2021-08-26T15:25:00,495 Created temporary directory: /tmp/pip-ephem-wheel-cache-iq53wj55 2021-08-26T15:25:00,501 Created temporary directory: /tmp/pip-req-tracker-x8_h9pti 2021-08-26T15:25:00,502 Initialized build tracking at /tmp/pip-req-tracker-x8_h9pti 2021-08-26T15:25:00,503 Created build tracker: /tmp/pip-req-tracker-x8_h9pti 2021-08-26T15:25:00,503 Entered build tracker: /tmp/pip-req-tracker-x8_h9pti 2021-08-26T15:25:00,504 Created temporary directory: /tmp/pip-wheel-5dnvuple 2021-08-26T15:25:00,569 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-08-26T15:25:00,573 2 location(s) to search for versions of sequana: 2021-08-26T15:25:00,573 * https://pypi.org/simple/sequana/ 2021-08-26T15:25:00,573 * https://www.piwheels.org/simple/sequana/ 2021-08-26T15:25:00,573 Fetching project page and analyzing links: https://pypi.org/simple/sequana/ 2021-08-26T15:25:00,576 Getting page https://pypi.org/simple/sequana/ 2021-08-26T15:25:00,580 Found index url https://pypi.org/simple 2021-08-26T15:25:01,149 Found link https://files.pythonhosted.org/packages/36/8c/248dad81c4c7774c280a03c432fb07aa977a5488ab25e4cf665e34de16db/sequana-0.0.2.tar.gz#sha256=5a68ea464596221cc2136bd406532e551e024858401306ce220d74f33dc67a25 (from https://pypi.org/simple/sequana/), version: 0.0.2 2021-08-26T15:25:01,151 Found link https://files.pythonhosted.org/packages/6f/ca/b84533ab717860e881fdd43a34af23bab7708a6f25dea4769e93be2a4916/sequana-0.0.3.tar.gz#sha256=a35665981a7dc3bc0f4c616771deff660f200b68ddcf7111ddbf50954783ada6 (from https://pypi.org/simple/sequana/), version: 0.0.3 2021-08-26T15:25:01,152 Found link https://files.pythonhosted.org/packages/33/c0/444bc6350ab385d8839e22708e71d4de51b7928d64b8794f5c94825b4314/sequana-0.1.0.tar.gz#sha256=003f89e7a3661f85300aa7469bd103e513f183b2d31c38658ee20d413a26b6e6 (from https://pypi.org/simple/sequana/), version: 0.1.0 2021-08-26T15:25:01,153 Found link https://files.pythonhosted.org/packages/f8/3c/91b80c7b45e5eb1a3ea75e9d802592a9849433e6c2f6c72048cfb3ed8b88/sequana-0.1.1.tar.gz#sha256=14170dd319f68d60f106596506e5ddb77e52fe14ce7a5a41ae06172149f6effd (from https://pypi.org/simple/sequana/), version: 0.1.1 2021-08-26T15:25:01,153 Found link https://files.pythonhosted.org/packages/b2/eb/7cc9779f1bc2326e773b4aadcdbb887ee159d5577a264391849c4bf30675/sequana-0.1.2.tar.gz#sha256=67a3165a43783d919587a50086c9809b142332e7ffe32c32956dfccf3f6ce759 (from https://pypi.org/simple/sequana/), version: 0.1.2 2021-08-26T15:25:01,154 Found link https://files.pythonhosted.org/packages/a3/f2/ddd73eb6c5c5fdeb14929d10eb9da3ce0ba199de287e37e18ba9fda2fff0/sequana-0.1.4.tar.gz#sha256=53e6f4deb016c55202264adefc65d503c9a512389f67bd4c656ace5c00fca1d3 (from https://pypi.org/simple/sequana/), version: 0.1.4 2021-08-26T15:25:01,155 Found link https://files.pythonhosted.org/packages/c9/d3/5d43f18eba7cf6d8ffe14b211e78055cb11dc4ab2029ae6a8bf038016dc5/sequana-0.1.5.tar.gz#sha256=5a9b672fcce8ced9fbc3fc0bc86d9f7463860929f329391466a0a1330cf3618f (from https://pypi.org/simple/sequana/), version: 0.1.5 2021-08-26T15:25:01,156 Found link https://files.pythonhosted.org/packages/06/76/278f62063ff252e99e14d32fe8d312f8c4b6009e17057ba2412914b01e33/sequana-0.1.6.tar.gz#sha256=014e162eb8b0a5fc27ab63191849f0407d73c0a7b8b7e559b2b70b7e39cc4113 (from https://pypi.org/simple/sequana/), version: 0.1.6 2021-08-26T15:25:01,157 Found link https://files.pythonhosted.org/packages/e2/68/6d81996d2150c703936789e5f763758f1abd852cb70a305d27a72f4ad07e/sequana-0.1.7.tar.gz#sha256=a6b544d73f5c444e9153e5d1fbe372d96f2fbd7ba12f068fc0b5d42d5afdfded (from https://pypi.org/simple/sequana/), version: 0.1.7 2021-08-26T15:25:01,158 Found link https://files.pythonhosted.org/packages/7d/07/16a171ad4d3b7b16f84b0daf209fe08c69049d3b2a999b9f033efc489b50/sequana-0.1.8.tar.gz#sha256=0eaa62a22bc0e4dfd0d4dc1ef1541bf46dbeac91eec7c9a37d53dd3dfa65aad3 (from https://pypi.org/simple/sequana/), version: 0.1.8 2021-08-26T15:25:01,159 Found link https://files.pythonhosted.org/packages/35/e4/866a0e92729208de63257f5cf28fcb8a55f17f7782625c0b76c25bc6e36d/sequana-0.1.9.tar.gz#sha256=e3ff0a4a524f5347d8ec56ea5c0c38b471e50fa99025e2f13975b095ae7c9a9c (from https://pypi.org/simple/sequana/), version: 0.1.9 2021-08-26T15:25:01,160 Found link https://files.pythonhosted.org/packages/41/e3/fb07d2f2af1ecb9723985d41e4bb5381b2ce629def70de356d01b4073bc2/sequana-0.1.10.tar.gz#sha256=747aea49cb0ed23408ec1d0546599d60deeb7d4ce2c488606b54e5484a0ff16e (from https://pypi.org/simple/sequana/), version: 0.1.10 2021-08-26T15:25:01,160 Found link https://files.pythonhosted.org/packages/3e/f9/018c06c7a186369e322ffba87f7464ee15512382c0667742b7f2f1916e56/sequana-0.1.11.tar.gz#sha256=e43a4d61b2aaa281aa04cbd1fa5e047a8fde9058654462f923fc95339c2791d1 (from https://pypi.org/simple/sequana/), version: 0.1.11 2021-08-26T15:25:01,161 Found link https://files.pythonhosted.org/packages/57/f5/2c96c8ea3fdc5c514a119a9d07c5e200af33912ee359899b46f9f8ec16a9/sequana-0.1.12.tar.gz#sha256=8039374e99b48a2d6713a885b12d2b468f7b34b1bee97dba73b47f5170137d9a (from https://pypi.org/simple/sequana/), version: 0.1.12 2021-08-26T15:25:01,162 Found link https://files.pythonhosted.org/packages/d0/45/b4ca98abb0fd8ce106d881ef50ab5780c367f90c3dfd76520f96ce03f6d4/sequana-0.1.13.tar.gz#sha256=243f97f14e55e1a63066387a40210f6fae69ace1867d37c944b5c2adca02aa56 (from https://pypi.org/simple/sequana/), version: 0.1.13 2021-08-26T15:25:01,163 Found link https://files.pythonhosted.org/packages/61/13/efcace55134bc652bc1ab30182602551f401973f8aa9f62b311cee14478e/sequana-0.1.14.tar.gz#sha256=56de9f1ad75975640048dd487880d5806b4c4171be519afb114af7e1a1c2524c (from https://pypi.org/simple/sequana/), version: 0.1.14 2021-08-26T15:25:01,164 Found link https://files.pythonhosted.org/packages/11/62/b23f08433efdfa15bfbb3e4b43bd3c1f2470358c0acc6ccf8ba0e2930651/sequana-0.1.15.tar.gz#sha256=367f01afbf53b9daa5fb3c2d1f0b572f47c1eb5e2499263c1d7d037e30d86a69 (from https://pypi.org/simple/sequana/), version: 0.1.15 2021-08-26T15:25:01,165 Found link https://files.pythonhosted.org/packages/36/00/175581613c7e7fe2ff3b4649743d4954e5083ffdeccdb09a3610aeb9a83b/sequana-0.1.16.tar.gz#sha256=c129726c5ba906898d2b64ae0e6c55e922cad57f9899527fb764aa4641d3d124 (from https://pypi.org/simple/sequana/), version: 0.1.16 2021-08-26T15:25:01,166 Found link https://files.pythonhosted.org/packages/49/ad/dbf2095ca4731260fd4e196f3082839e9d66496eafbaf52aedebbb7764df/sequana-0.1.17.1.tar.gz#sha256=c986cfd188b2b9926fa47a441b463b4992b721a1814fdf816f19fae28bfda3d8 (from https://pypi.org/simple/sequana/), version: 0.1.17.1 2021-08-26T15:25:01,167 Found link https://files.pythonhosted.org/packages/a9/a1/ab99030bd678d3ac5df6304919fe0d5f31d6c725e217d212148017c44b21/sequana-0.1.18.tar.gz#sha256=a46bca6bd4d4a615854901b845161866be8de61c63bb8fd8aa87332bd999e2e6 (from https://pypi.org/simple/sequana/), version: 0.1.18 2021-08-26T15:25:01,168 Found link https://files.pythonhosted.org/packages/ea/f3/97de8d22730a166e2f6c67ad89dac248e5ff904d2cb5dbe95921425a6ca9/sequana-0.1.19.tar.gz#sha256=675770bba7d1a1164c11c1f2a9a8dc72c93130c7485a051dbcf00dc702f77936 (from https://pypi.org/simple/sequana/), version: 0.1.19 2021-08-26T15:25:01,169 Found link https://files.pythonhosted.org/packages/38/50/59e74f88c91147f9f4f21fc6242e1a8d2c04f6d32d9eb6b608f1e3b3c2b8/sequana-0.1.20.tar.gz#sha256=36ee03b785cf4fb00ceeb078aceb385f40322a81021ac46b0c16ce0d8dc1d51f (from https://pypi.org/simple/sequana/), version: 0.1.20 2021-08-26T15:25:01,170 Found link https://files.pythonhosted.org/packages/a9/cf/773cd3e5ff3a822e5910a3ae88347c75a02ed41d749be7166d4cc5cd4e4b/sequana-0.1.21.tar.gz#sha256=6ffb487609d0db8acb213e53407c3c1045158db0d9d253985ddae334183aea0f (from https://pypi.org/simple/sequana/), version: 0.1.21 2021-08-26T15:25:01,170 Found link https://files.pythonhosted.org/packages/90/4d/0d334b9e687adfa8bf2f98ecc3f4e5173d72276d296269087b2390fc9aef/sequana-0.2.0.tar.gz#sha256=848e146c90a9f1d01f918a5f3d55eee8adc69510eee25276a18bd11dd4d9ed82 (from https://pypi.org/simple/sequana/), version: 0.2.0 2021-08-26T15:25:01,171 Found link https://files.pythonhosted.org/packages/56/71/56958a396df98be965163812a97f369c568b4672344496447e66b201134a/sequana-0.2.1.tar.gz#sha256=75a552ec790be9cdaf519d3a5fa695312dccf83f4125770e285e5ecf2e56124c (from https://pypi.org/simple/sequana/), version: 0.2.1 2021-08-26T15:25:01,172 Found link https://files.pythonhosted.org/packages/67/00/e2bbfe5ecfb468b98ae7073ddb1b5928e74f012275f4c211319cd0474c53/sequana-0.3.0.tar.gz#sha256=ddb28bcfe2d6f7269c177327e57468c44a61bd68a88184d27540ea8a5110049b (from https://pypi.org/simple/sequana/), version: 0.3.0 2021-08-26T15:25:01,173 Found link https://files.pythonhosted.org/packages/3f/32/35cc61a7f63d6a51d9425e5bbb2628bc1aec9248a73cf477ec3e6c9db2d4/sequana-0.4.0.tar.gz#sha256=a753ec894449535bb537e1654ba80584b1c9bd0aaecc9eefea3a43c211755e4f (from https://pypi.org/simple/sequana/), version: 0.4.0 2021-08-26T15:25:01,174 Found link https://files.pythonhosted.org/packages/f5/b3/66d55de5b105eb01d6cab89f5964b96c2e5b5ae70026e9e86e3616187c70/sequana-0.4.1.tar.gz#sha256=4e722da0054e8c5bdc71f63f8214f9c58857fe0233b4fbe561708df31f078671 (from https://pypi.org/simple/sequana/), version: 0.4.1 2021-08-26T15:25:01,175 Found link https://files.pythonhosted.org/packages/3d/43/9d14649acc8e7d79de1cb88ac3844704563f852f5f80f540762dc6740e8c/sequana-0.4.2.tar.gz#sha256=3b5da1b07bb39574c719b9286973ae0668f3a58bb53841df91d6e5c6106e6209 (from https://pypi.org/simple/sequana/), version: 0.4.2 2021-08-26T15:25:01,176 Found link https://files.pythonhosted.org/packages/e0/89/812385ad0c00c0ea9d9931aeea5be88c99a9d82bf9e8313cea9d3dbab343/sequana-0.5.0.tar.gz#sha256=d4c6291836d5464535422e708c872f527c282b57a579c0c07e75ebeda12514b2 (from https://pypi.org/simple/sequana/), version: 0.5.0 2021-08-26T15:25:01,177 Found link https://files.pythonhosted.org/packages/71/35/a2e9226296bed94cabbcea960f0acab8027a4f01fc0874d700e2dde5641f/sequana-0.5.1.tar.gz#sha256=550aa7eaf17f19ebf5adcd96b7e1d1abf6b35b0a92bf91de5526e5dca591fb5a (from https://pypi.org/simple/sequana/), version: 0.5.1 2021-08-26T15:25:01,177 Found link https://files.pythonhosted.org/packages/8e/fc/78c990cee1896fc1b84603460008adea30361089c11022e3642d7bd04cdd/sequana-0.5.2.tar.gz#sha256=fecdd89470ddcef1330f48a6a07af09340cdc73e23935a95921265fe1927b467 (from https://pypi.org/simple/sequana/), version: 0.5.2 2021-08-26T15:25:01,178 Found link https://files.pythonhosted.org/packages/3a/f9/36ae041dd3b7603937bfc6395814d18fac2a56882b9c554d1fa82fb7c2bc/sequana-0.6.0.tar.gz#sha256=6a1ce240bd11285e6033282e648509efdb6d6ed113242e8749275617a6d13f8a (from https://pypi.org/simple/sequana/), version: 0.6.0 2021-08-26T15:25:01,179 Found link https://files.pythonhosted.org/packages/50/fe/782989640fe0f99a224d69dfe48f5c8466b95f649b345e2e8faf3481e93f/sequana-0.6.1.tar.gz#sha256=5d55fbe016b5c11e4eb505d25706f579d50b0460dfb518d9770a3918e2cd1ba9 (from https://pypi.org/simple/sequana/), version: 0.6.1 2021-08-26T15:25:01,180 Found link https://files.pythonhosted.org/packages/d5/71/f1e84cc20f16f510ae4ea4e91f2b7a253b2ea5a41b65d2806a1f51914caa/sequana-0.6.2.tar.gz#sha256=d10d26f7dec1a0b58f7d383c07d110ff78e1d1b9848d12b6a8313b93730e4577 (from https://pypi.org/simple/sequana/), version: 0.6.2 2021-08-26T15:25:01,181 Found link https://files.pythonhosted.org/packages/50/92/9e171dd9b6d5f18a257ee25b2f293b2ca5a246cc61290bcc36ab28e13c4b/sequana-0.6.3.tar.gz#sha256=5fbdba3e7f5d45fb3ba60ddf74ac7f23959f981c5685a9915db27943ef2ef789 (from https://pypi.org/simple/sequana/), version: 0.6.3 2021-08-26T15:25:01,182 Found link https://files.pythonhosted.org/packages/e1/c8/6604f2cae69b3a1f385ef23c793d658216ef7dbf3327fc83c740d62d4d57/sequana-0.6.3.post1.tar.gz#sha256=cdde5470cb569d918526c7ad35b2972ac6fd231f1004200d44d7e15c93070be7 (from https://pypi.org/simple/sequana/), version: 0.6.3.post1 2021-08-26T15:25:01,183 Found link https://files.pythonhosted.org/packages/0b/4b/d9ffbc2b826fc1c9bd8059fb44e4965ad05668650dd9ff495e21a57b1fd0/sequana-0.6.4.tar.gz#sha256=3bba760223d4116e3b4376dc0017e305d5ce8ee2192a5ee069391e8feabf284c (from https://pypi.org/simple/sequana/), version: 0.6.4 2021-08-26T15:25:01,184 Found link https://files.pythonhosted.org/packages/c3/1d/8c938ea8d9ce30775f9e54d2c52be5febfdea65acb1f4ea4e1d0d0a76e22/sequana-0.6.5.post1.tar.gz#sha256=7eee9e748a4668a115eff49b989ee4c1fe5a52ad73eed00e24013d4a7b623407 (from https://pypi.org/simple/sequana/), version: 0.6.5.post1 2021-08-26T15:25:01,185 Found link https://files.pythonhosted.org/packages/da/5e/2859c6bfd78c5abb2bbb72a432e052678829511a166524da97c37d776c9a/sequana-0.6.5.post2.tar.gz#sha256=79ae56447befbad5ac383d957d88c8163a5955b44c47c607cd1c8e80b34cb549 (from https://pypi.org/simple/sequana/), version: 0.6.5.post2 2021-08-26T15:25:01,186 Found link https://files.pythonhosted.org/packages/74/dd/db06102f885ecc1ac569b3d0bf40798402cfe2d0ed0162c363580aff9979/sequana-0.6.5.post3.tar.gz#sha256=1aeab4823a6e62fdd526889e00e1d548a70e2b7bee4bf6a1ed76d6d8917fb1a2 (from https://pypi.org/simple/sequana/), version: 0.6.5.post3 2021-08-26T15:25:01,187 Found link https://files.pythonhosted.org/packages/b8/5a/0e69348ba763eeed3686ee64c13b31b3b418c3d365488dc225ad7063bd87/sequana-0.7.0.tar.gz#sha256=48be98668a53eca7fed648badafee73df13bcc7850c9202dcebfc0e327e6e813 (from https://pypi.org/simple/sequana/), version: 0.7.0 2021-08-26T15:25:01,188 Found link https://files.pythonhosted.org/packages/3e/6f/642ff17496d724c79e63165f22215043153fdeca7272e7c2bb2d0f7d00b7/sequana-0.7.1.tar.gz#sha256=891e9a27fd992a9713de2e3afac9b4c8042d492703be65e1ae2b0ab098e275d6 (from https://pypi.org/simple/sequana/), version: 0.7.1 2021-08-26T15:25:01,189 Found link https://files.pythonhosted.org/packages/5a/0b/12b137f2edaaabd10323ac0a66af7b8aa2cf2af2c8a5b18e2d1467644eb2/sequana-0.8.0.tar.gz#sha256=c538faf3e9dcfe5546301f172aa0145133c241b638aa0e43ca816c1743df8f20 (from https://pypi.org/simple/sequana/), version: 0.8.0 2021-08-26T15:25:01,190 Found link https://files.pythonhosted.org/packages/7c/c2/14a70eddbfcf45948d4bd36b1ace50f002e1e09fdc31b91d805bff8cdded/sequana-0.8.1.tar.gz#sha256=bd00660d1cb8886dd79b9460742fb62d29f39a4174094bc0399694834b2612cc (from https://pypi.org/simple/sequana/), version: 0.8.1 2021-08-26T15:25:01,191 Found link https://files.pythonhosted.org/packages/00/3b/846d0b8478bfbb60343377e5d0c2209add600da5c5d66e6348d465c1a8c4/sequana-0.8.2.tar.gz#sha256=11c51f29d0d696451896fc56e940e059d191b6f17616776e08eb5b1c5ac5dda5 (from https://pypi.org/simple/sequana/), version: 0.8.2 2021-08-26T15:25:01,191 Found link https://files.pythonhosted.org/packages/bf/03/10d3d118833a6577ae01c789395358cc828e9a0c6ebeeeac0150cc243513/sequana-0.8.3.tar.gz#sha256=4c47176589613a57227e742b9f31144f6714dad53078708baa4a3d1ea3a16994 (from https://pypi.org/simple/sequana/), version: 0.8.3 2021-08-26T15:25:01,192 Found link https://files.pythonhosted.org/packages/8d/c7/f64832ee59d86715a6abcb2e057d22c9519b4528500adaa2d0de8b8e4699/sequana-0.8.4.tar.gz#sha256=a11baec596d779f399512d3fe853ecdd582a16691880c495509d34d8cc66e2e7 (from https://pypi.org/simple/sequana/), version: 0.8.4 2021-08-26T15:25:01,193 Found link https://files.pythonhosted.org/packages/16/df/d22d28b026a78415f80e1afbc4d51fb6d7d32ace24bc792a7da93b8c62ef/sequana-0.8.5.tar.gz#sha256=a1c0b4f766b774380d74c90cc4af7b6c222a2d1630c0be4a906fff8d796ffe08 (from https://pypi.org/simple/sequana/), version: 0.8.5 2021-08-26T15:25:01,194 Found link https://files.pythonhosted.org/packages/a3/57/de2edd477c0ddf4c67ef68a475996bb071bf0ead4a6791849cea0c92ff25/sequana-0.8.6.tar.gz#sha256=fa651ddd8a29046d6e5aec081ad30b8b0469b8e81fb2a59cf4d8bb20c4fe5a2f (from https://pypi.org/simple/sequana/), version: 0.8.6 2021-08-26T15:25:01,195 Found link https://files.pythonhosted.org/packages/dc/f1/388c45faac62457e6aede3478ba7b83291df8667c01159a9d62c3690f9ed/sequana-0.9.0.tar.gz#sha256=2f649b914ea2fe9277e7c5257d908997cc0f7a980e569c89f2a3a2b8ebdd83f4 (from https://pypi.org/simple/sequana/), version: 0.9.0 2021-08-26T15:25:01,196 Found link https://files.pythonhosted.org/packages/d1/60/4436fb43f4658c092b6b07b7b58546fbaf9c6f1bb8361baef075cda4535b/sequana-0.9.1.tar.gz#sha256=22c054c04e8584c61e1b9838c96aa2bd0aee08b42c4852614ed046e076b4723a (from https://pypi.org/simple/sequana/), version: 0.9.1 2021-08-26T15:25:01,197 Found link https://files.pythonhosted.org/packages/fe/dd/8b02961ce903e04c2ff8473d2d10c7ccd524bf8b5db8e01215ea51131ffc/sequana-0.9.2.tar.gz#sha256=915e3d3041885d36011d38b94f06dd9cd8385896b6b4aabdc58c3556069a9226 (from https://pypi.org/simple/sequana/), version: 0.9.2 2021-08-26T15:25:01,198 Found link https://files.pythonhosted.org/packages/fe/62/342b160ea5c49f017c547e041c57af1e04567ec19caf38700096ae5ca778/sequana-0.9.3.tar.gz#sha256=00ebb6a68e2a7379ec377565112228351a611d60971d121f18471634eb17266c (from https://pypi.org/simple/sequana/), version: 0.9.3 2021-08-26T15:25:01,198 Found link https://files.pythonhosted.org/packages/de/c1/925f217661dd86c1e51490fd8f4c061033b7152ff1d5d26dd3178437724e/sequana-0.9.4.tar.gz#sha256=047f1a2664a6882999dfe275b42dc806fa762370c50b61fd8d226eae535a44c2 (from https://pypi.org/simple/sequana/), version: 0.9.4 2021-08-26T15:25:01,199 Found link https://files.pythonhosted.org/packages/3d/30/46988e24c359479d4808b277c5c9230371b5f0f7d022ced48404ca795e82/sequana-0.9.5.tar.gz#sha256=520b319a2b7ad5eca77d7c6d3acef135fb0015560efaf8bd6fa40f2caccbbfff (from https://pypi.org/simple/sequana/), version: 0.9.5 2021-08-26T15:25:01,200 Found link https://files.pythonhosted.org/packages/2f/fc/f32fabca2937e7213b16a9feab8b536a76a67278ee5643ba78d628830457/sequana-0.9.6.tar.gz#sha256=879071711f7e9c0537b7f16614caa92e46c3683db1965070068876b0d1fb389c (from https://pypi.org/simple/sequana/), version: 0.9.6 2021-08-26T15:25:01,201 Found link https://files.pythonhosted.org/packages/ff/75/e1ef2e3648a089e98fe75ca07d35e6ef884b3b591a0600ebfe29e7bff534/sequana-0.9.7.tar.gz#sha256=efe71e3d1b694f6ce86c63cadd90a65bb48f923110e43e79a32bb34a04288017 (from https://pypi.org/simple/sequana/), version: 0.9.7 2021-08-26T15:25:01,202 Found link https://files.pythonhosted.org/packages/02/b0/78c5e898532879ec045c7a10f8482966ae854d9ced08d75fd21679457c59/sequana-0.9.8.tar.gz#sha256=b9117d270539742cfbbd31084e20b38f856a49621a42fdc515e833b16a43787c (from https://pypi.org/simple/sequana/), version: 0.9.8 2021-08-26T15:25:01,203 Found link https://files.pythonhosted.org/packages/9c/f6/5b6a3b0b8ab58aaf058070ad05ddc2b56a47a070278c8d0751f873cd410e/sequana-0.10.0.tar.gz#sha256=611d22d8288086877f7795e1093775ac04eebfd5eb02d51aba07cfb8ee6be2b6 (from https://pypi.org/simple/sequana/), version: 0.10.0 2021-08-26T15:25:01,204 Found link