2021-07-30T00:20:44,123 Created temporary directory: /tmp/pip-ephem-wheel-cache-ku6ervtf
2021-07-30T00:20:44,126 Created temporary directory: /tmp/pip-req-tracker-586xecc0
2021-07-30T00:20:44,127 Initialized build tracking at /tmp/pip-req-tracker-586xecc0
2021-07-30T00:20:44,127 Created build tracker: /tmp/pip-req-tracker-586xecc0
2021-07-30T00:20:44,127 Entered build tracker: /tmp/pip-req-tracker-586xecc0
2021-07-30T00:20:44,128 Created temporary directory: /tmp/pip-wheel-m109u6r6
2021-07-30T00:20:44,159 WARNING: The index url "/" seems invalid, please provide a scheme.
2021-07-30T00:20:44,160 WARNING: The index url "t" seems invalid, please provide a scheme.
2021-07-30T00:20:44,160 WARNING: The index url "m" seems invalid, please provide a scheme.
2021-07-30T00:20:44,160 WARNING: The index url "p" seems invalid, please provide a scheme.
2021-07-30T00:20:44,160 Looking in indexes: https://pypi.org/simple, /, t, m, p
2021-07-30T00:20:44,163 WARNING: Location '/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:20:44,164 WARNING: Location 't/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:20:44,164 WARNING: Location 'm/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:20:44,164 WARNING: Location 'p/jcvi/' is ignored: it is either a non-existing path or lacks a specific scheme.
2021-07-30T00:20:44,164 1 location(s) to search for versions of jcvi:
2021-07-30T00:20:44,164 * https://pypi.org/simple/jcvi/
2021-07-30T00:20:44,165 Fetching project page and analyzing links: https://pypi.org/simple/jcvi/
2021-07-30T00:20:44,165 Getting page https://pypi.org/simple/jcvi/
2021-07-30T00:20:44,167 Found index url https://pypi.org/simple
2021-07-30T00:20:44,281   Found link https://files.pythonhosted.org/packages/9a/4f/c53e7eb012d5a42fca39fa8669a7d58f14673abbbe328b8c7e775cbf92cb/jcvi-0.4.7.tar.gz#sha256=9181ce8cf9768c1829f72c542aa801ba7d21f218e50c0776da5e1d110479d96d (from https://pypi.org/simple/jcvi/), version: 0.4.7
2021-07-30T00:20:44,281   Found link https://files.pythonhosted.org/packages/4a/9d/a6b537b0be8725d94c92546c4ba8de4d6fb97df654d7c12b6fe000049491/jcvi-0.4.8.tar.gz#sha256=8465dc624ecbb82c89ee6872ce6779634b877443ffe836124ef307cf76c6378a (from https://pypi.org/simple/jcvi/), version: 0.4.8
2021-07-30T00:20:44,282   Found link https://files.pythonhosted.org/packages/ac/53/ef3eaa2c0473a0553c6b5f2446885b3af401e53174e33d682d82e15d3795/jcvi-0.4.9.tar.gz#sha256=10a4d30f2148aa580e8e672a5aaba10e153a578b35e951ec69f2b4b679d90420 (from https://pypi.org/simple/jcvi/), version: 0.4.9
2021-07-30T00:20:44,282   Found link https://files.pythonhosted.org/packages/73/2f/d2b36ea11caca5b0edce0786aa6cc09b3b42beacebb8adee3f6db905093d/jcvi-0.4.10.tar.gz#sha256=654d0f3a2c099f9d81a4dc64af62a7d0f2e63b642b9af526bd1ef74687853418 (from https://pypi.org/simple/jcvi/), version: 0.4.10
2021-07-30T00:20:44,282   Found link https://files.pythonhosted.org/packages/0d/79/f86d87cb9f3a987a497a022422ec858d2788988f42067f773f3ca078c089/jcvi-0.4.12.tar.gz#sha256=93425f1fae03c8df20d71b3d5ceb3e8a24d979d5204b77823da54f50aeca05c4 (from https://pypi.org/simple/jcvi/), version: 0.4.12
2021-07-30T00:20:44,283   Found link https://files.pythonhosted.org/packages/95/68/96c4e56778504252a4a498c1b2f50561b73938812dd4e280a931bb3d1ecc/jcvi-0.5.1.tar.gz#sha256=2adb070783a773889a88e55724d823b0856ab490523f0a12b6d3a235fd6bac4c (from https://pypi.org/simple/jcvi/), version: 0.5.1
2021-07-30T00:20:44,283   Found link https://files.pythonhosted.org/packages/2e/58/a0e6ee654d1fbed322ab5756fe964a8a52f52850520eec0baffe6d120afc/jcvi-0.5.2.tar.gz#sha256=51a90442bb5ee9dc4a15b84816489477e593ff4c65925ab5d08ed1b8d672b984 (from https://pypi.org/simple/jcvi/), version: 0.5.2
2021-07-30T00:20:44,283   Found link https://files.pythonhosted.org/packages/21/d6/2f7d7a1ed2df03a36839a7556a663bfdc96755dc60907faa67ad03af0730/jcvi-0.5.3.tar.gz#sha256=589cc5edc564b3b6019a86422dfcb2cd44c4f59606bcf1ce310b5911d15ba21c (from https://pypi.org/simple/jcvi/), version: 0.5.3
2021-07-30T00:20:44,284   Found link https://files.pythonhosted.org/packages/fb/a1/ae58b6664ceaf79e0aa367e371e5c76e0699c0b9d7baec999e3d3a2e7052/jcvi-0.5.5.tar.gz#sha256=82e55a04126695d7c88d0d2516fcff9c8e69272bb733ce05ff0c55173253bc20 (from https://pypi.org/simple/jcvi/), version: 0.5.5
2021-07-30T00:20:44,284   Found link https://files.pythonhosted.org/packages/f6/8a/d35b5b34516256b5e937318b5ef5582ca6e03d131826454c44289a84b7a0/jcvi-0.5.6.tar.gz#sha256=a65c2f058931ed09b9218c116840b3d20b59bc0708295f1cd596265885aa760f (from https://pypi.org/simple/jcvi/), version: 0.5.6
2021-07-30T00:20:44,284   Found link https://files.pythonhosted.org/packages/fd/d7/2739abb3779ccef74fd9f41062fa0a357b0434d3c261faa5bef044853292/jcvi-0.5.7.tar.gz#sha256=39e42dacd6bedeb4cb66d11198fc5eb67fef68ec19c0906f6ce9eae5f853b758 (from https://pypi.org/simple/jcvi/), version: 0.5.7
2021-07-30T00:20:44,284   Found link https://files.pythonhosted.org/packages/b5/e7/14df7241963f68cfef3fccd5b907c217f397cd90e83f73f4dfceedd9a4d2/jcvi-0.5.8.tar.gz#sha256=fbab5cb7b19f1c069386adb29c5e93e2422107b8fbf527fcb885f65d7559a6af (from https://pypi.org/simple/jcvi/), version: 0.5.8
2021-07-30T00:20:44,285   Found link https://files.pythonhosted.org/packages/6f/6b/65638dc603fa922672380f32d5d7e8b263cc4d0a5f2a166701b50e3a1d88/jcvi-0.5.9.tar.gz#sha256=0dd9d09881170008d4c7adaf0f8bbe2c762e353cfddc060786e5ac4b3328d9f4 (from https://pypi.org/simple/jcvi/), version: 0.5.9
2021-07-30T00:20:44,285   Found link https://files.pythonhosted.org/packages/4d/b2/77a3e0bba015cd3d3edb3bd4e7065b0090c0cf77560c24681464ab73042e/jcvi-0.6.1.tar.gz#sha256=4fb330c23d5c78c375ab7233c62c6392db439b97a9e1745912f547c8310660a9 (from https://pypi.org/simple/jcvi/), version: 0.6.1
2021-07-30T00:20:44,285   Found link https://files.pythonhosted.org/packages/3a/c3/b488edc6a7ef108636c86fd3673bcfa53a1dc5f4ad45c5c5652a29f32226/jcvi-0.6.2.tar.gz#sha256=12818ddaf7ebe1c583a3e2440b7569709370f043c54c544768affc4504a63dcd (from https://pypi.org/simple/jcvi/), version: 0.6.2
2021-07-30T00:20:44,285   Found link https://files.pythonhosted.org/packages/b1/d4/2d2d6f252243402231b000eb4d4850ed6303064f5586b00d69364c6ee60d/jcvi-0.6.6.tar.gz#sha256=720e6ffa0c846dfc3bae2560c24a8e39ed0709b0ab121c0b331cea99ae0e6d25 (from https://pypi.org/simple/jcvi/), version: 0.6.6
2021-07-30T00:20:44,286   Found link https://files.pythonhosted.org/packages/1f/0a/4d1328c1cb4244d445aad2d7009f25d1490bc6d557cc4863a4ac5c42bc62/jcvi-0.6.9.tar.gz#sha256=e8f953a834ece1a017ffb5a085c710c81ba6b3bcbc91aa794aa383abf903b5ce (from https://pypi.org/simple/jcvi/), version: 0.6.9
2021-07-30T00:20:44,286   Found link https://files.pythonhosted.org/packages/27/88/6b2048b283c8ee70456e5bc7be04251020fd9b3929df13b6850d16e78e45/jcvi-0.7.1.tar.gz#sha256=bf5bb92160bb1942b615013315404daf263da2f629b3bc141a7cb7f1dc211d3a (from https://pypi.org/simple/jcvi/), version: 0.7.1
2021-07-30T00:20:44,286   Found link https://files.pythonhosted.org/packages/c1/57/226e744b4ad8c43086b050a710cc13012fc07a881847d7cfc98f10c2a35c/jcvi-0.7.3.tar.gz#sha256=58490d9ebb986ca04e4c4bcebde55edafbf267163c15f87eb250b6b34f3866dd (from https://pypi.org/simple/jcvi/), version: 0.7.3
2021-07-30T00:20:44,287   Found link https://files.pythonhosted.org/packages/c4/f9/1bc024ccde1dec0e052c3c66496533aa2e12b271be82c605fa0ee50c1611/jcvi-0.7.4.tar.gz#sha256=4dfbc5bd46bbeef4a6b0da2198b522f8350aeb5fd2a368d16f7f8ba1226347b8 (from https://pypi.org/simple/jcvi/), version: 0.7.4
2021-07-30T00:20:44,287   Found link https://files.pythonhosted.org/packages/e9/dd/64edf8d5ff645b2b186030df11516cd90daef149b5a3b8658fbe52d3c804/jcvi-0.7.5.tar.gz#sha256=469186839a55f6ccb0930a812fb4166833d4977f80faf646934d8042321674b2 (from https://pypi.org/simple/jcvi/), version: 0.7.5
2021-07-30T00:20:44,287   Found link https://files.pythonhosted.org/packages/e2/4b/d87a95002dd277ffe9f221afc4163714e6fc81a1d6edbcf387603c579830/jcvi-0.7.6.tar.gz#sha256=7367ca817d33976a029c1eb30732ffd10077ce25789e3f666bd37bb855955090 (from https://pypi.org/simple/jcvi/), version: 0.7.6
2021-07-30T00:20:44,287   Found link https://files.pythonhosted.org/packages/e1/e7/60e9e2c221731f6c0305784ac952c431625bf7be41a39464a568f4e3b18c/jcvi-0.7.7.tar.gz#sha256=561b9800f17542b29867e71488ddbd5a8dec72e5d0024a742e5917bc36798e5f (from https://pypi.org/simple/jcvi/), version: 0.7.7
2021-07-30T00:20:44,288   Found link https://files.pythonhosted.org/packages/2f/4c/745403735f07d6f4f83d0779cbfe1b565a366c5caba854bff17970b7b524/jcvi-0.8.4.tar.gz#sha256=d326ef550fa56b45190b3f5de7c2917af9d64ace8d22592cd65ceafad10b5280 (from https://pypi.org/simple/jcvi/), version: 0.8.4
2021-07-30T00:20:44,288   Found link https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d (from https://pypi.org/simple/jcvi/), version: 0.8.12
