2021-08-13T07:12:37,016 Created temporary directory: /tmp/pip-ephem-wheel-cache-8_1a2bf3 2021-08-13T07:12:37,023 Created temporary directory: /tmp/pip-req-tracker-r79nnrrq 2021-08-13T07:12:37,024 Initialized build tracking at /tmp/pip-req-tracker-r79nnrrq 2021-08-13T07:12:37,025 Created build tracker: /tmp/pip-req-tracker-r79nnrrq 2021-08-13T07:12:37,025 Entered build tracker: /tmp/pip-req-tracker-r79nnrrq 2021-08-13T07:12:37,027 Created temporary directory: /tmp/pip-wheel-xm2s7d8n 2021-08-13T07:12:37,083 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-08-13T07:12:37,087 2 location(s) to search for versions of biobb-adapters: 2021-08-13T07:12:37,087 * https://pypi.org/simple/biobb-adapters/ 2021-08-13T07:12:37,087 * https://www.piwheels.org/simple/biobb-adapters/ 2021-08-13T07:12:37,087 Fetching project page and analyzing links: https://pypi.org/simple/biobb-adapters/ 2021-08-13T07:12:37,090 Getting page https://pypi.org/simple/biobb-adapters/ 2021-08-13T07:12:37,094 Found index url https://pypi.org/simple 2021-08-13T07:12:37,437 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/6e/48/fa9f1781406343cda29442d0ad67f8fa113f3661c8a62ae599a225e559d6/biobb_adapters-0.0.1-py3-none-any.whl#sha256=cf710e8eb6bc1256248c69baea53ce2727fc707766e31bcf25fc9b9cfe66745a (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,439 Found link https://files.pythonhosted.org/packages/ea/47/5763ae5620f550174e112f8231676887f996c7c7bdacb854a46860abf447/biobb_adapters-0.0.1.tar.gz#sha256=545d7bcf2f0803ff36398ae916f00bc3269fd797ecaac95b0a8de07563b3e749 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.0.1 2021-08-13T07:12:37,440 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/0f/61/dc32b2bcfb9b1d1c8d79dc96d32671a901cd83acd1b6184772cdef43c920/biobb_adapters-0.1.2-py3-none-any.whl#sha256=0acb06de199e0ac06376a0ffe5e2071445ee7a36fce431a17edc27fdf218492d (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,442 Found link https://files.pythonhosted.org/packages/3e/05/6809d3f7ea93db6f0bceb198539299a5e33e6315b666d04e6e57568e7f11/biobb_adapters-0.1.2.tar.gz#sha256=bd7717b1f8a51d2fa7197e1291cc73be9ee6f5acd4352c82635a517d16df219f (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.1.2 2021-08-13T07:12:37,443 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/d8/34/06237256a2caa148311d8093a3f71206668f61b7cd20799b8ecf6563cbce/biobb_adapters-0.1.3-py3-none-any.whl#sha256=3d9b62abc78a28b54c050954fd6ee0e3a1fed164a3d3b8d6eadadd0b25b775d2 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,445 Found link https://files.pythonhosted.org/packages/cf/8d/f1da413a4007f55934dff4375e5d87d0b0f8fb7d84c1062157948f4392c9/biobb_adapters-0.1.3.tar.gz#sha256=a3d7a091a9ccb883339a5095a1099a0b5e085833e85c7d4c100ffcbf82155777 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.1.3 2021-08-13T07:12:37,445 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/10/82/a1f366057fb6d101117ace12799cda70ce00ea9c76277d2c8e08e2fafc14/biobb_adapters-0.1.4-py3-none-any.whl#sha256=f26f2aaffd33d22a606ba569276dcfd04bce56a2e8ab8e382acc2646b01f3a85 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,447 Found link https://files.pythonhosted.org/packages/fc/71/7d6174c4c56a7b38322a5a99c1d72c4f6b1115106508a887fbbda63e30d4/biobb_adapters-0.1.4.tar.gz#sha256=7b19e009f69f9f9f3a292ba235dcee790f7e0da435365d4f8f19a63910b7c6d4 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.1.4 2021-08-13T07:12:37,448 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/af/fd/491ede12a15215794041755b568998a5ff3e8c2e1e8df7b5cec044dcdc6e/biobb_adapters-3.6.0-py3-none-any.whl#sha256=deec3d977dc1d2088be8a28197d1bd98650e1baba87d45b5d2ef7fed41fa671c (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,449 Found link https://files.pythonhosted.org/packages/d4/8e/89622b96a2f6255ba0313fb1eaf264343e3c7c1c2e2bcbb0544b990d32bc/biobb_adapters-3.6.0.tar.gz#sha256=912dfc9f49bf587955a8ac0f90907ccb8c2384a4922ef561cb4b2521771d2277 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 3.6.0 2021-08-13T07:12:37,450 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/76/dc/444595a3497f5b5e9220cfb8c683abb044a799aa63249e69fa1c8c46c51b/biobb_adapters-3.6.1-py3-none-any.whl#sha256=1a05b0db6800ac0b68e9219d7a32d56e933c0dbc76ad2d31fbcf25650764ad6c (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,452 Found link https://files.pythonhosted.org/packages/1c/c1/1cb78ece834741799903f6eac3dd0035297ff1c7cbb75f391ec9d5edd95b/biobb_adapters-3.6.1.tar.gz#sha256=b27198ef9d9b4d321bd91c280d40e0fa8cf1b8660e6eb7e9fa780a7ce1409892 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 3.6.1 2021-08-13T07:12:37,452 Fetching project page and analyzing links: https://www.piwheels.org/simple/biobb-adapters/ 2021-08-13T07:12:37,453 Getting page https://www.piwheels.org/simple/biobb-adapters/ 2021-08-13T07:12:37,456 Found index url https://www.piwheels.org/simple 2021-08-13T07:12:37,628 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.0.1-py3-none-any.whl#sha256=cf710e8eb6bc1256248c69baea53ce2727fc707766e31bcf25fc9b9cfe66745a (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,629 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.1.2-py3-none-any.whl#sha256=0acb06de199e0ac06376a0ffe5e2071445ee7a36fce431a17edc27fdf218492d (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,630 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.1.3-py3-none-any.whl#sha256=3d9b62abc78a28b54c050954fd6ee0e3a1fed164a3d3b8d6eadadd0b25b775d2 (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,630 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.1.4-py3-none-any.whl#sha256=f26f2aaffd33d22a606ba569276dcfd04bce56a2e8ab8e382acc2646b01f3a85 (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,631 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-3.6.0-py3-none-any.whl#sha256=deec3d977dc1d2088be8a28197d1bd98650e1baba87d45b5d2ef7fed41fa671c (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-08-13T07:12:37,660 Given no hashes to check 1 links for project 'biobb-adapters': discarding no candidates 2021-08-13T07:12:37,690 Collecting biobb-adapters==3.6.1 2021-08-13T07:12:37,694 Created temporary directory: /tmp/pip-unpack-x3mgn7uq 2021-08-13T07:12:40,973 Downloading biobb_adapters-3.6.1.tar.gz (39.4 MB) 2021-08-13T07:13:08,170 Added biobb-adapters==3.6.1 from https://files.pythonhosted.org/packages/1c/c1/1cb78ece834741799903f6eac3dd0035297ff1c7cbb75f391ec9d5edd95b/biobb_adapters-3.6.1.tar.gz#sha256=b27198ef9d9b4d321bd91c280d40e0fa8cf1b8660e6eb7e9fa780a7ce1409892 to build tracker '/tmp/pip-req-tracker-r79nnrrq' 2021-08-13T07:13:08,172 Running setup.py (path:/tmp/pip-wheel-xm2s7d8n/biobb-adapters_3bdf10efdc314c85bae099c24d59e078/setup.py) egg_info for package biobb-adapters 2021-08-13T07:13:08,174 Created temporary directory: /tmp/pip-pip-egg-info-vz_0_rxq 2021-08-13T07:13:08,175 Running command python setup.py egg_info 2021-08-13T07:13:10,147 running egg_info 2021-08-13T07:13:10,153 creating /tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info 2021-08-13T07:13:10,155 writing dependency_links to /tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/dependency_links.txt 2021-08-13T07:13:10,158 writing requirements to /tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/requires.txt 2021-08-13T07:13:10,160 writing /tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/PKG-INFO 2021-08-13T07:13:10,166 writing top-level names to /tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/top_level.txt 2021-08-13T07:13:10,170 writing manifest file '/tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/SOURCES.txt' 2021-08-13T07:13:10,651 reading manifest file '/tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/SOURCES.txt' 2021-08-13T07:13:10,654 reading manifest template 'MANIFEST.in' 2021-08-13T07:13:11,454 writing manifest file '/tmp/pip-pip-egg-info-vz_0_rxq/biobb_adapters.egg-info/SOURCES.txt' 2021-08-13T07:13:11,590 Source in /tmp/pip-wheel-xm2s7d8n/biobb-adapters_3bdf10efdc314c85bae099c24d59e078 has version 3.6.1, which satisfies requirement biobb-adapters==3.6.1 from https://files.pythonhosted.org/packages/1c/c1/1cb78ece834741799903f6eac3dd0035297ff1c7cbb75f391ec9d5edd95b/biobb_adapters-3.6.1.tar.gz#sha256=b27198ef9d9b4d321bd91c280d40e0fa8cf1b8660e6eb7e9fa780a7ce1409892 2021-08-13T07:13:11,592 Removed biobb-adapters==3.6.1 from https://files.pythonhosted.org/packages/1c/c1/1cb78ece834741799903f6eac3dd0035297ff1c7cbb75f391ec9d5edd95b/biobb_adapters-3.6.1.tar.gz#sha256=b27198ef9d9b4d321bd91c280d40e0fa8cf1b8660e6eb7e9fa780a7ce1409892 from build tracker '/tmp/pip-req-tracker-r79nnrrq' 2021-08-13T07:13:11,604 Created temporary directory: /tmp/pip-unpack-8x7kohvj 2021-08-13T07:13:11,605 Building wheels for collected packages: biobb-adapters 2021-08-13T07:13:11,615 Created temporary directory: /tmp/pip-wheel-wjqj_nb8 2021-08-13T07:13:11,616 Building wheel for biobb-adapters (setup.py): started 2021-08-13T07:13:11,616 Destination directory: /tmp/pip-wheel-wjqj_nb8 2021-08-13T07:13:11,617 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-xm2s7d8n/biobb-adapters_3bdf10efdc314c85bae099c24d59e078/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-xm2s7d8n/biobb-adapters_3bdf10efdc314c85bae099c24d59e078/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wjqj_nb8 2021-08-13T07:13:13,542 running bdist_wheel 2021-08-13T07:13:13,559 running build 2021-08-13T07:13:13,559 running build_py 2021-08-13T07:13:13,901 creating build 2021-08-13T07:13:13,902 creating build/lib 2021-08-13T07:13:13,903 creating build/lib/biobb_adapters 2021-08-13T07:13:13,906 copying biobb_adapters/__init__.py -> build/lib/biobb_adapters 2021-08-13T07:13:13,910 creating build/lib/biobb_adapters/pycompss 2021-08-13T07:13:13,912 copying biobb_adapters/pycompss/__init__.py -> build/lib/biobb_adapters/pycompss 2021-08-13T07:13:13,917 creating build/lib/biobb_adapters/pycompss/biobb_pmx 2021-08-13T07:13:13,918 copying biobb_adapters/pycompss/biobb_pmx/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_pmx 2021-08-13T07:13:13,923 creating build/lib/biobb_adapters/pycompss/biobb_io 2021-08-13T07:13:13,924 copying biobb_adapters/pycompss/biobb_io/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_io 2021-08-13T07:13:13,929 creating build/lib/biobb_adapters/pycompss/biobb_vs 2021-08-13T07:13:13,931 copying biobb_adapters/pycompss/biobb_vs/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs 2021-08-13T07:13:13,935 creating build/lib/biobb_adapters/pycompss/biobb_amber 2021-08-13T07:13:13,937 copying biobb_adapters/pycompss/biobb_amber/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber 2021-08-13T07:13:13,941 creating build/lib/biobb_adapters/pycompss/biobb_commons 2021-08-13T07:13:13,943 copying biobb_adapters/pycompss/biobb_commons/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_commons 2021-08-13T07:13:13,947 copying biobb_adapters/pycompss/biobb_commons/task_config.py -> build/lib/biobb_adapters/pycompss/biobb_commons 2021-08-13T07:13:13,952 creating build/lib/biobb_adapters/pycompss/biobb_model 2021-08-13T07:13:13,953 copying biobb_adapters/pycompss/biobb_model/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_model 2021-08-13T07:13:13,958 creating build/lib/biobb_adapters/pycompss/biobb_md 2021-08-13T07:13:13,959 copying biobb_adapters/pycompss/biobb_md/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_md 2021-08-13T07:13:13,964 creating build/lib/biobb_adapters/pycompss/biobb_ml 2021-08-13T07:13:13,966 copying biobb_adapters/pycompss/biobb_ml/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml 2021-08-13T07:13:13,970 creating build/lib/biobb_adapters/pycompss/biobb_chemistry 2021-08-13T07:13:13,972 copying biobb_adapters/pycompss/biobb_chemistry/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry 2021-08-13T07:13:13,976 creating build/lib/biobb_adapters/pycompss/biobb_analysis 2021-08-13T07:13:13,978 copying biobb_adapters/pycompss/biobb_analysis/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_analysis 2021-08-13T07:13:13,983 creating build/lib/biobb_adapters/pycompss/biobb_structure_utils 2021-08-13T07:13:13,984 copying biobb_adapters/pycompss/biobb_structure_utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils 2021-08-13T07:13:13,989 creating build/lib/biobb_adapters/pycompss/biobb_cmip 2021-08-13T07:13:13,991 copying biobb_adapters/pycompss/biobb_cmip/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_cmip 2021-08-13T07:13:13,996 creating build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:13,998 copying biobb_adapters/pycompss/biobb_pmx/pmx/gentop_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,002 copying biobb_adapters/pycompss/biobb_pmx/pmx/mutate_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,007 copying biobb_adapters/pycompss/biobb_pmx/pmx/pmxmutate.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,011 copying biobb_adapters/pycompss/biobb_pmx/pmx/mutate_bst_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,015 copying biobb_adapters/pycompss/biobb_pmx/pmx/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,018 copying biobb_adapters/pycompss/biobb_pmx/pmx/pmxanalyse.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,022 copying biobb_adapters/pycompss/biobb_pmx/pmx/pmxgentop.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,026 copying biobb_adapters/pycompss/biobb_pmx/pmx/analyse_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:14,033 creating build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,102 copying biobb_adapters/pycompss/biobb_io/api/pdb_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,108 copying biobb_adapters/pycompss/biobb_io/api/pdb_variants_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,114 copying biobb_adapters/pycompss/biobb_io/api/ligand_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,120 copying biobb_adapters/pycompss/biobb_io/api/pdb_variants.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,125 copying biobb_adapters/pycompss/biobb_io/api/pdb.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,129 copying biobb_adapters/pycompss/biobb_io/api/mmcif.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,133 copying biobb_adapters/pycompss/biobb_io/api/drugbank.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,138 copying biobb_adapters/pycompss/biobb_io/api/structure_info.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,142 copying biobb_adapters/pycompss/biobb_io/api/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,145 copying biobb_adapters/pycompss/biobb_io/api/binding_site.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,149 copying biobb_adapters/pycompss/biobb_io/api/ideal_sdf.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,154 copying biobb_adapters/pycompss/biobb_io/api/api_binding_site.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,158 copying biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,162 copying biobb_adapters/pycompss/biobb_io/api/canonical_fasta.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,166 copying biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,171 copying biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_search.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,175 copying biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_list.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,180 copying biobb_adapters/pycompss/biobb_io/api/ligand.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,186 copying biobb_adapters/pycompss/biobb_io/api/memprotmd_sim.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:14,193 creating build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:14,196 copying biobb_adapters/pycompss/biobb_vs/vina/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:14,201 copying biobb_adapters/pycompss/biobb_vs/vina/autodock_vina_run.py -> build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:14,206 copying biobb_adapters/pycompss/biobb_vs/vina/autodock_vina.py -> build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:14,211 creating build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:14,213 copying biobb_adapters/pycompss/biobb_vs/fpocket/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:14,217 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_run.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:14,222 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:14,227 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_filter.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:14,231 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_select.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:14,237 creating build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:14,239 copying biobb_adapters/pycompss/biobb_vs/utils/box.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:14,245 copying biobb_adapters/pycompss/biobb_vs/utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:14,250 copying biobb_adapters/pycompss/biobb_vs/utils/bindingsite.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:14,256 copying biobb_adapters/pycompss/biobb_vs/utils/box_residues.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:14,262 copying biobb_adapters/pycompss/biobb_vs/utils/extract_model_pdbqt.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:14,268 creating build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-08-13T07:13:14,270 copying biobb_adapters/pycompss/biobb_amber/cpptraj/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-08-13T07:13:14,274 copying biobb_adapters/pycompss/biobb_amber/cpptraj/cpptraj_randomize_ions.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-08-13T07:13:14,279 creating build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:14,281 copying biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:14,286 copying biobb_adapters/pycompss/biobb_amber/pdb4amber/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:14,289 copying biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber_run.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:14,295 creating build/lib/biobb_adapters/pycompss/biobb_amber/nab 2021-08-13T07:13:14,297 copying biobb_adapters/pycompss/biobb_amber/nab/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/nab 2021-08-13T07:13:14,301 copying biobb_adapters/pycompss/biobb_amber/nab/nab_build_dna_structure.py -> build/lib/biobb_adapters/pycompss/biobb_amber/nab 2021-08-13T07:13:14,308 creating build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:14,311 copying biobb_adapters/pycompss/biobb_amber/process/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:14,316 copying biobb_adapters/pycompss/biobb_amber/process/process_minout.py -> build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:14,322 copying biobb_adapters/pycompss/biobb_amber/process/process_mdout.py -> build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:14,328 creating build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:14,330 copying biobb_adapters/pycompss/biobb_amber/cphstats/cestats_run.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:14,335 copying biobb_adapters/pycompss/biobb_amber/cphstats/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:14,338 copying biobb_adapters/pycompss/biobb_amber/cphstats/cphstats_run.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:14,344 creating build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:14,346 copying biobb_adapters/pycompss/biobb_amber/parmed/parmed_hmassrepartition.py -> build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:14,351 copying biobb_adapters/pycompss/biobb_amber/parmed/parmed_cpinutil.py -> build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:14,355 copying biobb_adapters/pycompss/biobb_amber/parmed/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:14,360 creating build/lib/biobb_adapters/pycompss/biobb_amber/pmemd 2021-08-13T07:13:14,361 copying biobb_adapters/pycompss/biobb_amber/pmemd/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pmemd 2021-08-13T07:13:14,365 copying biobb_adapters/pycompss/biobb_amber/pmemd/pmemd_mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pmemd 2021-08-13T07:13:14,371 creating build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:14,373 copying biobb_adapters/pycompss/biobb_amber/leap/leap_solvate.