https://files.pythonhosted.org/packages/c9/1b/f84aa4bd2433debe7755a13578e557548b2f82eaffd75eebfd021612d8e0/sequana-0.11.0.tar.gz#sha256=70326f92d0095d016f36d3699ccfd1572eee35f325a3586f755df0553a3dc4f0 (from https://pypi.org/simple/sequana/), version: 0.11.0 2021-08-26T15:25:01,205 Found link https://files.pythonhosted.org/packages/e3/80/c03812cefb6d07bcb93777f3993270291c63424dd3aa86245f440d7a7915/sequana-0.11.1.tar.gz#sha256=f281872d6df4c3cbd0f2b6ecec337e1d37737fa6a519d1bce94672fb6b510d98 (from https://pypi.org/simple/sequana/), version: 0.11.1 2021-08-26T15:25:01,206 Found link https://files.pythonhosted.org/packages/72/ba/dc49aa94469c1e6eec3327fde67e3e3f271ea052302d1613235b85f09896/sequana-0.12.0.tar.gz#sha256=31e446be35f5b95aa8e58f7a5621f5fda1ad4e6e674151c7a7032b0b26fa06b9 (from https://pypi.org/simple/sequana/), version: 0.12.0 2021-08-26T15:25:01,207 Fetching project page and analyzing links: https://www.piwheels.org/simple/sequana/ 2021-08-26T15:25:01,207 Getting page https://www.piwheels.org/simple/sequana/ 2021-08-26T15:25:01,210 Found index url https://www.piwheels.org/simple 2021-08-26T15:25:01,456 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.0.2-py3-none-any.whl#sha256=8565432ebe4263c2fd81f958a88814fd932deef7d8e488854db16600a39fc4b9 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,457 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.0.3-py3-none-any.whl#sha256=2c7fbcfed3e6a09a9088f8373053f9256dda94deca725dd0f129f8a51130323c (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,458 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.0-py3-none-any.whl#sha256=979f04997f10759229e1cc7030a78f086ca36d54a9a68d48743734700cc907f6 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,458 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.10.0-py3-none-any.whl#sha256=76bb00734b26314836e4c283c3406e597c96626ba9b367ba50e4f0aadf66c2d6 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,459 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.1-py3-none-any.whl#sha256=4e7dd7cad3fca35158004af8ee06e0ec911f098fb7fbace75e7ae3c35e91a917 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,459 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.10-py3-none-any.whl#sha256=407656fa50b3fc2277e6d63fcd545fc4e9c13092a89a2a5cc782f84d008725b5 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,460 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.11.0-py3-none-any.whl#sha256=28b735de349e182ab4abffd76dcfa2bc31884516740f4825325e02fd774d41ed (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,461 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.11-py3-none-any.whl#sha256=0514b5d913fc13bc5bd0581143c312ce0e8962bd493655d11666cd1ffc4cae27 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,461 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.11.1-py3-none-any.whl#sha256=eccb28d0803214ecf00e4dce7cb445b48ea1f2b2d49cf8019d44168ed79f6c3d (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,462 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.12-py3-none-any.whl#sha256=3f04e8007283308a1ca403222a81dfa0b39e862fc4b273b877ac7c0515aa1bed (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,463 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.13-py3-none-any.whl#sha256=d79163ff3005e50c03bd3d241bd28c77fc27b149ca3cafcaac73dd11f3da756a (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,463 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.14-py3-none-any.whl#sha256=ced50d95b3a00f2f8103c06a1cb6bb4097d8d4a08c461bf26525f6afe8ff75e0 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,464 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.15-py3-none-any.whl#sha256=d285757bc8a46c7b331b3a27a79a559517e57b337e0d1381e8049e125f91b558 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,465 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.16-py3-none-any.whl#sha256=8f1f80eb30386474322cbc9cb6d8ccb98397b4ebefa290886f2631f3b3540d56 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,465 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.17.1-py3-none-any.whl#sha256=42ab5898af408588dff9d91d1e90f24ce831d1fc6c6298c2ab58efd248995a84 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,466 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.18-py3-none-any.whl#sha256=325c4e727752bdcd6411fc583c6c67f5c153ccefe6a6fa61a5bb136c4cacb24f (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,467 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.19-py3-none-any.whl#sha256=072add6f657fd5ba0c484c282d0eae596f1b81bbbe5d73d01ee428afd896b26e (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,467 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.2-py3-none-any.whl#sha256=489f87ea4af5d8111aaf0b2603e4dbc8d44a47ad6a14eb44b2157490ccc4513c (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,468 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.20-py3-none-any.whl#sha256=443bc96ad7fb6fd2e4f68246cd5e0d14513ec95d0b41dcad255eff04d5ec5448 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,468 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.21-py3-none-any.whl#sha256=39c81be55199636ec0613bef138ee06c6484b7fe1fe77cfecd372a3c757a1060 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,469 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.4-py3-none-any.whl#sha256=8f3002523e9b7584a718eb2f1282a811eee489863f47e56aff0094be65fd04d0 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,470 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.5-py3-none-any.whl#sha256=6fba4d02c27c802f9371c940699ef0ece1e24bffb7553bcb9720cc07ca2a66aa (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,470 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.6-py3-none-any.whl#sha256=610326506e644e9df180931d8a20a48852a8196ba9c4d0e9aa6d1acb88d4e615 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,471 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.7-py3-none-any.whl#sha256=ccad69fd14b518346bb120b0790f15e4e949a563a0b1e560b9410a9d10d00f42 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,472 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.8-py3-none-any.whl#sha256=25d68d94847d23aecd8d532f01ab95b7a8318fb5dc9ad5bbc87731b0968dc4ea (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,472 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.1.9-py3-none-any.whl#sha256=d388a5c84fd9f1adb5094860b47e54b8ec1fc5dd60da99b5b7a4bd92471e1e5b (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,473 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.2.0-py3-none-any.whl#sha256=3f93bab506968797bfa09bd546a7890f00035664062d87d06c5cc0cae18ae47d (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,473 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.2.1-py3-none-any.whl#sha256=6c243101661c5b7e001970929b3f0854775ff25ec464016bac56bed727d1af42 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,474 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.3.0-py3-none-any.whl#sha256=784c45559b3813a77c854c88c7f87f069fc80854dab49c4ce554d9e8d955bfee (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,475 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.4.0-py3-none-any.whl#sha256=3080e21d1193e999b07f07f7227c3e70af6a9655e9c706bbfb1d6be64be0e71f (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,475 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.4.1-py3-none-any.whl#sha256=4b67e3ac6f5e54aa37b0da900d08a73ec9f5517735d2ae91fb038acab735a773 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,476 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.4.2-py3-none-any.whl#sha256=7972b2552d679935fa79ea6fb51b0465efc24cb36547875633f9ac334aebcb8d (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,477 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.5.0-py3-none-any.whl#sha256=410e59d0dddfb9c8977a537b6aaeb53c664ffe5934aec53b30dda9c317a48b38 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,477 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.5.1-py3-none-any.whl#sha256=868bfc39d3e815d57f418a29825f2e1e710f965468c8c2c42145330fac734eb1 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,478 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.5.2-py3-none-any.whl#sha256=d59cdd129c9f07de2f22deb8d6a87fdbf355ba1884f7d7bdb6c90f6e849f1041 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,478 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.0-py3-none-any.whl#sha256=591516e3de4dc8a8409e657781f9d138df70dba70689d6391cbbbc9c42b0c38e (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,479 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.1-py3-none-any.whl#sha256=d9f7ee133817ee93576077f9a05fc6b0ff338b37c5951b7640811ee905aecec9 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,480 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.2-py3-none-any.whl#sha256=9daac3efca51d0416a4eb439ec2841fe9e0f79ab1771903e47570b683d3af55c (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,480 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.3-py3-none-any.whl#sha256=d2663bf47cd7f401ceacc471e1929e187db6b88f8a9b7c9c51ea1d0483d2bb73 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,481 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.3.post1-py3-none-any.whl#sha256=cd9278fe9ca6af6d3e096fc33b888ebccafb88c29ec2b958d2cfafaaf02ef13d (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,482 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.4-py3-none-any.whl#sha256=beb134933ee6020cec0c9632f7dc90bd320833a1a0be19cc1be8f2c1702dc6d3 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,482 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.5.post1-py3-none-any.whl#sha256=c302b0d7a505ee314cb76562309a1bbc9990befe710507a6ce902b888d1b9f55 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,483 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.5.post2-py3-none-any.whl#sha256=b8efd5c1500578ea35c2ad4b23bc95e43ad9eb6c6a7584ceca08256be9c24b4c (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,483 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.6.5.post3-py3-none-any.whl#sha256=d52dea7fc456b2cb55600597e477b6d2d63e0c035f5aeb4c1abb7ebde596c3b1 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,484 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.7.0-py3-none-any.whl#sha256=c2169c7a41eee212666306fe6c7222c65cc5aabccda895d7f146d5d7f32c8731 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,485 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.7.1-py3-none-any.whl#sha256=833843fa58f0071d5fb7e389f223dfbaedb59bab50fe03e393c48d8f7e58e753 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,485 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.0-py3-none-any.whl#sha256=44036b7a0763499664f68477020c01b514be40321f58342fb288d51250ee1fbb (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,486 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.1-py3-none-any.whl#sha256=e1358a148898dc8c18d09bc91f3372287dc2b96b893c2b9602175d0831bd5a20 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,487 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.2-py3-none-any.whl#sha256=1dc0e02d6f85958f053ed73e767d0bd9f5671e22ebed95a3b70d9c5c1a5c97c8 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,487 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.3-py3-none-any.whl#sha256=55009f1bf3de983c31c6895316e81e30b6b460bba774165e9552839db7128f00 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,488 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.4-py3-none-any.whl#sha256=cdc6737edc9032885602632826e4913a082f1c66dabd70ebdfeb5695c5318c58 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,489 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.5-py3-none-any.whl#sha256=a6bf97c0284d77636b51fcd78ed7e22e0a195820fb6552be1a2540daaa433d75 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,489 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.8.6-py3-none-any.whl#sha256=0c91883675a8c454bd0725ae216bc2378d41ec952cef8ad6979ddc3b3b26e820 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,490 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.0-py3-none-any.whl#sha256=dce821b312c886051cfa4bf729f17a5df801fa195ac861642bdf07e6c653f9de (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,490 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.1-py3-none-any.whl#sha256=f2c12f5f57a1dac2672b6c19565b8f75c1815dcb3cb71fe457ef808b59b70f3f (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,491 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.2-py3-none-any.whl#sha256=31f71924b1cabcd3e3e8d8304160de58be7803aeda7d35ec1bf449084f420c3e (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,492 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.3-py3-none-any.whl#sha256=0374fc2b8f2f54ea8e3a5091403798b1bae59166b89fd7cf6eb846f7a3d944b3 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,492 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.4-py3-none-any.whl#sha256=178e6af188bbfa96b5e54a4f0d33b5c5ba607e74cbc67cf85a8aa588e629502c (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,493 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.5-py3-none-any.whl#sha256=a7b054c071f59f03ce6d4e5659c452cb60656f0398728417544674bcf915672f (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,494 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.6-py3-none-any.whl#sha256=a57d1bef0edc28a2c836768c6a4c23146b7702accb38718db86bd7b6fa9d8470 (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,494 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.7-py3-none-any.whl#sha256=ab56e134c46744a1c0b6286cdf17cf65f13ea1c6db1f036c8be5be34f3b754fc (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,495 Skipping link: No binaries permitted for sequana: https://www.piwheels.org/simple/sequana/sequana-0.9.8-py3-none-any.whl#sha256=103274642cdeb6dab96a62b7f0df7cd961d70e3e856823bd6d5ef85b37b0477b (from https://www.piwheels.org/simple/sequana/) 2021-08-26T15:25:01,553 Given no hashes to check 1 links for project 'sequana': discarding no candidates 2021-08-26T15:25:01,586 Collecting sequana==0.12.0 2021-08-26T15:25:01,590 Created temporary directory: /tmp/pip-unpack-jzk1pupy 2021-08-26T15:25:02,264 Downloading sequana-0.12.0.tar.gz (13.7 MB) 2021-08-26T15:25:10,602 Added sequana==0.12.0 from https://files.pythonhosted.org/packages/72/ba/dc49aa94469c1e6eec3327fde67e3e3f271ea052302d1613235b85f09896/sequana-0.12.0.tar.gz#sha256=31e446be35f5b95aa8e58f7a5621f5fda1ad4e6e674151c7a7032b0b26fa06b9 to build tracker '/tmp/pip-req-tracker-x8_h9pti' 2021-08-26T15:25:10,605 Running setup.py (path:/tmp/pip-wheel-5dnvuple/sequana_8d5d0b46afa043f98d387e429e40e9a3/setup.py) egg_info for package sequana 2021-08-26T15:25:10,606 Created temporary directory: /tmp/pip-pip-egg-info-6wv6670f 2021-08-26T15:25:10,607 Running command python setup.py egg_info 2021-08-26T15:25:13,051 running egg_info 2021-08-26T15:25:13,058 creating /tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info 2021-08-26T15:25:13,060 writing requirements to /tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/requires.txt 2021-08-26T15:25:13,063 writing dependency_links to /tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/dependency_links.txt 2021-08-26T15:25:13,069 writing entry points to /tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/entry_points.txt 2021-08-26T15:25:13,071 writing /tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/PKG-INFO 2021-08-26T15:25:13,079 writing top-level names to /tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/top_level.txt 2021-08-26T15:25:13,083 writing manifest file '/tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/SOURCES.txt' 2021-08-26T15:25:14,915 reading manifest file '/tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/SOURCES.txt' 2021-08-26T15:25:14,919 reading manifest template 'MANIFEST.in' 2021-08-26T15:25:14,927 warning: no previously-included files matching '__pycache__' found under directory '*' 2021-08-26T15:25:14,931 warning: no previously-included files matching '*pyc' found under directory '*' 2021-08-26T15:25:15,908 warning: no previously-included files matching '*' found under directory 'sequana/methylation' 2021-08-26T15:25:15,911 warning: no previously-included files matching '*' found under directory 'test' 2021-08-26T15:25:15,914 warning: no previously-included files found matching 'sequana/rm2.py' 2021-08-26T15:25:15,973 writing manifest file '/tmp/pip-pip-egg-info-6wv6670f/sequana.egg-info/SOURCES.txt' 2021-08-26T15:25:16,112 Source in /tmp/pip-wheel-5dnvuple/sequana_8d5d0b46afa043f98d387e429e40e9a3 has version 0.12.0, which satisfies requirement sequana==0.12.0 from https://files.pythonhosted.org/packages/72/ba/dc49aa94469c1e6eec3327fde67e3e3f271ea052302d1613235b85f09896/sequana-0.12.0.tar.gz#sha256=31e446be35f5b95aa8e58f7a5621f5fda1ad4e6e674151c7a7032b0b26fa06b9 2021-08-26T15:25:16,114 Removed sequana==0.12.0 from https://files.pythonhosted.org/packages/72/ba/dc49aa94469c1e6eec3327fde67e3e3f271ea052302d1613235b85f09896/sequana-0.12.0.tar.gz#sha256=31e446be35f5b95aa8e58f7a5621f5fda1ad4e6e674151c7a7032b0b26fa06b9 from build tracker '/tmp/pip-req-tracker-x8_h9pti' 2021-08-26T15:25:16,124 Created temporary directory: /tmp/pip-unpack-rcxbbven 2021-08-26T15:25:16,126 Building wheels for collected packages: sequana 2021-08-26T15:25:16,136 Created temporary directory: /tmp/pip-wheel-t08l_8y3 2021-08-26T15:25:16,137 Building wheel for sequana (setup.py): started 2021-08-26T15:25:16,138 Destination directory: /tmp/pip-wheel-t08l_8y3 2021-08-26T15:25:16,138 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-5dnvuple/sequana_8d5d0b46afa043f98d387e429e40e9a3/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-5dnvuple/sequana_8d5d0b46afa043f98d387e429e40e9a3/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-t08l_8y3 2021-08-26T15:25:18,447 running bdist_wheel 2021-08-26T15:25:18,461 running build 2021-08-26T15:25:18,462 running build_py 2021-08-26T15:25:18,801 creating build 2021-08-26T15:25:18,802 creating build/lib 2021-08-26T15:25:18,804 creating build/lib/sequana 2021-08-26T15:25:18,806 copying sequana/bed.py -> build/lib/sequana 2021-08-26T15:25:18,815 copying sequana/genbank.py -> build/lib/sequana 2021-08-26T15:25:18,821 copying sequana/sequence.py -> build/lib/sequana 2021-08-26T15:25:18,831 copying sequana/rnadiff.py -> build/lib/sequana 2021-08-26T15:25:18,842 copying sequana/pacbio_amplicon.py -> build/lib/sequana 2021-08-26T15:25:18,849 copying sequana/mixture.py -> build/lib/sequana 2021-08-26T15:25:18,856 copying sequana/itol.py -> build/lib/sequana 2021-08-26T15:25:18,863 copying sequana/summary.py -> build/lib/sequana 2021-08-26T15:25:18,870 copying sequana/errors.py -> build/lib/sequana 2021-08-26T15:25:18,876 