib.linux-armv7l-3.9/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,931   copying build/lib.linux-armv7l-3.9/jcvi/utils/console.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,934   copying build/lib.linux-armv7l-3.9/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,937   copying build/lib.linux-armv7l-3.9/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,940   copying build/lib.linux-armv7l-3.9/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,944   copying build/lib.linux-armv7l-3.9/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,946   copying build/lib.linux-armv7l-3.9/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,949   copying build/lib.linux-armv7l-3.9/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,952   copying build/lib.linux-armv7l-3.9/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,954   copying build/lib.linux-armv7l-3.9/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,956   copying build/lib.linux-armv7l-3.9/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,957   copying build/lib.linux-armv7l-3.9/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,960   copying build/lib.linux-armv7l-3.9/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:18:26,964   creating build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,964   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,967   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,970   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,973   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,974   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,977   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,979   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,981   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,987   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,989   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,992   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,993   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:26,996   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:18:27,000   creating build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,001   copying build/lib.linux-armv7l-3.9/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,005   copying build/lib.linux-armv7l-3.9/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,007   copying build/lib.linux-armv7l-3.9/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,010   copying build/lib.linux-armv7l-3.9/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,012   copying build/lib.linux-armv7l-3.9/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,015   copying build/lib.linux-armv7l-3.9/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,019   copying build/lib.linux-armv7l-3.9/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,022   copying build/lib.linux-armv7l-3.9/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,025   copying build/lib.linux-armv7l-3.9/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,029   copying build/lib.linux-armv7l-3.9/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,033   copying build/lib.linux-armv7l-3.9/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:18:27,036   creating build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,038   copying build/lib.linux-armv7l-3.9/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,041   copying build/lib.linux-armv7l-3.9/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,044   copying