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:14,378 copying biobb_adapters/pycompss/biobb_amber/leap/leap_gen_top.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:14,382 copying biobb_adapters/pycompss/biobb_amber/leap/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:14,386 copying biobb_adapters/pycompss/biobb_amber/leap/leap_add_ions.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:14,390 copying biobb_adapters/pycompss/biobb_amber/leap/leap_build_linear_structure.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:14,395 creating build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-08-13T07:13:14,397 copying biobb_adapters/pycompss/biobb_amber/ambpdb/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-08-13T07:13:14,401 copying biobb_adapters/pycompss/biobb_amber/ambpdb/amber_to_pdb.py -> build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-08-13T07:13:14,406 creating build/lib/biobb_adapters/pycompss/biobb_amber/sander 2021-08-13T07:13:14,409 copying biobb_adapters/pycompss/biobb_amber/sander/sander_mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_amber/sander 2021-08-13T07:13:14,413 copying biobb_adapters/pycompss/biobb_amber/sander/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/sander 2021-08-13T07:13:14,418 creating build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,421 copying biobb_adapters/pycompss/biobb_model/model/mutate.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,425 copying biobb_adapters/pycompss/biobb_model/model/mutate_pc.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,429 copying biobb_adapters/pycompss/biobb_model/model/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,433 copying biobb_adapters/pycompss/biobb_model/model/fix_amides.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,437 copying biobb_adapters/pycompss/biobb_model/model/fix_side_chain_pc.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,441 copying biobb_adapters/pycompss/biobb_model/model/fix_chirality.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,446 copying biobb_adapters/pycompss/biobb_model/model/checking_log.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,450 copying biobb_adapters/pycompss/biobb_model/model/fix_backbone.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,455 copying biobb_adapters/pycompss/biobb_model/model/fix_side_chain.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:14,460 creating build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:14,462 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:14,467 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand_pc.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:14,471 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:14,474 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop_pc.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:14,479 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:14,485 creating build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,487 copying biobb_adapters/pycompss/biobb_md/gromacs/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,491 copying biobb_adapters/pycompss/biobb_md/gromacs/genrestr.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,495 copying biobb_adapters/pycompss/biobb_md/gromacs/grompp_mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,500 copying biobb_adapters/pycompss/biobb_md/gromacs/genion.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,504 copying biobb_adapters/pycompss/biobb_md/gromacs/editconf.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,509 copying biobb_adapters/pycompss/biobb_md/gromacs/pdb2gmx.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,513 copying biobb_adapters/pycompss/biobb_md/gromacs/solvate.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,518 copying biobb_adapters/pycompss/biobb_md/gromacs/grompp.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,522 copying biobb_adapters/pycompss/biobb_md/gromacs/gmxselect.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,528 copying biobb_adapters/pycompss/biobb_md/gromacs/make_ndx.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,534 copying biobb_adapters/pycompss/biobb_md/gromacs/mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:14,542 creating build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:14,545 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:14,550 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:14,553 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/principal_component.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:14,558 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_components.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:14,563 creating build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,565 copying biobb_adapters/pycompss/biobb_ml/neural_networks/regression_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,570 copying biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,574 copying biobb_adapters/pycompss/biobb_ml/neural_networks/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,578 copying biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_decode.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,582 copying biobb_adapters/pycompss/biobb_ml/neural_networks/autoencoder_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,587 copying biobb_adapters/pycompss/biobb_ml/neural_networks/classification_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,591 copying biobb_adapters/pycompss/biobb_ml/neural_networks/recurrent_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:14,597 creating build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,599 copying biobb_adapters/pycompss/biobb_ml/classification/random_forest_classifier.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,603 copying biobb_adapters/pycompss/biobb_ml/classification/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,607 copying biobb_adapters/pycompss/biobb_ml/classification/classification_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,611 copying biobb_adapters/pycompss/biobb_ml/classification/decision_tree.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,615 copying biobb_adapters/pycompss/biobb_ml/classification/support_vector_machine.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,620 copying biobb_adapters/pycompss/biobb_ml/classification/k_neighbors_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,624 copying biobb_adapters/pycompss/biobb_ml/classification/k_neighbors.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,629 copying biobb_adapters/pycompss/biobb_ml/classification/logistic_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:14,637 creating build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:14,640 copying biobb_adapters/pycompss/biobb_ml/resampling/oversampling.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:14,645 copying biobb_adapters/pycompss/biobb_ml/resampling/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:14,649 copying biobb_adapters/pycompss/biobb_ml/resampling/resampling.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:14,654 copying biobb_adapters/pycompss/biobb_ml/resampling/undersampling.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:14,660 creating build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,662 copying biobb_adapters/pycompss/biobb_ml/clustering/clustering_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,666 copying biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_clustering.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,671 copying biobb_adapters/pycompss/biobb_ml/clustering/k_means_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,675 copying biobb_adapters/pycompss/biobb_ml/clustering/dbscan.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,679 copying biobb_adapters/pycompss/biobb_ml/clustering/spectral_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,683 copying biobb_adapters/pycompss/biobb_ml/clustering/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,687 copying biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,691 copying biobb_adapters/pycompss/biobb_ml/clustering/k_means.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,695 copying biobb_adapters/pycompss/biobb_ml/clustering/spectral_clustering.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:14,701 creating build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:14,703 copying biobb_adapters/pycompss/biobb_ml/regression/regression_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:14,708 copying biobb_adapters/pycompss/biobb_ml/regression/polynomial_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:14,711 copying biobb_adapters/pycompss/biobb_ml/regression/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:14,715 copying biobb_adapters/pycompss/biobb_ml/regression/linear_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:14,719 copying biobb_adapters/pycompss/biobb_ml/regression/random_forest_regressor.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:14,725 creating build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,727 copying biobb_adapters/pycompss/biobb_ml/utils/scale_columns.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,731 copying biobb_adapters/pycompss/biobb_ml/utils/correlation_matrix.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,735 copying biobb_adapters/pycompss/biobb_ml/utils/dummy_variables.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,739 copying biobb_adapters/pycompss/biobb_ml/utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,743 copying biobb_adapters/pycompss/biobb_ml/utils/drop_columns.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,747 copying biobb_adapters/pycompss/biobb_ml/utils/dendrogram.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,751 copying biobb_adapters/pycompss/biobb_ml/utils/map_variables.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,755 copying biobb_adapters/pycompss/biobb_ml/utils/pairwise_comparison.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:14,761 creating build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,763 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,768 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,772 copying biobb_adapters/pycompss/biobb_chemistry/acpype/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,775 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,779 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,783 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,788 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,792 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,796 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:14,802 creating build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,804 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,808 copying biobb_adapters/pycompss/biobb_chemistry/babelm/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,811 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,816 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,820 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,824 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,828 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,832 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,836 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:14,842 creating build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:14,843 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:14,847 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:14,851 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:14,856 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:14,860 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:14,866 creating build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,868 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,873 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,877 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,882 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,886 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,890 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,894 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,898 copying biobb_adapters/pycompss/biobb_analysis/gromacs/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,902 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,906 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,910 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,915 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,919 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,923 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,927 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,932 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,936 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:14,943 creating build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,946 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,950 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,955 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,959 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,963 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,967 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,972 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,976 copying biobb_adapters/pycompss/biobb_analysis/ambertools/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,980 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,984 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,988 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,993 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:14,999 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,005 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,011 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,016 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,020 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,025 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,029 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,035 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,041 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,047 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,053 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,058 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,062 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:15,070 creating build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,072 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,077 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,082 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,086 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,091 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,096 copying biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structures_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,102 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,108 copying biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structure.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,114 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,118 copying biobb_adapters/pycompss/biobb_structure_utils/utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,122 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,126 copying biobb_adapters/pycompss/biobb_structure_utils/utils/structure_check.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,130 copying biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,135 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_molecule.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,139 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,144 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,148 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,152 copying biobb_adapters/pycompss/biobb_structure_utils/utils/str_check_add_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,158 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,164 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,170 copying biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,176 copying biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,180 copying biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,185 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:15,190 creating build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:15,192 copying biobb_adapters/pycompss/biobb_cmip/cmip/cmip.py -> build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:15,197 copying biobb_adapters/pycompss/biobb_cmip/cmip/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:15,200 copying biobb_adapters/pycompss/biobb_cmip/cmip/titration.py -> build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:15,205 running egg_info 2021-08-13T07:13:15,234 writing dependency_links to biobb_adapters.egg-info/dependency_links.txt 2021-08-13T07:13:15,237 writing requirements to biobb_adapters.egg-info/requires.txt 2021-08-13T07:13:15,239 writing biobb_adapters.egg-info/PKG-INFO 2021-08-13T07:13:15,244 writing top-level names to biobb_adapters.egg-info/top_level.txt 2021-08-13T07:13:15,322 reading manifest file 'biobb_adapters.egg-info/SOURCES.txt' 2021-08-13T07:13:15,359 reading manifest template 'MANIFEST.in' 2021-08-13T07:13:15,942 writing manifest file 'biobb_adapters.egg-info/SOURCES.txt' 2021-08-13T07:13:16,075 creating build/lib/biobb_adapters/cwl 2021-08-13T07:13:16,076 creating build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,078 copying biobb_adapters/cwl/biobb_amber/amber_to_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,084 copying biobb_adapters/cwl/biobb_amber/cpptraj_randomize_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,089 copying biobb_adapters/cwl/biobb_amber/leap_add_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,094 copying biobb_adapters/cwl/biobb_amber/leap_build_linear_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,099 copying biobb_adapters/cwl/biobb_amber/leap_gen_top.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,104 copying biobb_adapters/cwl/biobb_amber/leap_solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,110 copying biobb_adapters/cwl/biobb_amber/nab_build_dna_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,115 copying biobb_adapters/cwl/biobb_amber/parmed_cpinutil.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,119 copying biobb_adapters/cwl/biobb_amber/parmed_hmassrepartition.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,124 copying biobb_adapters/cwl/biobb_amber/pdb4amber.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,129 copying biobb_adapters/cwl/biobb_amber/pmemd_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,135 copying biobb_adapters/cwl/biobb_amber/process_mdout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,140 copying biobb_adapters/cwl/biobb_amber/process_minout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,144 copying biobb_adapters/cwl/biobb_amber/sander_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:16,150 creating build/lib/biobb_adapters/cwl/biobb_amber/ambpdb 2021-08-13T07:13:16,152 copying biobb_adapters/cwl/biobb_amber/ambpdb/amber_to_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/ambpdb 2021-08-13T07:13:16,157 creating build/lib/biobb_adapters/cwl/biobb_amber/cpptraj 2021-08-13T07:13:16,158 copying biobb_adapters/cwl/biobb_amber/cpptraj/cpptraj_randomize_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/cpptraj 2021-08-13T07:13:16,164 creating build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:16,165 copying biobb_adapters/cwl/biobb_amber/leap/leap_add_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:16,171 copying biobb_adapters/cwl/biobb_amber/leap/leap_build_linear_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:16,176 copying biobb_adapters/cwl/biobb_amber/leap/leap_gen_top.