copying sequana/vcf_filter.py -> build/lib/sequana 2021-08-26T15:25:18,884 copying sequana/tools.py -> build/lib/sequana 2021-08-26T15:25:18,892 copying sequana/phred.py -> build/lib/sequana 2021-08-26T15:25:18,899 copying sequana/fasta.py -> build/lib/sequana 2021-08-26T15:25:18,906 copying sequana/protein.py -> build/lib/sequana 2021-08-26T15:25:18,910 copying sequana/coverage.py -> build/lib/sequana 2021-08-26T15:25:18,916 copying sequana/iem.py -> build/lib/sequana 2021-08-26T15:25:18,921 copying sequana/jsontool.py -> build/lib/sequana 2021-08-26T15:25:18,926 copying sequana/canu_scanner.py -> build/lib/sequana 2021-08-26T15:25:18,932 copying sequana/compare.py -> build/lib/sequana 2021-08-26T15:25:18,940 copying sequana/bamtools.py -> build/lib/sequana 2021-08-26T15:25:18,953 copying sequana/kmer.py -> build/lib/sequana 2021-08-26T15:25:18,958 copying sequana/demultiplex.py -> build/lib/sequana 2021-08-26T15:25:18,965 copying sequana/kegg.py -> build/lib/sequana 2021-08-26T15:25:18,971 copying sequana/bedtools.py -> build/lib/sequana 2021-08-26T15:25:18,985 copying sequana/freebayes_bcf_filter.py -> build/lib/sequana 2021-08-26T15:25:18,993 copying sequana/running_median.py -> build/lib/sequana 2021-08-26T15:25:18,999 copying sequana/fastq.py -> build/lib/sequana 2021-08-26T15:25:19,034 copying sequana/chipseq.py -> build/lib/sequana 2021-08-26T15:25:19,044 copying sequana/mgi.py -> build/lib/sequana 2021-08-26T15:25:19,050 copying sequana/trf.py -> build/lib/sequana 2021-08-26T15:25:19,057 copying sequana/freebayes_vcf_filter.py -> build/lib/sequana 2021-08-26T15:25:19,064 copying sequana/criteria.py -> build/lib/sequana 2021-08-26T15:25:19,071 copying sequana/krona.py -> build/lib/sequana 2021-08-26T15:25:19,077 copying sequana/cpg_islands.py -> build/lib/sequana 2021-08-26T15:25:19,082 copying sequana/vcftools.py -> build/lib/sequana 2021-08-26T15:25:19,088 copying sequana/cigar.py -> build/lib/sequana 2021-08-26T15:25:19,095 copying sequana/fastqc.py -> build/lib/sequana 2021-08-26T15:25:19,100 copying sequana/salmon.py -> build/lib/sequana 2021-08-26T15:25:19,105 copying sequana/taxonomy.py -> build/lib/sequana 2021-08-26T15:25:19,111 copying sequana/find_motif.py -> build/lib/sequana 2021-08-26T15:25:19,117 copying sequana/featurecounts.py -> build/lib/sequana 2021-08-26T15:25:19,124 copying sequana/__init__.py -> build/lib/sequana 2021-08-26T15:25:19,129 copying sequana/mh.py -> build/lib/sequana 2021-08-26T15:25:19,135 copying sequana/pacbio.py -> build/lib/sequana 2021-08-26T15:25:19,143 copying sequana/gtf.py -> build/lib/sequana 2021-08-26T15:25:19,147 copying sequana/lazyimports.py -> build/lib/sequana 2021-08-26T15:25:19,152 copying sequana/snpeff.py -> build/lib/sequana 2021-08-26T15:25:19,158 copying sequana/datatools.py -> build/lib/sequana 2021-08-26T15:25:19,163 copying sequana/cnv.py -> build/lib/sequana 2021-08-26T15:25:19,168 copying sequana/lazy.py -> build/lib/sequana 2021-08-26T15:25:19,173 copying sequana/contigs.py -> build/lib/sequana 2021-08-26T15:25:19,179 copying sequana/stats.py -> build/lib/sequana 2021-08-26T15:25:19,183 copying sequana/gff3.py -> build/lib/sequana 2021-08-26T15:25:19,189 copying sequana/busco.py -> build/lib/sequana 2021-08-26T15:25:19,194 copying sequana/assembly.py -> build/lib/sequana 2021-08-26T15:25:19,200 copying sequana/databases.py -> build/lib/sequana 2021-08-26T15:25:19,207 copying sequana/misc.py -> build/lib/sequana 2021-08-26T15:25:19,212 copying sequana/sniffer.py -> build/lib/sequana 2021-08-26T15:25:19,217 copying sequana/vst.py -> build/lib/sequana 2021-08-26T15:25:19,222 copying sequana/isoseq.py -> build/lib/sequana 2021-08-26T15:25:19,230 copying sequana/iuapc.py -> build/lib/sequana 2021-08-26T15:25:19,238 creating build/lib/sequana/utils 2021-08-26T15:25:19,240 copying sequana/utils/tree.py -> build/lib/sequana/utils 2021-08-26T15:25:19,246 copying sequana/utils/config.py -> build/lib/sequana/utils 2021-08-26T15:25:19,250 copying sequana/utils/singleton.py -> build/lib/sequana/utils 2021-08-26T15:25:19,254 copying sequana/utils/df2html.py -> build/lib/sequana/utils 2021-08-26T15:25:19,258 copying sequana/utils/__init__.py -> build/lib/sequana/utils 2021-08-26T15:25:19,262 copying sequana/utils/datatables_js.py -> build/lib/sequana/utils 2021-08-26T15:25:19,271 creating build/lib/sequana/kraken 2021-08-26T15:25:19,273 copying sequana/kraken/__init__.py -> build/lib/sequana/kraken 2021-08-26T15:25:19,278 copying sequana/kraken/analysis.py -> build/lib/sequana/kraken 2021-08-26T15:25:19,287 copying sequana/kraken/multikraken.py -> build/lib/sequana/kraken 2021-08-26T15:25:19,294 creating build/lib/sequana/scripts 2021-08-26T15:25:19,296 copying sequana/scripts/vcf_filter.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,302 copying sequana/scripts/tools.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,308 copying sequana/scripts/coverage.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,316 copying sequana/scripts/browser.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,322 copying sequana/scripts/mapping.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,328 copying sequana/scripts/main.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,337 copying sequana/scripts/fixR1R2.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,343 copying sequana/scripts/taxonomy.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,350 copying sequana/scripts/start_pipeline.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,355 copying sequana/scripts/__init__.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,359 copying sequana/scripts/substractor.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,366 copying sequana/scripts/lane_merging.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,373 copying sequana/scripts/bam_splitter.py -> build/lib/sequana/scripts 2021-08-26T15:25:19,383 creating build/lib/sequana/multiqc 2021-08-26T15:25:19,385 copying sequana/multiqc/pacbio_amplicon.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,389 copying sequana/multiqc/config.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,393 copying sequana/multiqc/kraken.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,398 copying sequana/multiqc/coverage.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,403 copying sequana/multiqc/laa.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,408 copying sequana/multiqc/isoseq_qc.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,414 copying sequana/multiqc/quality_control.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,421 copying sequana/multiqc/pacbio_qc.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,427 copying sequana/multiqc/__init__.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,432 copying sequana/multiqc/bamtools_stats.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,439 copying sequana/multiqc/plots.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,444 copying sequana/multiqc/isoseq.py -> build/lib/sequana/multiqc 2021-08-26T15:25:19,452 creating build/lib/sequana/resources 2021-08-26T15:25:19,455 copying sequana/resources/__init__.py -> build/lib/sequana/resources 2021-08-26T15:25:19,461 creating build/lib/sequana/plots 2021-08-26T15:25:19,463 copying sequana/plots/canvasjs_linegraph.py -> build/lib/sequana/plots 2021-08-26T15:25:19,468 copying sequana/plots/canvasjs_base.py -> build/lib/sequana/plots 2021-08-26T15:25:19,473 copying sequana/plots/__init__.py -> build/lib/sequana/plots 2021-08-26T15:25:19,478 creating build/lib/sequana/rules 2021-08-26T15:25:19,479 copying sequana/rules/__init__.py -> build/lib/sequana/rules 2021-08-26T15:25:19,486 creating build/lib/sequana/modules_report 2021-08-26T15:25:19,488 copying sequana/modules_report/fastq_stats.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,495 copying sequana/modules_report/phix.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,501 copying sequana/modules_report/rnadiff.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,508 copying sequana/modules_report/summary.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,515 copying sequana/modules_report/kraken.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,522 copying sequana/modules_report/coverage.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,530 copying sequana/modules_report/quast.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,535 copying sequana/modules_report/cutadapt.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,543 copying sequana/modules_report/trf.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,548 copying sequana/modules_report/joint_calling.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,553 copying sequana/modules_report/variant_calling.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,559 copying sequana/modules_report/enrichment.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,567 copying sequana/modules_report/fastqc.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,571 copying sequana/modules_report/bwa_bam_to_fastq.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,575 copying sequana/modules_report/__init__.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,578 copying sequana/modules_report/base_module.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,583 copying sequana/modules_report/pacbio_input_bam.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,588 copying sequana/modules_report/multi_summary.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,595 copying sequana/modules_report/bamqc.py -> build/lib/sequana/modules_report 2021-08-26T15:25:19,603 creating build/lib/sequana/enrichment 2021-08-26T15:25:19,605 copying sequana/enrichment/mart.py -> build/lib/sequana/enrichment 2021-08-26T15:25:19,610 copying sequana/enrichment/kegg.py -> build/lib/sequana/enrichment 2021-08-26T15:25:19,616 copying sequana/enrichment/panther.py -> build/lib/sequana/enrichment 2021-08-26T15:25:19,623 copying sequana/enrichment/__init__.py -> build/lib/sequana/enrichment 2021-08-26T15:25:19,627 copying sequana/enrichment/gsea.py -> build/lib/sequana/enrichment 2021-08-26T15:25:19,637 creating build/lib/sequana/viz 2021-08-26T15:25:19,639 copying sequana/viz/boxplot.py -> build/lib/sequana/viz 2021-08-26T15:25:19,645 copying sequana/viz/dendogram.py -> build/lib/sequana/viz 2021-08-26T15:25:19,650 copying sequana/viz/anova.py -> build/lib/sequana/viz 2021-08-26T15:25:19,654 copying sequana/viz/corrplot.py -> build/lib/sequana/viz 2021-08-26T15:25:19,660 copying sequana/viz/linkage.py -> build/lib/sequana/viz 2021-08-26T15:25:19,664 copying sequana/viz/isomap.py -> build/lib/sequana/viz 2021-08-26T15:25:19,667 copying sequana/viz/mds.py -> build/lib/sequana/viz 2021-08-26T15:25:19,673 copying sequana/viz/heatmap.py -> build/lib/sequana/viz 2021-08-26T15:25:19,681 copying sequana/viz/core.py -> build/lib/sequana/viz 2021-08-26T15:25:19,686 copying sequana/viz/hinton.py -> build/lib/sequana/viz 2021-08-26T15:25:19,690 copying sequana/viz/__init__.py -> build/lib/sequana/viz 2021-08-26T15:25:19,694 copying sequana/viz/clusterisation.py -> build/lib/sequana/viz 2021-08-26T15:25:19,698 copying sequana/viz/scatter.py -> build/lib/sequana/viz 2021-08-26T15:25:19,703 copying sequana/viz/imshow.py -> build/lib/sequana/viz 2021-08-26T15:25:19,707 copying sequana/viz/venn.py -> build/lib/sequana/viz 2021-08-26T15:25:19,713 copying sequana/viz/volcano.py -> build/lib/sequana/viz 2021-08-26T15:25:19,719 copying sequana/viz/pca.py -> build/lib/sequana/viz 2021-08-26T15:25:19,726 copying sequana/viz/hist2d.py -> build/lib/sequana/viz 2021-08-26T15:25:19,733 creating build/lib/sequana/resources/examples 2021-08-26T15:25:19,736 copying sequana/resources/examples/__init__.py -> build/lib/sequana/resources/examples 2021-08-26T15:25:19,742 creating build/lib/sequana/resources/js 2021-08-26T15:25:19,745 copying sequana/resources/js/__init__.py -> build/lib/sequana/resources/js 2021-08-26T15:25:19,750 creating build/lib/sequana/resources/snpeff 2021-08-26T15:25:19,752 copying sequana/resources/snpeff/__init__.py -> build/lib/sequana/resources/snpeff 2021-08-26T15:25:19,757 creating build/lib/sequana/resources/templates 2021-08-26T15:25:19,758 copying sequana/resources/templates/__init__.py -> build/lib/sequana/resources/templates 2021-08-26T15:25:19,763 creating build/lib/sequana/resources/css 2021-08-26T15:25:19,765 copying sequana/resources/css/__init__.py -> build/lib/sequana/resources/css 2021-08-26T15:25:19,769 creating build/lib/sequana/resources/canvas 2021-08-26T15:25:19,772 copying sequana/resources/canvas/__init__.py -> build/lib/sequana/resources/canvas 2021-08-26T15:25:19,777 copying sequana/resources/canvas/bar.py -> build/lib/sequana/resources/canvas 2021-08-26T15:25:19,784 creating build/lib/sequana/resources/busco 2021-08-26T15:25:19,786 copying sequana/resources/busco/__init__.py -> build/lib/sequana/resources/busco 2021-08-26T15:25:19,792 creating build/lib/sequana/resources/testing 2021-08-26T15:25:19,794 copying sequana/resources/testing/__init__.py -> build/lib/sequana/resources/testing 2021-08-26T15:25:19,799 creating build/lib/sequana/resources/doc 2021-08-26T15:25:19,801 copying sequana/resources/doc/__init__.py -> build/lib/sequana/resources/doc 2021-08-26T15:25:19,805 creating build/lib/sequana/resources/images 2021-08-26T15:25:19,807 copying sequana/resources/images/__init__.py -> build/lib/sequana/resources/images 2021-08-26T15:25:19,812 creating build/lib/sequana/resources/data 2021-08-26T15:25:19,814 copying sequana/resources/data/__init__.py -> build/lib/sequana/resources/data 2021-08-26T15:25:19,821 creating build/lib/sequana/resources/testing/featurecounts 2021-08-26T15:25:19,824 copying sequana/resources/testing/featurecounts/__init__.py -> build/lib/sequana/resources/testing/featurecounts 2021-08-26T15:25:19,830 creating build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:19,833 copying sequana/resources/testing/featurecounts/featurecounts_ex1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:19,837 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0 2021-08-26T15:25:19,839 copying sequana/resources/testing/featurecounts/rnaseq_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0 2021-08-26T15:25:19,843 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1 2021-08-26T15:25:19,845 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1 2021-08-26T15:25:19,850 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0 2021-08-26T15:25:19,851 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0 2021-08-26T15:25:19,858 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2 2021-08-26T15:25:19,860 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2 2021-08-26T15:25:19,867 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1 2021-08-26T15:25:19,869 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1 2021-08-26T15:25:19,875 creating build/lib/sequana/rules/idr 2021-08-26T15:25:19,877 copying sequana/rules/idr/__init__.py -> build/lib/sequana/rules/idr 2021-08-26T15:25:19,881 creating build/lib/sequana/rules/sambamba 2021-08-26T15:25:19,883 copying sequana/rules/sambamba/__init__.py -> build/lib/sequana/rules/sambamba 2021-08-26T15:25:19,888 creating build/lib/sequana/rules/deeptools 2021-08-26T15:25:19,889 copying sequana/rules/deeptools/__init__.py -> build/lib/sequana/rules/deeptools 2021-08-26T15:25:19,895 creating build/lib/sequana/rules/SnpEff 2021-08-26T15:25:19,897 copying sequana/rules/SnpEff/__init__.py -> build/lib/sequana/rules/SnpEff 2021-08-26T15:25:19,904 creating build/lib/sequana/rules/Assembly 2021-08-26T15:25:19,906 copying sequana/rules/Assembly/__init__.py -> build/lib/sequana/rules/Assembly 2021-08-26T15:25:19,913 creating build/lib/sequana/rules/codecs 2021-08-26T15:25:19,915 copying sequana/rules/codecs/__init__.py -> build/lib/sequana/rules/codecs 2021-08-26T15:25:19,919 creating build/lib/sequana/rules/Adapters 2021-08-26T15:25:19,921 copying sequana/rules/Adapters/__init__.py -> build/lib/sequana/rules/Adapters 2021-08-26T15:25:19,926 creating build/lib/sequana/rules/Variant_caller 2021-08-26T15:25:19,927 copying sequana/rules/Variant_caller/__init__.py -> build/lib/sequana/rules/Variant_caller 2021-08-26T15:25:19,932 creating build/lib/sequana/rules/picard-tools 2021-08-26T15:25:19,934 copying sequana/rules/picard-tools/__init__.py -> build/lib/sequana/rules/picard-tools 2021-08-26T15:25:19,941 creating build/lib/sequana/rules/Utils 2021-08-26T15:25:19,943 copying sequana/rules/Utils/__init__.py -> build/lib/sequana/rules/Utils 2021-08-26T15:25:19,949 creating build/lib/sequana/rules/Pacbio 2021-08-26T15:25:19,952 copying sequana/rules/Pacbio/__init__.py -> build/lib/sequana/rules/Pacbio 2021-08-26T15:25:20,985 copying sequana/multiqc/multiqc_config.yaml -> build/lib/sequana/multiqc 2021-08-26T15:25:20,990 copying sequana/rules/README.rst -> build/lib/sequana/rules 2021-08-26T15:25:20,994 creating build/lib/sequana/rules/bam_quality_filter 2021-08-26T15:25:20,996 copying sequana/rules/bam_quality_filter/bam_quality_filter.rules -> build/lib/sequana/rules/bam_quality_filter 2021-08-26T15:25:21,001 creating build/lib/sequana/rules/bowtie2_mapping_dynamic 2021-08-26T15:25:21,003 copying sequana/rules/bowtie2_mapping_dynamic/bowtie2_mapping_dynamic.rules -> build/lib/sequana/rules/bowtie2_mapping_dynamic 2021-08-26T15:25:21,009 creating build/lib/sequana/rules/feature_counts_dynamic 2021-08-26T15:25:21,011 copying sequana/rules/feature_counts_dynamic/feature_counts_dynamic.rules -> build/lib/sequana/rules/feature_counts_dynamic 2021-08-26T15:25:21,018 creating build/lib/sequana/rules/fastq_stats_dynamic 2021-08-26T15:25:21,020 copying sequana/rules/fastq_stats_dynamic/fastq_stats_dynamic.rules -> build/lib/sequana/rules/fastq_stats_dynamic 2021-08-26T15:25:21,027 creating build/lib/sequana/rules/salmon_mapping 2021-08-26T15:25:21,029 copying sequana/rules/salmon_mapping/salmon_mapping.rules -> build/lib/sequana/rules/salmon_mapping 2021-08-26T15:25:21,034 creating build/lib/sequana/rules/rulegraph 2021-08-26T15:25:21,036 copying sequana/rules/rulegraph/rulegraph.rules -> build/lib/sequana/rules/rulegraph 2021-08-26T15:25:21,041 creating build/lib/sequana/rules/igvtools 2021-08-26T15:25:21,042 copying sequana/rules/igvtools/igvtools.rules -> build/lib/sequana/rules/igvtools 2021-08-26T15:25:21,048 creating build/lib/sequana/rules/bed_to_gff 2021-08-26T15:25:21,051 copying sequana/rules/bed_to_gff/bed_to_gff.rules -> build/lib/sequana/rules/bed_to_gff 2021-08-26T15:25:21,057 creating build/lib/sequana/rules/bwa_bam_to_fastq 2021-08-26T15:25:21,059 