2021-08-23T22:16:25,106 Created temporary directory: /tmp/pip-ephem-wheel-cache-z_flnw0e
2021-08-23T22:16:25,108 Created temporary directory: /tmp/pip-req-tracker-yde6om3b
2021-08-23T22:16:25,109 Initialized build tracking at /tmp/pip-req-tracker-yde6om3b
2021-08-23T22:16:25,109 Created build tracker: /tmp/pip-req-tracker-yde6om3b
2021-08-23T22:16:25,109 Entered build tracker: /tmp/pip-req-tracker-yde6om3b
2021-08-23T22:16:25,110 Created temporary directory: /tmp/pip-wheel-s56rxori
2021-08-23T22:16:25,142 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-08-23T22:16:25,145 2 location(s) to search for versions of modbampy:
2021-08-23T22:16:25,145 * https://pypi.org/simple/modbampy/
2021-08-23T22:16:25,145 * https://www.piwheels.org/simple/modbampy/
2021-08-23T22:16:25,146 Fetching project page and analyzing links: https://pypi.org/simple/modbampy/
2021-08-23T22:16:25,146 Getting page https://pypi.org/simple/modbampy/
2021-08-23T22:16:25,147 Found index url https://pypi.org/simple
2021-08-23T22:16:25,241   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/cb/92/01d1ec72f52cd9d18713cfd5c7bb064ea70fe031fe238e265112fcd3beb2/modbampy-0.2.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=46d4c2c5add64b1c7fba490404ff463b777a1d3f57fe0c645aa5c4563f441263 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,242   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/35/0e/280e5b17b0bc460560075c77da9bd9299b6b7dcb0c061740a94f8b23c90e/modbampy-0.2.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=68b2f71492f7c491ce50d7652b203b4e1acfb5a39bee3d636caa1e812a2bc912 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,242   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/01/ef/99be5f576ff7db0f873bc7713921bffd2742fc5ccd6ab381f35a99c41854/modbampy-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=52b6a20f924a029863c27bd2b9bb77174f19ae40f77902730d00befdfdd266f0 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,242   Found link https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 (from https://pypi.org/simple/modbampy/), version: 0.2.1
2021-08-23T22:16:25,242   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c2/ce/c3ebc2ce18ca8939e9e0710df6a8fea088c82aa4ca37e9f1eba32ddb5bc2/modbampy-0.2.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=811cfd1d021a6d0f8efdf8a88648896836c21cc9d3b0b11f7101c360967892d3 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,243   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/eb/10/c44dbeeee9dccadf0568f16f4a6776fca103e9a34ebb1e9fdcdeb7cddd7d/modbampy-0.2.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2686f294fed887deedff963eaea42dbff5c9bdc218986c311fd46325bbea57f4 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,243   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/ce/d8/aa825e1ffd01346e323289eac83ed091d3927e86f4b621335c1eecef6090/modbampy-0.2.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c1bfda8e2105867ea207b701959dce3fca32f528cdc00a32bde9e48dca18be22 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,243   Found link https://files.pythonhosted.org/packages/4f/e8/ba726f9225c971fa4c82d0bb1ac45735bce2a1894f1d735e03f175f61147/modbampy-0.2.2.tar.gz#sha256=ec77ba3ee07e4e03d8b8d4341ceb15c775f0c89fa059fcacbf9f1ce58260924b (from https://pypi.org/simple/modbampy/), version: 0.2.2
2021-08-23T22:16:25,243   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c0/20/e32f4cb98c5dd7b421f1e9f9800fb3e617b333b82fff52e96d4f8761257e/modbampy-0.3.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2083b5d79443f47978846e3ecca3d0567b0c5d473b4fa4b3fe6e9802dbebcdf9 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,244   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/69/5d/abe04396191bfc1cbee3fed85295fcde0c2524778f76c6bf432bdf84644f/modbampy-0.3.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9bd2e72a022f594d5afa043cea69876ddfd7b5db2a1901e5ba2952dd2b1b9cdc (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,244   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/68/3e/26333f7e1a7d0bcd46b80085cd49f68aa614515f6786eb52e7273c17f610/modbampy-0.3.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9092bcd8b34e47177b63869610d462424d5d9bb863306c3e35da784081126fd1 (from https://pypi.org/simple/modbampy/)
2021-08-23T22:16:25,244   Found link https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed (from https://pypi.org/simple/modbampy/), version: 0.3.0
2021-08-23T22:16:25,244 Fetching project page and analyzing links: https://www.piwheels.org/simple/modbampy/
2021-08-23T22:16:25,245 Getting page https://www.piwheels.org/simple/modbampy/
2021-08-23T22:16:25,246 Found index url https://www.piwheels.org/simple
2021-08-23T22:16:25,346 Skipping link: not a file: https://www.piwheels.org/simple/modbampy/