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:16,182 copying biobb_adapters/cwl/biobb_amber/leap/leap_solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:16,187 creating build/lib/biobb_adapters/cwl/biobb_amber/nap 2021-08-13T07:13:16,189 copying biobb_adapters/cwl/biobb_amber/nap/nab_build_dna_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/nap 2021-08-13T07:13:16,194 creating build/lib/biobb_adapters/cwl/biobb_amber/parmed 2021-08-13T07:13:16,196 copying biobb_adapters/cwl/biobb_amber/parmed/parmed_cpinutil.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/parmed 2021-08-13T07:13:16,202 copying biobb_adapters/cwl/biobb_amber/parmed/parmed_hmassrepartition.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/parmed 2021-08-13T07:13:16,206 creating build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-08-13T07:13:16,208 copying biobb_adapters/cwl/biobb_amber/pdb4amber/pdb4amber.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-08-13T07:13:16,215 creating build/lib/biobb_adapters/cwl/biobb_amber/pmemd 2021-08-13T07:13:16,217 copying biobb_adapters/cwl/biobb_amber/pmemd/pmemd_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/pmemd 2021-08-13T07:13:16,225 creating build/lib/biobb_adapters/cwl/biobb_amber/process 2021-08-13T07:13:16,228 copying biobb_adapters/cwl/biobb_amber/process/process_mdout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/process 2021-08-13T07:13:16,234 copying biobb_adapters/cwl/biobb_amber/process/process_minout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/process 2021-08-13T07:13:16,239 creating build/lib/biobb_adapters/cwl/biobb_amber/sander 2021-08-13T07:13:16,241 copying biobb_adapters/cwl/biobb_amber/sander/sander_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/sander 2021-08-13T07:13:16,247 creating build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,249 copying biobb_adapters/cwl/biobb_analysis/cpptraj_average.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,254 copying biobb_adapters/cwl/biobb_analysis/cpptraj_bfactor.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,260 copying biobb_adapters/cwl/biobb_analysis/cpptraj_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,265 copying biobb_adapters/cwl/biobb_analysis/cpptraj_dry.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,270 copying biobb_adapters/cwl/biobb_analysis/cpptraj_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,275 copying biobb_adapters/cwl/biobb_analysis/cpptraj_mask.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,282 copying biobb_adapters/cwl/biobb_analysis/cpptraj_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,289 copying biobb_adapters/cwl/biobb_analysis/cpptraj_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,295 copying biobb_adapters/cwl/biobb_analysis/cpptraj_rmsf.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,301 copying biobb_adapters/cwl/biobb_analysis/cpptraj_slice.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,306 copying biobb_adapters/cwl/biobb_analysis/cpptraj_snapshot.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,311 copying biobb_adapters/cwl/biobb_analysis/cpptraj_strip.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,317 copying biobb_adapters/cwl/biobb_analysis/gmx_cluster.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,324 copying biobb_adapters/cwl/biobb_analysis/gmx_energy.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,331 copying biobb_adapters/cwl/biobb_analysis/gmx_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,338 copying biobb_adapters/cwl/biobb_analysis/gmx_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,345 copying biobb_adapters/cwl/biobb_analysis/gmx_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,352 copying biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,359 copying biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str_ens.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,365 copying biobb_adapters/cwl/biobb_analysis/gmx_trjconv_trj.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:16,372 creating build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,374 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_average.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,380 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_bfactor.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,385 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,390 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_dry.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,396 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,403 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_mask.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,410 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,417 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,424 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rmsf.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,431 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_slice.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,438 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_snapshot.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,443 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_strip.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:16,448 creating build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,450 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_cluster.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,456 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_energy.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,462 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,469 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,476 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,482 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,487 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str_ens.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,493 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_trj.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:16,498 creating build/lib/biobb_adapters/cwl/biobb_analysis/test 2021-08-13T07:13:16,500 copying biobb_adapters/cwl/biobb_analysis/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_analysis/test 2021-08-13T07:13:16,508 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,510 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_average.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,517 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_bfactor.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,523 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_convert.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,528 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_dry.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,533 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_image.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,538 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_mask.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,544 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rgyr.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,550 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rms.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,556 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rmsf.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,562 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_slice.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,568 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_snapshot.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,573 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_strip.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:16,578 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/data 2021-08-13T07:13:16,579 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-08-13T07:13:16,582 copying biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.parm.top -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-08-13T07:13:16,990 copying biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.traj.dcd -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-08-13T07:13:17,624 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:17,627 copying biobb_adapters/cwl/biobb_analysis/test/data/gromacs/energy.edr -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:17,634 copying biobb_adapters/cwl/biobb_analysis/test/data/gromacs/topology.tpr -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:17,740 copying biobb_adapters/cwl/biobb_analysis/test/data/gromacs/trajectory.trr -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:18,462 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,465 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_cluster.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,472 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_energy.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,479 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_image.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,486 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rgyr.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,493 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rms.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,500 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,507 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str_ens.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,514 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_trj.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:18,520 creating build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,523 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_ac.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,530 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_cns.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,535 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,541 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx_opls.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,546 copying biobb_adapters/cwl/biobb_chemistry/babel_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,552 copying biobb_adapters/cwl/biobb_chemistry/babel_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,559 copying biobb_adapters/cwl/biobb_chemistry/babel_minimize.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,566 copying biobb_adapters/cwl/biobb_chemistry/babel_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,572 copying biobb_adapters/cwl/biobb_chemistry/reduce_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,577 copying biobb_adapters/cwl/biobb_chemistry/reduce_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:18,582 creating build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:18,583 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_ac.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:18,591 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_cns.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:18,597 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:18,604 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx_opls.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:18,610 creating build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-08-13T07:13:18,612 copying biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-08-13T07:13:18,617 copying biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-08-13T07:13:18,622 creating build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:18,624 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:18,630 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:18,637 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_minimize.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:18,644 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:18,650 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test 2021-08-13T07:13:18,652 copying biobb_adapters/cwl/biobb_chemistry/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_chemistry/test 2021-08-13T07:13:18,657 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:18,659 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_ac.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:18,665 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_cns.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:18,670 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:18,676 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx_opls.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:18,683 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-08-13T07:13:18,686 copying biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_add_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-08-13T07:13:18,692 copying biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_remove_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-08-13T07:13:18,697 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:18,699 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_add_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:18,704 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_convert.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:18,709 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_minimize.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:18,715 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_remove_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:18,722 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data 2021-08-13T07:13:18,723 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-08-13T07:13:18,726 copying biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.mol2 -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-08-13T07:13:18,733 copying biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-08-13T07:13:18,739 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-08-13T07:13:18,741 copying biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-08-13T07:13:18,747 copying biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.no.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-08-13T07:13:18,752 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:18,755 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:18,763 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.minimize.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:18,770 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.no.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:18,776 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.smi -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:18,780 creating build/lib/biobb_adapters/cwl/biobb_cmip 2021-08-13T07:13:18,782 copying biobb_adapters/cwl/biobb_cmip/cmip.cwl -> build/lib/biobb_adapters/cwl/biobb_cmip 2021-08-13T07:13:18,789 copying biobb_adapters/cwl/biobb_cmip/titration.cwl -> build/lib/biobb_adapters/cwl/biobb_cmip 2021-08-13T07:13:18,795 creating build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,797 copying biobb_adapters/cwl/biobb_io/api_binding_site.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,804 copying biobb_adapters/cwl/biobb_io/binding_site.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,811 copying biobb_adapters/cwl/biobb_io/canonical_fasta.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,818 copying biobb_adapters/cwl/biobb_io/drugbank.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,825 copying biobb_adapters/cwl/biobb_io/ideal_sdf.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,832 copying biobb_adapters/cwl/biobb_io/ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,837 copying biobb_adapters/cwl/biobb_io/memprotmd_sim.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,842 copying biobb_adapters/cwl/biobb_io/memprotmd_sim_list.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,847 copying biobb_adapters/cwl/biobb_io/memprotmd_sim_search.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,852 copying biobb_adapters/cwl/biobb_io/mmcif.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,859 copying biobb_adapters/cwl/biobb_io/pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,866 copying biobb_adapters/cwl/biobb_io/pdb_cluster_zip.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,873 copying biobb_adapters/cwl/biobb_io/pdb_variants.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,880 copying biobb_adapters/cwl/biobb_io/structure_info.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:18,886 creating build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,889 copying biobb_adapters/cwl/biobb_io/mmb_api/binding_site.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,897 copying biobb_adapters/cwl/biobb_io/mmb_api/canonical_fasta.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,901 copying biobb_adapters/cwl/biobb_io/mmb_api/drugbank.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,906 copying biobb_adapters/cwl/biobb_io/mmb_api/ideal_sdf.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,911 copying biobb_adapters/cwl/biobb_io/mmb_api/ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,916 copying biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,924 copying biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_list.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,930 copying biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_search.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,937 copying biobb_adapters/cwl/biobb_io/mmb_api/mmcif.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,942 copying biobb_adapters/cwl/biobb_io/mmb_api/pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,947 copying biobb_adapters/cwl/biobb_io/mmb_api/pdb_cluster_zip.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,952 copying biobb_adapters/cwl/biobb_io/mmb_api/pdb_variants.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,957 copying biobb_adapters/cwl/biobb_io/mmb_api/structure_info.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:18,964 creating build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:18,966 copying biobb_adapters/cwl/biobb_md/append_ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:18,973 copying biobb_adapters/cwl/biobb_md/editconf.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:18,980 copying biobb_adapters/cwl/biobb_md/genion.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:18,987 copying biobb_adapters/cwl/biobb_md/genrestr.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:18,994 copying biobb_adapters/cwl/biobb_md/gmxselect.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:18,1000 copying biobb_adapters/cwl/biobb_md/grompp.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,005 copying biobb_adapters/cwl/biobb_md/grompp_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,011 copying biobb_adapters/cwl/biobb_md/make_ndx.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,016 copying biobb_adapters/cwl/biobb_md/mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,023 copying biobb_adapters/cwl/biobb_md/ndx2resttop.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,030 copying biobb_adapters/cwl/biobb_md/pdb2gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,037 copying biobb_adapters/cwl/biobb_md/solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:19,042 creating build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,044 copying biobb_adapters/cwl/biobb_md/gromacs/editconf.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,050 copying biobb_adapters/cwl/biobb_md/gromacs/genion.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,054 copying biobb_adapters/cwl/biobb_md/gromacs/genrestr.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,061 copying biobb_adapters/cwl/biobb_md/gromacs/grompp.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,068 copying biobb_adapters/cwl/biobb_md/gromacs/make_ndx.