copying sequana/rules/bwa_bam_to_fastq/bwa_bam_to_fastq.rules -> build/lib/sequana/rules/bwa_bam_to_fastq 2021-08-26T15:25:21,066 creating build/lib/sequana/rules/fastq_screen 2021-08-26T15:25:21,068 copying sequana/rules/fastq_screen/fastq_screen.rules -> build/lib/sequana/rules/fastq_screen 2021-08-26T15:25:21,073 creating build/lib/sequana/rules/copy_multiple_files 2021-08-26T15:25:21,075 copying sequana/rules/copy_multiple_files/copy_multiple_files.rules -> build/lib/sequana/rules/copy_multiple_files 2021-08-26T15:25:21,079 creating build/lib/sequana/rules/bowtie2_index_dynamic 2021-08-26T15:25:21,081 copying sequana/rules/bowtie2_index_dynamic/bowtie2_index_dynamic.rules -> build/lib/sequana/rules/bowtie2_index_dynamic 2021-08-26T15:25:21,086 creating build/lib/sequana/rules/bamCoverage 2021-08-26T15:25:21,089 copying sequana/rules/bamCoverage/bamCoverage.rules -> build/lib/sequana/rules/bamCoverage 2021-08-26T15:25:21,096 creating build/lib/sequana/rules/prokka 2021-08-26T15:25:21,098 copying sequana/rules/prokka/prokka.rules -> build/lib/sequana/rules/prokka 2021-08-26T15:25:21,105 creating build/lib/sequana/rules/SARTools 2021-08-26T15:25:21,108 copying sequana/rules/SARTools/SARTools.rules -> build/lib/sequana/rules/SARTools 2021-08-26T15:25:21,114 creating build/lib/sequana/rules/star_index 2021-08-26T15:25:21,115 copying sequana/rules/star_index/star_index.rules -> build/lib/sequana/rules/star_index 2021-08-26T15:25:21,120 creating build/lib/sequana/rules/digital_normalisation 2021-08-26T15:25:21,122 copying sequana/rules/digital_normalisation/digital_normalisation.rules -> build/lib/sequana/rules/digital_normalisation 2021-08-26T15:25:21,127 creating build/lib/sequana/rules/samtools_depth 2021-08-26T15:25:21,130 copying sequana/rules/samtools_depth/samtools_depth.rules -> build/lib/sequana/rules/samtools_depth 2021-08-26T15:25:21,136 creating build/lib/sequana/rules/preSARTools 2021-08-26T15:25:21,139 copying sequana/rules/preSARTools/preSARTools.rules -> build/lib/sequana/rules/preSARTools 2021-08-26T15:25:21,146 creating build/lib/sequana/rules/rnaseqc 2021-08-26T15:25:21,148 copying sequana/rules/rnaseqc/rnaseqc.rules -> build/lib/sequana/rules/rnaseqc 2021-08-26T15:25:21,153 creating build/lib/sequana/rules/tophat_mapping 2021-08-26T15:25:21,155 copying sequana/rules/tophat_mapping/tophat_mapping.rules -> build/lib/sequana/rules/tophat_mapping 2021-08-26T15:25:21,160 creating build/lib/sequana/rules/sequana_coverage 2021-08-26T15:25:21,162 copying sequana/rules/sequana_coverage/sequana_coverage.rules -> build/lib/sequana/rules/sequana_coverage 2021-08-26T15:25:21,168 creating build/lib/sequana/rules/fastq_screen_report 2021-08-26T15:25:21,170 copying sequana/rules/fastq_screen_report/fastq_screen_report.rules -> build/lib/sequana/rules/fastq_screen_report 2021-08-26T15:25:21,177 creating build/lib/sequana/rules/bowtie1_mapping_dynamic 2021-08-26T15:25:21,180 copying sequana/rules/bowtie1_mapping_dynamic/bowtie1_mapping_dynamic.rules -> build/lib/sequana/rules/bowtie1_mapping_dynamic 2021-08-26T15:25:21,187 creating build/lib/sequana/rules/fastq_sampling 2021-08-26T15:25:21,189 copying sequana/rules/fastq_sampling/fastq_sampling.rules -> build/lib/sequana/rules/fastq_sampling 2021-08-26T15:25:21,194 creating build/lib/sequana/rules/samtools_sort 2021-08-26T15:25:21,196 copying sequana/rules/samtools_sort/samtools_sort.rules -> build/lib/sequana/rules/samtools_sort 2021-08-26T15:25:21,201 creating build/lib/sequana/rules/miRNA_count_dynamic 2021-08-26T15:25:21,202 copying sequana/rules/miRNA_count_dynamic/miRNA_count_dynamic.rules -> build/lib/sequana/rules/miRNA_count_dynamic 2021-08-26T15:25:21,207 creating build/lib/sequana/rules/multiqc 2021-08-26T15:25:21,209 copying sequana/rules/multiqc/multiqc.rules -> build/lib/sequana/rules/multiqc 2021-08-26T15:25:21,216 creating build/lib/sequana/rules/falco_dynamic 2021-08-26T15:25:21,218 copying sequana/rules/falco_dynamic/falco_dynamic.rules -> build/lib/sequana/rules/falco_dynamic 2021-08-26T15:25:21,225 creating build/lib/sequana/rules/bowtie1_index_dynamic 2021-08-26T15:25:21,228 copying sequana/rules/bowtie1_index_dynamic/bowtie1_index_dynamic.rules -> build/lib/sequana/rules/bowtie1_index_dynamic 2021-08-26T15:25:21,233 creating build/lib/sequana/rules/spikes_counting 2021-08-26T15:25:21,235 copying sequana/rules/spikes_counting/spikes_counting.rules -> build/lib/sequana/rules/spikes_counting 2021-08-26T15:25:21,240 creating build/lib/sequana/rules/macs3_dynamic 2021-08-26T15:25:21,241 copying sequana/rules/macs3_dynamic/macs3_dynamic.rules -> build/lib/sequana/rules/macs3_dynamic 2021-08-26T15:25:21,247 creating build/lib/sequana/rules/bwa_index 2021-08-26T15:25:21,248 copying sequana/rules/bwa_index/bwa_index.rules -> build/lib/sequana/rules/bwa_index 2021-08-26T15:25:21,254 creating build/lib/sequana/rules/extract_fasta_from_bed 2021-08-26T15:25:21,257 copying sequana/rules/extract_fasta_from_bed/extract_fasta_from_bed.rules -> build/lib/sequana/rules/extract_fasta_from_bed 2021-08-26T15:25:21,263 creating build/lib/sequana/rules/indel_realigner 2021-08-26T15:25:21,266 copying sequana/rules/indel_realigner/indel_realigner.rules -> build/lib/sequana/rules/indel_realigner 2021-08-26T15:25:21,272 creating build/lib/sequana/rules/mapping_analysis 2021-08-26T15:25:21,274 copying sequana/rules/mapping_analysis/mapping_analysis.rules -> build/lib/sequana/rules/mapping_analysis 2021-08-26T15:25:21,279 creating build/lib/sequana/rules/conda 2021-08-26T15:25:21,280 copying sequana/rules/conda/conda.rules -> build/lib/sequana/rules/conda 2021-08-26T15:25:21,285 creating build/lib/sequana/rules/DupRadar 2021-08-26T15:25:21,287 copying sequana/rules/DupRadar/DupRadar.rules -> build/lib/sequana/rules/DupRadar 2021-08-26T15:25:21,292 creating build/lib/sequana/rules/bam_analysis 2021-08-26T15:25:21,294 copying sequana/rules/bam_analysis/bam_analysis.rules -> build/lib/sequana/rules/bam_analysis 2021-08-26T15:25:21,301 creating build/lib/sequana/rules/summary_pipeline 2021-08-26T15:25:21,303 copying sequana/rules/summary_pipeline/summary_pipeline.rules -> build/lib/sequana/rules/summary_pipeline 2021-08-26T15:25:21,310 creating build/lib/sequana/rules/star_mapping 2021-08-26T15:25:21,312 copying sequana/rules/star_mapping/star_mapping.rules -> build/lib/sequana/rules/star_mapping 2021-08-26T15:25:21,317 creating build/lib/sequana/rules/fastp 2021-08-26T15:25:21,318 copying sequana/rules/fastp/fastp.rules -> build/lib/sequana/rules/fastp 2021-08-26T15:25:21,323 creating build/lib/sequana/rules/bowtie2_index 2021-08-26T15:25:21,325 copying sequana/rules/bowtie2_index/bowtie2_index.rules -> build/lib/sequana/rules/bowtie2_index 2021-08-26T15:25:21,330 creating build/lib/sequana/rules/spp 2021-08-26T15:25:21,332 copying sequana/rules/spp/spp.rules -> build/lib/sequana/rules/spp 2021-08-26T15:25:21,339 creating build/lib/sequana/rules/revcomp_rule 2021-08-26T15:25:21,341 copying sequana/rules/revcomp_rule/revcomp_rule.rules -> build/lib/sequana/rules/revcomp_rule 2021-08-26T15:25:21,347 creating build/lib/sequana/rules/format_contigs 2021-08-26T15:25:21,350 copying sequana/rules/format_contigs/format_contigs.rules -> build/lib/sequana/rules/format_contigs 2021-08-26T15:25:21,355 creating build/lib/sequana/rules/feature_counts 2021-08-26T15:25:21,357 copying sequana/rules/feature_counts/feature_counts.rules -> build/lib/sequana/rules/feature_counts 2021-08-26T15:25:21,362 creating build/lib/sequana/rules/fastqc_dynamic 2021-08-26T15:25:21,363 copying sequana/rules/fastqc_dynamic/fastqc_dynamic.rules -> build/lib/sequana/rules/fastqc_dynamic 2021-08-26T15:25:21,368 creating build/lib/sequana/rules/multiqc2 2021-08-26T15:25:21,370 copying sequana/rules/multiqc2/multiqc2.rules -> build/lib/sequana/rules/multiqc2 2021-08-26T15:25:21,377 creating build/lib/sequana/rules/quast 2021-08-26T15:25:21,379 copying sequana/rules/quast/quast.rules -> build/lib/sequana/rules/quast 2021-08-26T15:25:21,386 creating build/lib/sequana/rules/pacbio_quality 2021-08-26T15:25:21,388 copying sequana/rules/pacbio_quality/pacbio_quality.rules -> build/lib/sequana/rules/pacbio_quality 2021-08-26T15:25:21,395 creating build/lib/sequana/rules/salmon_index 2021-08-26T15:25:21,398 copying sequana/rules/salmon_index/salmon_index.rules -> build/lib/sequana/rules/salmon_index 2021-08-26T15:25:21,404 creating build/lib/sequana/rules/dag 2021-08-26T15:25:21,406 copying sequana/rules/dag/dag.rules -> build/lib/sequana/rules/dag 2021-08-26T15:25:21,413 creating build/lib/sequana/rules/bwa_mem_dynamic 2021-08-26T15:25:21,415 copying sequana/rules/bwa_mem_dynamic/bwa_mem_dynamic.rules -> build/lib/sequana/rules/bwa_mem_dynamic 2021-08-26T15:25:21,421 creating build/lib/sequana/rules/remove_blacklist 2021-08-26T15:25:21,422 copying sequana/rules/remove_blacklist/remove_blacklist.rules -> build/lib/sequana/rules/remove_blacklist 2021-08-26T15:25:21,427 creating build/lib/sequana/rules/chipuanar 2021-08-26T15:25:21,429 copying sequana/rules/chipuanar/chipuanar.rules -> build/lib/sequana/rules/chipuanar 2021-08-26T15:25:21,435 creating build/lib/sequana/rules/idr/compute_idr 2021-08-26T15:25:21,437 copying sequana/rules/idr/compute_idr/compute_idr.rules -> build/lib/sequana/rules/idr/compute_idr 2021-08-26T15:25:21,444 creating build/lib/sequana/rules/idr/stats_peakCalling 2021-08-26T15:25:21,446 copying sequana/rules/idr/stats_peakCalling/stats_peakCalling.rules -> build/lib/sequana/rules/idr/stats_peakCalling 2021-08-26T15:25:21,453 creating build/lib/sequana/rules/idr/preIDR_dynamic 2021-08-26T15:25:21,455 copying sequana/rules/idr/preIDR_dynamic/preIDR_dynamic.rules -> build/lib/sequana/rules/idr/preIDR_dynamic 2021-08-26T15:25:21,461 creating build/lib/sequana/rules/idr/union_peaks 2021-08-26T15:25:21,463 copying sequana/rules/idr/union_peaks/union_peaks.rules -> build/lib/sequana/rules/idr/union_peaks 2021-08-26T15:25:21,468 creating build/lib/sequana/rules/idr/intersectionApproach 2021-08-26T15:25:21,469 copying sequana/rules/idr/intersectionApproach/intersectionApproach.rules -> build/lib/sequana/rules/idr/intersectionApproach 2021-08-26T15:25:21,475 creating build/lib/sequana/rules/idr/metrics_peaks 2021-08-26T15:25:21,477 copying sequana/rules/idr/metrics_peaks/metrics_peaks.rules -> build/lib/sequana/rules/idr/metrics_peaks 2021-08-26T15:25:21,484 creating build/lib/sequana/rules/idr/select_peaks 2021-08-26T15:25:21,486 copying sequana/rules/idr/select_peaks/select_peaks.rules -> build/lib/sequana/rules/idr/select_peaks 2021-08-26T15:25:21,493 creating build/lib/sequana/rules/sambamba/sambamba_filter 2021-08-26T15:25:21,495 copying sequana/rules/sambamba/sambamba_filter/sambamba_filter.rules -> build/lib/sequana/rules/sambamba/sambamba_filter 2021-08-26T15:25:21,500 creating build/lib/sequana/rules/sambamba/sambamba_markdup 2021-08-26T15:25:21,502 copying sequana/rules/sambamba/sambamba_markdup/sambamba_markdup.rules -> build/lib/sequana/rules/sambamba/sambamba_markdup 2021-08-26T15:25:21,507 creating build/lib/sequana/rules/deeptools/plotCoverage 2021-08-26T15:25:21,509 copying sequana/rules/deeptools/plotCoverage/plotCoverage.rules -> build/lib/sequana/rules/deeptools/plotCoverage 2021-08-26T15:25:21,514 creating build/lib/sequana/rules/deeptools/multiBamSummary 2021-08-26T15:25:21,515 copying sequana/rules/deeptools/multiBamSummary/multiBamSummary.rules -> build/lib/sequana/rules/deeptools/multiBamSummary 2021-08-26T15:25:21,522 creating build/lib/sequana/rules/deeptools/BamPEFragmentSize 2021-08-26T15:25:21,525 copying sequana/rules/deeptools/BamPEFragmentSize/BamPEFragmentSize.rules -> build/lib/sequana/rules/deeptools/BamPEFragmentSize 2021-08-26T15:25:21,532 creating build/lib/sequana/rules/deeptools/plotCorrelation 2021-08-26T15:25:21,534 copying sequana/rules/deeptools/plotCorrelation/plotCorrelation.rules -> build/lib/sequana/rules/deeptools/plotCorrelation 2021-08-26T15:25:21,540 creating build/lib/sequana/rules/SnpEff/snpeff_dynamic 2021-08-26T15:25:21,542 copying sequana/rules/SnpEff/snpeff_dynamic/snpeff_dynamic.rules -> build/lib/sequana/rules/SnpEff/snpeff_dynamic 2021-08-26T15:25:21,547 creating build/lib/sequana/rules/SnpEff/snpeff_create_database 2021-08-26T15:25:21,549 copying sequana/rules/SnpEff/snpeff_create_database/snpeff_create_database.rules -> build/lib/sequana/rules/SnpEff/snpeff_create_database 2021-08-26T15:25:21,554 creating build/lib/sequana/rules/kraken 2021-08-26T15:25:21,554 creating build/lib/sequana/rules/kraken/1.0 2021-08-26T15:25:21,558 copying sequana/rules/kraken/1.0/kraken.rules -> build/lib/sequana/rules/kraken/1.0 2021-08-26T15:25:21,564 creating build/lib/sequana/rules/kraken/2.0 2021-08-26T15:25:21,567 copying sequana/rules/kraken/2.0/kraken.rules -> build/lib/sequana/rules/kraken/2.0 2021-08-26T15:25:21,574 creating build/lib/sequana/rules/kraken/1.1 2021-08-26T15:25:21,576 copying sequana/rules/kraken/1.1/kraken.rules -> build/lib/sequana/rules/kraken/1.1 2021-08-26T15:25:21,582 creating build/lib/sequana/rules/Assembly/busco_analysis 2021-08-26T15:25:21,584 copying sequana/rules/Assembly/busco_analysis/busco_analysis.rules -> build/lib/sequana/rules/Assembly/busco_analysis 2021-08-26T15:25:21,589 creating build/lib/sequana/rules/Assembly/spades 2021-08-26T15:25:21,590 copying sequana/rules/Assembly/spades/spades.rules -> build/lib/sequana/rules/Assembly/spades 2021-08-26T15:25:21,595 creating build/lib/sequana/rules/Assembly/busco 2021-08-26T15:25:21,598 copying sequana/rules/Assembly/busco/busco.rules -> build/lib/sequana/rules/Assembly/busco 2021-08-26T15:25:21,604 creating build/lib/sequana/rules/Assembly/spades_get_fastq 2021-08-26T15:25:21,607 copying sequana/rules/Assembly/spades_get_fastq/spades_get_fastq.rules -> build/lib/sequana/rules/Assembly/spades_get_fastq 2021-08-26T15:25:21,613 creating build/lib/sequana/rules/Assembly/canu 2021-08-26T15:25:21,616 copying sequana/rules/Assembly/canu/canu.rules -> build/lib/sequana/rules/Assembly/canu 2021-08-26T15:25:21,621 creating build/lib/sequana/rules/codecs/dsrc_to_gz 2021-08-26T15:25:21,622 copying sequana/rules/codecs/dsrc_to_gz/dsrc_to_gz.rules -> build/lib/sequana/rules/codecs/dsrc_to_gz 2021-08-26T15:25:21,627 creating build/lib/sequana/rules/codecs/bz2_to_gz 2021-08-26T15:25:21,629 copying sequana/rules/codecs/bz2_to_gz/bz2_to_gz.rules -> build/lib/sequana/rules/codecs/bz2_to_gz 2021-08-26T15:25:21,634 creating build/lib/sequana/rules/codecs/bam_to_fasta 2021-08-26T15:25:21,636 copying sequana/rules/codecs/bam_to_fasta/bam_to_fasta.rules -> build/lib/sequana/rules/codecs/bam_to_fasta 2021-08-26T15:25:21,642 creating build/lib/sequana/rules/codecs/gz_to_dsrc 2021-08-26T15:25:21,645 copying sequana/rules/codecs/gz_to_dsrc/gz_to_dsrc.rules -> build/lib/sequana/rules/codecs/gz_to_dsrc 2021-08-26T15:25:21,652 creating build/lib/sequana/rules/codecs/dsrc_to_bz2 2021-08-26T15:25:21,654 copying sequana/rules/codecs/dsrc_to_bz2/dsrc_to_bz2.rules -> build/lib/sequana/rules/codecs/dsrc_to_bz2 2021-08-26T15:25:21,661 creating build/lib/sequana/rules/codecs/gz_to_fastq 2021-08-26T15:25:21,663 copying sequana/rules/codecs/gz_to_fastq/gz_to_fastq.rules -> build/lib/sequana/rules/codecs/gz_to_fastq 2021-08-26T15:25:21,670 creating build/lib/sequana/rules/codecs/dsrc_to_fastq 2021-08-26T15:25:21,672 copying sequana/rules/codecs/dsrc_to_fastq/dsrc_to_fastq.rules -> build/lib/sequana/rules/codecs/dsrc_to_fastq 2021-08-26T15:25:21,678 creating build/lib/sequana/rules/codecs/gz_to_bz2 2021-08-26T15:25:21,680 copying sequana/rules/codecs/gz_to_bz2/gz_to_bz2.rules -> build/lib/sequana/rules/codecs/gz_to_bz2 2021-08-26T15:25:21,685 creating build/lib/sequana/rules/codecs/fastq_to_bz2 2021-08-26T15:25:21,687 copying sequana/rules/codecs/fastq_to_bz2/fastq_to_bz2.rules -> build/lib/sequana/rules/codecs/fastq_to_bz2 2021-08-26T15:25:21,691 creating build/lib/sequana/rules/codecs/bz2_to_fastq 2021-08-26T15:25:21,693 copying sequana/rules/codecs/bz2_to_fastq/bz2_to_fastq.rules -> build/lib/sequana/rules/codecs/bz2_to_fastq 2021-08-26T15:25:21,698 creating build/lib/sequana/rules/codecs/fastq_to_dsrc 2021-08-26T15:25:21,700 copying sequana/rules/codecs/fastq_to_dsrc/fastq_to_dsrc.rules -> build/lib/sequana/rules/codecs/fastq_to_dsrc 2021-08-26T15:25:21,706 creating build/lib/sequana/rules/codecs/fastq_to_gz 2021-08-26T15:25:21,709 copying sequana/rules/codecs/fastq_to_gz/fastq_to_gz.rules -> build/lib/sequana/rules/codecs/fastq_to_gz 2021-08-26T15:25:21,715 creating build/lib/sequana/rules/codecs/bz2_to_dsrc 2021-08-26T15:25:21,718 copying sequana/rules/codecs/bz2_to_dsrc/bz2_to_dsrc.rules -> build/lib/sequana/rules/codecs/bz2_to_dsrc 2021-08-26T15:25:21,723 creating build/lib/sequana/rules/peak_calling 2021-08-26T15:25:21,724 creating build/lib/sequana/rules/peak_calling/macs2_dynamic 2021-08-26T15:25:21,726 copying sequana/rules/peak_calling/macs2_dynamic/macs2_dynamic.rules -> build/lib/sequana/rules/peak_calling/macs2_dynamic 2021-08-26T15:25:21,731 creating build/lib/sequana/rules/Adapters/identify_adapters 2021-08-26T15:25:21,733 copying sequana/rules/Adapters/identify_adapters/identify_adapters.rules -> build/lib/sequana/rules/Adapters/identify_adapters 2021-08-26T15:25:21,738 creating build/lib/sequana/rules/Adapters/adapter_removal 2021-08-26T15:25:21,740 copying sequana/rules/Adapters/adapter_removal/adapter_removal.rules -> build/lib/sequana/rules/Adapters/adapter_removal 2021-08-26T15:25:21,747 creating build/lib/sequana/rules/Adapters/alien_trimmer 2021-08-26T15:25:21,749 copying sequana/rules/Adapters/alien_trimmer/alien_trimmer.rules -> build/lib/sequana/rules/Adapters/alien_trimmer 2021-08-26T15:25:21,756 creating build/lib/sequana/rules/Adapters/cutadapt 2021-08-26T15:25:21,758 copying sequana/rules/Adapters/cutadapt/cutadapt.rules -> build/lib/sequana/rules/Adapters/cutadapt 2021-08-26T15:25:21,766 creating build/lib/sequana/rules/multiqc/2.0 2021-08-26T15:25:21,768 copying sequana/rules/multiqc/2.0/multiqc.rules -> build/lib/sequana/rules/multiqc/2.0 2021-08-26T15:25:21,775 creating build/lib/sequana/rules/Variant_caller/joint_freebayes_vcf_filter 2021-08-26T15:25:21,777 copying sequana/rules/Variant_caller/joint_freebayes_vcf_filter/joint_freebayes_vcf_filter.rules -> build/lib/sequana/rules/Variant_caller/joint_freebayes_vcf_filter 2021-08-26T15:25:21,783 creating build/lib/sequana/rules/Variant_caller/freebayes_bcf_filter 2021-08-26T15:25:21,785 copying sequana/rules/Variant_caller/freebayes_bcf_filter/freebayes_bcf_filter.rules -> build/lib/sequana/rules/Variant_caller/freebayes_bcf_filter 2021-08-26T15:25:21,790 creating