2021-07-30T00:20:44,288   Found link https://files.pythonhosted.org/packages/80/0a/b8a9719ae0a6e42a8c3ff5156dd924001278516d2b78d243a1cfa6311c94/jcvi-0.9.6.tar.gz#sha256=eaaf422c97376c0f35b2c98c3413bbef03e925d4bf0becf492a2b4028912891e (from https://pypi.org/simple/jcvi/), version: 0.9.6
2021-07-30T00:20:44,288   Found link https://files.pythonhosted.org/packages/48/9b/0c05b8fc3e088eecea6450170681d486e8a3cde9f45a39ce62d636ae219f/jcvi-0.9.9.tar.gz#sha256=2100581bc91c94599471a22fc9401ea4b24d08186b90120ab022eda3c75ced0e (from https://pypi.org/simple/jcvi/), version: 0.9.9
2021-07-30T00:20:44,289   Found link https://files.pythonhosted.org/packages/d7/cb/84dfb1c26e0df77f01bad924c8dccc9f311951f13fa73e897b86293406e4/jcvi-0.9.10.tar.gz#sha256=1a28a16f14ed2f6e4df1a0720aa3a0aa5d7b7d855cb2ce55a65da4afb49ce721 (from https://pypi.org/simple/jcvi/), version: 0.9.10
2021-07-30T00:20:44,289   Found link https://files.pythonhosted.org/packages/f2/86/0f8df6719496e325af9c5373081b3f88e854ffdb128a1f412124011fbe23/jcvi-0.9.11.tar.gz#sha256=e7719014ebbd82107806adda6c784d73cd6ba5036289ccb2058800ad22bbad7a (from https://pypi.org/simple/jcvi/), version: 0.9.11
2021-07-30T00:20:44,289   Found link https://files.pythonhosted.org/packages/b4/fb/9aac88999c9eb01575ec8e0924df82b247b4df1e626bbc853caccff3e83e/jcvi-0.9.12.tar.gz#sha256=4ac2a5adc03c95826cf2f6359f181c7cccb8cdb6a3f02f6718b045d439a0254e (from https://pypi.org/simple/jcvi/), version: 0.9.12
2021-07-30T00:20:44,289   Found link https://files.pythonhosted.org/packages/f4/ec/5b12cd16bd7ece78e740974aa190b554e61c9ec817ecfbaf090efb715a31/jcvi-0.9.13.tar.gz#sha256=f333a091fae5d9e40c0ed7eb31064537f5e87fe4ef6c231977552938f61e7248 (from https://pypi.org/simple/jcvi/), version: 0.9.13
2021-07-30T00:20:44,290   Found link https://files.pythonhosted.org/packages/9b/4c/c454c7e965d28b1ef90b186be5502aee2460ecd242513ef7ca28ce4691e5/jcvi-0.9.14.tar.gz#sha256=90b7300ba979d41b443c0c6af6768a7bddee0ae2abd5a87a8bc90f044d75a9de (from https://pypi.org/simple/jcvi/), version: 0.9.14
2021-07-30T00:20:44,290   Found link https://files.pythonhosted.org/packages/b1/2a/6630b839be29f1d0ce2f6059ee0889eb8e65bee5c80216901f0edf3a7dd6/jcvi-1.0.1.tar.gz#sha256=2ea7b692b55485c53aba9dee58f0e218df841ea7b55454680c053ad8fee6e647 (from https://pypi.org/simple/jcvi/), version: 1.0.1
2021-07-30T00:20:44,290   Found link https://files.pythonhosted.org/packages/92/5c/f48edd25912dd836f721aba88e069567070583bea4c5e8f101d4a8d39c63/jcvi-1.0.2.tar.gz#sha256=76cb492f65c0d3766923ddbcbc0f074d32ac603428f5b34fc910fff4983ebfc9 (from https://pypi.org/simple/jcvi/), version: 1.0.2
2021-07-30T00:20:44,290   Found link https://files.pythonhosted.org/packages/bc/96/9cee88ea244fef540ca144a19c99e859102641861df833a075e3e5824aaf/jcvi-1.0.3.tar.gz#sha256=6115882020338d53058b2d35ccbc451f737cbe0205320742fc63c8c41b46d7df (from https://pypi.org/simple/jcvi/), version: 1.0.3
2021-07-30T00:20:44,291   Found link https://files.pythonhosted.org/packages/00/9a/f43fe374eb9e88c92c468fe7d834dc1a5cf7583f3c0d72646a237ea3bf74/jcvi-1.0.4.tar.gz#sha256=3d9298e43f78451f10bf731f88047da47fe8b23ba9c767b5f5158809d79295c8 (from https://pypi.org/simple/jcvi/), version: 1.0.4
2021-07-30T00:20:44,291   Found link https://files.pythonhosted.org/packages/57/a2/c4366a77f1ffacfe04a0b338c18a675d878728e89d4ef2b26ae5c15f00d3/jcvi-1.0.5.tar.gz#sha256=5dd0515541548cee07a0cbb26bec70cdea8d502fc365971c420f3b919ef3074b (from https://pypi.org/simple/jcvi/), version: 1.0.5
2021-07-30T00:20:44,291   Found link https://files.pythonhosted.org/packages/95/99/7dbf1fe691d207f09fb898775ee72afb5174253d09bf9a37978860d00b5a/jcvi-1.0.6.tar.gz#sha256=49565d9dfe7519ee58a365a2507162f1483943370a89dfdc357650bbc3540c25 (from https://pypi.org/simple/jcvi/), version: 1.0.6
2021-07-30T00:20:44,292   Found link https://files.pythonhosted.org/packages/b9/81/99c5b7456aa490483fe208753894196113656e9cc69af47b39d42bf218c9/jcvi-1.0.7.tar.gz#sha256=6387cb5ae5e8e566117cdc043f87894a0108066b7ce2ce640a885537943eb153 (from https://pypi.org/simple/jcvi/), version: 1.0.7
2021-07-30T00:20:44,292   Found link https://files.pythonhosted.org/packages/79/d2/d570003c0045ea92485ea9c5e8f0561d47bbf18ea8951fe31450ca8961ff/jcvi-1.0.8.tar.gz#sha256=64cf47d3bbcc54dabfa8e20bdae7693dba8de8bd67e6c9c70d3ff16f24cf279e (from https://pypi.org/simple/jcvi/), version: 1.0.8
2021-07-30T00:20:44,292   Found link https://files.pythonhosted.org/packages/97/6f/fb49e1603d4617f0a136f86a94e035be5cf1fe34b9ff59ddfc7e5fc5d04d/jcvi-1.0.9.tar.gz#sha256=b03f2385639b601f111c812872763fee6699aa8f2683431347520f5bf9155480 (from https://pypi.org/simple/jcvi/), version: 1.0.9
2021-07-30T00:20:44,292   Found link https://files.pythonhosted.org/packages/9d/ec/6c6329502b18bcaf244d19a66aab8df287ac99c7cbaa0c047a6c18844de8/jcvi-1.0.10.tar.gz#sha256=56881652b39662a54d32c2f6387e9c58e40a925ac326c9bf1b4ba929b5a86562 (from https://pypi.org/simple/jcvi/), version: 1.0.10
2021-07-30T00:20:44,293   Found link https://files.pythonhosted.org/packages/a4/a0/a9827217e298eefcf6a9e94e26f33512204f50954c6209b8eed418cbe9d7/jcvi-1.0.11.tar.gz#sha256=ced5c0f3c6b0356292aa24736cf9c7848da71dd27c8c9e1e8d7acb77bc620ae3 (from https://pypi.org/simple/jcvi/), version: 1.0.11
2021-07-30T00:20:44,293   Found link https://files.pythonhosted.org/packages/04/42/7b9185888061799c56365598139239d4a48d074dfd2d0ff46c85cc032542/jcvi-1.0.12.tar.gz#sha256=3e55598c6be75b991a76904efe002c9c10a970244f46b2443fe333f934d265fd (from https://pypi.org/simple/jcvi/), version: 1.0.12
2021-07-30T00:20:44,293   Found link https://files.pythonhosted.org/packages/2c/e3/587dd5ddba13f6eff78a78b85d0dc7d008b15e5e28d04fc4081cff9f2ca6/jcvi-1.0.13.tar.gz#sha256=659ada559937f5914113a7a60bdc41bd58ddeadf7c1db974e11271b526e8c963 (from https://pypi.org/simple/jcvi/), version: 1.0.13
2021-07-30T00:20:44,293   Found link https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14
2021-07-30T00:20:44,294   Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1
2021-07-30T00:20:44,294   Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2
2021-07-30T00:20:44,294   Found link https://files.pythonhosted.org/packages/f3/4d/90ec025ffba6064f62d2480deebee2096b1c581484f5deb807081f68b826/jcvi-1.1.3.tar.gz#sha256=bff23cbdfa634dd22beff778e7405d509414d3a98b7531397b03db3e0f7037e5 (from https://pypi.org/simple/jcvi/), version: 1.1.3
2021-07-30T00:20:44,294   Found link https://files.pythonhosted.org/packages/aa/77/af2e6dbb516a39b09f908e85b2e1f52c8003bcf822f59434b1241da7d057/jcvi-1.1.4.tar.gz#sha256=de96b414804a5a9884845cc5923e6772339ea86b3aae40d02841e59944ce1777 (from https://pypi.org/simple/jcvi/), version: 1.1.4
2021-07-30T00:20:44,295   Found link https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b (from https://pypi.org/simple/jcvi/), version: 1.1.5
2021-07-30T00:20:44,295   Found link https://files.pythonhosted.org/packages/31/b4/f7d533c9099a7be91b964685e2d86f1986e25c45c6ec7174528f95d4c732/jcvi-1.1.6.tar.gz#sha256=c3a54f22140e4e3962f3cb05a5d9c47952d48b67d0459bf499193828018255a3 (from https://pypi.org/simple/jcvi/), version: 1.1.6
2021-07-30T00:20:44,295   Found link https://files.pythonhosted.org/packages/01/be/3ae008ee2b3a53b46f8953bbaf1c5372b5faaf790ee7c5813201d50fbdaf/jcvi-1.1.7.tar.gz#sha256=2709f0e2420da0f9d5a5da581f8f19bd54d7bb9a9720f0d0e9141f30e84b5ab2 (from https://pypi.org/simple/jcvi/), version: 1.1.7
2021-07-30T00:20:44,296   Found link https://files.pythonhosted.org/packages/01/54/44acf2550250a12ea505f2b4be565357d06bdc87d7ea575f955ae98e9700/jcvi-1.1.8.tar.gz#sha256=8d4ce6586068e6a2fa6e39303f5dab1b6f068a1335be09e2488c5f9387685228 (from https://pypi.org/simple/jcvi/), version: 1.1.8
2021-07-30T00:20:44,296   Found link https://files.pythonhosted.org/packages/f8/da/21a544f6e7177504462669d1d882703c9d189aa18acfe4fb7ae28f541b12/jcvi-1.1.9.tar.gz#sha256=9711e6c5dec2436a4f712385ee165051e6c60c07f2ab0e2984e1139874879c77 (from https://pypi.org/simple/jcvi/), version: 1.1.9
2021-07-30T00:20:44,296   Found link https://files.pythonhosted.org/packages/46/fb/a76158690f188e05a01327bd64d100c8604b752811942f7d387ae6ed52eb/jcvi-1.1.10.tar.gz#sha256=02340bff4e25d38e975e64add2cecfbedc262855567e2a571d0519b13f884e9a (from https://pypi.org/simple/jcvi/), version: 1.1.10
2021-07-30T00:20:44,296   Found link https://files.pythonhosted.org/packages/5b/36/1ed66483a5d733d87bd77466e425ef557fa4e1aa8c779b0acf02a810f822/jcvi-1.1.11.tar.gz#sha256=871ea81abb709470fc2f86038372915211dfb211901a9faed0b84714783780e7 (from https://pypi.org/simple/jcvi/), version: 1.1.11
2021-07-30T00:20:44,297   Found link https://files.pythonhosted.org/packages/7e/5c/76e236becc18806e305a68068ab84eab0eeeb862fbcea38674a7775c72c5/jcvi-1.1.12.tar.gz#sha256=9c688816d2770300a137fe0cdb7c4cdbc0f94e9f96d849cf0c1465af4464f8fe (from https://pypi.org/simple/jcvi/), version: 1.1.12
