2021-07-30T18:59:54,954 Created temporary directory: /tmp/pip-ephem-wheel-cache-r2f6c_g8 2021-07-30T18:59:54,960 Created temporary directory: /tmp/pip-req-tracker-954tkdvf 2021-07-30T18:59:54,961 Initialized build tracking at /tmp/pip-req-tracker-954tkdvf 2021-07-30T18:59:54,962 Created build tracker: /tmp/pip-req-tracker-954tkdvf 2021-07-30T18:59:54,962 Entered build tracker: /tmp/pip-req-tracker-954tkdvf 2021-07-30T18:59:54,963 Created temporary directory: /tmp/pip-wheel-0jq9qulm 2021-07-30T18:59:55,020 WARNING: The index url "/" seems invalid, please provide a scheme. 2021-07-30T18:59:55,021 WARNING: The index url "t" seems invalid, please provide a scheme. 2021-07-30T18:59:55,022 WARNING: The index url "m" seems invalid, please provide a scheme. 2021-07-30T18:59:55,023 WARNING: The index url "p" seems invalid, please provide a scheme. 2021-07-30T18:59:55,024 Looking in indexes: https://pypi.org/simple, /, t, m, p 2021-07-30T18:59:55,026 WARNING: Url '/pharmacodi/' is ignored. It is either a non-existing path or lacks a specific scheme. 2021-07-30T18:59:55,027 WARNING: Url 't/pharmacodi/' is ignored. It is either a non-existing path or lacks a specific scheme. 2021-07-30T18:59:55,028 WARNING: Url 'm/pharmacodi/' is ignored. It is either a non-existing path or lacks a specific scheme. 2021-07-30T18:59:55,029 WARNING: Url 'p/pharmacodi/' is ignored. It is either a non-existing path or lacks a specific scheme. 2021-07-30T18:59:55,030 1 location(s) to search for versions of pharmacodi: 2021-07-30T18:59:55,030 * https://pypi.org/simple/pharmacodi/ 2021-07-30T18:59:55,031 Fetching project page and analyzing links: https://pypi.org/simple/pharmacodi/ 2021-07-30T18:59:55,033 Getting page https://pypi.org/simple/pharmacodi/ 2021-07-30T18:59:55,037 Found index url https://pypi.org/simple 2021-07-30T18:59:55,396 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ef/fe/00d6b0714394a4895592dfc165633c5538544327ead3606fba1539c0e626/PharmacoDI-0.0.1-py3.8.egg#sha256=a5b291e4d183b7aff6e6227d7bbc110eda3ca8e24da056490482f6ed482d1abc (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,397 Found link https://files.pythonhosted.org/packages/3a/9e/612d134c1fb67c2f3d821caac947da3612231a42ed3d48d93760f8232b4d/PharmacoDI-0.0.1.tar.gz#sha256=bf701641034eb4be1ecae36d55b5379f30c5c4309f40c852044e73f747fc1402 (from https://pypi.org/simple/pharmacodi/), version: 0.0.1 2021-07-30T18:59:55,398 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/65/d1/58d48213c23a81140cdaffc9f67cb40e1c8a3568c4ded9d3407468461500/PharmacoDI-0.0.3-py3.8.egg#sha256=d6427b8b334ab100ac0c818bd2456459f79c9d816a77de03c1c7cd1c1008f92c (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,399 Found link https://files.pythonhosted.org/packages/ef/57/561eec13fd346d32748ae64330a6ecb46ee5500e3d15bf1afc644d272b30/PharmacoDI-0.0.4.tar.gz#sha256=1be88085d5a7612b7b3f5a1334ba8494aa0b6502cd8447782783e15cbc6a0fc6 (from https://pypi.org/simple/pharmacodi/), version: 0.0.4 2021-07-30T18:59:55,400 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ef/3c/6fa214b05698d0bb80e128969976adbd63378a4011891dbe04bad6d20c78/PharmacoDI-0.0.5-py3.8.egg#sha256=b370403716b1110081c8c59ab299cbe50c8dc1e879ba8140c4cc0e7f1beec691 (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,401 Found link https://files.pythonhosted.org/packages/62/09/3f7c908dd7322d0963fbf313808e4d071474d8036fe0af9b60b51cae312a/PharmacoDI-0.0.5.tar.gz#sha256=95fcfedbb3ada087b865b57a80cf8b9e6b39ae40b7558aae7af0b1229d2ede8a (from https://pypi.org/simple/pharmacodi/), version: 0.0.5 2021-07-30T18:59:55,401 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/d4/24/ccb0dce94a284386ec84b6c3de5ec9ffb21503e3b3c8b2736f0116101402/PharmacoDI-0.0.6-py3.8.egg#sha256=f4764140cea646cabf664c473a5360f01af4a6319a9fe89a606c4e3a02ddfb8c (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,402 