build/lib/sequana/rules/Variant_caller/joint_freebayes 2021-08-26T15:25:21,791 copying sequana/rules/Variant_caller/joint_freebayes/joint_freebayes.rules -> build/lib/sequana/rules/Variant_caller/joint_freebayes 2021-08-26T15:25:21,797 creating build/lib/sequana/rules/Variant_caller/freebayes 2021-08-26T15:25:21,798 copying sequana/rules/Variant_caller/freebayes/freebayes.rules -> build/lib/sequana/rules/Variant_caller/freebayes 2021-08-26T15:25:21,805 creating build/lib/sequana/rules/Variant_caller/freebayes_vcf_filter 2021-08-26T15:25:21,807 copying sequana/rules/Variant_caller/freebayes_vcf_filter/freebayes_vcf_filter.rules -> build/lib/sequana/rules/Variant_caller/freebayes_vcf_filter 2021-08-26T15:25:21,814 creating build/lib/sequana/rules/picard-tools/add_read_group 2021-08-26T15:25:21,816 copying sequana/rules/picard-tools/add_read_group/add_read_group.rules -> build/lib/sequana/rules/picard-tools/add_read_group 2021-08-26T15:25:21,823 creating build/lib/sequana/rules/picard-tools/CollectInsertSizeMetrics 2021-08-26T15:25:21,826 copying sequana/rules/picard-tools/CollectInsertSizeMetrics/CollectInsertSizeMetrics.rules -> build/lib/sequana/rules/picard-tools/CollectInsertSizeMetrics 2021-08-26T15:25:21,832 creating build/lib/sequana/rules/picard-tools/mark_duplicates_dynamic 2021-08-26T15:25:21,835 copying sequana/rules/picard-tools/mark_duplicates_dynamic/mark_duplicates_dynamic.rules -> build/lib/sequana/rules/picard-tools/mark_duplicates_dynamic 2021-08-26T15:25:21,842 creating build/lib/sequana/rules/picard-tools/reorderSam 2021-08-26T15:25:21,843 copying sequana/rules/picard-tools/reorderSam/reorderSam.rules -> build/lib/sequana/rules/picard-tools/reorderSam 2021-08-26T15:25:21,848 creating build/lib/sequana/rules/picard-tools/create_sequence_dictionary 2021-08-26T15:25:21,850 copying sequana/rules/picard-tools/create_sequence_dictionary/create_sequence_dictionary.rules -> build/lib/sequana/rules/picard-tools/create_sequence_dictionary 2021-08-26T15:25:21,855 creating build/lib/sequana/rules/Utils/dynamic_vcf_to_bcf 2021-08-26T15:25:21,856 copying sequana/rules/Utils/dynamic_vcf_to_bcf/dynamic_vcf_to_bcf.rules -> build/lib/sequana/rules/Utils/dynamic_vcf_to_bcf 2021-08-26T15:25:21,861 creating build/lib/sequana/rules/Utils/dynamic_copy 2021-08-26T15:25:21,864 copying sequana/rules/Utils/dynamic_copy/dynamic_copy.rules -> build/lib/sequana/rules/Utils/dynamic_copy 2021-08-26T15:25:21,870 creating build/lib/sequana/rules/Utils/dynamic_unpigz 2021-08-26T15:25:21,873 copying sequana/rules/Utils/dynamic_unpigz/dynamic_unpigz.rules -> build/lib/sequana/rules/Utils/dynamic_unpigz 2021-08-26T15:25:21,879 creating build/lib/sequana/rules/SnpEff/snpeff 2021-08-26T15:25:21,881 creating build/lib/sequana/rules/SnpEff/snpeff/1.0 2021-08-26T15:25:21,884 copying sequana/rules/SnpEff/snpeff/1.0/snpeff.rules -> build/lib/sequana/rules/SnpEff/snpeff/1.0 2021-08-26T15:25:21,889 creating build/lib/sequana/rules/SnpEff/snpeff/1.1 2021-08-26T15:25:21,891 copying sequana/rules/SnpEff/snpeff/1.1/snpeff.rules -> build/lib/sequana/rules/SnpEff/snpeff/1.1 2021-08-26T15:25:21,896 creating build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta 2021-08-26T15:25:21,897 creating build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2021-08-26T15:25:21,900 copying sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0/snpeff_add_locus_in_fasta.rules -> build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2021-08-26T15:25:21,906 creating build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2021-08-26T15:25:21,909 copying sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1/snpeff_add_locus_in_fasta.rules -> build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2021-08-26T15:25:21,916 copying sequana/resources/examples/README.rst -> build/lib/sequana/resources/examples 2021-08-26T15:25:21,922 copying sequana/resources/examples/test_kraken.out -> build/lib/sequana/resources/examples 2021-08-26T15:25:21,928 copying sequana/resources/examples/test.fastq.gz -> build/lib/sequana/resources/examples 2021-08-26T15:25:21,936 copying sequana/resources/js/papaparse.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:21,944 copying sequana/resources/js/jquery-2.1.1.js -> build/lib/sequana/resources/js 2021-08-26T15:25:21,973 copying sequana/resources/js/canvasjs.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,002 copying sequana/resources/js/bootstrap.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,013 copying sequana/resources/js/dataTables.buttons.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,022 copying sequana/resources/js/jquery-3.2.1.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,036 copying sequana/resources/js/buttons.html5.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,044 copying sequana/resources/js/jquery-3.1.1.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,059 copying sequana/resources/js/jquery-3.5.1.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,076 copying sequana/resources/js/jquery.tocPlugin.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,082 copying sequana/resources/js/jquery.dropdown.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,089 copying sequana/resources/js/jquery.dataTables.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,104 copying sequana/resources/js/buttons.print.min.js -> build/lib/sequana/resources/js 2021-08-26T15:25:22,112 copying sequana/resources/snpeff/snpEff.config -> build/lib/sequana/resources/snpeff 2021-08-26T15:25:22,120 copying sequana/resources/templates/joint_calling.html -> build/lib/sequana/resources/templates 2021-08-26T15:25:22,127 copying sequana/resources/templates/base.html -> build/lib/sequana/resources/templates 2021-08-26T15:25:22,134 copying sequana/resources/templates/standard.html -> build/lib/sequana/resources/templates 2021-08-26T15:25:22,141 copying sequana/resources/templates/rnadiff_light_template.R -> build/lib/sequana/resources/templates 2021-08-26T15:25:22,148 copying sequana/resources/css/buttons.dataTables.min.css -> build/lib/sequana/resources/css 2021-08-26T15:25:22,156 copying sequana/resources/css/jquery.dataTables.min.css -> build/lib/sequana/resources/css 2021-08-26T15:25:22,164 copying sequana/resources/css/bootstrap.min.css -> build/lib/sequana/resources/css 2021-08-26T15:25:22,183 copying sequana/resources/css/report.css -> build/lib/sequana/resources/css 2021-08-26T15:25:22,191 copying sequana/resources/css/jquery.dropdown.min.css -> build/lib/sequana/resources/css 2021-08-26T15:25:22,199 copying sequana/resources/busco/config.ini -> build/lib/sequana/resources/busco 2021-08-26T15:25:22,206 copying sequana/resources/testing/README.rst -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,211 copying sequana/resources/testing/adapters_with_duplicates.fa -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,215 copying sequana/resources/testing/measles.fa -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,222 copying sequana/resources/testing/test_contigs_ex1.fasta -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,232 copying sequana/resources/testing/test_iem_samplesheet_nextseq_single.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,239 copying sequana/resources/testing/summary_bamtools_stats.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,245 copying sequana/resources/testing/test_atropos_se.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,260 copying sequana/resources/testing/test_expdesign_rubicon.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,266 copying sequana/resources/testing/test_pacbio_subreads.bam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,307 copying sequana/resources/testing/test_iem_samplesheet_hiseq_single.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,312 copying sequana/resources/testing/test_measles.sam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,321 copying sequana/resources/testing/test_pacbio_subreads.bam.bai -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,327 copying sequana/resources/testing/test_heatmap.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,333 copying sequana/resources/testing/test_itol_basic.tree.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,339 copying sequana/resources/testing/test.bam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,350 copying sequana/resources/testing/test.sam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,368 copying sequana/resources/testing/test_fastqc_report.zip -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,382 copying sequana/resources/testing/summary_coverage2.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,388 copying sequana/resources/testing/test_measles.cram -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,396 copying sequana/resources/testing/test_atropos_pe.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,403 copying sequana/resources/testing/test_trf1.dat -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,418 copying sequana/resources/testing/test.bam.bai -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,428 copying sequana/resources/testing/test_index_mapper.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,434 copying sequana/resources/testing/summary_coverage1.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,440 copying sequana/resources/testing/test_cutadapt_paired.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,449 copying sequana/resources/testing/test_expdesign_wrong.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,455 copying sequana/resources/testing/test.vcf -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,464 copying sequana/resources/testing/test_krona_k1.tsv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,470 copying sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv.fixed -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,476 copying sequana/resources/testing/test.fastq -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,489 copying sequana/resources/testing/test_dag.ann.dot -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,495 copying sequana/resources/testing/test_mgi.fqStat.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,506 copying sequana/resources/testing/test_laa_amplicon_analysis_summary_bc25.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,513 copying sequana/resources/testing/test_blast_local.xml -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,521 copying sequana/resources/testing/test_iem_samplesheet_misnieq.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,527 copying sequana/resources/testing/test_samplesheet_wrong_characters.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,533 copying sequana/resources/testing/test_iem_samplesheet_iseq100.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,540 copying sequana/resources/testing/summary_pacbio_qc1.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,547 copying sequana/resources/testing/test_atropos_se.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,555 copying sequana/resources/testing/test_taxon_rtd.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,561 copying sequana/resources/testing/test_expdesign_Hm2.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,567 copying sequana/resources/testing/summary_kraken.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,575 copying sequana/resources/testing/test_1_1000.fastq.gz -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,584 copying sequana/resources/testing/test_pacbio_barcode_report.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,591 copying sequana/resources/testing/test_iem_samplesheet_miseq_double.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,597 copying sequana/resources/testing/test.fasta -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,605 copying sequana/resources/testing/test_blast_ebi.xml -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,648 copying sequana/resources/testing/test_summary_module.svg -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,656 copying sequana/resources/testing/measles.fa.fai -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,662 copying sequana/resources/testing/test.fastq.gz -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,671 copying sequana/resources/testing/test_CS_tiny.bam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,680 copying sequana/resources/testing/test_summary_fastq_stats.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,685 copying sequana/resources/testing/test_expdesign_hiseq_doubleindex.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,691 copying sequana/resources/testing/test_measles.bam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,697 copying sequana/resources/testing/test_demultiplex_Stats_undetermined.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,706 copying sequana/resources/testing/test_busco_full_table.tsv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,714 copying sequana/resources/testing/test_demultiplex_Stats.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,725 copying sequana/resources/testing/summary_qc.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,730 copying sequana/resources/testing/test_expdesign_hiseq_duplicated_index.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,734 copying sequana/resources/testing/test_expdesign_miseq_illumina.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,739 copying sequana/resources/testing/test_JB409847.bed -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,781 copying sequana/resources/testing/test_vcf_mpileup_4dot1.vcf -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,797 copying sequana/resources/testing/test_expdesign_miseq_illumina_1.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,803 copying sequana/resources/testing/summary_pacbio_qc2.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,810 copying sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,817 copying sequana/resources/testing/test_sirv.xls -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,850 copying sequana/resources/testing/test_expdesign_miseq_illumina2.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,857 copying sequana/resources/testing/test_kraken.out.summary -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,864 copying sequana/resources/testing/test_isoseq_lq_sirv.bam -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,886 copying sequana/resources/testing/test_snpeff_ref.gb -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,952 copying sequana/resources/testing/test_contigs_spades.fasta -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,959 copying sequana/resources/testing/test_gtf_fixer.gtf -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,963 copying sequana/resources/testing/test_pca.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,983 copying sequana/resources/testing/test_cnvnator.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,990 copying sequana/resources/testing/test_expdesign_generic.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:22,995 copying sequana/resources/testing/test_laa_amplicon_analysis_summary_bc24.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,001 copying sequana/resources/testing/test_atropos_paired.txt -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,010 copying sequana/resources/testing/test_expdesign_hiseq.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,014 copying sequana/resources/testing/test_atropos_pe.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,035 copying sequana/resources/testing/summary_pacbio_qc3.json -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,043 copying sequana/resources/testing/test_coverage.csv -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,080 copying sequana/resources/testing/test_krona_k2.tsv -> build/lib/sequana/resources/testing 2021-08-26T15:25:23,085 copying sequana/resources/testing/featurecounts/README.txt -> build/lib/sequana/resources/testing/featurecounts 2021-08-26T15:25:23,093 copying sequana/resources/testing/featurecounts/featurecounts_ex1/README.txt -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,099 copying sequana/resources/testing/featurecounts/featurecounts_ex1/WT__1_S1_feature.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,107 copying sequana/resources/testing/featurecounts/featurecounts_ex1/WT__2_S2_feature.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,117 copying sequana/resources/testing/featurecounts/featurecounts_ex1/all_features.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,126 copying sequana/resources/testing/featurecounts/featurecounts_ex1/Complemented_csrA_2_S8_feature.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,134 copying sequana/resources/testing/featurecounts/featurecounts_ex1/Complemented_csrA_3_S9_feature.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,142 copying sequana/resources/testing/featurecounts/featurecounts_ex1/Complemented_csrA_1_S7_feature.