build/lib.linux-armv7l-3.9/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,047   copying build/lib.linux-armv7l-3.9/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,050   copying build/lib.linux-armv7l-3.9/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,053   copying build/lib.linux-armv7l-3.9/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,057   copying build/lib.linux-armv7l-3.9/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,061   copying build/lib.linux-armv7l-3.9/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,065   copying build/lib.linux-armv7l-3.9/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,068   copying build/lib.linux-armv7l-3.9/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,071   copying build/lib.linux-armv7l-3.9/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,073   copying build/lib.linux-armv7l-3.9/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,076   copying build/lib.linux-armv7l-3.9/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,079   copying build/lib.linux-armv7l-3.9/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,082   copying build/lib.linux-armv7l-3.9/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,085   copying build/lib.linux-armv7l-3.9/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,088   copying build/lib.linux-armv7l-3.9/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:18:27,091   running install_egg_info
2021-07-30T00:18:27,101   Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.1.13-py3.9.egg-info
2021-07-30T00:18:27,117   running install_scripts
2021-07-30T00:18:27,185   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-30T00:18:27,189   creating build/bdist.linux-armv7l/wheel/jcvi-1.1.13.dist-info/WHEEL
2021-07-30T00:18:27,192   creating '/tmp/pip-wheel-f207r58d/jcvi-1.1.13-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-30T00:18:27,195   adding 'jcvi/__init__.py'
2021-07-30T00:18:27,197   adding 'jcvi/_version.py'
2021-07-30T00:18:27,199   adding 'jcvi/algorithms/__init__.py'
2021-07-30T00:18:27,201   adding 'jcvi/algorithms/__main__.py'
2021-07-30T00:18:27,203   adding 'jcvi/algorithms/ec.py'
2021-07-30T00:18:27,205   adding 'jcvi/algorithms/formula.py'
2021-07-30T00:18:27,208   adding 'jcvi/algorithms/graph.py'
2021-07-30T00:18:27,211   adding 'jcvi/algorithms/lis.py'
2021-07-30T00:18:27,215   adding 'jcvi/algorithms/lpsolve.py'
2021-07-30T00:18:27,217   adding 'jcvi/algorithms/matrix.py'
2021-07-30T00:18:27,219   adding 'jcvi/algorithms/maxsum.py'
2021-07-30T00:18:27,220   adding 'jcvi/algorithms/ml.py'
2021-07-30T00:18:27,222   adding 'jcvi/algorithms/supermap.py'
2021-07-30T00:18:27,225   adding 'jcvi/algorithms/tsp.py'
2021-07-30T00:18:27,227   adding 'jcvi/annotation/__init__.py'
2021-07-30T00:18:27,228   adding 'jcvi/annotation/__main__.py'
2021-07-30T00:18:27,231   adding 'jcvi/annotation/ahrd.py'
2021-07-30T00:18:27,234   adding 'jcvi/annotation/automaton.py'
2021-07-30T00:18:27,236   adding 'jcvi/annotation/depth.py'
2021-07-30T00:18:27,238   adding 'jcvi/annotation/evm.py'
2021-07-30T00:18:27,240   adding 'jcvi/annotation/maker.py'
2021-07-30T00:18:27,244   adding 'jcvi/annotation/pasa.py'
2021-07-30T00:18:27,246   adding 'jcvi/annotation/qc.py'
2021-07-30T00:18:27,253   adding 'jcvi/annotation/reformat.py'
2021-07-30T00:18:27,255   adding 'jcvi/annotation/stats.py'
2021-07-30T00:18:27,257   adding 'jcvi/annotation/train.py'
2021-07-30T00:18:27,260   adding 'jcvi/apps/__init__.py'
2021-07-30T00:18:27,261   adding 'jcvi/apps/__main__.py'
