2021-08-17T14:40:09,613 Created temporary directory: /tmp/pip-ephem-wheel-cache-rzpsv7du
2021-08-17T14:40:09,616 Created temporary directory: /tmp/pip-req-tracker-3znds12u
2021-08-17T14:40:09,616 Initialized build tracking at /tmp/pip-req-tracker-3znds12u
2021-08-17T14:40:09,617 Created build tracker: /tmp/pip-req-tracker-3znds12u
2021-08-17T14:40:09,617 Entered build tracker: /tmp/pip-req-tracker-3znds12u
2021-08-17T14:40:09,618 Created temporary directory: /tmp/pip-wheel-hio4h_o5
2021-08-17T14:40:09,653 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-08-17T14:40:09,656 2 location(s) to search for versions of modbampy:
2021-08-17T14:40:09,656 * https://pypi.org/simple/modbampy/
2021-08-17T14:40:09,656 * https://www.piwheels.org/simple/modbampy/
2021-08-17T14:40:09,657 Fetching project page and analyzing links: https://pypi.org/simple/modbampy/
2021-08-17T14:40:09,657 Getting page https://pypi.org/simple/modbampy/
2021-08-17T14:40:09,659 Found index url https://pypi.org/simple
2021-08-17T14:40:09,751   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/cb/92/01d1ec72f52cd9d18713cfd5c7bb064ea70fe031fe238e265112fcd3beb2/modbampy-0.2.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=46d4c2c5add64b1c7fba490404ff463b777a1d3f57fe0c645aa5c4563f441263 (from https://pypi.org/simple/modbampy/)
2021-08-17T14:40:09,751   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/35/0e/280e5b17b0bc460560075c77da9bd9299b6b7dcb0c061740a94f8b23c90e/modbampy-0.2.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=68b2f71492f7c491ce50d7652b203b4e1acfb5a39bee3d636caa1e812a2bc912 (from https://pypi.org/simple/modbampy/)
2021-08-17T14:40:09,751   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/01/ef/99be5f576ff7db0f873bc7713921bffd2742fc5ccd6ab381f35a99c41854/modbampy-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=52b6a20f924a029863c27bd2b9bb77174f19ae40f77902730d00befdfdd266f0 (from https://pypi.org/simple/modbampy/)
2021-08-17T14:40:09,751   Found link https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 (from https://pypi.org/simple/modbampy/), version: 0.2.1
2021-08-17T14:40:09,752 Fetching project page and analyzing links: https://www.piwheels.org/simple/modbampy/
2021-08-17T14:40:09,752 Getting page https://www.piwheels.org/simple/modbampy/
2021-08-17T14:40:09,753 Found index url https://www.piwheels.org/simple
2021-08-17T14:40:09,895 Skipping link: not a file: https://www.piwheels.org/simple/modbampy/
2021-08-17T14:40:09,895 Skipping link: not a file: https://pypi.org/simple/modbampy/
2021-08-17T14:40:09,916 Given no hashes to check 1 links for project 'modbampy': discarding no candidates
2021-08-17T14:40:09,936 Collecting modbampy==0.2.1
2021-08-17T14:40:09,937   Created temporary directory: /tmp/pip-unpack-tniat7cc
2021-08-17T14:40:09,980   Downloading modbampy-0.2.1.tar.gz (764 kB)
2021-08-17T14:40:10,710   Added modbampy==0.2.1 from https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 to build tracker '/tmp/pip-req-tracker-3znds12u'
2021-08-17T14:40:10,711     Running setup.py (path:/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py) egg_info for package modbampy
2021-08-17T14:40:10,711     Created temporary directory: /tmp/pip-pip-egg-info-pvnf6zxg
2021-08-17T14:40:10,712     Running command python setup.py egg_info
2021-08-17T14:40:11,762     /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-08-17T14:40:11,763       warnings.warn("String literal found in cdef() or type source. "
2021-08-17T14:40:11,910     running egg_info
2021-08-17T14:40:11,913     creating /tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info
2021-08-17T14:40:11,914     writing /tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/PKG-INFO
2021-08-17T14:40:11,917     writing dependency_links to /tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/dependency_links.txt
2021-08-17T14:40:11,919     writing entry points to /tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/entry_points.txt
2021-08-17T14:40:11,920     writing requirements to /tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/requires.txt