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2a/d8/3426e954b409c00b33924645486e1acb9cd9b7ea7957890068221e5a2495/PharmacoDI-0.0.7-py3.8.egg#sha256=308b014ca3564c0632d5093d28a3f64550a8f5b088da3f8d9a62e14d2f5e8817 (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,402 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/bb/db/43f618cfae9bef737a0c938b2c09bc95e0ab219d4591dc9ad6e4ca35c90d/PharmacoDI-0.0.8-py3.8.egg#sha256=e3c8acd15985a72c98baa93477a7f7c1e3596971a6bfa364bb184468c1751e87 (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,403 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/64/fb/c31c2689cd30d83d734b5ae128d695c53c329b7708974704abf02ae1b620/PharmacoDI-0.0.9-py3.8.egg#sha256=b5d630ad4a6cd6605db6c991eda7a3d2f083b921dc31e08c64658b58a457ee73 (from https://pypi.org/simple/pharmacodi/) 2021-07-30T18:59:55,403 Found link https://files.pythonhosted.org/packages/56/02/5253fe42467aa76835c9018888bfc60399deca5f8bcad49d1922d07cbc09/PharmacoDI-0.0.9.tar.gz#sha256=e6d8011633f3bf2c1983aa2584c7d04259b803a81e30140ea8f2fda64439a0b4 (from https://pypi.org/simple/pharmacodi/), version: 0.0.9 2021-07-30T18:59:55,432 Given no hashes to check 1 links for project 'pharmacodi': discarding no candidates 2021-07-30T18:59:55,463 Collecting pharmacodi==0.0.9 2021-07-30T18:59:55,466 Created temporary directory: /tmp/pip-unpack-htlbd094 2021-07-30T18:59:55,658 Downloading PharmacoDI-0.0.9.tar.gz (32 kB) 2021-07-30T18:59:55,890 Added pharmacodi==0.0.9 from https://files.pythonhosted.org/packages/56/02/5253fe42467aa76835c9018888bfc60399deca5f8bcad49d1922d07cbc09/PharmacoDI-0.0.9.tar.gz#sha256=e6d8011633f3bf2c1983aa2584c7d04259b803a81e30140ea8f2fda64439a0b4 to build tracker '/tmp/pip-req-tracker-954tkdvf' 2021-07-30T18:59:55,893 Running setup.py (path:/tmp/pip-wheel-0jq9qulm/pharmacodi_2113519b856c494da62c1d3b24ad0f2d/setup.py) egg_info for package pharmacodi 2021-07-30T18:59:55,896 Created temporary directory: /tmp/pip-pip-egg-info-0p03ykz2 2021-07-30T18:59:55,897 Running command python setup.py egg_info 2021-07-30T18:59:57,808 running egg_info 2021-07-30T18:59:57,813 creating /tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info 2021-07-30T18:59:57,815 writing /tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/PKG-INFO 2021-07-30T18:59:57,821 writing requirements to /tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/requires.txt 2021-07-30T18:59:57,823 writing dependency_links to /tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/dependency_links.txt 2021-07-30T18:59:57,825 writing top-level names to /tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/top_level.txt 2021-07-30T18:59:57,831 writing manifest file '/tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/SOURCES.txt' 2021-07-30T18:59:58,191 reading manifest file '/tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/SOURCES.txt' 2021-07-30T18:59:58,194 reading manifest template 'MANIFEST.in' 2021-07-30T18:59:58,211 warning: no previously-included files matching '*' found under directory 'data' 2021-07-30T18:59:58,213 warning: no previously-included files matching '*' found under directory 'scripts' 2021-07-30T18:59:58,214 warning: no previously-included files matching '*' found under directory 'dist' 2021-07-30T18:59:58,222 writing manifest file '/tmp/pip-pip-egg-info-0p03ykz2/PharmacoDI.egg-info/SOURCES.txt' 2021-07-30T18:59:58,354 Source in /tmp/pip-wheel-0jq9qulm/pharmacodi_2113519b856c494da62c1d3b24ad0f2d has version 0.0.9, which satisfies requirement pharmacodi==0.0.9 from https://files.pythonhosted.org/packages/56/02/5253fe42467aa76835c9018888bfc60399deca5f8bcad49d1922d07cbc09/PharmacoDI-0.0.9.tar.gz#sha256=e6d8011633f3bf2c1983aa2584c7d04259b803a81e30140ea8f2fda64439a0b4 2021-07-30T18:59:58,356 Removed pharmacodi==0.0.9 from