2021-07-30T00:20:44,297   Found link https://files.pythonhosted.org/packages/77/7a/18a4f1d012563ddb46a28b27884d6de78aab0f2da365961aaa138ee44420/jcvi-1.1.13.tar.gz#sha256=365ccd2b6e876a699e9ef7d6573da2c9f96f48221d8b551d21595c070b5a039d (from https://pypi.org/simple/jcvi/), version: 1.1.13
2021-07-30T00:20:44,297   Found link https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0 (from https://pypi.org/simple/jcvi/), version: 1.1.14
2021-07-30T00:20:44,297   Found link https://files.pythonhosted.org/packages/89/97/1497942bf5ec52ada7cee1ad1961eecbe87361494812c57c9fb7cf659834/jcvi-1.1.15.tar.gz#sha256=d22c72cd566f41ca8e9e47e30ca430ec03fe06cc62dd22a652e8e0257c3a3e90 (from https://pypi.org/simple/jcvi/), version: 1.1.15
2021-07-30T00:20:44,298   Found link https://files.pythonhosted.org/packages/c6/49/63254eb560d3df5dece01e116fa6533f04b18dd76f0b51d8b778c7143864/jcvi-1.1.16.tar.gz#sha256=3e05eccc3d98c496adecb53eae0bdef7da82c1f733b2b0b859123e99e5778170 (from https://pypi.org/simple/jcvi/), version: 1.1.16
2021-07-30T00:20:44,298   Found link https://files.pythonhosted.org/packages/95/94/db0f2759b6f1e6f6e4f7e66f8168b95c846a4ba233a6b71a1bc5352f4014/jcvi-1.1.17.tar.gz#sha256=e8bccf025ce08acdb89bb9f9b3017e38c6ed65f55785edd298338af8adfe3769 (from https://pypi.org/simple/jcvi/), version: 1.1.17
2021-07-30T00:20:44,298 Skipping link: not a file: https://pypi.org/simple/jcvi/
2021-07-30T00:20:44,325 Given no hashes to check 1 links for project 'jcvi': discarding no candidates
2021-07-30T00:20:44,343 Collecting jcvi==1.1.14
2021-07-30T00:20:44,345   Created temporary directory: /tmp/pip-unpack-3evvsb1i
2021-07-30T00:20:44,857   Downloading jcvi-1.1.14.tar.gz (794 kB)
2021-07-30T00:20:45,574   Added jcvi==1.1.14 from https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0 to build tracker '/tmp/pip-req-tracker-586xecc0'
2021-07-30T00:20:45,575     Running setup.py (path:/tmp/pip-wheel-m109u6r6/jcvi_03944ccee8434555907a9d0e92ad5afd/setup.py) egg_info for package jcvi
2021-07-30T00:20:45,576     Created temporary directory: /tmp/pip-pip-egg-info-7ht7ib_9
2021-07-30T00:20:45,576     Running command python setup.py egg_info
2021-07-30T00:20:46,991     /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.1.14' to '1.1.14'
2021-07-30T00:20:46,991       warnings.warn(tmpl.format(**locals()))
2021-07-30T00:20:47,043     running egg_info
2021-07-30T00:20:47,045     creating /tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info
2021-07-30T00:20:47,046     writing /tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/PKG-INFO
2021-07-30T00:20:47,049     writing dependency_links to /tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/dependency_links.txt
2021-07-30T00:20:47,051     writing requirements to /tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/requires.txt
2021-07-30T00:20:47,052     writing top-level names to /tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/top_level.txt
2021-07-30T00:20:47,054     writing manifest file '/tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/SOURCES.txt'
2021-07-30T00:20:47,077     reading manifest file '/tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/SOURCES.txt'
2021-07-30T00:20:47,078     reading manifest template 'MANIFEST.in'
2021-07-30T00:20:47,082     adding license file 'LICENSE'
2021-07-30T00:20:47,090     writing manifest file '/tmp/pip-pip-egg-info-7ht7ib_9/jcvi.egg-info/SOURCES.txt'
2021-07-30T00:20:47,187   Source in /tmp/pip-wheel-m109u6r6/jcvi_03944ccee8434555907a9d0e92ad5afd has version 1.1.14, which satisfies requirement jcvi==1.1.14 from https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0
2021-07-30T00:20:47,188   Removed jcvi==1.1.14 from https://files.pythonhosted.org/packages/b5/bd/37396ec8e4339c5a70aa6a146343446361b0d604e544eeb1850307b167b3/jcvi-1.1.14.tar.gz#sha256=8fc9dec5182ee1e4316e2b08dddfec162c3a0e3700f5890ee913829212263fd0 from build tracker '/tmp/pip-req-tracker-586xecc0'
2021-07-30T00:20:47,193 Created temporary directory: /tmp/pip-unpack-4rs3yw5e
2021-07-30T00:20:47,193 Building wheels for collected packages: jcvi
2021-07-30T00:20:47,197   Created temporary directory: /tmp/pip-wheel-836yyajj
2021-07-30T00:20:47,198   Building wheel for jcvi (setup.py): started
2021-07-30T00:20:47,198   Destination directory: /tmp/pip-wheel-836yyajj
2021-07-30T00:20:47,198   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-m109u6r6/jcvi_03944ccee8434555907a9d0e92ad5afd/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-m109u6r6/jcvi_03944ccee8434555907a9d0e92ad5afd/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-836yyajj
2021-07-30T00:20:48,544   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:484: UserWarning: Normalizing 'v1.1.14' to '1.1.14'
2021-07-30T00:20:48,544     warnings.warn(tmpl.format(**locals()))
2021-07-30T00:20:48,608   running bdist_wheel
2021-07-30T00:20:48,612   running build
2021-07-30T00:20:48,612   running build_py
2021-07-30T00:20:48,617   creating build
2021-07-30T00:20:48,618   creating build/lib.linux-armv7l-3.9
2021-07-30T00:20:48,618   creating build/lib.linux-armv7l-3.9/jcvi
2021-07-30T00:20:48,619   copying jcvi/__init__.py -> build/lib.linux-armv7l-3.9/jcvi
2021-07-30T00:20:48,621   copying jcvi/_version.py -> build/lib.linux-armv7l-3.9/jcvi
2021-07-30T00:20:48,624   creating build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,625   copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,627   copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,630   copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,632   copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,634   copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,637   copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,638   copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,641   copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,643   copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,644   copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,646   copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,648   copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,651   copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,654   copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,657   copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,660   copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,663   copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,665   copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,667   copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,669   copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,672   copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,675   copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,678   copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.9/jcvi/graphics
2021-07-30T00:20:48,682   creating build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,682   copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,684   copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,687   copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,689   copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,692   copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,693   copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,696   copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,698   copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,700   copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,703   copying jcvi/utils/console.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,705   copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,708   copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,710   copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.9/jcvi/utils
2021-07-30T00:20:48,713   creating build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,714   copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,717   copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,718   copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,721   copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,723   copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,725   copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,728   copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,729   copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,731   copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,733   copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,735   copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,738   copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.9/jcvi/algorithms