2021-08-17T14:40:11,921     writing top-level names to /tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/top_level.txt
2021-08-17T14:40:11,923     writing manifest file '/tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/SOURCES.txt'
2021-08-17T14:40:12,098     reading manifest file '/tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/SOURCES.txt'
2021-08-17T14:40:12,100     reading manifest template 'MANIFEST.in'
2021-08-17T14:40:12,104     warning: no files found matching 'LICENSE.md'
2021-08-17T14:40:12,124     no previously-included directories found matching 'htslib/test'
2021-08-17T14:40:12,125     no previously-included directories found matching 'htslib/htscodecs/tests'
2021-08-17T14:40:12,126     warning: no directories found matching 'images'
2021-08-17T14:40:12,126     no previously-included directories found matching 'build'
2021-08-17T14:40:12,127     no previously-included directories found matching 'docs'
2021-08-17T14:40:12,127     adding license file 'LICENSE'
2021-08-17T14:40:12,138     writing manifest file '/tmp/pip-pip-egg-info-pvnf6zxg/modbampy.egg-info/SOURCES.txt'
2021-08-17T14:40:12,231   Source in /tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7 has version 0.2.1, which satisfies requirement modbampy==0.2.1 from https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11
2021-08-17T14:40:12,233   Removed modbampy==0.2.1 from https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 from build tracker '/tmp/pip-req-tracker-3znds12u'
2021-08-17T14:40:12,237 Created temporary directory: /tmp/pip-unpack-0_i7b5qz
2021-08-17T14:40:12,237 Building wheels for collected packages: modbampy
2021-08-17T14:40:12,243   Created temporary directory: /tmp/pip-wheel-yppugyhv
2021-08-17T14:40:12,243   Building wheel for modbampy (setup.py): started
2021-08-17T14:40:12,244   Destination directory: /tmp/pip-wheel-yppugyhv
2021-08-17T14:40:12,244   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-yppugyhv
2021-08-17T14:40:13,241   /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-08-17T14:40:13,242     warnings.warn("String literal found in cdef() or type source. "
2021-08-17T14:40:13,391   running bdist_wheel
2021-08-17T14:40:13,395   running build
2021-08-17T14:40:13,396   running build_py
2021-08-17T14:40:13,535   creating build
2021-08-17T14:40:13,536   creating build/lib.linux-armv7l-3.9
2021-08-17T14:40:13,536   creating build/lib.linux-armv7l-3.9/modbampy
2021-08-17T14:40:13,537   copying modbampy/__init__.py -> build/lib.linux-armv7l-3.9/modbampy
2021-08-17T14:40:13,540   running build_ext
2021-08-17T14:40:13,541   generating cffi module 'build/temp.linux-armv7l-3.9/libmodbampy.c'
2021-08-17T14:40:13,541   creating build/temp.linux-armv7l-3.9
2021-08-17T14:40:13,563   Compiling htslib using Makefile
2021-08-17T14:40:13,614   Compiling libhts.a
2021-08-17T14:40:13,615   cd htslib/ \
2021-08-17T14:40:13,615   	&& autoheader \
2021-08-17T14:40:13,615   	&& autoconf \
2021-08-17T14:40:13,615   	&& CFLAGS="-fpic -msse3 -O3 -std=c99 " ./configure  \
2021-08-17T14:40:13,616   	&& make -j 4
2021-08-17T14:40:15,972   checking for gcc... gcc
2021-08-17T14:40:16,147   checking whether the C compiler works... no
2021-08-17T14:40:16,159   configure: error: in `/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/htslib':
2021-08-17T14:40:16,160   configure: error: C compiler cannot create executables
2021-08-17T14:40:16,160   See `config.log' for more details
2021-08-17T14:40:16,254   make: *** [Makefile:22: htslib/libhts.a] Error 77
2021-08-17T14:40:16,255   Traceback (most recent call last):
2021-08-17T14:40:16,256     File "<string>", line 1, in <module>
2021-08-17T14:40:16,256     File "/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py", line 61, in <module>
2021-08-17T14:40:16,257       setup(
2021-08-17T14:40:16,257     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-08-17T14:40:16,258       return distutils.core.setup(**attrs)
