2021-07-31T10:22:00,072 Created temporary directory: /tmp/pip-ephem-wheel-cache-u32or8y3
2021-07-31T10:22:00,078 Created temporary directory: /tmp/pip-req-tracker-004tilz5
2021-07-31T10:22:00,079 Initialized build tracking at /tmp/pip-req-tracker-004tilz5
2021-07-31T10:22:00,079 Created build tracker: /tmp/pip-req-tracker-004tilz5
2021-07-31T10:22:00,080 Entered build tracker: /tmp/pip-req-tracker-004tilz5
2021-07-31T10:22:00,081 Created temporary directory: /tmp/pip-wheel-ci1f573x
2021-07-31T10:22:00,137 WARNING: The index url "/" seems invalid, please provide a scheme.
2021-07-31T10:22:00,138 WARNING: The index url "t" seems invalid, please provide a scheme.
2021-07-31T10:22:00,139 WARNING: The index url "m" seems invalid, please provide a scheme.
2021-07-31T10:22:00,140 WARNING: The index url "p" seems invalid, please provide a scheme.
2021-07-31T10:22:00,140 Looking in indexes: https://pypi.org/simple, /, t, m, p
2021-07-31T10:22:00,143 WARNING: Url '/frag-pele/' is ignored. It is either a non-existing path or lacks a specific scheme.
2021-07-31T10:22:00,144 WARNING: Url 't/frag-pele/' is ignored. It is either a non-existing path or lacks a specific scheme.
2021-07-31T10:22:00,145 WARNING: Url 'm/frag-pele/' is ignored. It is either a non-existing path or lacks a specific scheme.
2021-07-31T10:22:00,145 WARNING: Url 'p/frag-pele/' is ignored. It is either a non-existing path or lacks a specific scheme.
2021-07-31T10:22:00,147 1 location(s) to search for versions of frag-pele:
2021-07-31T10:22:00,147 * https://pypi.org/simple/frag-pele/
2021-07-31T10:22:00,147 Fetching project page and analyzing links: https://pypi.org/simple/frag-pele/
2021-07-31T10:22:00,150 Getting page https://pypi.org/simple/frag-pele/
2021-07-31T10:22:00,154 Found index url https://pypi.org/simple
2021-07-31T10:22:00,413   Found link https://files.pythonhosted.org/packages/04/68/6d6d1e835589a4b25dc8606c3afc9365f6391d2f8deaf20a505280a1d1f4/frag_pele-1.1.0.tar.gz#sha256=dd58277af0db3fa42c95f96b546fcc3b5ea844d36d2626987dd133411f8bf0d3 (from https://pypi.org/simple/frag-pele/), version: 1.1.0
2021-07-31T10:22:00,414   Found link https://files.pythonhosted.org/packages/d0/f0/86387845e4a8f6e60d4a4c22522f839fc3beda80130663bd03382b28a1f4/frag_pele-1.1.0.1.tar.gz#sha256=c489e75d2c39a7d5aebf4c1b62eee5ee379c9de7801588146f19244877117ec0 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.1
2021-07-31T10:22:00,415   Found link https://files.pythonhosted.org/packages/6f/ac/a7720cdad2c4885cb41e28005d05cd1897364e24aa1d2c5ca777e8f74536/frag_pele-1.1.0.2.tar.gz#sha256=a2c7046a9bd88a952d6abcccbee64e400ec6f55cc5e59cd2f929f9bf5f925b36 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.2
2021-07-31T10:22:00,416   Found link https://files.pythonhosted.org/packages/b5/51/ed7816753a4eeed924b5890507ebcfe9a413d63070b08ac248f683cefac2/frag_pele-1.1.0.3.tar.gz#sha256=520f8442ed7f0f9d0508d8cb737fc530584f92af11ccf5de499b756ed5406272 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.3
2021-07-31T10:22:00,417   Found link https://files.pythonhosted.org/packages/61/ea/5ce7db4a2a80a6869779d2aa19a9a3218a25787860ce16c0765e83bb01fe/frag_pele-1.1.0.4.tar.gz#sha256=02eeff856281090a6b00a9f57a887c51dc012936068b74908a6c00ab5109f034 (from https://pypi.org/simple/frag-pele/), version: 1.1.0.4
2021-07-31T10:22:00,418   Found link https://files.pythonhosted.org/packages/ed/d4/6648da9cb9257d09439502d43db14a4942c4d1dd35d40377d4ce46c3c466/frag_pele-2.1.1.tar.gz#sha256=ef6b789f430e2222a5e0627e64b503dd74b4c66f0321e35daeab2d856e314d0a (from https://pypi.org/simple/frag-pele/), version: 2.1.1
2021-07-31T10:22:00,419   Found link https://files.pythonhosted.org/packages/ee/f5/0400b73f5f6be4e6fb5a1792db7698af6084f6930a9abeb89cb1535f1bdd/frag_pele-2.1.2.tar.gz#sha256=625300b3f32c23c7e8a14c263eded89b7adf11893eb85e4718800ee2f9d89a54 (from https://pypi.org/simple/frag-pele/), version: 2.1.2
2021-07-31T10:22:00,420   Found link https://files.pythonhosted.org/packages/90/35/ace23ab99bc3e98a8269a3a3d33e8e717768ff6db75754077efd94323e16/frag_pele-2.1.3.tar.gz#sha256=7411cc49a09a9565a7713d5554d57957e4dc8457361f6f8ba8b5ab53a4bca573 (from https://pypi.org/simple/frag-pele/), version: 2.1.3