2021-07-30T00:20:48,742   creating build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,743   copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,747   copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,749   copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,752   copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,754   copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,756   copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,758   copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,760   copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,762   copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,765   copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.9/jcvi/variation
2021-07-30T00:20:48,769   creating build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,770   copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,774   copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,777   copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,779   copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,782   copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,784   copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,785   copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,788   copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,791   copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,793   copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,796   copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,798   copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,800   copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,802   copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,805   copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,808   copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,810   copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.9/jcvi/projects
2021-07-30T00:20:48,814   creating build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,815   copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,816   copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,818   copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,820   copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,823   copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,827   copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,828   copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,831   copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,834   copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,837   copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,839   copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.9/jcvi/compara
2021-07-30T00:20:48,843   creating build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,844   copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,849   copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,852   copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,855   copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,858   copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,860   copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,862   copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,864   copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,867   copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,869   copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,872   copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,874   copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,876   copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,878   copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,885   copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,887   copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,890   copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,893   copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,896   copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,899   copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,901   copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:48,907   creating build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,908   copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,910   copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,913   copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,920   copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,922   copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,924   copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,927   copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,928   copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,931   copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,934   copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,936   copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,939   copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,942   copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,944   copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,946   copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,949   copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,953   copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,956   copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,958   copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,962   copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,964   copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,966   copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,968   copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,970   copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,973   copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.9/jcvi/apps
2021-07-30T00:20:48,977   creating build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,978   copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,980   copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,982   copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,985   copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,987   copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,989   copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,992   copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,994   copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:48,997   copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:49,000   copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:49,002   copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:49,004   copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.9/jcvi/annotation
2021-07-30T00:20:49,009   creating build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,009   copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,012   copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,015   copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,017   copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,020   copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,023   copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,027   copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,030   copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,031   copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,033   copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,036   copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,037   copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,042   copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,044   copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,049   copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,052   copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,053   copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,056   copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,057   copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,059   copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,061   copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,065   copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,069   copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,072   copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,073   copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,076   creating build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,077   copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,078   running egg_info
2021-07-30T00:20:49,109   writing jcvi.egg-info/PKG-INFO