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,074 copying biobb_adapters/cwl/biobb_md/gromacs/mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,081 copying biobb_adapters/cwl/biobb_md/gromacs/pdb2gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,086 copying biobb_adapters/cwl/biobb_md/gromacs/solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:19,090 creating build/lib/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-08-13T07:13:19,092 copying biobb_adapters/cwl/biobb_md/gromacs_extra/ndx2resttop.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-08-13T07:13:19,098 creating build/lib/biobb_adapters/cwl/biobb_md/test 2021-08-13T07:13:19,100 copying biobb_adapters/cwl/biobb_md/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_md/test 2021-08-13T07:13:19,107 creating build/lib/biobb_adapters/cwl/biobb_md/test/data 2021-08-13T07:13:19,176 creating build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:19,180 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:19,648 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.trr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:19,977 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/editconf.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:19,987 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.tpr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:20,176 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:20,216 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:20,519 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.ndx -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:20,606 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:20,650 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:20,962 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:21,008 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/make_ndx.tpr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:21,779 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/mdrun.tpr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:21,976 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/pyruvate_kinase.pdb -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:22,221 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:22,532 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.trr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:22,859 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:22,872 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:22,915 creating build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-08-13T07:13:22,919 copying biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.ndx -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-08-13T07:13:24,256 copying biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-08-13T07:13:25,171 creating build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,173 copying biobb_adapters/cwl/biobb_md/test/gromacs/editconf.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,179 copying biobb_adapters/cwl/biobb_md/test/gromacs/genion.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,184 copying biobb_adapters/cwl/biobb_md/test/gromacs/genrestr.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,189 copying biobb_adapters/cwl/biobb_md/test/gromacs/grompp.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,194 copying biobb_adapters/cwl/biobb_md/test/gromacs/make_ndx.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,199 copying biobb_adapters/cwl/biobb_md/test/gromacs/mdrun.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,204 copying biobb_adapters/cwl/biobb_md/test/gromacs/pdb2gmx.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,209 copying biobb_adapters/cwl/biobb_md/test/gromacs/solvate.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:25,216 creating build/lib/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-08-13T07:13:25,219 copying biobb_adapters/cwl/biobb_md/test/gromacs_extra/ndx2resttop.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-08-13T07:13:25,225 creating build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,228 copying biobb_adapters/cwl/biobb_ml/agglomerative_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,234 copying biobb_adapters/cwl/biobb_ml/agglomerative_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,239 copying biobb_adapters/cwl/biobb_ml/autoencoder_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,245 copying biobb_adapters/cwl/biobb_ml/classification_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,251 copying biobb_adapters/cwl/biobb_ml/classification_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,258 copying biobb_adapters/cwl/biobb_ml/clustering_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,265 copying biobb_adapters/cwl/biobb_ml/correlation_matrix.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,271 copying biobb_adapters/cwl/biobb_ml/dbscan.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,276 copying biobb_adapters/cwl/biobb_ml/decision_tree.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,282 copying biobb_adapters/cwl/biobb_ml/dendrogram.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,288 copying biobb_adapters/cwl/biobb_ml/drop_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,295 copying biobb_adapters/cwl/biobb_ml/dummy_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,302 copying biobb_adapters/cwl/biobb_ml/k_means.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,309 copying biobb_adapters/cwl/biobb_ml/k_means_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,315 copying biobb_adapters/cwl/biobb_ml/k_neighbors.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,321 copying biobb_adapters/cwl/biobb_ml/k_neighbors_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,326 copying biobb_adapters/cwl/biobb_ml/linear_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,333 copying biobb_adapters/cwl/biobb_ml/logistic_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,341 copying biobb_adapters/cwl/biobb_ml/map_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,349 copying biobb_adapters/cwl/biobb_ml/neural_network_decode.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,354 copying biobb_adapters/cwl/biobb_ml/neural_network_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,360 copying biobb_adapters/cwl/biobb_ml/oversampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,365 copying biobb_adapters/cwl/biobb_ml/pairwise_comparison.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,371 copying biobb_adapters/cwl/biobb_ml/pls_components.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,378 copying biobb_adapters/cwl/biobb_ml/pls_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,385 copying biobb_adapters/cwl/biobb_ml/polynomial_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,392 copying biobb_adapters/cwl/biobb_ml/principal_component.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,398 copying biobb_adapters/cwl/biobb_ml/random_forest_classifier.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,404 copying biobb_adapters/cwl/biobb_ml/random_forest_regressor.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,410 copying biobb_adapters/cwl/biobb_ml/recurrent_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,418 copying biobb_adapters/cwl/biobb_ml/regression_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,425 copying biobb_adapters/cwl/biobb_ml/regression_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,433 copying biobb_adapters/cwl/biobb_ml/resampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,438 copying biobb_adapters/cwl/biobb_ml/scale_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,444 copying biobb_adapters/cwl/biobb_ml/spectral_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,449 copying biobb_adapters/cwl/biobb_ml/spectral_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,456 copying biobb_adapters/cwl/biobb_ml/support_vector_machine.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,464 copying biobb_adapters/cwl/biobb_ml/undersampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:25,471 creating build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,474 copying biobb_adapters/cwl/biobb_ml/classification/classification_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,480 copying biobb_adapters/cwl/biobb_ml/classification/decision_tree.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,486 copying biobb_adapters/cwl/biobb_ml/classification/k_neighbors.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,492 copying biobb_adapters/cwl/biobb_ml/classification/k_neighbors_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,499 copying biobb_adapters/cwl/biobb_ml/classification/logistic_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,508 copying biobb_adapters/cwl/biobb_ml/classification/random_forest_classifier.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,516 copying biobb_adapters/cwl/biobb_ml/classification/support_vector_machine.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:25,521 creating build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,524 copying biobb_adapters/cwl/biobb_ml/clustering/agglomerative_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,530 copying biobb_adapters/cwl/biobb_ml/clustering/agglomerative_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,535 copying biobb_adapters/cwl/biobb_ml/clustering/clustering_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,542 copying biobb_adapters/cwl/biobb_ml/clustering/dbscan.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,550 copying biobb_adapters/cwl/biobb_ml/clustering/k_means.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,557 copying biobb_adapters/cwl/biobb_ml/clustering/k_means_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,562 copying biobb_adapters/cwl/biobb_ml/clustering/spectral_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,568 copying biobb_adapters/cwl/biobb_ml/clustering/spectral_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:25,573 creating build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:25,576 copying biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_components.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:25,584 copying biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:25,591 copying biobb_adapters/cwl/biobb_ml/dimensionality_reduction/principal_component.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:25,597 creating build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,600 copying biobb_adapters/cwl/biobb_ml/neural_networks/autoencoder_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,606 copying biobb_adapters/cwl/biobb_ml/neural_networks/classification_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,612 copying biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_decode.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,619 copying biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,626 copying biobb_adapters/cwl/biobb_ml/neural_networks/recurrent_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,634 copying biobb_adapters/cwl/biobb_ml/neural_networks/regression_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:25,639 creating build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:25,642 copying biobb_adapters/cwl/biobb_ml/regression/linear_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:25,648 copying biobb_adapters/cwl/biobb_ml/regression/polynomial_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:25,654 copying biobb_adapters/cwl/biobb_ml/regression/random_forest_regressor.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:25,661 copying biobb_adapters/cwl/biobb_ml/regression/regression_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:25,668 creating build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:25,671 copying biobb_adapters/cwl/biobb_ml/resampling/oversampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:25,679 copying biobb_adapters/cwl/biobb_ml/resampling/resampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:25,684 copying biobb_adapters/cwl/biobb_ml/resampling/undersampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:25,689 creating build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,691 copying biobb_adapters/cwl/biobb_ml/utils/correlation_matrix.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,697 copying biobb_adapters/cwl/biobb_ml/utils/dendrogram.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,705 copying biobb_adapters/cwl/biobb_ml/utils/drop_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,712 copying biobb_adapters/cwl/biobb_ml/utils/dummy_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,719 copying biobb_adapters/cwl/biobb_ml/utils/map_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,724 copying biobb_adapters/cwl/biobb_ml/utils/pairwise_comparison.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,730 copying biobb_adapters/cwl/biobb_ml/utils/scale_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:25,734 creating build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,737 copying biobb_adapters/cwl/biobb_model/checking_log.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,744 copying biobb_adapters/cwl/biobb_model/fix_amides.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,751 copying biobb_adapters/cwl/biobb_model/fix_backbone.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,758 copying biobb_adapters/cwl/biobb_model/fix_chirality.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,764 copying biobb_adapters/cwl/biobb_model/fix_side_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,769 copying biobb_adapters/cwl/biobb_model/mutate.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:25,774 creating build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,777 copying biobb_adapters/cwl/biobb_model/model/checking_log.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,784 copying biobb_adapters/cwl/biobb_model/model/fix_amides.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,791 copying biobb_adapters/cwl/biobb_model/model/fix_backbone.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,799 copying biobb_adapters/cwl/biobb_model/model/fix_chirality.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,805 copying biobb_adapters/cwl/biobb_model/model/fix_side_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,810 copying biobb_adapters/cwl/biobb_model/model/mutate.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:25,815 creating build/lib/biobb_adapters/cwl/biobb_model/test 2021-08-13T07:13:25,818 copying biobb_adapters/cwl/biobb_model/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_model/test 2021-08-13T07:13:25,824 creating build/lib/biobb_adapters/cwl/biobb_model/test/data 2021-08-13T07:13:25,825 creating build/lib/biobb_adapters/cwl/biobb_model/test/data/model 2021-08-13T07:13:25,829 copying biobb_adapters/cwl/biobb_model/test/data/model/2ki5.pdb -> build/lib/biobb_adapters/cwl/biobb_model/test/data/model 2021-08-13T07:13:25,881 creating build/lib/biobb_adapters/cwl/biobb_model/test/model 2021-08-13T07:13:25,883 copying biobb_adapters/cwl/biobb_model/test/model/fix_side_chain.yml -> build/lib/biobb_adapters/cwl/biobb_model/test/model 2021-08-13T07:13:25,889 copying biobb_adapters/cwl/biobb_model/test/model/mutate.yml -> build/lib/biobb_adapters/cwl/biobb_model/test/model 2021-08-13T07:13:25,893 creating build/lib/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:25,895 copying biobb_adapters/cwl/biobb_pmx/pmxanalyse.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:25,901 copying biobb_adapters/cwl/biobb_pmx/pmxgentop.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:25,908 copying biobb_adapters/cwl/biobb_pmx/pmxmutate.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:25,915 creating build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:25,918 copying biobb_adapters/cwl/biobb_pmx/pmx/pmxanalyse.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:25,926 copying biobb_adapters/cwl/biobb_pmx/pmx/pmxgentop.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:25,933 copying biobb_adapters/cwl/biobb_pmx/pmx/pmxmutate.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:25,940 creating build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,943 copying biobb_adapters/cwl/biobb_structure_utils/cat_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,950 copying biobb_adapters/cwl/biobb_structure_utils/extract_atoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,957 copying biobb_adapters/cwl/biobb_structure_utils/extract_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,964 copying biobb_adapters/cwl/biobb_structure_utils/extract_heteroatoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,971 copying biobb_adapters/cwl/biobb_structure_utils/extract_model.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,978 copying biobb_adapters/cwl/biobb_structure_utils/extract_molecule.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,986 copying biobb_adapters/cwl/biobb_structure_utils/extract_protein.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:25,993 copying biobb_adapters/cwl/biobb_structure_utils/remove_ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:26,000 copying biobb_adapters/cwl/biobb_structure_utils/remove_pdb_water.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:26,008 copying biobb_adapters/cwl/biobb_structure_utils/renumber_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:26,015 copying biobb_adapters/cwl/biobb_structure_utils/sort_gro_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:26,022 copying biobb_adapters/cwl/biobb_structure_utils/str_check_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:26,029 copying biobb_adapters/cwl/biobb_structure_utils/structure_check.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:26,036 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/test 2021-08-13T07:13:26,039 copying biobb_adapters/cwl/biobb_structure_utils/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test 2021-08-13T07:13:26,046 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:26,049 copying biobb_adapters/cwl/biobb_structure_utils/test/data/2vgb.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:26,188 copying biobb_adapters/cwl/biobb_structure_utils/test/data/G2S_stateA_frame92.sorted.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:26,551 copying biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:26,906 copying biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,315 copying biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_WAT.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,358 copying biobb_adapters/cwl/biobb_structure_utils/test/data/cat_ligand.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,365 copying biobb_adapters/cwl/biobb_structure_utils/test/data/cat_protein.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,389 copying biobb_adapters/cwl/biobb_structure_utils/test/data/cl3.noH.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,395 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_chain.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,516 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_heteroatom.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:27,877 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_model.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:28,240 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_protein.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:28,268 copying biobb_adapters/cwl/biobb_structure_utils/test/data/pyruvate.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:28,336 copying biobb_adapters/cwl/biobb_structure_utils/test/data/smallgro.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:28,344 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,349 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/cat_pdb.