2021-07-31T10:22:00,421   Found link https://files.pythonhosted.org/packages/79/a5/050e2ac47772096b1906f154e7c704d2e3d121823fe04772618f4e288289/frag_pele-2.2.1.tar.gz#sha256=2960112e018694cb1ede57429964732a12fe6a485d11ee542ef70d48e650fb37 (from https://pypi.org/simple/frag-pele/), version: 2.2.1
2021-07-31T10:22:00,421   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/4a/93/046a93fe08f3f658c27530aadccb6b6e9e9a1cb25aae99d86940af5adce0/frag_pele-3.0.0-py3-none-any.whl#sha256=1793462d15783e1f0cf560b62550e3dfd2d27b4ee54d8ad026a23114f0386b42 (from https://pypi.org/simple/frag-pele/)
2021-07-31T10:22:00,422   Found link https://files.pythonhosted.org/packages/33/76/a0f81fd6c76ea115357677bb529efebf25ae6b905c2bcccb17a2f6f1718b/frag_pele-3.0.0.tar.gz#sha256=540ee2c709f070752bdebe6cf7af110dd071287a01611bf76a2299be30c2697d (from https://pypi.org/simple/frag-pele/), version: 3.0.0
2021-07-31T10:22:00,423   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/94/4c/1549b7349fec873e2c06fae6013fbcfcb2bd626e06d864b313d01d62d955/frag_pele-3.1.0-py3-none-any.whl#sha256=398507cf87b710bae4a6b7ad57ad77928c05a537c15b4d36d25e7f876a571f30 (from https://pypi.org/simple/frag-pele/)
2021-07-31T10:22:00,424   Found link https://files.pythonhosted.org/packages/5d/e6/51b6246b18f137175acd3ba628369d5608cff0de6b73bba3e8e6cd24a031/frag_pele-3.1.0.tar.gz#sha256=d8ef0d39ae6b71825be83c189253754d68c6307fdfef9633fcc11e4dc5078721 (from https://pypi.org/simple/frag-pele/), version: 3.1.0
2021-07-31T10:22:00,424   Skipping link: No binaries permitted for frag-pele: https://files.pythonhosted.org/packages/16/15/e3132e52417b05a0c88ed42ea62498b2641052cf42e6a42b4d204754c9ae/frag_pele-3.1.1-py3-none-any.whl#sha256=476b2ce89142c0f2b96593cd4d190ba4f7e1918aee7e623a827b6c201041b855 (from https://pypi.org/simple/frag-pele/)
2021-07-31T10:22:00,425   Found link https://files.pythonhosted.org/packages/cc/2d/7ff1c9faf26cf8824380629807559002692ffef0b42dddbc1823b9abc521/frag_pele-3.1.1.tar.gz#sha256=f3d9a1c5858167db0d6d6094175627f5232a531c0dafc06434c2f57e68719e1a (from https://pypi.org/simple/frag-pele/), version: 3.1.1
2021-07-31T10:22:00,460 Given no hashes to check 1 links for project 'frag-pele': discarding no candidates
2021-07-31T10:22:00,492 Collecting frag-pele==3.1.1
2021-07-31T10:22:00,495   Created temporary directory: /tmp/pip-unpack-xcd5aeqg
2021-07-31T10:22:00,576   Downloading frag_pele-3.1.1.tar.gz (162 kB)
2021-07-31T10:22:01,167   Added frag-pele==3.1.1 from https://files.pythonhosted.org/packages/cc/2d/7ff1c9faf26cf8824380629807559002692ffef0b42dddbc1823b9abc521/frag_pele-3.1.1.tar.gz#sha256=f3d9a1c5858167db0d6d6094175627f5232a531c0dafc06434c2f57e68719e1a to build tracker '/tmp/pip-req-tracker-004tilz5'
2021-07-31T10:22:01,169     Running setup.py (path:/tmp/pip-wheel-ci1f573x/frag-pele_41070f9bc79b42b086b368d1188f2f82/setup.py) egg_info for package frag-pele
2021-07-31T10:22:01,170     Created temporary directory: /tmp/pip-pip-egg-info-6zuqni58
2021-07-31T10:22:01,171     Running command python setup.py egg_info
2021-07-31T10:22:04,453     running egg_info
2021-07-31T10:22:04,460     creating /tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info
2021-07-31T10:22:04,465     writing /tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/PKG-INFO
2021-07-31T10:22:04,471     writing top-level names to /tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/top_level.txt
2021-07-31T10:22:04,474     writing requirements to /tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/requires.txt
2021-07-31T10:22:04,478     writing dependency_links to /tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/dependency_links.txt
2021-07-31T10:22:04,482     writing manifest file '/tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/SOURCES.txt'
2021-07-31T10:22:04,876     reading manifest file '/tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/SOURCES.txt'