2021-07-30T00:20:49,111   writing dependency_links to jcvi.egg-info/dependency_links.txt
2021-07-30T00:20:49,113   writing requirements to jcvi.egg-info/requires.txt
2021-07-30T00:20:49,114   writing top-level names to jcvi.egg-info/top_level.txt
2021-07-30T00:20:49,132   reading manifest file 'jcvi.egg-info/SOURCES.txt'
2021-07-30T00:20:49,138   reading manifest template 'MANIFEST.in'
2021-07-30T00:20:49,142   adding license file 'LICENSE'
2021-07-30T00:20:49,152   writing manifest file 'jcvi.egg-info/SOURCES.txt'
2021-07-30T00:20:49,159   copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:49,161   copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:49,163   copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,166   copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,171   copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,174   copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,177   copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,179   copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,182   copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,184   copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,186   copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,188   copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,192   copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,195   copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.9/jcvi/utils/data
2021-07-30T00:20:49,212   UPDATING build/lib.linux-armv7l-3.9/jcvi/_version.py
2021-07-30T00:20:49,213   set build/lib.linux-armv7l-3.9/jcvi/_version.py to 'v1.1.14'
2021-07-30T00:20:49,213   running build_ext
2021-07-30T00:20:49,271   cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c
2021-07-30T00:20:49,869   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-m109u6r6/jcvi_03944ccee8434555907a9d0e92ad5afd/jcvi/assembly/chic.pyx
2021-07-30T00:20:49,870     tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-30T00:20:52,760   cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c
2021-07-30T00:20:52,767   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-m109u6r6/jcvi_03944ccee8434555907a9d0e92ad5afd/jcvi/formats/cblast.pyx
2021-07-30T00:20:52,767     tree = Parsing.p_module(s, pxd, full_module_name)
2021-07-30T00:20:53,708   building 'jcvi.assembly.chic' extension
2021-07-30T00:20:53,709   creating build/temp.linux-armv7l-3.9
2021-07-30T00:20:53,709   creating build/temp.linux-armv7l-3.9/jcvi
2021-07-30T00:20:53,710   creating build/temp.linux-armv7l-3.9/jcvi/assembly
2021-07-30T00:20:53,711   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.9/jcvi/assembly/chic.o -O3
2021-07-30T00:20:54,125   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-07-30T00:20:54,126                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-07-30T00:20:54,126                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-07-30T00:20:54,126                    from jcvi/assembly/chic.c:612:
2021-07-30T00:20:54,126   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-07-30T00:20:54,126      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-07-30T00:20:54,127         |  ^~~~~~~
2021-07-30T00:20:57,851   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so
2021-07-30T00:20:57,981   building 'jcvi.formats.cblast' extension
2021-07-30T00:20:57,982   creating build/temp.linux-armv7l-3.9/jcvi/formats
2021-07-30T00:20:57,982   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.9/jcvi/formats/cblast.o -O3
2021-07-30T00:21:07,634   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so
2021-07-30T00:21:07,798   installing to build/bdist.linux-armv7l/wheel
2021-07-30T00:21:07,799   running install
2021-07-30T00:21:07,800   running install_lib
2021-07-30T00:21:07,804   creating build/bdist.linux-armv7l
2021-07-30T00:21:07,805   creating build/bdist.linux-armv7l/wheel
2021-07-30T00:21:07,808   creating build/bdist.linux-armv7l/wheel/jcvi
2021-07-30T00:21:07,810   creating build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,812   copying build/lib.linux-armv7l-3.9/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,818   copying build/lib.linux-armv7l-3.9/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,821   copying build/lib.linux-armv7l-3.9/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,823   copying build/lib.linux-armv7l-3.9/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,826   copying build/lib.linux-armv7l-3.9/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,828   copying build/lib.linux-armv7l-3.9/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,830   copying build/lib.linux-armv7l-3.9/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,832   copying build/lib.linux-armv7l-3.9/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,835   copying build/lib.linux-armv7l-3.9/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,836   copying build/lib.linux-armv7l-3.9/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,838   copying build/lib.linux-armv7l-3.9/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,841   copying build/lib.linux-armv7l-3.9/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,845   copying build/lib.linux-armv7l-3.9/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,848   copying build/lib.linux-armv7l-3.9/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,850   copying build/lib.linux-armv7l-3.9/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,853   copying build/lib.linux-armv7l-3.9/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,856   copying build/lib.linux-armv7l-3.9/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,858   copying build/lib.linux-armv7l-3.9/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,861   copying build/lib.linux-armv7l-3.9/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,863   copying build/lib.linux-armv7l-3.9/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,866   copying build/lib.linux-armv7l-3.9/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,869   copying build/lib.linux-armv7l-3.9/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,871   copying build/lib.linux-armv7l-3.9/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics
2021-07-30T00:21:07,874   creating build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,875   copying build/lib.linux-armv7l-3.9/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,877   copying build/lib.linux-armv7l-3.9/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,880   copying build/lib.linux-armv7l-3.9/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,883   copying build/lib.linux-armv7l-3.9/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,886   copying build/lib.linux-armv7l-3.9/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,888   copying build/lib.linux-armv7l-3.9/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,890   copying build/lib.linux-armv7l-3.9/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,893   copying build/lib.linux-armv7l-3.9/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,896   copying build/lib.linux-armv7l-3.9/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,899   copying build/lib.linux-armv7l-3.9/jcvi/utils/console.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,901   copying build/lib.linux-armv7l-3.9/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,905   creating build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,905   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,908   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,911   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,914   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,917   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,922   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,924   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,926   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,930   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,932   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,935   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,937   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,940   copying build/lib.linux-armv7l-3.9/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data
2021-07-30T00:21:07,942   copying build/lib.linux-armv7l-3.9/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,944   copying build/lib.linux-armv7l-3.9/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils
2021-07-30T00:21:07,946   copying build/lib.linux-armv7l-3.9/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi
2021-07-30T00:21:07,949   creating build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,950   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,953   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,955   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,958   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,961   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,963   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,966   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,968   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,970   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,972   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,975   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,978   copying build/lib.linux-armv7l-3.9/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms
2021-07-30T00:21:07,981   creating build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,982   copying build/lib.linux-armv7l-3.9/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,986   copying build/lib.linux-armv7l-3.9/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,988   copying build/lib.linux-armv7l-3.9/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,991   copying build/lib.linux-armv7l-3.9/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,994   copying build/lib.linux-armv7l-3.9/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,996   copying build/lib.linux-armv7l-3.9/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:07,998   copying build/lib.linux-armv7l-3.9/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:08,000   copying build/lib.linux-armv7l-3.9/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:08,003   copying build/lib.linux-armv7l-3.9/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:08,006   copying build/lib.linux-armv7l-3.9/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation
2021-07-30T00:21:08,009   copying build/lib.linux-armv7l-3.9/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi
2021-07-30T00:21:08,012   creating build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,013   copying build/lib.linux-armv7l-3.9/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,018   copying build/lib.linux-armv7l-3.9/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,021   copying build/lib.linux-armv7l-3.9/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,023   copying build/lib.linux-armv7l-3.9/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,026   copying build/lib.linux-armv7l-3.9/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,028   copying build/lib.linux-armv7l-3.9/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,030   copying build/lib.linux-armv7l-3.9/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,033   copying build/lib.linux-armv7l-3.9/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,036   copying build/lib.linux-armv7l-3.9/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,039   copying build/lib.linux-armv7l-3.9/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,042   copying build/lib.linux-armv7l-3.9/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,045   copying build/lib.linux-armv7l-3.9/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,047   copying build/lib.linux-armv7l-3.9/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,050   copying build/lib.linux-armv7l-3.9/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,053   copying build/lib.linux-armv7l-3.9/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,056   copying build/lib.linux-armv7l-3.9/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,059   copying build/lib.linux-armv7l-3.9/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects
2021-07-30T00:21:08,062   creating build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,063   copying build/lib.linux-armv7l-3.9/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,065   copying build/lib.linux-armv7l-3.9/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,067   copying build/lib.linux-armv7l-3.9/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,070   copying build/lib.linux-armv7l-3.9/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,073   copying build/lib.linux-armv7l-3.9/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,078   copying build/lib.linux-armv7l-3.9/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,080   copying build/lib.linux-armv7l-3.9/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,082   copying build/lib.linux-armv7l-3.9/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,085   copying build/lib.linux-armv7l-3.9/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,088   copying build/lib.linux-armv7l-3.9/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,090   copying build/lib.linux-armv7l-3.9/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara
2021-07-30T00:21:08,094   creating build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,095   copying build/lib.linux-armv7l-3.9/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,099   copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,107   copying build/lib.linux-armv7l-3.9/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,110   copying build/lib.linux-armv7l-3.9/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,113   copying build/lib.linux-armv7l-3.9/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,116   copying build/lib.linux-armv7l-3.9/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,118   copying build/lib.linux-armv7l-3.9/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,122   copying build/lib.linux-armv7l-3.9/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,124   copying build/lib.linux-armv7l-3.9/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,127   copying build/lib.linux-armv7l-3.9/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,129   copying build/lib.linux-armv7l-3.9/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,132   copying build/lib.linux-armv7l-3.9/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,135   copying build/lib.linux-armv7l-3.9/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,137   copying build/lib.linux-armv7l-3.9/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,139   copying build/lib.linux-armv7l-3.9/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,142   copying build/lib.linux-armv7l-3.9/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,146   copying build/lib.linux-armv7l-3.9/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,148   copying build/lib.linux-armv7l-3.9/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,151   copying build/lib.linux-armv7l-3.9/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,154   copying build/lib.linux-armv7l-3.9/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,157   copying build/lib.linux-armv7l-3.9/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,160   copying build/lib.linux-armv7l-3.9/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,163   copying build/lib.linux-armv7l-3.9/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly
2021-07-30T00:21:08,168   creating build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,169   copying build/lib.linux-armv7l-3.9/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,171   copying build/lib.linux-armv7l-3.9/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,173   copying build/lib.linux-armv7l-3.9/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,175   copying build/lib.linux-armv7l-3.9/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,178   copying build/lib.linux-armv7l-3.9/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,180   copying build/lib.linux-armv7l-3.9/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,183   copying build/lib.linux-armv7l-3.9/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,184   copying build/lib.linux-armv7l-3.9/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,187   copying build/lib.linux-armv7l-3.9/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,190   copying build/lib.linux-armv7l-3.9/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,192   copying build/lib.linux-armv7l-3.9/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,195   copying build/lib.linux-armv7l-3.9/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,197   copying build/lib.linux-armv7l-3.9/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,199   copying build/lib.linux-armv7l-3.9/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,202   copying build/lib.linux-armv7l-3.9/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,205   copying build/lib.linux-armv7l-3.9/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,209   copying build/lib.linux-armv7l-3.9/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,212   copying build/lib.linux-armv7l-3.9/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,214   copying build/lib.linux-armv7l-3.9/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,219   copying build/lib.linux-armv7l-3.9/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,221   copying build/lib.linux-armv7l-3.9/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,224   copying build/lib.linux-armv7l-3.9/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,226   copying build/lib.linux-armv7l-3.9/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,228   copying build/lib.linux-armv7l-3.9/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,231   copying build/lib.linux-armv7l-3.9/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps
2021-07-30T00:21:08,235   creating build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,235   copying build/lib.linux-armv7l-3.9/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,238   copying build/lib.linux-armv7l-3.9/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,240   copying build/lib.linux-armv7l-3.9/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,243   copying build/lib.linux-armv7l-3.9/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,246   copying build/lib.linux-armv7l-3.9/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,247   copying build/lib.linux-armv7l-3.9/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,250   copying build/lib.linux-armv7l-3.9/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,253   copying build/lib.linux-armv7l-3.9/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,256   copying build/lib.linux-armv7l-3.9/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,259   copying build/lib.linux-armv7l-3.9/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,262   copying build/lib.linux-armv7l-3.9/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,264   copying build/lib.linux-armv7l-3.9/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation
2021-07-30T00:21:08,268   creating build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,269   copying build/lib.linux-armv7l-3.9/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,272   copying build/lib.linux-armv7l-3.9/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,275   copying build/lib.linux-armv7l-3.9/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,278   copying build/lib.linux-armv7l-3.9/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,280   copying build/lib.linux-armv7l-3.9/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,283   copying build/lib.linux-armv7l-3.9/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,288   copying build/lib.linux-armv7l-3.9/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,291   copying build/lib.linux-armv7l-3.9/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,293   copying build/lib.linux-armv7l-3.9/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,295   copying build/lib.linux-armv7l-3.9/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,298   copying build/lib.linux-armv7l-3.9/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,300   copying build/lib.linux-armv7l-3.9/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,305   copying build/lib.linux-armv7l-3.9/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,308   copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,329   copying build/lib.linux-armv7l-3.9/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,333   copying build/lib.linux-armv7l-3.9/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,336   copying build/lib.linux-armv7l-3.9/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,338   copying build/lib.linux-armv7l-3.9/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,340   copying build/lib.linux-armv7l-3.9/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,342   copying build/lib.linux-armv7l-3.9/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,344   copying build/lib.linux-armv7l-3.9/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,347   copying build/lib.linux-armv7l-3.9/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,349   copying build/lib.linux-armv7l-3.9/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,352   copying build/lib.linux-armv7l-3.9/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,357   copying build/lib.linux-armv7l-3.9/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,359   copying build/lib.linux-armv7l-3.9/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,361   copying build/lib.linux-armv7l-3.9/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats
2021-07-30T00:21:08,363   running install_egg_info
2021-07-30T00:21:08,373   Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.1.14-py3.9.egg-info
2021-07-30T00:21:08,387   running install_scripts
2021-07-30T00:21:08,454   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-07-30T00:21:08,458   creating build/bdist.linux-armv7l/wheel/jcvi-1.1.14.dist-info/WHEEL
2021-07-30T00:21:08,461   creating '/tmp/pip-wheel-836yyajj/jcvi-1.1.14-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-07-30T00:21:08,463   adding 'jcvi/__init__.py'
2021-07-30T00:21:08,464   adding 'jcvi/_version.py'
2021-07-30T00:21:08,466   adding 'jcvi/algorithms/__init__.py'
2021-07-30T00:21:08,467   adding 'jcvi/algorithms/__main__.py'
2021-07-30T00:21:08,469   adding 'jcvi/algorithms/ec.py'
2021-07-30T00:21:08,471   adding 'jcvi/algorithms/formula.py'
2021-07-30T00:21:08,474   adding 'jcvi/algorithms/graph.py'
2021-07-30T00:21:08,476   adding 'jcvi/algorithms/lis.py'
2021-07-30T00:21:08,480   adding 'jcvi/algorithms/lpsolve.py'
2021-07-30T00:21:08,482   adding 'jcvi/algorithms/matrix.py'
2021-07-30T00:21:08,483   adding 'jcvi/algorithms/maxsum.py'
2021-07-30T00:21:08,484   adding 'jcvi/algorithms/ml.py'
2021-07-30T00:21:08,486   adding 'jcvi/algorithms/supermap.py'
2021-07-30T00:21:08,488   adding 'jcvi/algorithms/tsp.py'
2021-07-30T00:21:08,490   adding 'jcvi/annotation/__init__.py'
2021-07-30T00:21:08,491   adding 'jcvi/annotation/__main__.py'
2021-07-30T00:21:08,494   adding 'jcvi/annotation/ahrd.py'
2021-07-30T00:21:08,496   adding 'jcvi/annotation/automaton.py'
2021-07-30T00:21:08,497   adding 'jcvi/annotation/depth.py'
2021-07-30T00:21:08,499   adding 'jcvi/annotation/evm.py'
2021-07-30T00:21:08,501   adding 'jcvi/annotation/maker.py'
2021-07-30T00:21:08,504   adding 'jcvi/annotation/pasa.py'
2021-07-30T00:21:08,506   adding 'jcvi/annotation/qc.py'
2021-07-30T00:21:08,512   adding 'jcvi/annotation/reformat.py'
2021-07-30T00:21:08,515   adding 'jcvi/annotation/stats.py'
2021-07-30T00:21:08,517   adding 'jcvi/annotation/train.py'
2021-07-30T00:21:08,519   adding 'jcvi/apps/__init__.py'
2021-07-30T00:21:08,520   adding 'jcvi/apps/__main__.py'
2021-07-30T00:21:08,522   adding 'jcvi/apps/align.py'
2021-07-30T00:21:08,531   adding 'jcvi/apps/base.py'
2021-07-30T00:21:08,534   adding 'jcvi/apps/biomart.py'
2021-07-30T00:21:08,536   adding 'jcvi/apps/blastplus.py'
2021-07-30T00:21:08,537   adding 'jcvi/apps/bowtie.py'
2021-07-30T00:21:08,539   adding 'jcvi/apps/bwa.py'
2021-07-30T00:21:08,541   adding 'jcvi/apps/cdhit.py'
2021-07-30T00:21:08,542   adding 'jcvi/apps/emboss.py'
2021-07-30T00:21:08,545   adding 'jcvi/apps/fetch.py'
2021-07-30T00:21:08,548   adding 'jcvi/apps/gbsubmit.py'
2021-07-30T00:21:08,550   adding 'jcvi/apps/gmap.py'
2021-07-30T00:21:08,553   adding 'jcvi/apps/grid.py'
2021-07-30T00:21:08,557   adding 'jcvi/apps/ks.py'
2021-07-30T00:21:08,559   adding 'jcvi/apps/lastz.py'
2021-07-30T00:21:08,561   adding 'jcvi/apps/mask.py'
2021-07-30T00:21:08,566   adding 'jcvi/apps/phylo.py'
2021-07-30T00:21:08,567   adding 'jcvi/apps/r.py'
2021-07-30T00:21:08,569   adding 'jcvi/apps/restriction.py'
2021-07-30T00:21:08,570   adding 'jcvi/apps/script.py'
2021-07-30T00:21:08,571   adding 'jcvi/apps/softlink.py'
2021-07-30T00:21:08,576   adding 'jcvi/apps/uclust.py'
2021-07-30T00:21:08,578   adding 'jcvi/apps/uniprot.py'
2021-07-30T00:21:08,579   adding 'jcvi/apps/vecscreen.py'
2021-07-30T00:21:08,581   adding 'jcvi/assembly/__init__.py'
2021-07-30T00:21:08,582   adding 'jcvi/assembly/__main__.py'
2021-07-30T00:21:08,592   adding 'jcvi/assembly/allmaps.py'
2021-07-30T00:21:08,595   adding 'jcvi/assembly/allpaths.py'
2021-07-30T00:21:08,597   adding 'jcvi/assembly/automaton.py'
2021-07-30T00:21:08,599   adding 'jcvi/assembly/base.py'
2021-07-30T00:21:08,604   adding 'jcvi/assembly/ca.py'
2021-07-30T00:21:08,652   adding 'jcvi/assembly/chic.cpython-39-arm-linux-gnueabihf.so'