2021-08-23T22:16:25,347 Skipping link: not a file: https://pypi.org/simple/modbampy/
2021-08-23T22:16:25,366 Given no hashes to check 1 links for project 'modbampy': discarding no candidates
2021-08-23T22:16:25,384 Collecting modbampy==0.3.0
2021-08-23T22:16:25,385   Created temporary directory: /tmp/pip-unpack-60k7dtdn
2021-08-23T22:16:25,428   Downloading modbampy-0.3.0.tar.gz (804 kB)
2021-08-23T22:16:26,167   Added modbampy==0.3.0 from https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed to build tracker '/tmp/pip-req-tracker-yde6om3b'
2021-08-23T22:16:26,168     Running setup.py (path:/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py) egg_info for package modbampy
2021-08-23T22:16:26,169     Created temporary directory: /tmp/pip-pip-egg-info-rq_92rpk
2021-08-23T22:16:26,170     Running command python setup.py egg_info
2021-08-23T22:16:27,316     /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-08-23T22:16:27,317       warnings.warn("String literal found in cdef() or type source. "
2021-08-23T22:16:27,461     running egg_info
2021-08-23T22:16:27,463     creating /tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info
2021-08-23T22:16:27,464     writing /tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/PKG-INFO
2021-08-23T22:16:27,467     writing dependency_links to /tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/dependency_links.txt
2021-08-23T22:16:27,469     writing entry points to /tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/entry_points.txt
2021-08-23T22:16:27,470     writing requirements to /tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/requires.txt
2021-08-23T22:16:27,471     writing top-level names to /tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/top_level.txt
2021-08-23T22:16:27,472     writing manifest file '/tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/SOURCES.txt'
2021-08-23T22:16:27,626     reading manifest file '/tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/SOURCES.txt'
2021-08-23T22:16:27,628     reading manifest template 'MANIFEST.in'
2021-08-23T22:16:27,631     warning: no files found matching 'LICENSE.md'
2021-08-23T22:16:27,647     no previously-included directories found matching 'htslib/test'
2021-08-23T22:16:27,648     no previously-included directories found matching 'htslib/htscodecs/tests'
2021-08-23T22:16:27,649     no previously-included directories found matching 'build'
2021-08-23T22:16:27,650     no previously-included directories found matching 'docs'
2021-08-23T22:16:27,650     adding license file 'LICENSE'
2021-08-23T22:16:27,658     writing manifest file '/tmp/pip-pip-egg-info-rq_92rpk/modbampy.egg-info/SOURCES.txt'
2021-08-23T22:16:27,743   Source in /tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5 has version 0.3.0, which satisfies requirement modbampy==0.3.0 from https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed
2021-08-23T22:16:27,744   Removed modbampy==0.3.0 from https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed from build tracker '/tmp/pip-req-tracker-yde6om3b'
2021-08-23T22:16:27,748 Created temporary directory: /tmp/pip-unpack-vvz162dd
2021-08-23T22:16:27,749 Building wheels for collected packages: modbampy
2021-08-23T22:16:27,753   Created temporary directory: /tmp/pip-wheel-zhr7d_g7
2021-08-23T22:16:27,754   Building wheel for modbampy (setup.py): started
2021-08-23T22:16:27,754   Destination directory: /tmp/pip-wheel-zhr7d_g7
2021-08-23T22:16:27,754   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zhr7d_g7
2021-08-23T22:16:28,744   /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-08-23T22:16:28,745     warnings.warn("String literal found in cdef() or type source. "
2021-08-23T22:16:28,894   running bdist_wheel
2021-08-23T22:16:28,898   running build
2021-08-23T22:16:28,899   running build_py
2021-08-23T22:16:29,039   creating build
2021-08-23T22:16:29,040   creating build/lib.linux-armv7l-3.9
2021-08-23T22:16:29,041   creating build/lib.linux-armv7l-3.9/modbampy
2021-08-23T22:16:29,042   copying modbampy/__init__.py -> build/lib.linux-armv7l-3.9/modbampy
2021-08-23T22:16:29,045   running build_ext
2021-08-23T22:16:29,046   generating cffi module 'build/temp.linux-armv7l-3.9/libmodbampy.c'
2021-08-23T22:16:29,046   creating build/temp.linux-armv7l-3.9
2021-08-23T22:16:29,070   Compiling htslib using Makefile
2021-08-23T22:16:29,098   Compiling libhts.a
2021-08-23T22:16:29,099   cd htslib/ \
2021-08-23T22:16:29,099   	&& autoheader \
2021-08-23T22:16:29,099   	&& autoconf \
2021-08-23T22:16:29,100   	&& CFLAGS="-fpic -msse3 -O3 -std=c99 " ./configure  \
2021-08-23T22:16:29,100   	&& make -j 4
2021-08-23T22:16:31,826   checking for gcc... gcc
2021-08-23T22:16:32,007   checking whether the C compiler works... no