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,150 copying sequana/resources/testing/featurecounts/featurecounts_ex1/WT__3_S3_feature.out -> build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:23,162 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2 2021-08-26T15:25:23,164 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1 2021-08-26T15:25:23,165 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0 2021-08-26T15:25:23,168 copying sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0 2021-08-26T15:25:23,173 copying sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0 2021-08-26T15:25:23,177 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2 2021-08-26T15:25:23,179 copying sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2 2021-08-26T15:25:23,184 copying sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2 2021-08-26T15:25:23,188 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1 2021-08-26T15:25:23,190 copying sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1 2021-08-26T15:25:23,195 copying sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1 2021-08-26T15:25:23,200 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2 2021-08-26T15:25:23,200 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0 2021-08-26T15:25:23,203 copying sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0 2021-08-26T15:25:23,207 copying sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0 2021-08-26T15:25:23,212 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2 2021-08-26T15:25:23,214 copying sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2 2021-08-26T15:25:23,218 copying sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2 2021-08-26T15:25:23,223 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1 2021-08-26T15:25:23,225 copying sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1 2021-08-26T15:25:23,230 copying sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1 2021-08-26T15:25:23,236 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0 2021-08-26T15:25:23,242 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2 2021-08-26T15:25:23,248 copying sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1 2021-08-26T15:25:23,253 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2 2021-08-26T15:25:23,254 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0 2021-08-26T15:25:23,256 copying sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0 2021-08-26T15:25:23,261 copying sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0 2021-08-26T15:25:23,266 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2 2021-08-26T15:25:23,267 copying sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2 2021-08-26T15:25:23,272 copying sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2 2021-08-26T15:25:23,277 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1 2021-08-26T15:25:23,279 copying sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1 2021-08-26T15:25:23,283 copying sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1 2021-08-26T15:25:23,288 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus 2021-08-26T15:25:23,289 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1 2021-08-26T15:25:23,290 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0 2021-08-26T15:25:23,293 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0 2021-08-26T15:25:23,297 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0 2021-08-26T15:25:23,302 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2 2021-08-26T15:25:23,304 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2 2021-08-26T15:25:23,309 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2 2021-08-26T15:25:23,313 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1 2021-08-26T15:25:23,315 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1 2021-08-26T15:25:23,320 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1 2021-08-26T15:25:23,324 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2 2021-08-26T15:25:23,325 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0 2021-08-26T15:25:23,328 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0 2021-08-26T15:25:23,332 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0 2021-08-26T15:25:23,337 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2 2021-08-26T15:25:23,339 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2 2021-08-26T15:25:23,344 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2 2021-08-26T15:25:23,349 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1 2021-08-26T15:25:23,350 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1 2021-08-26T15:25:23,355 copying sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1 2021-08-26T15:25:23,360 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef 2021-08-26T15:25:23,361 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1 2021-08-26T15:25:23,362 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0 2021-08-26T15:25:23,365 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0 2021-08-26T15:25:23,370 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0 2021-08-26T15:25:23,377 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2 2021-08-26T15:25:23,379 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2 2021-08-26T15:25:23,386 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2 2021-08-26T15:25:23,392 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1 2021-08-26T15:25:23,394 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1 2021-08-26T15:25:23,398 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1 2021-08-26T15:25:23,403 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2 2021-08-26T15:25:23,404 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0 2021-08-26T15:25:23,406 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0 2021-08-26T15:25:23,411 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0 2021-08-26T15:25:23,415 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2 2021-08-26T15:25:23,417 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2 2021-08-26T15:25:23,422 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2 2021-08-26T15:25:23,426 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1 2021-08-26T15:25:23,428 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1 2021-08-26T15:25:23,433 copying sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1 2021-08-26T15:25:23,438 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1 2021-08-26T15:25:23,439 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1 2021-08-26T15:25:23,441 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0 2021-08-26T15:25:23,443 copying sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0 2021-08-26T15:25:23,448 copying sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0 2021-08-26T15:25:23,453 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2 2021-08-26T15:25:23,456 copying sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2 2021-08-26T15:25:23,462 copying sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2 2021-08-26T15:25:23,469 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1 2021-08-26T15:25:23,472 copying sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1 2021-08-26T15:25:23,476 copying sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1 2021-08-26T15:25:23,481 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2 2021-08-26T15:25:23,482 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0 2021-08-26T15:25:23,484 copying sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0 2021-08-26T15:25:23,488 copying sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0 2021-08-26T15:25:23,495 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2 2021-08-26T15:25:23,497 copying sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2 2021-08-26T15:25:23,505 copying sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2 2021-08-26T15:25:23,509 creating build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1 2021-08-26T15:25:23,511 copying sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1/__init__.py -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1 2021-08-26T15:25:23,530 copying sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1/sample_feature.out -> build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1 2021-08-26T15:25:23,537 copying sequana/resources/images/no_data.png -> build/lib/sequana/resources/images 2021-08-26T15:25:23,545 copying sequana/resources/images/Institut_Pasteur.png -> build/lib/sequana/resources/images 2021-08-26T15:25:23,557 copying sequana/resources/images/no_data.jpg -> build/lib/sequana/resources/images 2021-08-26T15:25:23,562 copying sequana/resources/data/README.rst -> build/lib/sequana/resources/data 2021-08-26T15:25:23,567 copying sequana/resources/data/measles.fa -> build/lib/sequana/resources/data 2021-08-26T15:25:23,574 copying sequana/resources/data/SIRV.fa -> build/lib/sequana/resources/data 2021-08-26T15:25:23,586 copying sequana/resources/data/phiX174.fa -> build/lib/sequana/resources/data 2021-08-26T15:25:23,592 copying sequana/resources/data/Hm2_GTGAAA_L005_R1_001.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:23,609 copying sequana/resources/data/panther.csv -> build/lib/sequana/resources/data 2021-08-26T15:25:23,615 copying sequana/resources/data/Hm2_GTGAAA_L005_R2_001.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:23,634 copying sequana/resources/data/JB409847.vc.csv -> build/lib/sequana/resources/data 2021-08-26T15:25:23,641 copying sequana/resources/data/JB409847.filter.vcf -> build/lib/sequana/resources/data 2021-08-26T15:25:23,648 copying sequana/resources/data/measles.fa.sorted.bam.bai -> build/lib/sequana/resources/data 2021-08-26T15:25:23,653 copying sequana/resources/data/JB409847.bed -> build/lib/sequana/resources/data 2021-08-26T15:25:23,694 copying sequana/resources/data/KO_ATCACG_L001_R1_001.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:24,154 copying sequana/resources/data/test_L002_R1_001.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:24,174 copying sequana/resources/data/JB409847.vcf -> build/lib/sequana/resources/data 2021-08-26T15:25:24,183 copying sequana/resources/data/hg38_chr18.bed -> build/lib/sequana/resources/data 2021-08-26T15:25:24,236 copying sequana/resources/data/measles.fa.sorted.bam -> build/lib/sequana/resources/data 2021-08-26T15:25:24,264 copying sequana/resources/data/KO_ATCACG_R1_test.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:24,277 copying sequana/resources/data/test_L001_R1_001.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:24,294 copying sequana/resources/data/JB409847.fasta -> build/lib/sequana/resources/data 2021-08-26T15:25:24,301 copying sequana/resources/data/test_wrong_bed.bed -> build/lib/sequana/resources/data 2021-08-26T15:25:24,307 copying sequana/resources/data/WT_ATCACG_L001_R1_001.fastq.gz -> build/lib/sequana/resources/data 2021-08-26T15:25:24,751 copying sequana/resources/data/kegg.csv -> build/lib/sequana/resources/data 2021-08-26T15:25:24,797 copying sequana/resources/data/test_hg38_chr18.bam -> build/lib/sequana/resources/data 2021-08-26T15:25:24,811 copying sequana/resources/data/JB409847.gbk -> build/lib/sequana/resources/data 2021-08-26T15:25:24,821 copying sequana/resources/data/JB409847.cov.csv -> build/lib/sequana/resources/data 2021-08-26T15:25:24,905 copying sequana/resources/data/lima_output.lbc32--lbc32.ccs.bam -> build/lib/sequana/resources/data 2021-08-26T15:25:24,959 copying sequana/resources/data/JB409847.csv -> build/lib/sequana/resources/data 2021-08-26T15:25:24,968 copying sequana/resources/data/virus.bed -> build/lib/sequana/resources/data 2021-08-26T15:25:25,004 copying sequana/resources/data/JB409847.expected.vcf -> build/lib/sequana/resources/data 2021-08-26T15:25:25,014 copying sequana/resources/data/JB409847.bcf -> build/lib/sequana/resources/data 2021-08-26T15:25:25,096 installing to build/bdist.linux-armv7l/wheel 2021-08-26T15:25:25,096 running install 2021-08-26T15:25:25,100 running install_lib 2021-08-26T15:25:25,109 creating build/bdist.linux-armv7l 2021-08-26T15:25:25,111 creating build/bdist.linux-armv7l/wheel 2021-08-26T15:25:25,117 creating build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,120 copying build/lib/sequana/bed.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,126 copying build/lib/sequana/genbank.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,132 creating build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,134 copying build/lib/sequana/utils/tree.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,142 copying build/lib/sequana/utils/config.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,148 copying build/lib/sequana/utils/singleton.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,154 copying build/lib/sequana/utils/df2html.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,160 copying build/lib/sequana/utils/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,165 copying build/lib/sequana/utils/datatables_js.py -> build/bdist.linux-armv7l/wheel/sequana/utils 2021-08-26T15:25:25,174 copying build/lib/sequana/sequence.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,184 copying build/lib/sequana/rnadiff.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,193 copying build/lib/sequana/pacbio_amplicon.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,199 copying build/lib/sequana/mixture.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,207 copying build/lib/sequana/itol.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,214 copying build/lib/sequana/summary.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,221 copying build/lib/sequana/errors.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,227 copying build/lib/sequana/vcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,235 copying build/lib/sequana/tools.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,244 copying build/lib/sequana/phred.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,251 copying build/lib/sequana/fasta.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,259 copying build/lib/sequana/protein.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,265 copying build/lib/sequana/coverage.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,272 copying build/lib/sequana/iem.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,280 copying build/lib/sequana/jsontool.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,286 copying build/lib/sequana/canu_scanner.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,294 copying build/lib/sequana/compare.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,302 copying build/lib/sequana/bamtools.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,314 copying build/lib/sequana/kmer.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,320 copying build/lib/sequana/demultiplex.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,328 copying build/lib/sequana/kegg.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,334 copying build/lib/sequana/bedtools.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,347 copying build/lib/sequana/freebayes_bcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,352 copying build/lib/sequana/running_median.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,359 creating build/bdist.linux-armv7l/wheel/sequana/kraken 2021-08-26T15:25:25,361 copying build/lib/sequana/kraken/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/kraken 2021-08-26T15:25:25,367 copying build/lib/sequana/kraken/analysis.py -> build/bdist.linux-armv7l/wheel/sequana/kraken 2021-08-26T15:25:25,379 copying build/lib/sequana/kraken/multikraken.py -> build/bdist.linux-armv7l/wheel/sequana/kraken 2021-08-26T15:25:25,386 copying build/lib/sequana/fastq.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,396 copying build/lib/sequana/chipseq.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,406 copying build/lib/sequana/mgi.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,413 copying build/lib/sequana/trf.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,420 copying build/lib/sequana/freebayes_vcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,428 copying build/lib/sequana/criteria.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,436 copying build/lib/sequana/krona.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,444 creating build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,447 copying build/lib/sequana/scripts/vcf_filter.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,455 copying build/lib/sequana/scripts/tools.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,461 copying build/lib/sequana/scripts/coverage.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,469 copying build/lib/sequana/scripts/browser.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,475 copying build/lib/sequana/scripts/mapping.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,482 copying build/lib/sequana/scripts/main.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,493 copying build/lib/sequana/scripts/fixR1R2.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,499 copying build/lib/sequana/scripts/taxonomy.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,507 copying build/lib/sequana/scripts/start_pipeline.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,513 copying build/lib/sequana/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,518 copying build/lib/sequana/scripts/substractor.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,526 copying build/lib/sequana/scripts/lane_merging.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,534 copying build/lib/sequana/scripts/bam_splitter.py -> build/bdist.linux-armv7l/wheel/sequana/scripts 2021-08-26T15:25:25,543 creating build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,546 copying build/lib/sequana/multiqc/pacbio_amplicon.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,553 copying build/lib/sequana/multiqc/config.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,559 copying build/lib/sequana/multiqc/kraken.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,566 copying build/lib/sequana/multiqc/coverage.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,574 copying build/lib/sequana/multiqc/laa.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,581 copying build/lib/sequana/multiqc/isoseq_qc.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,588 copying build/lib/sequana/multiqc/quality_control.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,595 copying build/lib/sequana/multiqc/pacbio_qc.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,603 copying build/lib/sequana/multiqc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,609 copying build/lib/sequana/multiqc/multiqc_config.yaml -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,616 copying build/lib/sequana/multiqc/bamtools_stats.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,624 copying build/lib/sequana/multiqc/plots.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,630 copying build/lib/sequana/multiqc/isoseq.py -> build/bdist.linux-armv7l/wheel/sequana/multiqc 2021-08-26T15:25:25,638 copying build/lib/sequana/cpg_islands.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:25,645 creating build/bdist.linux-armv7l/wheel/sequana/resources 2021-08-26T15:25:25,650 creating build/bdist.linux-armv7l/wheel/sequana/resources/examples 2021-08-26T15:25:25,653 copying build/lib/sequana/resources/examples/test_kraken.out -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2021-08-26T15:25:25,661 copying build/lib/sequana/resources/examples/test.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2021-08-26T15:25:25,670 copying build/lib/sequana/resources/examples/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2021-08-26T15:25:25,675 copying build/lib/sequana/resources/examples/README.rst -> build/bdist.linux-armv7l/wheel/sequana/resources/examples 2021-08-26T15:25:25,684 creating build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,686 copying build/lib/sequana/resources/js/papaparse.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,695 copying build/lib/sequana/resources/js/jquery-2.1.1.