2021-07-30T00:21:08,655   adding 'jcvi/assembly/chic.pyx'
2021-07-30T00:21:08,657   adding 'jcvi/assembly/coverage.py'
2021-07-30T00:21:08,658   adding 'jcvi/assembly/gaps.py'
2021-07-30T00:21:08,661   adding 'jcvi/assembly/geneticmap.py'
2021-07-30T00:21:08,666   adding 'jcvi/assembly/goldenpath.py'
2021-07-30T00:21:08,674   adding 'jcvi/assembly/hic.py'
2021-07-30T00:21:08,679   adding 'jcvi/assembly/kmer.py'
2021-07-30T00:21:08,681   adding 'jcvi/assembly/opticalmap.py'
2021-07-30T00:21:08,685   adding 'jcvi/assembly/patch.py'
2021-07-30T00:21:08,688   adding 'jcvi/assembly/postprocess.py'
2021-07-30T00:21:08,691   adding 'jcvi/assembly/preprocess.py'
2021-07-30T00:21:08,693   adding 'jcvi/assembly/sim.py'
2021-07-30T00:21:08,694   adding 'jcvi/assembly/soap.py'
2021-07-30T00:21:08,697   adding 'jcvi/assembly/syntenypath.py'
2021-07-30T00:21:08,698   adding 'jcvi/assembly/trinity.py'
2021-07-30T00:21:08,700   adding 'jcvi/compara/__init__.py'
2021-07-30T00:21:08,701   adding 'jcvi/compara/__main__.py'
2021-07-30T00:21:08,703   adding 'jcvi/compara/blastfilter.py'
2021-07-30T00:21:08,707   adding 'jcvi/compara/catalog.py'
2021-07-30T00:21:08,710   adding 'jcvi/compara/fractionation.py'
2021-07-30T00:21:08,712   adding 'jcvi/compara/pad.py'
2021-07-30T00:21:08,714   adding 'jcvi/compara/phylogeny.py'
2021-07-30T00:21:08,716   adding 'jcvi/compara/quota.py'
2021-07-30T00:21:08,718   adding 'jcvi/compara/reconstruct.py'
2021-07-30T00:21:08,719   adding 'jcvi/compara/synfind.py'
2021-07-30T00:21:08,728   adding 'jcvi/compara/synteny.py'
2021-07-30T00:21:08,731   adding 'jcvi/formats/__init__.py'
2021-07-30T00:21:08,732   adding 'jcvi/formats/__main__.py'
2021-07-30T00:21:08,740   adding 'jcvi/formats/agp.py'
2021-07-30T00:21:08,745   adding 'jcvi/formats/base.py'
2021-07-30T00:21:08,755   adding 'jcvi/formats/bed.py'
2021-07-30T00:21:08,761   adding 'jcvi/formats/blast.py'
2021-07-30T00:21:08,897   adding 'jcvi/formats/cblast.cpython-39-arm-linux-gnueabihf.so'
2021-07-30T00:21:08,904   adding 'jcvi/formats/cblast.pyx'
2021-07-30T00:21:08,906   adding 'jcvi/formats/cdt.py'
2021-07-30T00:21:08,907   adding 'jcvi/formats/chain.py'
2021-07-30T00:21:08,909   adding 'jcvi/formats/contig.py'
2021-07-30T00:21:08,911   adding 'jcvi/formats/coords.py'
2021-07-30T00:21:08,913   adding 'jcvi/formats/excel.py'
2021-07-30T00:21:08,924   adding 'jcvi/formats/fasta.py'
2021-07-30T00:21:08,928   adding 'jcvi/formats/fastq.py'
2021-07-30T00:21:08,931   adding 'jcvi/formats/genbank.py'
2021-07-30T00:21:08,946   adding 'jcvi/formats/gff.py'
2021-07-30T00:21:08,948   adding 'jcvi/formats/html.py'
2021-07-30T00:21:08,950   adding 'jcvi/formats/maf.py'
2021-07-30T00:21:08,951   adding 'jcvi/formats/obo.py'
2021-07-30T00:21:08,952   adding 'jcvi/formats/paf.py'
2021-07-30T00:21:08,953   adding 'jcvi/formats/pdf.py'
2021-07-30T00:21:08,955   adding 'jcvi/formats/psl.py'
2021-07-30T00:21:08,957   adding 'jcvi/formats/pyblast.py'
2021-07-30T00:21:08,960   adding 'jcvi/formats/sam.py'
2021-07-30T00:21:08,962   adding 'jcvi/formats/sizes.py'
2021-07-30T00:21:08,965   adding 'jcvi/formats/vcf.py'
2021-07-30T00:21:08,968   adding 'jcvi/graphics/__init__.py'
2021-07-30T00:21:08,969   adding 'jcvi/graphics/__main__.py'
2021-07-30T00:21:08,971   adding 'jcvi/graphics/align.py'
2021-07-30T00:21:08,974   adding 'jcvi/graphics/assembly.py'
2021-07-30T00:21:08,977   adding 'jcvi/graphics/base.py'
2021-07-30T00:21:08,979   adding 'jcvi/graphics/blastplot.py'
2021-07-30T00:21:08,982   adding 'jcvi/graphics/chromosome.py'
2021-07-30T00:21:08,985   adding 'jcvi/graphics/coverage.py'
2021-07-30T00:21:08,987   adding 'jcvi/graphics/dotplot.py'
2021-07-30T00:21:08,990   adding 'jcvi/graphics/glyph.py'
2021-07-30T00:21:08,994   adding 'jcvi/graphics/grabseeds.py'
2021-07-30T00:21:08,995   adding 'jcvi/graphics/graph.py'
2021-07-30T00:21:08,997   adding 'jcvi/graphics/heatmap.py'
2021-07-30T00:21:08,999   adding 'jcvi/graphics/histogram.py'
2021-07-30T00:21:09,001   adding 'jcvi/graphics/karyotype.py'
2021-07-30T00:21:09,005   adding 'jcvi/graphics/landscape.py'
2021-07-30T00:21:09,007   adding 'jcvi/graphics/logo.py'
2021-07-30T00:21:09,008   adding 'jcvi/graphics/mummerplot.py'
2021-07-30T00:21:09,011   adding 'jcvi/graphics/synteny.py'
2021-07-30T00:21:09,013   adding 'jcvi/graphics/table.py'
2021-07-30T00:21:09,016   adding 'jcvi/graphics/tree.py'
2021-07-30T00:21:09,018   adding 'jcvi/graphics/wheel.py'
2021-07-30T00:21:09,019   adding 'jcvi/graphics/whisker.py'
2021-07-30T00:21:09,021   adding 'jcvi/projects/__init__.py'
2021-07-30T00:21:09,022   adding 'jcvi/projects/__main__.py'
2021-07-30T00:21:09,025   adding 'jcvi/projects/age.py'
2021-07-30T00:21:09,026   adding 'jcvi/projects/alfalfa.py'
2021-07-30T00:21:09,029   adding 'jcvi/projects/allmaps.py'
2021-07-30T00:21:09,030   adding 'jcvi/projects/bites.py'
2021-07-30T00:21:09,032   adding 'jcvi/projects/heterosis.py'
2021-07-30T00:21:09,034   adding 'jcvi/projects/ies.py'
2021-07-30T00:21:09,037   adding 'jcvi/projects/misc.py'
2021-07-30T00:21:09,041   adding 'jcvi/projects/napus.py'
2021-07-30T00:21:09,043   adding 'jcvi/projects/pineapple.py'
2021-07-30T00:21:09,045   adding 'jcvi/projects/pistachio.py'
2021-07-30T00:21:09,053   adding 'jcvi/projects/str.py'
2021-07-30T00:21:09,056   adding 'jcvi/projects/sugarcane.py'
2021-07-30T00:21:09,060   adding 'jcvi/projects/synfind.py'
2021-07-30T00:21:09,063   adding 'jcvi/projects/tgbs.py'
2021-07-30T00:21:09,065   adding 'jcvi/projects/vanilla.py'
2021-07-30T00:21:09,067   adding 'jcvi/utils/__init__.py'
2021-07-30T00:21:09,068   adding 'jcvi/utils/__main__.py'
2021-07-30T00:21:09,071   adding 'jcvi/utils/aws.py'
2021-07-30T00:21:09,074   adding 'jcvi/utils/cbook.py'
2021-07-30T00:21:09,075   adding 'jcvi/utils/console.py'
2021-07-30T00:21:09,077   adding 'jcvi/utils/db.py'
2021-07-30T00:21:09,078   adding 'jcvi/utils/ez_setup.py'
2021-07-30T00:21:09,079   adding 'jcvi/utils/grouper.py'
2021-07-30T00:21:09,081   adding 'jcvi/utils/orderedcollections.py'
2021-07-30T00:21:09,084   adding 'jcvi/utils/range.py'
2021-07-30T00:21:09,085   adding 'jcvi/utils/table.py'
2021-07-30T00:21:09,087   adding 'jcvi/utils/taxonomy.py'
2021-07-30T00:21:09,088   adding 'jcvi/utils/webcolors.py'
2021-07-30T00:21:09,092   adding 'jcvi/utils/data/Airswing.ttf'
2021-07-30T00:21:09,109   adding 'jcvi/utils/data/Collegia.ttf'
2021-07-30T00:21:09,113   adding 'jcvi/utils/data/HookedUp.ttf'
2021-07-30T00:21:09,119   adding 'jcvi/utils/data/Humor-Sans.ttf'
2021-07-30T00:21:09,123   adding 'jcvi/utils/data/TREDs.meta.csv'
2021-07-30T00:21:09,125   adding 'jcvi/utils/data/__init__.py'
2021-07-30T00:21:09,126   adding 'jcvi/utils/data/adapters.fasta'
2021-07-30T00:21:09,127   adding 'jcvi/utils/data/blosum80.mat'
2021-07-30T00:21:09,129   adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc'
2021-07-30T00:21:09,130   adding 'jcvi/utils/data/colorchecker.txt'
2021-07-30T00:21:09,136   adding 'jcvi/utils/data/hg38.band.txt'
2021-07-30T00:21:09,138   adding 'jcvi/utils/data/hg38.chrom.sizes'
2021-07-30T00:21:09,140   adding 'jcvi/utils/data/instance.json'
2021-07-30T00:21:09,141   adding 'jcvi/variation/__init__.py'
2021-07-30T00:21:09,142   adding 'jcvi/variation/__main__.py'
2021-07-30T00:21:09,147   adding 'jcvi/variation/cnv.py'
2021-07-30T00:21:09,149   adding 'jcvi/variation/deconvolute.py'
2021-07-30T00:21:09,151   adding 'jcvi/variation/delly.py'
2021-07-30T00:21:09,153   adding 'jcvi/variation/impute.py'
2021-07-30T00:21:09,155   adding 'jcvi/variation/phase.py'
2021-07-30T00:21:09,157   adding 'jcvi/variation/snp.py'
2021-07-30T00:21:09,164   adding 'jcvi/variation/str.py'
2021-07-30T00:21:09,165   adding 'jcvi/variation/tassel.py'
2021-07-30T00:21:09,168   adding 'jcvi-1.1.14.dist-info/LICENSE'
2021-07-30T00:21:09,169   adding 'jcvi-1.1.14.dist-info/METADATA'
2021-07-30T00:21:09,170   adding 'jcvi-1.1.14.dist-info/WHEEL'
2021-07-30T00:21:09,171   adding 'jcvi-1.1.14.dist-info/top_level.txt'
2021-07-30T00:21:09,174   adding 'jcvi-1.1.14.dist-info/RECORD'
2021-07-30T00:21:09,197   removing build/bdist.linux-armv7l/wheel
2021-07-30T00:21:09,489   Building wheel for jcvi (setup.py): finished with status 'done'
2021-07-30T00:21:09,507   Created wheel for jcvi: filename=jcvi-1.1.14-cp39-cp39-linux_armv7l.whl size=1201139 sha256=00789d6a321b7a260f71e410d10eae8c5a92805f1af17a4b38b44a2acb972acc
2021-07-30T00:21:09,508   Stored in directory: /tmp/pip-ephem-wheel-cache-ku6ervtf/wheels/b2/17/21/c270feca711fb66b5edbf5ccfbf205a6a33ad19af26efc2703
2021-07-30T00:21:09,527 Successfully built jcvi
2021-07-30T00:21:09,574 Removed build tracker: '/tmp/pip-req-tracker-586xecc0'