https://files.pythonhosted.org/packages/56/02/5253fe42467aa76835c9018888bfc60399deca5f8bcad49d1922d07cbc09/PharmacoDI-0.0.9.tar.gz#sha256=e6d8011633f3bf2c1983aa2584c7d04259b803a81e30140ea8f2fda64439a0b4 from build tracker '/tmp/pip-req-tracker-954tkdvf' 2021-07-30T18:59:58,364 Created temporary directory: /tmp/pip-unpack-fcrtzlj2 2021-07-30T18:59:58,365 Building wheels for collected packages: pharmacodi 2021-07-30T18:59:58,374 Created temporary directory: /tmp/pip-wheel-8yecdvto 2021-07-30T18:59:58,375 Building wheel for pharmacodi (setup.py): started 2021-07-30T18:59:58,376 Destination directory: /tmp/pip-wheel-8yecdvto 2021-07-30T18:59:58,376 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-0jq9qulm/pharmacodi_2113519b856c494da62c1d3b24ad0f2d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-0jq9qulm/pharmacodi_2113519b856c494da62c1d3b24ad0f2d/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8yecdvto 2021-07-30T19:00:00,285 running bdist_wheel 2021-07-30T19:00:00,299 running build 2021-07-30T19:00:00,300 running build_py 2021-07-30T19:00:00,640 creating build 2021-07-30T19:00:00,640 creating build/lib 2021-07-30T19:00:00,642 creating build/lib/PharmacoDI 2021-07-30T19:00:00,645 copying PharmacoDI/download_psets.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,650 copying PharmacoDI/build_primary_pset_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,655 copying PharmacoDI/map_genes_to_genomic_coordinates.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,659 copying PharmacoDI/build_gene_compound_tissue_dataset_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,665 copying PharmacoDI/build_experiment_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,672 copying PharmacoDI/build_clinical_trial_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,678 copying PharmacoDI/build_meta_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,685 copying PharmacoDI/build_all_pset_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,692 copying PharmacoDI/get_target_annotations.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,698 copying PharmacoDI/build_dataset_join_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,704 copying PharmacoDI/download_canonical_psets.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,709 copying PharmacoDI/get_gene_targets.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,715 copying PharmacoDI/build_target_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,722 copying PharmacoDI/__init__.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,727 copying PharmacoDI/build_cellosaurus.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,733 copying PharmacoDI/write_pset_table.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,739 copying PharmacoDI/combine_pset_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,745 copying PharmacoDI/build_synonym_tables.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,750 copying PharmacoDI/read_pset.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,754 copying PharmacoDI/get_chembl_compound_targets.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,759 copying PharmacoDI/download_gene_signatures.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,765 copying PharmacoDI/get_chembl_targets.py -> build/lib/PharmacoDI 2021-07-30T19:00:00,785 installing to build/bdist.linux-armv7l/wheel 2021-07-30T19:00:00,786 running install 2021-07-30T19:00:00,788 running install_lib 2021-07-30T19:00:00,795 creating build/bdist.linux-armv7l 2021-07-30T19:00:00,796 creating build/bdist.linux-armv7l/wheel 2021-07-30T19:00:00,800 creating build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,803 copying build/lib/PharmacoDI/download_psets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,807 copying build/lib/PharmacoDI/build_primary_pset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,812 copying build/lib/PharmacoDI/map_genes_to_genomic_coordinates.