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,724 copying build/lib/sequana/resources/js/canvasjs.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,753 copying build/lib/sequana/resources/js/bootstrap.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,764 copying build/lib/sequana/resources/js/dataTables.buttons.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,772 copying build/lib/sequana/resources/js/jquery-3.2.1.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,787 copying build/lib/sequana/resources/js/buttons.html5.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,796 copying build/lib/sequana/resources/js/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,801 copying build/lib/sequana/resources/js/jquery-3.1.1.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,815 copying build/lib/sequana/resources/js/jquery-3.5.1.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,829 copying build/lib/sequana/resources/js/jquery.tocPlugin.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,834 copying build/lib/sequana/resources/js/jquery.dropdown.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,840 copying build/lib/sequana/resources/js/jquery.dataTables.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,855 copying build/lib/sequana/resources/js/buttons.print.min.js -> build/bdist.linux-armv7l/wheel/sequana/resources/js 2021-08-26T15:25:25,864 creating build/bdist.linux-armv7l/wheel/sequana/resources/snpeff 2021-08-26T15:25:25,868 copying build/lib/sequana/resources/snpeff/snpEff.config -> build/bdist.linux-armv7l/wheel/sequana/resources/snpeff 2021-08-26T15:25:25,877 copying build/lib/sequana/resources/snpeff/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/snpeff 2021-08-26T15:25:25,884 creating build/bdist.linux-armv7l/wheel/sequana/resources/templates 2021-08-26T15:25:25,887 copying build/lib/sequana/resources/templates/rnadiff_light_template.R -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2021-08-26T15:25:25,894 copying build/lib/sequana/resources/templates/joint_calling.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2021-08-26T15:25:25,900 copying build/lib/sequana/resources/templates/base.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2021-08-26T15:25:25,907 copying build/lib/sequana/resources/templates/standard.html -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2021-08-26T15:25:25,913 copying build/lib/sequana/resources/templates/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/templates 2021-08-26T15:25:25,920 creating build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,922 copying build/lib/sequana/resources/css/buttons.dataTables.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,931 copying build/lib/sequana/resources/css/jquery.dataTables.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,939 copying build/lib/sequana/resources/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,957 copying build/lib/sequana/resources/css/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,962 copying build/lib/sequana/resources/css/report.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,970 copying build/lib/sequana/resources/css/jquery.dropdown.min.css -> build/bdist.linux-armv7l/wheel/sequana/resources/css 2021-08-26T15:25:25,978 creating build/bdist.linux-armv7l/wheel/sequana/resources/canvas 2021-08-26T15:25:25,980 copying build/lib/sequana/resources/canvas/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/canvas 2021-08-26T15:25:25,986 copying build/lib/sequana/resources/canvas/bar.py -> build/bdist.linux-armv7l/wheel/sequana/resources/canvas 2021-08-26T15:25:25,994 creating build/bdist.linux-armv7l/wheel/sequana/resources/busco 2021-08-26T15:25:25,997 copying build/lib/sequana/resources/busco/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/busco 2021-08-26T15:25:26,002 copying build/lib/sequana/resources/busco/config.ini -> build/bdist.linux-armv7l/wheel/sequana/resources/busco 2021-08-26T15:25:26,009 copying build/lib/sequana/resources/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources 2021-08-26T15:25:26,020 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,022 copying build/lib/sequana/resources/testing/test_contigs_ex1.fasta -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,034 copying build/lib/sequana/resources/testing/test_iem_samplesheet_nextseq_single.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,040 copying build/lib/sequana/resources/testing/adapters_with_duplicates.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,047 copying build/lib/sequana/resources/testing/summary_bamtools_stats.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,052 copying build/lib/sequana/resources/testing/test_atropos_se.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,067 copying build/lib/sequana/resources/testing/test_expdesign_rubicon.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,073 copying build/lib/sequana/resources/testing/test_pacbio_subreads.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,116 copying build/lib/sequana/resources/testing/test_iem_samplesheet_hiseq_single.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,122 copying build/lib/sequana/resources/testing/test_measles.sam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,132 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts 2021-08-26T15:25:26,137 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,140 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/README.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,146 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/WT__1_S1_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,151 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/WT__2_S2_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,158 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,162 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/all_features.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,171 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/Complemented_csrA_2_S8_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,179 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/Complemented_csrA_3_S9_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,186 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/Complemented_csrA_1_S7_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,194 copying build/lib/sequana/resources/testing/featurecounts/featurecounts_ex1/WT__3_S3_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/featurecounts_ex1 2021-08-26T15:25:26,202 copying build/lib/sequana/resources/testing/featurecounts/README.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts 2021-08-26T15:25:26,208 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2 2021-08-26T15:25:26,211 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1 2021-08-26T15:25:26,215 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0 2021-08-26T15:25:26,218 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0 2021-08-26T15:25:26,223 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_0 2021-08-26T15:25:26,231 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2 2021-08-26T15:25:26,234 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2 2021-08-26T15:25:26,240 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_2 2021-08-26T15:25:26,246 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1 2021-08-26T15:25:26,248 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1 2021-08-26T15:25:26,253 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample1/feature_counts_1 2021-08-26T15:25:26,259 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2 2021-08-26T15:25:26,262 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0 2021-08-26T15:25:26,266 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0 2021-08-26T15:25:26,272 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_0 2021-08-26T15:25:26,280 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2 2021-08-26T15:25:26,283 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2 2021-08-26T15:25:26,289 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_2 2021-08-26T15:25:26,298 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1 2021-08-26T15:25:26,300 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1 2021-08-26T15:25:26,306 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_2/sample2/feature_counts_1 2021-08-26T15:25:26,313 copying build/lib/sequana/resources/testing/featurecounts/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts 2021-08-26T15:25:26,320 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0 2021-08-26T15:25:26,324 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1 2021-08-26T15:25:26,328 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0 2021-08-26T15:25:26,331 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0 2021-08-26T15:25:26,335 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_0 2021-08-26T15:25:26,340 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1 2021-08-26T15:25:26,345 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2 2021-08-26T15:25:26,348 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2 2021-08-26T15:25:26,354 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_2 2021-08-26T15:25:26,362 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1 2021-08-26T15:25:26,365 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1 2021-08-26T15:25:26,371 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample1/feature_counts_1 2021-08-26T15:25:26,378 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0 2021-08-26T15:25:26,385 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2 2021-08-26T15:25:26,390 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0 2021-08-26T15:25:26,394 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0 2021-08-26T15:25:26,400 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_0 2021-08-26T15:25:26,408 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2 2021-08-26T15:25:26,411 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2 2021-08-26T15:25:26,417 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_2 2021-08-26T15:25:26,425 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1 2021-08-26T15:25:26,428 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1 2021-08-26T15:25:26,432 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_0/sample2/feature_counts_1 2021-08-26T15:25:26,438 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus 2021-08-26T15:25:26,441 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1 2021-08-26T15:25:26,445 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0 2021-08-26T15:25:26,449 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0 2021-08-26T15:25:26,455 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_0 2021-08-26T15:25:26,463 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2 2021-08-26T15:25:26,466 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2 2021-08-26T15:25:26,472 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_2 2021-08-26T15:25:26,480 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1 2021-08-26T15:25:26,483 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1 2021-08-26T15:25:26,489 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample1/feature_counts_1 2021-08-26T15:25:26,497 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2 2021-08-26T15:25:26,502 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0 2021-08-26T15:25:26,505 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0 2021-08-26T15:25:26,511 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_0 2021-08-26T15:25:26,520 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2 2021-08-26T15:25:26,523 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2 2021-08-26T15:25:26,529 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_2 2021-08-26T15:25:26,537 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1 2021-08-26T15:25:26,540 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1 2021-08-26T15:25:26,546 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_noconsensus/sample2/feature_counts_1 2021-08-26T15:25:26,554 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef 2021-08-26T15:25:26,559 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1 2021-08-26T15:25:26,564 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0 2021-08-26T15:25:26,568 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0 2021-08-26T15:25:26,574 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_0 2021-08-26T15:25:26,582 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2 2021-08-26T15:25:26,585 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2 2021-08-26T15:25:26,591 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_2 2021-08-26T15:25:26,600 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1 2021-08-26T15:25:26,602 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1 2021-08-26T15:25:26,608 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample1/feature_counts_1 2021-08-26T15:25:26,617 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2 2021-08-26T15:25:26,621 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0 2021-08-26T15:25:26,625 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0 2021-08-26T15:25:26,631 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_0 2021-08-26T15:25:26,637 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2 2021-08-26T15:25:26,639 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2 2021-08-26T15:25:26,643 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_2 2021-08-26T15:25:26,649 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1 2021-08-26T15:25:26,651 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1 2021-08-26T15:25:26,658 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_undef/sample2/feature_counts_1 2021-08-26T15:25:26,666 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1 2021-08-26T15:25:26,670 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1 2021-08-26T15:25:26,676 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0 2021-08-26T15:25:26,679 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0 2021-08-26T15:25:26,685 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_0 2021-08-26T15:25:26,694 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2 2021-08-26T15:25:26,697 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2 2021-08-26T15:25:26,702 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_2 2021-08-26T15:25:26,710 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1 2021-08-26T15:25:26,714 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1 2021-08-26T15:25:26,718 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample1/feature_counts_1 2021-08-26T15:25:26,724 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2 2021-08-26T15:25:26,727 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0 2021-08-26T15:25:26,730 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0 2021-08-26T15:25:26,735 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_0 2021-08-26T15:25:26,743 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2 2021-08-26T15:25:26,746 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2 2021-08-26T15:25:26,752 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_2 2021-08-26T15:25:26,759 creating build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1 2021-08-26T15:25:26,761 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1 2021-08-26T15:25:26,765 copying build/lib/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1/sample_feature.out -> build/bdist.linux-armv7l/wheel/sequana/resources/testing/featurecounts/rnaseq_1/sample2/feature_counts_1 2021-08-26T15:25:26,770 copying build/lib/sequana/resources/testing/test_pacbio_subreads.bam.bai -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,774 copying build/lib/sequana/resources/testing/test_heatmap.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,780 copying build/lib/sequana/resources/testing/test_itol_basic.tree.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,786 copying build/lib/sequana/resources/testing/test.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,797 copying build/lib/sequana/resources/testing/test.sam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,812 copying build/lib/sequana/resources/testing/test_fastqc_report.zip -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,826 copying build/lib/sequana/resources/testing/measles.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,834 copying build/lib/sequana/resources/testing/summary_coverage2.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,840 copying build/lib/sequana/resources/testing/test_measles.cram -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,848 copying build/lib/sequana/resources/testing/test_atropos_pe.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,855 copying build/lib/sequana/resources/testing/test_trf1.dat -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,870 copying build/lib/sequana/resources/testing/test.bam.bai -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,876 copying build/lib/sequana/resources/testing/test_index_mapper.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,882 copying build/lib/sequana/resources/testing/summary_coverage1.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,889 copying build/lib/sequana/resources/testing/test_cutadapt_paired.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,898 copying build/lib/sequana/resources/testing/test_expdesign_wrong.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,905 copying build/lib/sequana/resources/testing/test.vcf -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,913 copying build/lib/sequana/resources/testing/test_krona_k1.tsv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,919 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv.fixed -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,925 copying build/lib/sequana/resources/testing/test.fastq -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,939 copying build/lib/sequana/resources/testing/test_dag.ann.dot -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,945 copying build/lib/sequana/resources/testing/test_mgi.fqStat.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,956 copying build/lib/sequana/resources/testing/test_laa_amplicon_analysis_summary_bc25.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,962 copying build/lib/sequana/resources/testing/test_blast_local.xml -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,969 copying build/lib/sequana/resources/testing/test_iem_samplesheet_misnieq.