2021-08-17T14:40:16,258     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-08-17T14:40:16,258       dist.run_commands()
2021-08-17T14:40:16,259     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-08-17T14:40:16,260       self.run_command(cmd)
2021-08-17T14:40:16,260     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-08-17T14:40:16,261       cmd_obj.run()
2021-08-17T14:40:16,262     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-08-17T14:40:16,262       self.run_command('build')
2021-08-17T14:40:16,263     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-08-17T14:40:16,263       self.distribution.run_command(command)
2021-08-17T14:40:16,264     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-08-17T14:40:16,265       cmd_obj.run()
2021-08-17T14:40:16,265     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-08-17T14:40:16,265       self.run_command(cmd_name)
2021-08-17T14:40:16,266     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-08-17T14:40:16,266       self.distribution.run_command(command)
2021-08-17T14:40:16,267     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-08-17T14:40:16,268       cmd_obj.run()
2021-08-17T14:40:16,268     File "/usr/lib/python3/dist-packages/cffi/setuptools_ext.py", line 144, in run
2021-08-17T14:40:16,285       base_class.run(self)
2021-08-17T14:40:16,285     File "/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py", line 57, in run
2021-08-17T14:40:16,285       self.execute(compile_hts, [], 'Compiling htslib using Makefile')
2021-08-17T14:40:16,286     File "/usr/lib/python3.9/distutils/cmd.py", line 335, in execute
2021-08-17T14:40:16,286       util.execute(func, args, msg, dry_run=self.dry_run)
2021-08-17T14:40:16,286     File "/usr/lib/python3.9/distutils/util.py", line 304, in execute
2021-08-17T14:40:16,311       func(*args)
2021-08-17T14:40:16,312     File "/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py", line 55, in compile_hts
2021-08-17T14:40:16,312       subprocess.check_call(['make', os.path.join('htslib', 'libhts.a'), 'pymod.a'])
2021-08-17T14:40:16,312     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-08-17T14:40:16,313       raise CalledProcessError(retcode, cmd)
2021-08-17T14:40:16,313   subprocess.CalledProcessError: Command '['make', 'htslib/libhts.a', 'pymod.a']' returned non-zero exit status 2.
2021-08-17T14:40:16,412   Building wheel for modbampy (setup.py): finished with status 'error'
2021-08-17T14:40:16,413   ERROR: Failed building wheel for modbampy
2021-08-17T14:40:16,413   Running setup.py clean for modbampy
2021-08-17T14:40:16,414   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-hio4h_o5/modbampy_c56de2d09ac74a369ff1e908adb134d7/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-08-17T14:40:17,391   /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-08-17T14:40:17,392     warnings.warn("String literal found in cdef() or type source. "
2021-08-17T14:40:17,563   running clean
2021-08-17T14:40:17,568   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-08-17T14:40:17,570   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-08-17T14:40:17,573   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-08-17T14:40:17,574   'build/scripts-3.9' does not exist -- can't clean it
2021-08-17T14:40:17,574   removing 'build'
2021-08-17T14:40:17,651 Failed to build modbampy
2021-08-17T14:40:17,652 ERROR: Failed to build one or more wheels
2021-08-17T14:40:17,653 Exception information:
2021-08-17T14:40:17,653 Traceback (most recent call last):
2021-08-17T14:40:17,653   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-08-17T14:40:17,653     status = self.run(options, args)
2021-08-17T14:40:17,653   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-08-17T14:40:17,653     return func(self, options, args)
2021-08-17T14:40:17,653   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-08-17T14:40:17,653     raise CommandError(
2021-08-17T14:40:17,653 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-08-17T14:40:17,655 Removed build tracker: '/tmp/pip-req-tracker-3znds12u'