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,358 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_atoms.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,365 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_chain.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,371 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_heteroatoms.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,377 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_model.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,385 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_protein.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,394 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_ligand.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,402 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_pdb_water.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,408 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/renumber_structure.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,414 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/sort_gro_residues.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:28,420 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,425 copying biobb_adapters/cwl/biobb_structure_utils/utils/cat_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,434 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_atoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,442 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,448 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_heteroatoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,455 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_model.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,461 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_protein.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,469 copying biobb_adapters/cwl/biobb_structure_utils/utils/remove_ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,478 copying biobb_adapters/cwl/biobb_structure_utils/utils/remove_pdb_water.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,486 copying biobb_adapters/cwl/biobb_structure_utils/utils/renumber_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,491 copying biobb_adapters/cwl/biobb_structure_utils/utils/sort_gro_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,497 copying biobb_adapters/cwl/biobb_structure_utils/utils/str_check_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,503 copying biobb_adapters/cwl/biobb_structure_utils/utils/structure_check.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:28,509 creating build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,512 copying biobb_adapters/cwl/biobb_vs/autodock_vina.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,520 copying biobb_adapters/cwl/biobb_vs/autodock_vina_run.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,528 copying biobb_adapters/cwl/biobb_vs/bindingsite.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,535 copying biobb_adapters/cwl/biobb_vs/box.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,542 copying biobb_adapters/cwl/biobb_vs/box_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,549 copying biobb_adapters/cwl/biobb_vs/extract_model_pdbqt.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,557 copying biobb_adapters/cwl/biobb_vs/fpocket.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,564 copying biobb_adapters/cwl/biobb_vs/fpocket_filter.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,571 copying biobb_adapters/cwl/biobb_vs/fpocket_run.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,578 copying biobb_adapters/cwl/biobb_vs/fpocket_select.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,585 creating build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,588 copying biobb_adapters/cwl/biobb_vs/fpocket/fpocket.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,595 copying biobb_adapters/cwl/biobb_vs/fpocket/fpocket_filter.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,603 copying biobb_adapters/cwl/biobb_vs/fpocket/fpocket_select.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,610 creating build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:28,613 copying biobb_adapters/cwl/biobb_vs/utils/bindingsite.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:28,620 copying biobb_adapters/cwl/biobb_vs/utils/box.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:28,627 copying biobb_adapters/cwl/biobb_vs/utils/box_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:28,634 copying biobb_adapters/cwl/biobb_vs/utils/extract_model_pdbqt.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:28,640 creating build/lib/biobb_adapters/cwl/biobb_vs/vina 2021-08-13T07:13:28,643 copying biobb_adapters/cwl/biobb_vs/vina/autodock_vina.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/vina 2021-08-13T07:13:28,726 installing to build/bdist.linux-armv7l/wheel 2021-08-13T07:13:28,727 running install 2021-08-13T07:13:28,729 running install_lib 2021-08-13T07:13:28,737 creating build/bdist.linux-armv7l 2021-08-13T07:13:28,737 creating build/bdist.linux-armv7l/wheel 2021-08-13T07:13:28,741 creating build/bdist.linux-armv7l/wheel/biobb_adapters 2021-08-13T07:13:28,743 copying build/lib/biobb_adapters/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters 2021-08-13T07:13:28,749 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl 2021-08-13T07:13:28,753 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:28,756 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmxanalyse.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:28,762 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmxmutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:28,767 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmxgentop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-08-13T07:13:28,775 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:28,777 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmx/pmxanalyse.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:28,783 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmx/pmxmutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:28,789 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmx/pmxgentop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-08-13T07:13:28,797 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,799 copying build/lib/biobb_adapters/cwl/biobb_io/memprotmd_sim_search.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,807 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,810 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_search.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,816 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/pdb_cluster_zip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,822 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/ideal_sdf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,827 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/mmcif.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,833 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/canonical_fasta.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,838 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/binding_site.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,844 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,850 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,855 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/structure_info.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,859 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/drugbank.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,863 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_list.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,867 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/pdb_variants.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,872 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-08-13T07:13:28,877 copying build/lib/biobb_adapters/cwl/biobb_io/pdb_cluster_zip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,883 copying build/lib/biobb_adapters/cwl/biobb_io/ideal_sdf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,889 copying build/lib/biobb_adapters/cwl/biobb_io/mmcif.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,895 copying build/lib/biobb_adapters/cwl/biobb_io/canonical_fasta.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,899 copying build/lib/biobb_adapters/cwl/biobb_io/binding_site.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,903 copying build/lib/biobb_adapters/cwl/biobb_io/api_binding_site.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,907 copying build/lib/biobb_adapters/cwl/biobb_io/ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,911 copying build/lib/biobb_adapters/cwl/biobb_io/memprotmd_sim.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,916 copying build/lib/biobb_adapters/cwl/biobb_io/structure_info.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,922 copying build/lib/biobb_adapters/cwl/biobb_io/drugbank.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,927 copying build/lib/biobb_adapters/cwl/biobb_io/memprotmd_sim_list.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,933 copying build/lib/biobb_adapters/cwl/biobb_io/pdb_variants.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,938 copying build/lib/biobb_adapters/cwl/biobb_io/pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-08-13T07:13:28,943 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,946 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/vina 2021-08-13T07:13:28,948 copying build/lib/biobb_adapters/cwl/biobb_vs/vina/autodock_vina.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/vina 2021-08-13T07:13:28,953 copying build/lib/biobb_adapters/cwl/biobb_vs/autodock_vina_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,959 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket_filter.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,964 copying build/lib/biobb_adapters/cwl/biobb_vs/box_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,972 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,974 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket/fpocket_filter.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,980 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket/fpocket.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,986 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket/fpocket_select.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-08-13T07:13:28,992 copying build/lib/biobb_adapters/cwl/biobb_vs/bindingsite.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:28,998 copying build/lib/biobb_adapters/cwl/biobb_vs/box.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:29,003 copying build/lib/biobb_adapters/cwl/biobb_vs/autodock_vina.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:29,009 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:29,015 copying build/lib/biobb_adapters/cwl/biobb_vs/extract_model_pdbqt.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:29,021 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:29,028 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:29,031 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/box_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:29,037 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/bindingsite.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:29,043 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/box.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:29,049 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/extract_model_pdbqt.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-08-13T07:13:29,055 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket_select.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-08-13T07:13:29,063 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,065 copying build/lib/biobb_adapters/cwl/biobb_amber/sander_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,073 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed_cpinutil.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,080 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/cpptraj 2021-08-13T07:13:29,082 copying build/lib/biobb_adapters/cwl/biobb_amber/cpptraj/cpptraj_randomize_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/cpptraj 2021-08-13T07:13:29,089 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_gen_top.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,095 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed_hmassrepartition.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,101 copying build/lib/biobb_adapters/cwl/biobb_amber/pmemd_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,108 copying build/lib/biobb_adapters/cwl/biobb_amber/process_mdout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,115 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-08-13T07:13:29,117 copying build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber/pdb4amber.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-08-13T07:13:29,124 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/nap 2021-08-13T07:13:29,126 copying build/lib/biobb_adapters/cwl/biobb_amber/nap/nab_build_dna_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/nap 2021-08-13T07:13:29,131 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/process 2021-08-13T07:13:29,133 copying build/lib/biobb_adapters/cwl/biobb_amber/process/process_mdout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/process 2021-08-13T07:13:29,138 copying build/lib/biobb_adapters/cwl/biobb_amber/process/process_minout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/process 2021-08-13T07:13:29,144 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,150 copying build/lib/biobb_adapters/cwl/biobb_amber/process_minout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,157 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/parmed 2021-08-13T07:13:29,160 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed/parmed_cpinutil.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/parmed 2021-08-13T07:13:29,166 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed/parmed_hmassrepartition.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/parmed 2021-08-13T07:13:29,172 copying build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,178 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_add_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,186 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pmemd 2021-08-13T07:13:29,188 copying build/lib/biobb_adapters/cwl/biobb_amber/pmemd/pmemd_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pmemd 2021-08-13T07:13:29,196 copying build/lib/biobb_adapters/cwl/biobb_amber/nab_build_dna_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,202 copying build/lib/biobb_adapters/cwl/biobb_amber/cpptraj_randomize_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,209 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:29,212 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_gen_top.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:29,219 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:29,225 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_add_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:29,232 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_build_linear_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-08-13T07:13:29,239 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/ambpdb 2021-08-13T07:13:29,241 copying build/lib/biobb_adapters/cwl/biobb_amber/ambpdb/amber_to_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/ambpdb 2021-08-13T07:13:29,246 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_build_linear_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,251 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/sander 2021-08-13T07:13:29,253 copying build/lib/biobb_adapters/cwl/biobb_amber/sander/sander_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/sander 2021-08-13T07:13:29,259 copying build/lib/biobb_adapters/cwl/biobb_amber/amber_to_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-08-13T07:13:29,266 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,268 copying build/lib/biobb_adapters/cwl/biobb_model/checking_log.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,275 copying build/lib/biobb_adapters/cwl/biobb_model/fix_side_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,280 copying build/lib/biobb_adapters/cwl/biobb_model/fix_chirality.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,288 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test 2021-08-13T07:13:29,290 copying build/lib/biobb_adapters/cwl/biobb_model/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test 2021-08-13T07:13:29,298 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/model 2021-08-13T07:13:29,301 copying build/lib/biobb_adapters/cwl/biobb_model/test/model/mutate.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/model 2021-08-13T07:13:29,307 copying build/lib/biobb_adapters/cwl/biobb_model/test/model/fix_side_chain.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/model 2021-08-13T07:13:29,314 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/data 2021-08-13T07:13:29,319 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/data/model 2021-08-13T07:13:29,322 copying build/lib/biobb_adapters/cwl/biobb_model/test/data/model/2ki5.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/data/model 2021-08-13T07:13:29,373 copying build/lib/biobb_adapters/cwl/biobb_model/mutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,379 copying build/lib/biobb_adapters/cwl/biobb_model/fix_backbone.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,387 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,390 copying build/lib/biobb_adapters/cwl/biobb_model/model/checking_log.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,396 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_side_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,402 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_chirality.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,407 copying build/lib/biobb_adapters/cwl/biobb_model/model/mutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,413 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_backbone.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,419 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_amides.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-08-13T07:13:29,424 copying build/lib/biobb_adapters/cwl/biobb_model/fix_amides.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-08-13T07:13:29,432 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:29,434 copying build/lib/biobb_adapters/cwl/biobb_md/grompp.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:29,441 copying build/lib/biobb_adapters/cwl/biobb_md/mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:29,446 copying build/lib/biobb_adapters/cwl/biobb_md/solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:29,452 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test 2021-08-13T07:13:29,454 copying build/lib/biobb_adapters/cwl/biobb_md/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test 2021-08-13T07:13:29,459 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-08-13T07:13:29,461 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs_extra/ndx2resttop.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-08-13T07:13:29,468 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,470 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/genion.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,476 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/editconf.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,482 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/genrestr.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,486 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/solvate.