2021-07-31T10:22:04,880     reading manifest template 'MANIFEST.in'
2021-07-31T10:22:04,887     warning: no files found matching 'frag_pele/AdaptivePELE_repo/AdaptivePELE/atomset/*'
2021-07-31T10:22:04,898     writing manifest file '/tmp/pip-pip-egg-info-6zuqni58/frag_pele.egg-info/SOURCES.txt'
2021-07-31T10:22:05,135   Source in /tmp/pip-wheel-ci1f573x/frag-pele_41070f9bc79b42b086b368d1188f2f82 has version 3.1.1, which satisfies requirement frag-pele==3.1.1 from https://files.pythonhosted.org/packages/cc/2d/7ff1c9faf26cf8824380629807559002692ffef0b42dddbc1823b9abc521/frag_pele-3.1.1.tar.gz#sha256=f3d9a1c5858167db0d6d6094175627f5232a531c0dafc06434c2f57e68719e1a
2021-07-31T10:22:05,137   Removed frag-pele==3.1.1 from https://files.pythonhosted.org/packages/cc/2d/7ff1c9faf26cf8824380629807559002692ffef0b42dddbc1823b9abc521/frag_pele-3.1.1.tar.gz#sha256=f3d9a1c5858167db0d6d6094175627f5232a531c0dafc06434c2f57e68719e1a from build tracker '/tmp/pip-req-tracker-004tilz5'
2021-07-31T10:22:05,145 Created temporary directory: /tmp/pip-unpack-km76wa7u
2021-07-31T10:22:05,146 Building wheels for collected packages: frag-pele
2021-07-31T10:22:05,154   Created temporary directory: /tmp/pip-wheel-zllryeuq
2021-07-31T10:22:05,155   Building wheel for frag-pele (setup.py): started
2021-07-31T10:22:05,156   Destination directory: /tmp/pip-wheel-zllryeuq
2021-07-31T10:22:05,157   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ci1f573x/frag-pele_41070f9bc79b42b086b368d1188f2f82/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ci1f573x/frag-pele_41070f9bc79b42b086b368d1188f2f82/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zllryeuq
2021-07-31T10:22:08,321   running bdist_wheel
2021-07-31T10:22:08,331   running build
2021-07-31T10:22:08,332   running build_py
2021-07-31T10:22:08,706   creating build
2021-07-31T10:22:08,707   creating build/lib
2021-07-31T10:22:08,708   creating build/lib/frag_pele
2021-07-31T10:22:08,710   copying frag_pele/__init__.py -> build/lib/frag_pele
2021-07-31T10:22:08,715   copying frag_pele/main.py -> build/lib/frag_pele
2021-07-31T10:22:08,725   copying frag_pele/constants.py -> build/lib/frag_pele
2021-07-31T10:22:08,731   copying frag_pele/serie_handler.py -> build/lib/frag_pele
2021-07-31T10:22:08,739   creating build/lib/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:08,742   copying frag_pele/PlopRotTemp_S_2017/__init__.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:08,747   copying frag_pele/PlopRotTemp_S_2017/main.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:08,752   copying frag_pele/PlopRotTemp_S_2017/ligand_prep.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:08,756   copying frag_pele/PlopRotTemp_S_2017/PlopRotTemp.py -> build/lib/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:08,777   creating build/lib/frag_pele/Helpers
2021-07-31T10:22:08,779   copying frag_pele/Helpers/plop_rot_temp.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,785   copying frag_pele/Helpers/__init__.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,789   copying frag_pele/Helpers/center_of_mass.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,793   copying frag_pele/Helpers/templatize.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,797   copying frag_pele/Helpers/folder_handler.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,801   copying frag_pele/Helpers/constraints.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,805   copying frag_pele/Helpers/find_dihedrals.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,811   copying frag_pele/Helpers/clusterizer.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,816   copying frag_pele/Helpers/checker.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,822   copying frag_pele/Helpers/correct_fragment_names.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,827   copying frag_pele/Helpers/helpers.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,831   copying frag_pele/Helpers/check_constants.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,834   copying frag_pele/Helpers/create_templates.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,839   copying frag_pele/Helpers/runner.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,844   copying frag_pele/Helpers/conda_deploy.py -> build/lib/frag_pele/Helpers