2021-07-30T00:18:27,264   adding 'jcvi/apps/align.py'
2021-07-30T00:18:27,274   adding 'jcvi/apps/base.py'
2021-07-30T00:18:27,277   adding 'jcvi/apps/biomart.py'
2021-07-30T00:18:27,279   adding 'jcvi/apps/blastplus.py'
2021-07-30T00:18:27,280   adding 'jcvi/apps/bowtie.py'
2021-07-30T00:18:27,283   adding 'jcvi/apps/bwa.py'
2021-07-30T00:18:27,285   adding 'jcvi/apps/cap3.py'
2021-07-30T00:18:27,287   adding 'jcvi/apps/cdhit.py'
2021-07-30T00:18:27,288   adding 'jcvi/apps/emboss.py'
2021-07-30T00:18:27,292   adding 'jcvi/apps/fetch.py'
2021-07-30T00:18:27,295   adding 'jcvi/apps/gbsubmit.py'
2021-07-30T00:18:27,297   adding 'jcvi/apps/gmap.py'
2021-07-30T00:18:27,300   adding 'jcvi/apps/grid.py'
2021-07-30T00:18:27,306   adding 'jcvi/apps/ks.py'
2021-07-30T00:18:27,308   adding 'jcvi/apps/lastz.py'
2021-07-30T00:18:27,310   adding 'jcvi/apps/mask.py'
2021-07-30T00:18:27,315   adding 'jcvi/apps/phylo.py'
2021-07-30T00:18:27,317   adding 'jcvi/apps/r.py'
2021-07-30T00:18:27,319   adding 'jcvi/apps/restriction.py'
2021-07-30T00:18:27,320   adding 'jcvi/apps/script.py'
2021-07-30T00:18:27,322   adding 'jcvi/apps/softlink.py'
2021-07-30T00:18:27,327   adding 'jcvi/apps/uclust.py'
2021-07-30T00:18:27,329   adding 'jcvi/apps/uniprot.py'
2021-07-30T00:18:27,331   adding 'jcvi/apps/vecscreen.py'
2021-07-30T00:18:27,333   adding 'jcvi/assembly/__init__.py'
2021-07-30T00:18:27,335   adding 'jcvi/assembly/__main__.py'
2021-07-30T00:18:27,345   adding 'jcvi/assembly/allmaps.py'
2021-07-30T00:18:27,348   adding 'jcvi/assembly/allpaths.py'
2021-07-30T00:18:27,351   adding 'jcvi/assembly/automaton.py'
2021-07-30T00:18:27,353   adding 'jcvi/assembly/base.py'
2021-07-30T00:18:27,358   adding 'jcvi/assembly/ca.py'
2021-07-30T00:18:27,405   adding 'jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so'
2021-07-30T00:18:27,409   adding 'jcvi/assembly/chic.pyx'
2021-07-30T00:18:27,412   adding 'jcvi/assembly/coverage.py'
2021-07-30T00:18:27,414   adding 'jcvi/assembly/gaps.py'
2021-07-30T00:18:27,417   adding 'jcvi/assembly/geneticmap.py'
2021-07-30T00:18:27,423   adding 'jcvi/assembly/goldenpath.py'
2021-07-30T00:18:27,432   adding 'jcvi/assembly/hic.py'
2021-07-30T00:18:27,438   adding 'jcvi/assembly/kmer.py'
2021-07-30T00:18:27,441   adding 'jcvi/assembly/opticalmap.py'
2021-07-30T00:18:27,445   adding 'jcvi/assembly/patch.py'
2021-07-30T00:18:27,448   adding 'jcvi/assembly/postprocess.py'
2021-07-30T00:18:27,452   adding 'jcvi/assembly/preprocess.py'
2021-07-30T00:18:27,458   adding 'jcvi/assembly/sim.py'
2021-07-30T00:18:27,460   adding 'jcvi/assembly/soap.py'
2021-07-30T00:18:27,463   adding 'jcvi/assembly/syntenypath.py'
2021-07-30T00:18:27,465   adding 'jcvi/assembly/trinity.py'
2021-07-30T00:18:27,468   adding 'jcvi/compara/__init__.py'
2021-07-30T00:18:27,469   adding 'jcvi/compara/__main__.py'
2021-07-30T00:18:27,472   adding 'jcvi/compara/blastfilter.py'
2021-07-30T00:18:27,476   adding 'jcvi/compara/catalog.py'
2021-07-30T00:18:27,481   adding 'jcvi/compara/fractionation.py'
2021-07-30T00:18:27,483   adding 'jcvi/compara/pad.py'
2021-07-30T00:18:27,485   adding 'jcvi/compara/phylogeny.py'
2021-07-30T00:18:27,488   adding 'jcvi/compara/quota.py'
2021-07-30T00:18:27,495   adding 'jcvi/compara/reconstruct.py'
2021-07-30T00:18:27,497   adding 'jcvi/compara/synfind.py'
2021-07-30T00:18:27,508   adding 'jcvi/compara/synteny.py'
2021-07-30T00:18:27,512   adding 'jcvi/formats/__init__.py'
2021-07-30T00:18:27,513   adding 'jcvi/formats/__main__.py'