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,490 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/grompp.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,494 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/pdb2gmx.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,498 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/mdrun.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,502 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/make_ndx.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-08-13T07:13:29,508 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data 2021-08-13T07:13:29,512 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-08-13T07:13:29,515 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-08-13T07:13:30,405 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.ndx -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-08-13T07:13:31,714 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:31,716 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:32,017 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.ndx -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:32,102 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:32,402 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.trr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:32,722 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/mdrun.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:32,921 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:33,389 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/make_ndx.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,158 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,201 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,239 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,251 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,293 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,491 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/editconf.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,502 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/pyruvate_kinase.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,744 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:34,784 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:35,097 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.trr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-08-13T07:13:35,430 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-08-13T07:13:35,432 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs_extra/ndx2resttop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-08-13T07:13:35,439 copying build/lib/biobb_adapters/cwl/biobb_md/ndx2resttop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,446 copying build/lib/biobb_adapters/cwl/biobb_md/genrestr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,452 copying build/lib/biobb_adapters/cwl/biobb_md/editconf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,459 copying build/lib/biobb_adapters/cwl/biobb_md/grompp_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,466 copying build/lib/biobb_adapters/cwl/biobb_md/gmxselect.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,473 copying build/lib/biobb_adapters/cwl/biobb_md/append_ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,481 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,483 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/grompp.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,490 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,496 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,502 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/genrestr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,508 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/editconf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,514 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/pdb2gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,520 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/make_ndx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,526 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/genion.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-08-13T07:13:35,532 copying build/lib/biobb_adapters/cwl/biobb_md/pdb2gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,539 copying build/lib/biobb_adapters/cwl/biobb_md/make_ndx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,545 copying build/lib/biobb_adapters/cwl/biobb_md/genion.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-08-13T07:13:35,554 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,557 copying build/lib/biobb_adapters/cwl/biobb_ml/polynomial_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,564 copying build/lib/biobb_adapters/cwl/biobb_ml/k_means.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,570 copying build/lib/biobb_adapters/cwl/biobb_ml/recurrent_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,576 copying build/lib/biobb_adapters/cwl/biobb_ml/k_means_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,582 copying build/lib/biobb_adapters/cwl/biobb_ml/scale_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,587 copying build/lib/biobb_adapters/cwl/biobb_ml/dendrogram.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,593 copying build/lib/biobb_adapters/cwl/biobb_ml/dbscan.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,599 copying build/lib/biobb_adapters/cwl/biobb_ml/k_neighbors.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,606 copying build/lib/biobb_adapters/cwl/biobb_ml/agglomerative_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,612 copying build/lib/biobb_adapters/cwl/biobb_ml/dummy_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,618 copying build/lib/biobb_adapters/cwl/biobb_ml/map_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,624 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_network_decode.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,631 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:35,634 copying build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:35,640 copying build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction/principal_component.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:35,646 copying build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_components.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-08-13T07:13:35,652 copying build/lib/biobb_adapters/cwl/biobb_ml/regression_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,660 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,662 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/recurrent_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,669 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_decode.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,675 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/regression_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,681 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/autoencoder_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,687 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,693 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/classification_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-08-13T07:13:35,699 copying build/lib/biobb_adapters/cwl/biobb_ml/agglomerative_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,705 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,711 copying build/lib/biobb_adapters/cwl/biobb_ml/linear_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,717 copying build/lib/biobb_adapters/cwl/biobb_ml/autoencoder_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,725 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,727 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/k_neighbors.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,733 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/k_neighbors_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,737 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/classification_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,741 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/decision_tree.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,746 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/support_vector_machine.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,752 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/random_forest_classifier.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,758 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/logistic_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-08-13T07:13:35,765 copying build/lib/biobb_adapters/cwl/biobb_ml/k_neighbors_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,772 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:35,774 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling/undersampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:35,780 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling/resampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:35,786 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling/oversampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-08-13T07:13:35,791 copying build/lib/biobb_adapters/cwl/biobb_ml/pls_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,795 copying build/lib/biobb_adapters/cwl/biobb_ml/spectral_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,799 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_network_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,804 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,806 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/k_means.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,812 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/k_means_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,817 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/dbscan.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,823 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/agglomerative_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,829 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/agglomerative_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,833 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/clustering_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,837 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/spectral_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,841 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/spectral_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-08-13T07:13:35,845 copying build/lib/biobb_adapters/cwl/biobb_ml/principal_component.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,850 copying build/lib/biobb_adapters/cwl/biobb_ml/classification_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,855 copying build/lib/biobb_adapters/cwl/biobb_ml/decision_tree.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,862 copying build/lib/biobb_adapters/cwl/biobb_ml/classification_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,867 copying build/lib/biobb_adapters/cwl/biobb_ml/support_vector_machine.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,873 copying build/lib/biobb_adapters/cwl/biobb_ml/regression_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,877 copying build/lib/biobb_adapters/cwl/biobb_ml/pairwise_comparison.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,882 copying build/lib/biobb_adapters/cwl/biobb_ml/correlation_matrix.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,885 copying build/lib/biobb_adapters/cwl/biobb_ml/undersampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,892 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:35,894 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/polynomial_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:35,900 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/linear_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:35,907 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/regression_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:35,913 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/random_forest_regressor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-08-13T07:13:35,919 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,924 copying build/lib/biobb_adapters/cwl/biobb_ml/drop_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,930 copying build/lib/biobb_adapters/cwl/biobb_ml/pls_components.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,936 copying build/lib/biobb_adapters/cwl/biobb_ml/random_forest_classifier.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,942 copying build/lib/biobb_adapters/cwl/biobb_ml/random_forest_regressor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,950 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,952 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/scale_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,959 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/dendrogram.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,964 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/dummy_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,970 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/map_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,974 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/pairwise_comparison.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,978 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/correlation_matrix.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,983 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/drop_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-08-13T07:13:35,987 copying build/lib/biobb_adapters/cwl/biobb_ml/spectral_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,991 copying build/lib/biobb_adapters/cwl/biobb_ml/logistic_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:35,998 copying build/lib/biobb_adapters/cwl/biobb_ml/oversampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-08-13T07:13:36,005 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,008 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_ac.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,014 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,018 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,022 copying build/lib/biobb_adapters/cwl/biobb_chemistry/reduce_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,026 copying build/lib/biobb_adapters/cwl/biobb_chemistry/reduce_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,031 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test 2021-08-13T07:13:36,034 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test 2021-08-13T07:13:36,041 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:36,043 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:36,049 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx_opls.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:36,054 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_ac.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:36,059 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_cns.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-08-13T07:13:36,066 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:36,068 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_convert.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:36,074 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_remove_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:36,078 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_minimize.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:36,083 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_add_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-08-13T07:13:36,088 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-08-13T07:13:36,115 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_add_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-08-13T07:13:36,122 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_remove_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-08-13T07:13:36,131 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data 2021-08-13T07:13:36,136 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-08-13T07:13:36,140 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-08-13T07:13:36,146 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.mol2 -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-08-13T07:13:36,153 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:36,155 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.minimize.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:36,161 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.no.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:36,166 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.smi -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:36,170 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-08-13T07:13:36,177 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-08-13T07:13:36,180 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-08-13T07:13:36,186 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.no.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-08-13T07:13:36,193 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:36,195 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_ac.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:36,201 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:36,206 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_cns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:36,212 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx_opls.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-08-13T07:13:36,218 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:36,221 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:36,228 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_minimize.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:36,235 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:36,242 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-08-13T07:13:36,247 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_minimize.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,252 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,257 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,262 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_cns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,268 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-08-13T07:13:36,271 copying build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-08-13T07:13:36,276 copying build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-08-13T07:13:36,281 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx_opls.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-08-13T07:13:36,288 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:36,291 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:36,296 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_average.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:36,302 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:36,308 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:36,316 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str_ens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:36,324 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test 2021-08-13T07:13:36,326 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test 2021-08-13T07:13:36,333 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,336 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rgyr.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,341 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_energy.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,345 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str_ens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,350 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_image.