2021-07-31T10:22:08,850   creating build/lib/frag_pele/Covalent
2021-07-31T10:22:08,852   copying frag_pele/Covalent/__init__.py -> build/lib/frag_pele/Covalent
2021-07-31T10:22:08,856   copying frag_pele/Covalent/correct_pdb_to_covalent_res.py -> build/lib/frag_pele/Covalent
2021-07-31T10:22:08,863   copying frag_pele/Covalent/prepare_pdb_to_cov_heteroatom.py -> build/lib/frag_pele/Covalent
2021-07-31T10:22:08,869   copying frag_pele/Covalent/correct_rotamer_library.py -> build/lib/frag_pele/Covalent
2021-07-31T10:22:08,873   copying frag_pele/Covalent/correct_template_of_backbone_res.py -> build/lib/frag_pele/Covalent
2021-07-31T10:22:08,877   copying frag_pele/Covalent/pdb_corrector.py -> build/lib/frag_pele/Covalent
2021-07-31T10:22:08,883   creating build/lib/frag_pele/Growing
2021-07-31T10:22:08,885   copying frag_pele/Growing/__init__.py -> build/lib/frag_pele/Growing
2021-07-31T10:22:08,888   copying frag_pele/Growing/template_fragmenter.py -> build/lib/frag_pele/Growing
2021-07-31T10:22:08,899   copying frag_pele/Growing/add_fragment_from_pdbs.py -> build/lib/frag_pele/Growing
2021-07-31T10:22:08,909   copying frag_pele/Growing/simulations_linker.py -> build/lib/frag_pele/Growing
2021-07-31T10:22:08,914   copying frag_pele/Growing/template_selector.py -> build/lib/frag_pele/Growing
2021-07-31T10:22:08,918   copying frag_pele/Growing/bestStructs.py -> build/lib/frag_pele/Growing
2021-07-31T10:22:08,924   creating build/lib/frag_pele/Banner
2021-07-31T10:22:08,925   copying frag_pele/Banner/__init__.py -> build/lib/frag_pele/Banner
2021-07-31T10:22:08,928   copying frag_pele/Banner/Detector.py -> build/lib/frag_pele/Banner
2021-07-31T10:22:08,937   creating build/lib/frag_pele/Analysis
2021-07-31T10:22:08,939   copying frag_pele/Analysis/output_files.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,944   copying frag_pele/Analysis/__init__.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,949   copying frag_pele/Analysis/backtrackFragTrajectory.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,954   copying frag_pele/Analysis/forcefield_analysis.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,958   copying frag_pele/Analysis/compute_atom_atom_distance.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,962   copying frag_pele/Analysis/sidecahins_analyser.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,967   copying frag_pele/Analysis/rmsd_computer.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,973   copying frag_pele/Analysis/interaction_detector.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,979   copying frag_pele/Analysis/get_plots.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,987   copying frag_pele/Analysis/analyser.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,992   copying frag_pele/Analysis/backtrackConnectivity.py -> build/lib/frag_pele/Analysis
2021-07-31T10:22:08,997   creating build/lib/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:08,999   copying frag_pele/PlopRotTemp_S_2017/template/tmp_helpers.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,003   copying frag_pele/PlopRotTemp_S_2017/template/__init__.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,007   copying frag_pele/PlopRotTemp_S_2017/template/templateBuilder.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,015   copying frag_pele/PlopRotTemp_S_2017/template/chargeHandler.py -> build/lib/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,022   creating build/lib/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,024   copying frag_pele/Growing/AddingFragHelpers/pdb_joiner.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,031   copying frag_pele/Growing/AddingFragHelpers/__init__.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,034   copying frag_pele/Growing/AddingFragHelpers/atom_constants.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,038   copying frag_pele/Growing/AddingFragHelpers/complex_to_prody.py -> build/lib/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,041   running egg_info