2021-07-30T00:18:27,522   adding 'jcvi/formats/agp.py'
2021-07-30T00:18:27,529   adding 'jcvi/formats/base.py'
2021-07-30T00:18:27,542   adding 'jcvi/formats/bed.py'
2021-07-30T00:18:27,548   adding 'jcvi/formats/blast.py'
2021-07-30T00:18:27,683   adding 'jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so'
2021-07-30T00:18:27,690   adding 'jcvi/formats/cblast.pyx'
2021-07-30T00:18:27,692   adding 'jcvi/formats/cdt.py'
2021-07-30T00:18:27,693   adding 'jcvi/formats/chain.py'
2021-07-30T00:18:27,695   adding 'jcvi/formats/contig.py'
2021-07-30T00:18:27,697   adding 'jcvi/formats/coords.py'
2021-07-30T00:18:27,699   adding 'jcvi/formats/excel.py'
2021-07-30T00:18:27,709   adding 'jcvi/formats/fasta.py'
2021-07-30T00:18:27,714   adding 'jcvi/formats/fastq.py'
2021-07-30T00:18:27,716   adding 'jcvi/formats/genbank.py'
2021-07-30T00:18:27,731   adding 'jcvi/formats/gff.py'
2021-07-30T00:18:27,737   adding 'jcvi/formats/html.py'
2021-07-30T00:18:27,739   adding 'jcvi/formats/maf.py'
2021-07-30T00:18:27,742   adding 'jcvi/formats/obo.py'
2021-07-30T00:18:27,743   adding 'jcvi/formats/paf.py'
2021-07-30T00:18:27,745   adding 'jcvi/formats/pdf.py'
2021-07-30T00:18:27,747   adding 'jcvi/formats/psl.py'
2021-07-30T00:18:27,748   adding 'jcvi/formats/pyblast.py'
2021-07-30T00:18:27,753   adding 'jcvi/formats/sam.py'
2021-07-30T00:18:27,755   adding 'jcvi/formats/sbt.py'
2021-07-30T00:18:27,758   adding 'jcvi/formats/sizes.py'
2021-07-30T00:18:27,762   adding 'jcvi/formats/vcf.py'
2021-07-30T00:18:27,765   adding 'jcvi/graphics/__init__.py'
2021-07-30T00:18:27,767   adding 'jcvi/graphics/__main__.py'
2021-07-30T00:18:27,770   adding 'jcvi/graphics/align.py'
2021-07-30T00:18:27,773   adding 'jcvi/graphics/assembly.py'
2021-07-30T00:18:27,776   adding 'jcvi/graphics/base.py'
2021-07-30T00:18:27,779   adding 'jcvi/graphics/blastplot.py'
2021-07-30T00:18:27,783   adding 'jcvi/graphics/chromosome.py'
2021-07-30T00:18:27,785   adding 'jcvi/graphics/coverage.py'
2021-07-30T00:18:27,787   adding 'jcvi/graphics/dotplot.py'
2021-07-30T00:18:27,791   adding 'jcvi/graphics/glyph.py'
2021-07-30T00:18:27,795   adding 'jcvi/graphics/grabseeds.py'
2021-07-30T00:18:27,796   adding 'jcvi/graphics/graph.py'
2021-07-30T00:18:27,798   adding 'jcvi/graphics/heatmap.py'
2021-07-30T00:18:27,800   adding 'jcvi/graphics/histogram.py'
2021-07-30T00:18:27,802   adding 'jcvi/graphics/karyotype.py'
2021-07-30T00:18:27,807   adding 'jcvi/graphics/landscape.py'
2021-07-30T00:18:27,808   adding 'jcvi/graphics/logo.py'
2021-07-30T00:18:27,810   adding 'jcvi/graphics/mummerplot.py'
2021-07-30T00:18:27,813   adding 'jcvi/graphics/synteny.py'
2021-07-30T00:18:27,814   adding 'jcvi/graphics/table.py'
2021-07-30T00:18:27,817   adding 'jcvi/graphics/tree.py'
2021-07-30T00:18:27,819   adding 'jcvi/graphics/wheel.py'
2021-07-30T00:18:27,820   adding 'jcvi/graphics/whisker.py'
2021-07-30T00:18:27,822   adding 'jcvi/projects/__init__.py'
2021-07-30T00:18:27,824   adding 'jcvi/projects/__main__.py'
2021-07-30T00:18:27,826   adding 'jcvi/projects/age.py'
2021-07-30T00:18:27,828   adding 'jcvi/projects/alfalfa.py'
2021-07-30T00:18:27,830   adding 'jcvi/projects/allmaps.py'
2021-07-30T00:18:27,842   adding 'jcvi/projects/bites.py'
2021-07-30T00:18:27,844   adding 'jcvi/projects/heterosis.py'
2021-07-30T00:18:27,846   adding 'jcvi/projects/ies.py'
2021-07-30T00:18:27,850   adding 'jcvi/projects/misc.py'
2021-07-30T00:18:27,855   adding 'jcvi/projects/napus.py'
2021-07-30T00:18:27,859   adding 'jcvi/projects/pineapple.py'