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,355 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,360 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_cluster.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,365 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_trj.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,370 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-08-13T07:13:36,376 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,379 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rgyr.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,384 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_image.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,388 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_bfactor.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,393 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_slice.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,398 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_convert.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,403 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,408 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_average.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,414 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_dry.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,420 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_snapshot.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,425 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_strip.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,429 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_mask.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,433 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rmsf.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-08-13T07:13:36,438 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data 2021-08-13T07:13:36,441 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:36,443 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs/trajectory.trr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:37,161 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs/topology.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:37,264 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs/energy.edr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-08-13T07:13:37,271 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-08-13T07:13:37,273 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.parm.top -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-08-13T07:13:37,664 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.traj.dcd -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-08-13T07:13:38,280 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,284 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_mask.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,289 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_bfactor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,295 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_slice.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,301 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_strip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,306 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_cluster.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,312 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,318 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_rmsf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,324 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,331 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_trjconv_trj.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,337 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,343 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_dry.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,351 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,353 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,359 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,365 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str_ens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,370 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,374 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_cluster.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,378 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_trj.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,382 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,387 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_energy.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-08-13T07:13:38,393 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_snapshot.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,401 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,403 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,409 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_average.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,413 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_mask.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,417 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_bfactor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,421 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_slice.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,425 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_strip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,431 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,436 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rmsf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,442 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,448 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_dry.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,453 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_snapshot.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,459 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-08-13T07:13:38,465 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,470 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_energy.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-08-13T07:13:38,475 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:38,477 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_molecule.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:38,481 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_protein.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:38,486 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test 2021-08-13T07:13:38,488 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test 2021-08-13T07:13:38,496 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,498 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_model.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,504 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_heteroatoms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,509 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_ligand.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,513 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_pdb_water.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,517 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_chain.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,521 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/cat_pdb.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,524 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/renumber_structure.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,528 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_atoms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,533 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_protein.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,539 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/sort_gro_residues.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-08-13T07:13:38,546 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:38,548 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/cat_protein.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:38,569 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/cl3.noH.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:38,574 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/smallgro.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:38,579 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/2vgb.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:38,717 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_chain.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:38,836 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:39,247 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/G2S_stateA_frame92.sorted.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:39,601 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_protein.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:39,629 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_model.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:39,992 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_heteroatom.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:40,359 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/cat_ligand.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:40,366 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:40,730 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/pyruvate.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:40,796 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_WAT.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-08-13T07:13:40,839 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/str_check_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,844 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/structure_check.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,848 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/remove_pdb_water.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,852 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,858 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_heteroatoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,864 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/remove_ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,870 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/sort_gro_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,876 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_atoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,881 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_model.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,887 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/cat_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,895 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,897 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_protein.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,904 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/str_check_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,909 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/structure_check.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,915 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/remove_pdb_water.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,921 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,926 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_heteroatoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,932 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/remove_ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,937 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/sort_gro_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,943 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_atoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,949 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_model.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,954 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/cat_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,960 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/renumber_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-08-13T07:13:40,966 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/renumber_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-08-13T07:13:40,973 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_cmip 2021-08-13T07:13:40,975 copying build/lib/biobb_adapters/cwl/biobb_cmip/cmip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_cmip 2021-08-13T07:13:40,982 copying build/lib/biobb_adapters/cwl/biobb_cmip/titration.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_cmip 2021-08-13T07:13:40,989 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss 2021-08-13T07:13:40,993 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx 2021-08-13T07:13:40,996 copying build/lib/biobb_adapters/pycompss/biobb_pmx/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx 2021-08-13T07:13:41,002 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,005 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/gentop_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,011 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/mutate_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,016 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/pmxmutate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,020 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/mutate_bst_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,024 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,027 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/pmxanalyse.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,031 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/pmxgentop.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,035 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/analyse_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-08-13T07:13:41,042 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io 2021-08-13T07:13:41,044 copying build/lib/biobb_adapters/pycompss/biobb_io/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io 2021-08-13T07:13:41,051 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,054 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,059 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_variants_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,065 copying build/lib/biobb_adapters/pycompss/biobb_io/api/ligand_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,070 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_variants.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,075 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,080 copying build/lib/biobb_adapters/pycompss/biobb_io/api/mmcif.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,086 copying build/lib/biobb_adapters/pycompss/biobb_io/api/drugbank.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,091 copying build/lib/biobb_adapters/pycompss/biobb_io/api/structure_info.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,096 copying build/lib/biobb_adapters/pycompss/biobb_io/api/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,101 copying build/lib/biobb_adapters/pycompss/biobb_io/api/binding_site.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,106 copying build/lib/biobb_adapters/pycompss/biobb_io/api/ideal_sdf.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,112 copying build/lib/biobb_adapters/pycompss/biobb_io/api/api_binding_site.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,117 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,121 copying build/lib/biobb_adapters/pycompss/biobb_io/api/canonical_fasta.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,125 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,129 copying build/lib/biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_search.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,133 copying build/lib/biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_list.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,137 copying build/lib/biobb_adapters/pycompss/biobb_io/api/ligand.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,143 copying build/lib/biobb_adapters/pycompss/biobb_io/api/memprotmd_sim.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-08-13T07:13:41,150 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs 2021-08-13T07:13:41,154 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:41,157 copying build/lib/biobb_adapters/pycompss/biobb_vs/vina/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:41,162 copying build/lib/biobb_adapters/pycompss/biobb_vs/vina/autodock_vina_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:41,167 copying build/lib/biobb_adapters/pycompss/biobb_vs/vina/autodock_vina.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-08-13T07:13:41,175 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:41,177 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:41,182 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:41,187 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:41,193 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_filter.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:41,198 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_select.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-08-13T07:13:41,204 copying build/lib/biobb_adapters/pycompss/biobb_vs/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs 2021-08-13T07:13:41,210 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:41,212 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/box.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:41,218 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:41,223 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/bindingsite.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:41,228 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/box_residues.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:41,234 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/extract_model_pdbqt.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-08-13T07:13:41,241 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber 2021-08-13T07:13:41,245 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-08-13T07:13:41,247 copying build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-08-13T07:13:41,252 copying build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj/cpptraj_randomize_ions.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-08-13T07:13:41,259 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:41,261 copying build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:41,266 copying build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:41,269 copying build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-08-13T07:13:41,274 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/nab 2021-08-13T07:13:41,276 copying build/lib/biobb_adapters/pycompss/biobb_amber/nab/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/nab 2021-08-13T07:13:41,280 copying build/lib/biobb_adapters/pycompss/biobb_amber/nab/nab_build_dna_structure.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/nab 2021-08-13T07:13:41,285 copying build/lib/biobb_adapters/pycompss/biobb_amber/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber 2021-08-13T07:13:41,291 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:41,293 copying build/lib/biobb_adapters/pycompss/biobb_amber/process/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:41,298 copying build/lib/biobb_adapters/pycompss/biobb_amber/process/process_minout.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:41,303 copying build/lib/biobb_adapters/pycompss/biobb_amber/process/process_mdout.