2021-07-31T10:22:09,070   writing top-level names to frag_pele.egg-info/top_level.txt
2021-07-31T10:22:09,072   writing dependency_links to frag_pele.egg-info/dependency_links.txt
2021-07-31T10:22:09,075   writing requirements to frag_pele.egg-info/requires.txt
2021-07-31T10:22:09,078   writing frag_pele.egg-info/PKG-INFO
2021-07-31T10:22:09,100   reading manifest file 'frag_pele.egg-info/SOURCES.txt'
2021-07-31T10:22:09,107   reading manifest template 'MANIFEST.in'
2021-07-31T10:22:09,113   warning: no files found matching 'frag_pele/AdaptivePELE_repo/AdaptivePELE/atomset/*'
2021-07-31T10:22:09,127   writing manifest file 'frag_pele.egg-info/SOURCES.txt'
2021-07-31T10:22:09,135   copying frag_pele/log_configure.ini -> build/lib/frag_pele
2021-07-31T10:22:09,140   creating build/lib/frag_pele/Templates
2021-07-31T10:22:09,141   copying frag_pele/Templates/constants.py -> build/lib/frag_pele/Templates
2021-07-31T10:22:09,146   copying frag_pele/Templates/control_covalent.conf -> build/lib/frag_pele/Templates
2021-07-31T10:22:09,151   copying frag_pele/Templates/control_off.conf -> build/lib/frag_pele/Templates
2021-07-31T10:22:09,157   copying frag_pele/Templates/control_template.conf -> build/lib/frag_pele/Templates
2021-07-31T10:22:09,164   creating build/lib/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,166   copying frag_pele/PlopRotTemp_S_2017/param/f14_sgbnp.param -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,174   copying frag_pele/PlopRotTemp_S_2017/param/params.cov -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,192   copying frag_pele/PlopRotTemp_S_2017/param/params.nb -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,200   copying frag_pele/PlopRotTemp_S_2017/param/sgbnp.param -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,208   copying frag_pele/PlopRotTemp_S_2017/param/similarity.param -> build/lib/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,248   installing to build/bdist.linux-armv7l/wheel
2021-07-31T10:22:09,248   running install
2021-07-31T10:22:09,250   running install_lib
2021-07-31T10:22:09,256   creating build/bdist.linux-armv7l
2021-07-31T10:22:09,257   creating build/bdist.linux-armv7l/wheel
2021-07-31T10:22:09,261   creating build/bdist.linux-armv7l/wheel/frag_pele
2021-07-31T10:22:09,263   copying build/lib/frag_pele/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele
2021-07-31T10:22:09,268   creating build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:09,270   copying build/lib/frag_pele/PlopRotTemp_S_2017/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:09,274   copying build/lib/frag_pele/PlopRotTemp_S_2017/main.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:09,280   creating build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,282   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/tmp_helpers.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,287   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,292   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/templateBuilder.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,301   copying build/lib/frag_pele/PlopRotTemp_S_2017/template/chargeHandler.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/template
2021-07-31T10:22:09,306   copying build/lib/frag_pele/PlopRotTemp_S_2017/ligand_prep.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:09,313   creating build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,316   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/params.cov -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,334   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/sgbnp.param -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,340   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/similarity.param -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,347   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/f14_sgbnp.param -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,353   copying build/lib/frag_pele/PlopRotTemp_S_2017/param/params.nb -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017/param