2021-08-23T22:16:32,016   configure: error: in `/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/htslib':
2021-08-23T22:16:32,017   configure: error: C compiler cannot create executables
2021-08-23T22:16:32,017   See `config.log' for more details
2021-08-23T22:16:32,098   make: *** [Makefile:24: htslib/libhts.a] Error 77
2021-08-23T22:16:32,100   Traceback (most recent call last):
2021-08-23T22:16:32,100     File "<string>", line 1, in <module>
2021-08-23T22:16:32,100     File "/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py", line 61, in <module>
2021-08-23T22:16:32,101       setup(
2021-08-23T22:16:32,101     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-08-23T22:16:32,102       return distutils.core.setup(**attrs)
2021-08-23T22:16:32,102     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-08-23T22:16:32,102       dist.run_commands()
2021-08-23T22:16:32,103     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-08-23T22:16:32,104       self.run_command(cmd)
2021-08-23T22:16:32,104     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-08-23T22:16:32,105       cmd_obj.run()
2021-08-23T22:16:32,105     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-08-23T22:16:32,106       self.run_command('build')
2021-08-23T22:16:32,106     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-08-23T22:16:32,106       self.distribution.run_command(command)
2021-08-23T22:16:32,107     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-08-23T22:16:32,108       cmd_obj.run()
2021-08-23T22:16:32,108     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-08-23T22:16:32,108       self.run_command(cmd_name)
2021-08-23T22:16:32,109     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-08-23T22:16:32,109       self.distribution.run_command(command)
2021-08-23T22:16:32,109     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-08-23T22:16:32,110       cmd_obj.run()
2021-08-23T22:16:32,111     File "/usr/lib/python3/dist-packages/cffi/setuptools_ext.py", line 144, in run
2021-08-23T22:16:32,111       base_class.run(self)
2021-08-23T22:16:32,111     File "/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py", line 57, in run
2021-08-23T22:16:32,112       self.execute(compile_hts, [], 'Compiling htslib using Makefile')
2021-08-23T22:16:32,112     File "/usr/lib/python3.9/distutils/cmd.py", line 335, in execute
2021-08-23T22:16:32,112       util.execute(func, args, msg, dry_run=self.dry_run)
2021-08-23T22:16:32,113     File "/usr/lib/python3.9/distutils/util.py", line 304, in execute
2021-08-23T22:16:32,113       func(*args)
2021-08-23T22:16:32,113     File "/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py", line 55, in compile_hts
2021-08-23T22:16:32,114       subprocess.check_call(['make', os.path.join('htslib', 'libhts.a'), 'pymod.a'])
2021-08-23T22:16:32,114     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-08-23T22:16:32,115       raise CalledProcessError(retcode, cmd)
2021-08-23T22:16:32,115   subprocess.CalledProcessError: Command '['make', 'htslib/libhts.a', 'pymod.a']' returned non-zero exit status 2.
2021-08-23T22:16:32,207   Building wheel for modbampy (setup.py): finished with status 'error'
2021-08-23T22:16:32,208   ERROR: Failed building wheel for modbampy
2021-08-23T22:16:32,208   Running setup.py clean for modbampy
2021-08-23T22:16:32,209   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-s56rxori/modbampy_3b0ada1e8912457b9bf30ce8d51861b5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-08-23T22:16:33,207   /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-08-23T22:16:33,207     warnings.warn("String literal found in cdef() or type source. "
2021-08-23T22:16:33,331   running clean
2021-08-23T22:16:33,334   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-08-23T22:16:33,335   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-08-23T22:16:33,337   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-08-23T22:16:33,337   'build/scripts-3.9' does not exist -- can't clean it
2021-08-23T22:16:33,337   removing 'build'
2021-08-23T22:16:33,412 Failed to build modbampy
2021-08-23T22:16:33,413 ERROR: Failed to build one or more wheels
2021-08-23T22:16:33,413 Exception information:
2021-08-23T22:16:33,413 Traceback (most recent call last):
2021-08-23T22:16:33,413   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-08-23T22:16:33,413     status = self.run(options, args)
2021-08-23T22:16:33,413   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-08-23T22:16:33,413     return func(self, options, args)
2021-08-23T22:16:33,413   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-08-23T22:16:33,413     raise CommandError(
2021-08-23T22:16:33,413 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-08-23T22:16:33,416 Removed build tracker: '/tmp/pip-req-tracker-yde6om3b'