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-08-13T07:13:41,307 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:41,309 copying build/lib/biobb_adapters/pycompss/biobb_amber/cphstats/cestats_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:41,313 copying build/lib/biobb_adapters/pycompss/biobb_amber/cphstats/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:41,317 copying build/lib/biobb_adapters/pycompss/biobb_amber/cphstats/cphstats_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-08-13T07:13:41,322 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:41,325 copying build/lib/biobb_adapters/pycompss/biobb_amber/parmed/parmed_hmassrepartition.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:41,331 copying build/lib/biobb_adapters/pycompss/biobb_amber/parmed/parmed_cpinutil.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:41,336 copying build/lib/biobb_adapters/pycompss/biobb_amber/parmed/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-08-13T07:13:41,342 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pmemd 2021-08-13T07:13:41,344 copying build/lib/biobb_adapters/pycompss/biobb_amber/pmemd/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pmemd 2021-08-13T07:13:41,349 copying build/lib/biobb_adapters/pycompss/biobb_amber/pmemd/pmemd_mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pmemd 2021-08-13T07:13:41,357 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:41,359 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_solvate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:41,364 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_gen_top.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:41,368 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:41,371 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_add_ions.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:41,375 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_build_linear_structure.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-08-13T07:13:41,381 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-08-13T07:13:41,383 copying build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-08-13T07:13:41,389 copying build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb/amber_to_pdb.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-08-13T07:13:41,396 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/sander 2021-08-13T07:13:41,399 copying build/lib/biobb_adapters/pycompss/biobb_amber/sander/sander_mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/sander 2021-08-13T07:13:41,405 copying build/lib/biobb_adapters/pycompss/biobb_amber/sander/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/sander 2021-08-13T07:13:41,411 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_commons 2021-08-13T07:13:41,413 copying build/lib/biobb_adapters/pycompss/biobb_commons/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_commons 2021-08-13T07:13:41,418 copying build/lib/biobb_adapters/pycompss/biobb_commons/task_config.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_commons 2021-08-13T07:13:41,424 copying build/lib/biobb_adapters/pycompss/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss 2021-08-13T07:13:41,430 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model 2021-08-13T07:13:41,432 copying build/lib/biobb_adapters/pycompss/biobb_model/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model 2021-08-13T07:13:41,439 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,441 copying build/lib/biobb_adapters/pycompss/biobb_model/model/mutate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,446 copying build/lib/biobb_adapters/pycompss/biobb_model/model/mutate_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,451 copying build/lib/biobb_adapters/pycompss/biobb_model/model/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,471 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_amides.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,476 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_side_chain_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,482 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_chirality.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,487 copying build/lib/biobb_adapters/pycompss/biobb_model/model/checking_log.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,493 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_backbone.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,498 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_side_chain.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-08-13T07:13:41,505 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md 2021-08-13T07:13:41,506 copying build/lib/biobb_adapters/pycompss/biobb_md/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md 2021-08-13T07:13:41,511 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:41,513 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:41,517 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:41,522 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:41,525 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:41,531 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-08-13T07:13:41,538 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,541 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,545 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/genrestr.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,550 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/grompp_mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,554 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/genion.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,558 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/editconf.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,562 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/pdb2gmx.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,567 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/solvate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,572 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/grompp.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,578 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/gmxselect.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,584 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/make_ndx.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,588 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-08-13T07:13:41,593 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml 2021-08-13T07:13:41,596 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:41,599 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:41,603 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:41,607 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/principal_component.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:41,612 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_components.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-08-13T07:13:41,618 copying build/lib/biobb_adapters/pycompss/biobb_ml/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml 2021-08-13T07:13:41,624 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,626 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/regression_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,631 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,635 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,638 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_decode.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,642 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/autoencoder_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,646 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/classification_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,652 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/recurrent_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-08-13T07:13:41,659 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,662 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/random_forest_classifier.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,668 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,671 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/classification_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,675 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/decision_tree.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,679 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/support_vector_machine.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,683 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/k_neighbors_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,688 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/k_neighbors.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,693 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/logistic_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-08-13T07:13:41,700 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:41,703 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/oversampling.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:41,709 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:41,712 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/resampling.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:41,716 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/undersampling.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-08-13T07:13:41,722 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,723 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/clustering_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,728 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_clustering.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,733 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/k_means_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,739 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/dbscan.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,744 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/spectral_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,750 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,753 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,757 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/k_means.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,761 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/spectral_clustering.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-08-13T07:13:41,767 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:41,769 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/regression_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:41,774 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/polynomial_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:41,780 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:41,784 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/linear_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:41,790 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/random_forest_regressor.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-08-13T07:13:41,795 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,797 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/scale_columns.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,801 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/correlation_matrix.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,805 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/dummy_variables.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,810 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,814 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/drop_columns.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,820 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/dendrogram.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,826 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/map_variables.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,832 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-08-13T07:13:41,839 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry 2021-08-13T07:13:41,841 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry 2021-08-13T07:13:41,848 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,851 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,855 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,859 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,863 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,867 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,871 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,876 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,882 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,888 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-08-13T07:13:41,895 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,897 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,901 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,904 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,908 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,912 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,918 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,923 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,929 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,934 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-08-13T07:13:41,940 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:41,941 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:41,945 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:41,949 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:41,953 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:41,959 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-08-13T07:13:41,966 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis 2021-08-13T07:13:41,969 copying build/lib/biobb_adapters/pycompss/biobb_analysis/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis 2021-08-13T07:13:41,975 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:41,977 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:41,982 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:41,986 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:41,990 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:41,994 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:41,999 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,005 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,011 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,015 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,019 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,023 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,027 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,031 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,035 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,041 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,046 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,052 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-08-13T07:13:42,059 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,061 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,066 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,070 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,074 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,079 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,084 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,090 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,095 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,099 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,103 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,107 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,111 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,115 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,120 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,126 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,131 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,137 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,142 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,146 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,150 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,154 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,159 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,164 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,169 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,175 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-08-13T07:13:42,181 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils 2021-08-13T07:13:42,183 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils 2021-08-13T07:13:42,189 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,191 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,195 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,199 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,205 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,210 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,216 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structures_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,221 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,225 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structure.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,229 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,233 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,237 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,242 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/structure_check.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,249 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,255 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_molecule.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,262 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,266 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,271 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,275 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/str_check_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,279 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,284 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,290 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,296 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,301 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,306 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-08-13T07:13:42,311 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip 2021-08-13T07:13:42,314 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:42,316 copying build/lib/biobb_adapters/pycompss/biobb_cmip/cmip/cmip.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:42,321 copying build/lib/biobb_adapters/pycompss/biobb_cmip/cmip/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:42,326 copying build/lib/biobb_adapters/pycompss/biobb_cmip/cmip/titration.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-08-13T07:13:42,332 copying build/lib/biobb_adapters/pycompss/biobb_cmip/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip 2021-08-13T07:13:42,336 running install_egg_info 2021-08-13T07:13:42,357 Copying biobb_adapters.egg-info to build/bdist.linux-armv7l/wheel/biobb_adapters-3.6.1-py3.5.egg-info 2021-08-13T07:13:42,396 running install_scripts 2021-08-13T07:13:42,593 creating build/bdist.linux-armv7l/wheel/biobb_adapters-3.6.1.dist-info/WHEEL 2021-08-13T07:14:22,040 Building wheel for biobb-adapters (setup.py): finished with status 'done' 2021-08-13T07:14:22,704 Created wheel for biobb-adapters: filename=biobb_adapters-3.6.1-py3-none-any.whl size=40171028 sha256=8260317060e532fea600980ac833bd79b07ac5df283349b573221a8a7c732506 2021-08-13T07:14:22,705 Stored in directory: /tmp/pip-ephem-wheel-cache-8_1a2bf3/wheels/9e/5f/27/39663120b1a19741de916c25fb1034a24e87fdbdc92b44da5a 2021-08-13T07:14:22,803 Successfully built biobb-adapters 2021-08-13T07:14:29,740 Removed build tracker: '/tmp/pip-req-tracker-r79nnrrq'