2021-07-31T10:22:09,361   copying build/lib/frag_pele/PlopRotTemp_S_2017/PlopRotTemp.py -> build/bdist.linux-armv7l/wheel/frag_pele/PlopRotTemp_S_2017
2021-07-31T10:22:09,379   creating build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,381   copying build/lib/frag_pele/Helpers/plop_rot_temp.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,386   copying build/lib/frag_pele/Helpers/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,390   copying build/lib/frag_pele/Helpers/center_of_mass.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,397   copying build/lib/frag_pele/Helpers/templatize.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,402   copying build/lib/frag_pele/Helpers/folder_handler.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,407   copying build/lib/frag_pele/Helpers/constraints.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,412   copying build/lib/frag_pele/Helpers/find_dihedrals.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,417   copying build/lib/frag_pele/Helpers/clusterizer.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,421   copying build/lib/frag_pele/Helpers/checker.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,426   copying build/lib/frag_pele/Helpers/correct_fragment_names.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,430   copying build/lib/frag_pele/Helpers/helpers.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,434   copying build/lib/frag_pele/Helpers/check_constants.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,437   copying build/lib/frag_pele/Helpers/create_templates.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,442   copying build/lib/frag_pele/Helpers/runner.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,447   copying build/lib/frag_pele/Helpers/conda_deploy.py -> build/bdist.linux-armv7l/wheel/frag_pele/Helpers
2021-07-31T10:22:09,453   copying build/lib/frag_pele/main.py -> build/bdist.linux-armv7l/wheel/frag_pele
2021-07-31T10:22:09,467   creating build/bdist.linux-armv7l/wheel/frag_pele/Templates
2021-07-31T10:22:09,469   copying build/lib/frag_pele/Templates/constants.py -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2021-07-31T10:22:09,473   copying build/lib/frag_pele/Templates/control_off.conf -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2021-07-31T10:22:09,478   copying build/lib/frag_pele/Templates/control_covalent.conf -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2021-07-31T10:22:09,482   copying build/lib/frag_pele/Templates/control_template.conf -> build/bdist.linux-armv7l/wheel/frag_pele/Templates
2021-07-31T10:22:09,487   copying build/lib/frag_pele/constants.py -> build/bdist.linux-armv7l/wheel/frag_pele
2021-07-31T10:22:09,494   creating build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,496   copying build/lib/frag_pele/Covalent/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,501   copying build/lib/frag_pele/Covalent/correct_pdb_to_covalent_res.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,507   copying build/lib/frag_pele/Covalent/prepare_pdb_to_cov_heteroatom.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,513   copying build/lib/frag_pele/Covalent/correct_rotamer_library.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,517   copying build/lib/frag_pele/Covalent/correct_template_of_backbone_res.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,521   copying build/lib/frag_pele/Covalent/pdb_corrector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Covalent