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,816 copying build/lib/PharmacoDI/build_gene_compound_tissue_dataset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,820 copying build/lib/PharmacoDI/build_experiment_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,827 copying build/lib/PharmacoDI/build_clinical_trial_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,833 copying build/lib/PharmacoDI/build_meta_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,840 copying build/lib/PharmacoDI/build_all_pset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,846 copying build/lib/PharmacoDI/get_target_annotations.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,852 copying build/lib/PharmacoDI/build_dataset_join_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,857 copying build/lib/PharmacoDI/download_canonical_psets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,863 copying build/lib/PharmacoDI/get_gene_targets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,868 copying build/lib/PharmacoDI/build_target_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,875 copying build/lib/PharmacoDI/__init__.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,880 copying build/lib/PharmacoDI/build_cellosaurus.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,886 copying build/lib/PharmacoDI/write_pset_table.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,891 copying build/lib/PharmacoDI/combine_pset_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,899 copying build/lib/PharmacoDI/build_synonym_tables.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,906 copying build/lib/PharmacoDI/read_pset.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,910 copying build/lib/PharmacoDI/get_chembl_compound_targets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,915 copying build/lib/PharmacoDI/download_gene_signatures.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,919 copying build/lib/PharmacoDI/get_chembl_targets.py -> build/bdist.linux-armv7l/wheel/PharmacoDI 2021-07-30T19:00:00,923 running install_egg_info 2021-07-30T19:00:00,976 running egg_info 2021-07-30T19:00:00,977 writing top-level names to PharmacoDI.egg-info/top_level.txt 2021-07-30T19:00:00,980 writing dependency_links to PharmacoDI.egg-info/dependency_links.txt 2021-07-30T19:00:00,982 writing requirements to PharmacoDI.egg-info/requires.txt 2021-07-30T19:00:00,986 writing PharmacoDI.egg-info/PKG-INFO 2021-07-30T19:00:00,999 reading manifest file 'PharmacoDI.egg-info/SOURCES.txt' 2021-07-30T19:00:01,004 reading manifest template 'MANIFEST.in' 2021-07-30T19:00:01,037 warning: no previously-included files matching '*' found under directory 'data' 2021-07-30T19:00:01,039 warning: no previously-included files matching '*' found under directory 'scripts' 2021-07-30T19:00:01,041 warning: no previously-included files matching '*' found under directory 'dist' 2021-07-30T19:00:01,051 writing manifest file 'PharmacoDI.egg-info/SOURCES.txt' 2021-07-30T19:00:01,054 Copying PharmacoDI.egg-info to build/bdist.linux-armv7l/wheel/PharmacoDI-0.0.9-py3.5.egg-info 2021-07-30T19:00:01,086 running install_scripts 2021-07-30T19:00:01,307 creating build/bdist.linux-armv7l/wheel/PharmacoDI-0.0.9.dist-info/WHEEL 2021-07-30T19:00:01,619 Building wheel for pharmacodi (setup.py): finished with status 'done' 2021-07-30T19:00:01,625 Created wheel for pharmacodi: filename=PharmacoDI-0.0.9-py3-none-any.whl size=36632 sha256=acaf802f8b8e9be57b0e9f527f26f552a8c328549f339d2ee0135e54e946e49a 2021-07-30T19:00:01,626 Stored in directory: /tmp/pip-ephem-wheel-cache-r2f6c_g8/wheels/f9/c7/74/6bc401f0cbcaaca83553840f2ba54d3fbec5be524ccf3271c2 2021-07-30T19:00:01,648 Successfully built pharmacodi 2021-07-30T19:00:01,660 Removed build tracker: '/tmp/pip-req-tracker-954tkdvf'