2021-07-30T00:18:27,865   adding 'jcvi/projects/pistachio.py'
2021-07-30T00:18:27,876   adding 'jcvi/projects/str.py'
2021-07-30T00:18:28,096   adding 'jcvi/projects/sugarcane.py'
2021-07-30T00:18:28,103   adding 'jcvi/projects/synfind.py'
2021-07-30T00:18:28,110   adding 'jcvi/projects/tgbs.py'
2021-07-30T00:18:28,115   adding 'jcvi/projects/vanilla.py'
2021-07-30T00:18:28,118   adding 'jcvi/utils/__init__.py'
2021-07-30T00:18:28,119   adding 'jcvi/utils/__main__.py'
2021-07-30T00:18:28,122   adding 'jcvi/utils/aws.py'
2021-07-30T00:18:28,125   adding 'jcvi/utils/cbook.py'
2021-07-30T00:18:28,126   adding 'jcvi/utils/console.py'
2021-07-30T00:18:28,128   adding 'jcvi/utils/db.py'
2021-07-30T00:18:28,130   adding 'jcvi/utils/ez_setup.py'
2021-07-30T00:18:28,131   adding 'jcvi/utils/grouper.py'
2021-07-30T00:18:28,133   adding 'jcvi/utils/orderedcollections.py'
2021-07-30T00:18:28,135   adding 'jcvi/utils/range.py'
2021-07-30T00:18:28,137   adding 'jcvi/utils/table.py'
2021-07-30T00:18:28,139   adding 'jcvi/utils/taxonomy.py'
2021-07-30T00:18:28,140   adding 'jcvi/utils/webcolors.py'
2021-07-30T00:18:28,144   adding 'jcvi/utils/data/Airswing.ttf'
2021-07-30T00:18:28,161   adding 'jcvi/utils/data/Collegia.ttf'
2021-07-30T00:18:28,165   adding 'jcvi/utils/data/HookedUp.ttf'
2021-07-30T00:18:28,171   adding 'jcvi/utils/data/Humor-Sans.ttf'
2021-07-30T00:18:28,175   adding 'jcvi/utils/data/TREDs.meta.csv'
2021-07-30T00:18:28,177   adding 'jcvi/utils/data/__init__.py'
2021-07-30T00:18:28,178   adding 'jcvi/utils/data/adapters.fasta'
2021-07-30T00:18:28,179   adding 'jcvi/utils/data/blosum80.mat'
2021-07-30T00:18:28,181   adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc'
2021-07-30T00:18:28,183   adding 'jcvi/utils/data/colorchecker.txt'
2021-07-30T00:18:28,189   adding 'jcvi/utils/data/hg38.band.txt'
2021-07-30T00:18:28,192   adding 'jcvi/utils/data/hg38.chrom.sizes'
2021-07-30T00:18:28,193   adding 'jcvi/utils/data/instance.json'
2021-07-30T00:18:28,195   adding 'jcvi/variation/__init__.py'
2021-07-30T00:18:28,196   adding 'jcvi/variation/__main__.py'
2021-07-30T00:18:28,201   adding 'jcvi/variation/cnv.py'
2021-07-30T00:18:28,203   adding 'jcvi/variation/deconvolute.py'
2021-07-30T00:18:28,205   adding 'jcvi/variation/delly.py'
2021-07-30T00:18:28,207   adding 'jcvi/variation/impute.py'
2021-07-30T00:18:28,208   adding 'jcvi/variation/phase.py'
2021-07-30T00:18:28,210   adding 'jcvi/variation/snp.py'
2021-07-30T00:18:28,217   adding 'jcvi/variation/str.py'
2021-07-30T00:18:28,237   adding 'jcvi/variation/tassel.py'
2021-07-30T00:18:28,240   adding 'jcvi-1.1.13.dist-info/LICENSE'
2021-07-30T00:18:28,242   adding 'jcvi-1.1.13.dist-info/METADATA'
2021-07-30T00:18:28,243   adding 'jcvi-1.1.13.dist-info/WHEEL'
2021-07-30T00:18:28,244   adding 'jcvi-1.1.13.dist-info/top_level.txt'
2021-07-30T00:18:28,249   adding 'jcvi-1.1.13.dist-info/RECORD'
2021-07-30T00:18:28,279   removing build/bdist.linux-armv7l/wheel
2021-07-30T00:18:28,578   Building wheel for jcvi (setup.py): finished with status 'done'
2021-07-30T00:18:28,596   Created wheel for jcvi: filename=jcvi-1.1.13-cp39-cp39-linux_armv7l.whl size=1207290 sha256=4ed2e6d4a730a58c3a030ec220bbbb3f159c487361e4145c3c4551107c80a3d3
2021-07-30T00:18:28,597   Stored in directory: /tmp/pip-ephem-wheel-cache-kadwzzqk/wheels/1f/3d/e3/8d377d93d02bbcac6f9d649cbf049e078cc307190ea52073a0
2021-07-30T00:18:28,617 Successfully built jcvi
2021-07-30T00:18:28,664 Removed build tracker: '/tmp/pip-req-tracker-2japbhen'