2021-07-31T10:22:09,527   creating build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,529   copying build/lib/frag_pele/Growing/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,535   creating build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,538   copying build/lib/frag_pele/Growing/AddingFragHelpers/pdb_joiner.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,545   copying build/lib/frag_pele/Growing/AddingFragHelpers/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,550   copying build/lib/frag_pele/Growing/AddingFragHelpers/atom_constants.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,554   copying build/lib/frag_pele/Growing/AddingFragHelpers/complex_to_prody.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing/AddingFragHelpers
2021-07-31T10:22:09,558   copying build/lib/frag_pele/Growing/template_fragmenter.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,567   copying build/lib/frag_pele/Growing/add_fragment_from_pdbs.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,577   copying build/lib/frag_pele/Growing/simulations_linker.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,583   copying build/lib/frag_pele/Growing/template_selector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,589   copying build/lib/frag_pele/Growing/bestStructs.py -> build/bdist.linux-armv7l/wheel/frag_pele/Growing
2021-07-31T10:22:09,597   creating build/bdist.linux-armv7l/wheel/frag_pele/Banner
2021-07-31T10:22:09,599   copying build/lib/frag_pele/Banner/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Banner
2021-07-31T10:22:09,604   copying build/lib/frag_pele/Banner/Detector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Banner
2021-07-31T10:22:09,610   copying build/lib/frag_pele/serie_handler.py -> build/bdist.linux-armv7l/wheel/frag_pele
2021-07-31T10:22:09,616   creating build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,618   copying build/lib/frag_pele/Analysis/output_files.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,622   copying build/lib/frag_pele/Analysis/__init__.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,626   copying build/lib/frag_pele/Analysis/backtrackFragTrajectory.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,630   copying build/lib/frag_pele/Analysis/forcefield_analysis.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,637   copying build/lib/frag_pele/Analysis/compute_atom_atom_distance.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,642   copying build/lib/frag_pele/Analysis/sidecahins_analyser.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,649   copying build/lib/frag_pele/Analysis/rmsd_computer.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,656   copying build/lib/frag_pele/Analysis/interaction_detector.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,663   copying build/lib/frag_pele/Analysis/get_plots.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,670   copying build/lib/frag_pele/Analysis/analyser.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,676   copying build/lib/frag_pele/Analysis/backtrackConnectivity.py -> build/bdist.linux-armv7l/wheel/frag_pele/Analysis
2021-07-31T10:22:09,682   copying build/lib/frag_pele/log_configure.ini -> build/bdist.linux-armv7l/wheel/frag_pele
2021-07-31T10:22:09,687   running install_egg_info
2021-07-31T10:22:09,709   Copying frag_pele.egg-info to build/bdist.linux-armv7l/wheel/frag_pele-3.1.1-py3.5.egg-info
2021-07-31T10:22:09,735   running install_scripts
2021-07-31T10:22:09,954   creating build/bdist.linux-armv7l/wheel/frag_pele-3.1.1.dist-info/WHEEL
2021-07-31T10:22:10,652   Building wheel for frag-pele (setup.py): finished with status 'done'
2021-07-31T10:22:10,659   Created wheel for frag-pele: filename=frag_pele-3.1.1-py3-none-any.whl size=185630 sha256=a36f94ff40e24eb6335bebdcdb7dfdc7ccff725ccf542f2972162d336ea4458e
2021-07-31T10:22:10,662   Stored in directory: /tmp/pip-ephem-wheel-cache-u32or8y3/wheels/aa/9e/06/c2df7ab28dc7c6fe3e3c5055aba91dbb6cbfae2ce48b23dc55
2021-07-31T10:22:10,684 Successfully built frag-pele
2021-07-31T10:22:10,721 Removed build tracker: '/tmp/pip-req-tracker-004tilz5'