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,975 copying build/lib/sequana/resources/testing/test_samplesheet_wrong_characters.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,981 copying build/lib/sequana/resources/testing/test_iem_samplesheet_iseq100.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,987 copying build/lib/sequana/resources/testing/summary_pacbio_qc1.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:26,995 copying build/lib/sequana/resources/testing/test_atropos_se.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,002 copying build/lib/sequana/resources/testing/test_taxon_rtd.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,008 copying build/lib/sequana/resources/testing/test_expdesign_Hm2.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,014 copying build/lib/sequana/resources/testing/summary_kraken.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,021 copying build/lib/sequana/resources/testing/test_1_1000.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,030 copying build/lib/sequana/resources/testing/test_pacbio_barcode_report.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,038 copying build/lib/sequana/resources/testing/test_iem_samplesheet_miseq_double.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,044 copying build/lib/sequana/resources/testing/test.fasta -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,053 copying build/lib/sequana/resources/testing/test_blast_ebi.xml -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,094 copying build/lib/sequana/resources/testing/test_summary_module.svg -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,102 copying build/lib/sequana/resources/testing/measles.fa.fai -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,108 copying build/lib/sequana/resources/testing/test.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,117 copying build/lib/sequana/resources/testing/test_CS_tiny.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,127 copying build/lib/sequana/resources/testing/test_summary_fastq_stats.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,133 copying build/lib/sequana/resources/testing/test_expdesign_hiseq_doubleindex.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,140 copying build/lib/sequana/resources/testing/test_measles.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,148 copying build/lib/sequana/resources/testing/test_demultiplex_Stats_undetermined.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,154 copying build/lib/sequana/resources/testing/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,159 copying build/lib/sequana/resources/testing/test_busco_full_table.tsv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,167 copying build/lib/sequana/resources/testing/test_demultiplex_Stats.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,180 copying build/lib/sequana/resources/testing/summary_qc.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,186 copying build/lib/sequana/resources/testing/test_expdesign_hiseq_duplicated_index.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,192 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,199 copying build/lib/sequana/resources/testing/test_JB409847.bed -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,241 copying build/lib/sequana/resources/testing/test_vcf_mpileup_4dot1.vcf -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,257 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina_1.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,263 copying build/lib/sequana/resources/testing/summary_pacbio_qc2.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,270 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina_semicommas.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,277 copying build/lib/sequana/resources/testing/test_sirv.xls -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,309 copying build/lib/sequana/resources/testing/test_expdesign_miseq_illumina2.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,317 copying build/lib/sequana/resources/testing/test_kraken.out.summary -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,323 copying build/lib/sequana/resources/testing/test_isoseq_lq_sirv.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,346 copying build/lib/sequana/resources/testing/test_snpeff_ref.gb -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,417 copying build/lib/sequana/resources/testing/test_contigs_spades.fasta -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,425 copying build/lib/sequana/resources/testing/test_gtf_fixer.gtf -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,431 copying build/lib/sequana/resources/testing/test_pca.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,451 copying build/lib/sequana/resources/testing/test_cnvnator.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,455 copying build/lib/sequana/resources/testing/test_expdesign_generic.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,460 copying build/lib/sequana/resources/testing/README.rst -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,465 copying build/lib/sequana/resources/testing/test_laa_amplicon_analysis_summary_bc24.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,469 copying build/lib/sequana/resources/testing/test_atropos_paired.txt -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,479 copying build/lib/sequana/resources/testing/test_expdesign_hiseq.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,484 copying build/lib/sequana/resources/testing/test_atropos_pe.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,506 copying build/lib/sequana/resources/testing/summary_pacbio_qc3.json -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,512 copying build/lib/sequana/resources/testing/test_coverage.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,550 copying build/lib/sequana/resources/testing/test_krona_k2.tsv -> build/bdist.linux-armv7l/wheel/sequana/resources/testing 2021-08-26T15:25:27,556 creating build/bdist.linux-armv7l/wheel/sequana/resources/doc 2021-08-26T15:25:27,557 copying build/lib/sequana/resources/doc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/doc 2021-08-26T15:25:27,563 creating build/bdist.linux-armv7l/wheel/sequana/resources/images 2021-08-26T15:25:27,565 copying build/lib/sequana/resources/images/no_data.png -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2021-08-26T15:25:27,571 copying build/lib/sequana/resources/images/Institut_Pasteur.png -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2021-08-26T15:25:27,581 copying build/lib/sequana/resources/images/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2021-08-26T15:25:27,586 copying build/lib/sequana/resources/images/no_data.jpg -> build/bdist.linux-armv7l/wheel/sequana/resources/images 2021-08-26T15:25:27,595 creating build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,598 copying build/lib/sequana/resources/data/Hm2_GTGAAA_L005_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,617 copying build/lib/sequana/resources/data/panther.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,624 copying build/lib/sequana/resources/data/Hm2_GTGAAA_L005_R2_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,642 copying build/lib/sequana/resources/data/measles.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,651 copying build/lib/sequana/resources/data/JB409847.vc.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,658 copying build/lib/sequana/resources/data/SIRV.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,671 copying build/lib/sequana/resources/data/JB409847.filter.vcf -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,681 copying build/lib/sequana/resources/data/measles.fa.sorted.bam.bai -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,688 copying build/lib/sequana/resources/data/JB409847.bed -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:27,737 copying build/lib/sequana/resources/data/KO_ATCACG_L001_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,196 copying build/lib/sequana/resources/data/test_L002_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,214 copying build/lib/sequana/resources/data/JB409847.vcf -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,222 copying build/lib/sequana/resources/data/hg38_chr18.bed -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,273 copying build/lib/sequana/resources/data/measles.fa.sorted.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,302 copying build/lib/sequana/resources/data/KO_ATCACG_R1_test.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,312 copying build/lib/sequana/resources/data/phiX174.fa -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,319 copying build/lib/sequana/resources/data/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,325 copying build/lib/sequana/resources/data/test_L001_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,342 copying build/lib/sequana/resources/data/JB409847.fasta -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,349 copying build/lib/sequana/resources/data/test_wrong_bed.bed -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,355 copying build/lib/sequana/resources/data/WT_ATCACG_L001_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,804 copying build/lib/sequana/resources/data/kegg.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,844 copying build/lib/sequana/resources/data/test_hg38_chr18.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,854 copying build/lib/sequana/resources/data/JB409847.gbk -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,864 copying build/lib/sequana/resources/data/JB409847.cov.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:28,951 copying build/lib/sequana/resources/data/lima_output.lbc32--lbc32.ccs.bam -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:29,005 copying build/lib/sequana/resources/data/JB409847.csv -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:29,011 copying build/lib/sequana/resources/data/README.rst -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:29,017 copying build/lib/sequana/resources/data/virus.bed -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:29,053 copying build/lib/sequana/resources/data/JB409847.expected.vcf -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:29,061 copying build/lib/sequana/resources/data/JB409847.bcf -> build/bdist.linux-armv7l/wheel/sequana/resources/data 2021-08-26T15:25:29,069 copying build/lib/sequana/vcftools.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:29,075 copying build/lib/sequana/cigar.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:29,082 copying build/lib/sequana/fastqc.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:29,091 creating build/bdist.linux-armv7l/wheel/sequana/plots 2021-08-26T15:25:29,094 copying build/lib/sequana/plots/canvasjs_linegraph.py -> build/bdist.linux-armv7l/wheel/sequana/plots 2021-08-26T15:25:29,102 copying build/lib/sequana/plots/canvasjs_base.py -> build/bdist.linux-armv7l/wheel/sequana/plots 2021-08-26T15:25:29,109 copying build/lib/sequana/plots/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/plots 2021-08-26T15:25:29,114 copying build/lib/sequana/salmon.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:29,127 creating build/bdist.linux-armv7l/wheel/sequana/rules 2021-08-26T15:25:29,131 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr 2021-08-26T15:25:29,136 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/compute_idr 2021-08-26T15:25:29,139 copying build/lib/sequana/rules/idr/compute_idr/compute_idr.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/compute_idr 2021-08-26T15:25:29,148 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/stats_peakCalling 2021-08-26T15:25:29,151 copying build/lib/sequana/rules/idr/stats_peakCalling/stats_peakCalling.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/stats_peakCalling 2021-08-26T15:25:29,159 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/preIDR_dynamic 2021-08-26T15:25:29,162 copying build/lib/sequana/rules/idr/preIDR_dynamic/preIDR_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/preIDR_dynamic 2021-08-26T15:25:29,170 copying build/lib/sequana/rules/idr/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/idr 2021-08-26T15:25:29,176 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/union_peaks 2021-08-26T15:25:29,179 copying build/lib/sequana/rules/idr/union_peaks/union_peaks.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/union_peaks 2021-08-26T15:25:29,187 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/intersectionApproach 2021-08-26T15:25:29,190 copying build/lib/sequana/rules/idr/intersectionApproach/intersectionApproach.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/intersectionApproach 2021-08-26T15:25:29,198 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/metrics_peaks 2021-08-26T15:25:29,201 copying build/lib/sequana/rules/idr/metrics_peaks/metrics_peaks.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/metrics_peaks 2021-08-26T15:25:29,235 creating build/bdist.linux-armv7l/wheel/sequana/rules/idr/select_peaks 2021-08-26T15:25:29,238 copying build/lib/sequana/rules/idr/select_peaks/select_peaks.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/idr/select_peaks 2021-08-26T15:25:29,247 creating build/bdist.linux-armv7l/wheel/sequana/rules/bam_quality_filter 2021-08-26T15:25:29,249 copying build/lib/sequana/rules/bam_quality_filter/bam_quality_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bam_quality_filter 2021-08-26T15:25:29,257 creating build/bdist.linux-armv7l/wheel/sequana/rules/bowtie2_mapping_dynamic 2021-08-26T15:25:29,260 copying build/lib/sequana/rules/bowtie2_mapping_dynamic/bowtie2_mapping_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bowtie2_mapping_dynamic 2021-08-26T15:25:29,271 creating build/bdist.linux-armv7l/wheel/sequana/rules/feature_counts_dynamic 2021-08-26T15:25:29,274 copying build/lib/sequana/rules/feature_counts_dynamic/feature_counts_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/feature_counts_dynamic 2021-08-26T15:25:29,282 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_stats_dynamic 2021-08-26T15:25:29,285 copying build/lib/sequana/rules/fastq_stats_dynamic/fastq_stats_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_stats_dynamic 2021-08-26T15:25:29,294 creating build/bdist.linux-armv7l/wheel/sequana/rules/salmon_mapping 2021-08-26T15:25:29,297 copying build/lib/sequana/rules/salmon_mapping/salmon_mapping.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/salmon_mapping 2021-08-26T15:25:29,305 creating build/bdist.linux-armv7l/wheel/sequana/rules/rulegraph 2021-08-26T15:25:29,308 copying build/lib/sequana/rules/rulegraph/rulegraph.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/rulegraph 2021-08-26T15:25:29,317 creating build/bdist.linux-armv7l/wheel/sequana/rules/igvtools 2021-08-26T15:25:29,320 copying build/lib/sequana/rules/igvtools/igvtools.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/igvtools 2021-08-26T15:25:29,328 creating build/bdist.linux-armv7l/wheel/sequana/rules/bed_to_gff 2021-08-26T15:25:29,331 copying build/lib/sequana/rules/bed_to_gff/bed_to_gff.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bed_to_gff 2021-08-26T15:25:29,339 creating build/bdist.linux-armv7l/wheel/sequana/rules/bwa_bam_to_fastq 2021-08-26T15:25:29,341 copying build/lib/sequana/rules/bwa_bam_to_fastq/bwa_bam_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bwa_bam_to_fastq 2021-08-26T15:25:29,350 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen 2021-08-26T15:25:29,352 copying build/lib/sequana/rules/fastq_screen/fastq_screen.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen 2021-08-26T15:25:29,361 creating build/bdist.linux-armv7l/wheel/sequana/rules/copy_multiple_files 2021-08-26T15:25:29,364 copying build/lib/sequana/rules/copy_multiple_files/copy_multiple_files.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/copy_multiple_files 2021-08-26T15:25:29,372 creating build/bdist.linux-armv7l/wheel/sequana/rules/bowtie2_index_dynamic 2021-08-26T15:25:29,375 copying build/lib/sequana/rules/bowtie2_index_dynamic/bowtie2_index_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bowtie2_index_dynamic 2021-08-26T15:25:29,383 creating build/bdist.linux-armv7l/wheel/sequana/rules/sambamba 2021-08-26T15:25:29,387 creating build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_filter 2021-08-26T15:25:29,391 copying build/lib/sequana/rules/sambamba/sambamba_filter/sambamba_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_filter 2021-08-26T15:25:29,397 copying build/lib/sequana/rules/sambamba/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/sambamba 2021-08-26T15:25:29,404 creating build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_markdup 2021-08-26T15:25:29,412 copying build/lib/sequana/rules/sambamba/sambamba_markdup/sambamba_markdup.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/sambamba/sambamba_markdup 2021-08-26T15:25:29,421 creating build/bdist.linux-armv7l/wheel/sequana/rules/bamCoverage 2021-08-26T15:25:29,424 copying build/lib/sequana/rules/bamCoverage/bamCoverage.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bamCoverage 2021-08-26T15:25:29,432 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools 2021-08-26T15:25:29,437 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCoverage 2021-08-26T15:25:29,440 copying build/lib/sequana/rules/deeptools/plotCoverage/plotCoverage.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCoverage 2021-08-26T15:25:29,449 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/multiBamSummary 2021-08-26T15:25:29,452 copying build/lib/sequana/rules/deeptools/multiBamSummary/multiBamSummary.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/multiBamSummary 2021-08-26T15:25:29,460 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/BamPEFragmentSize 2021-08-26T15:25:29,463 copying build/lib/sequana/rules/deeptools/BamPEFragmentSize/BamPEFragmentSize.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/BamPEFragmentSize 2021-08-26T15:25:29,470 copying build/lib/sequana/rules/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools 2021-08-26T15:25:29,476 creating build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCorrelation 2021-08-26T15:25:29,479 copying build/lib/sequana/rules/deeptools/plotCorrelation/plotCorrelation.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/deeptools/plotCorrelation 2021-08-26T15:25:29,488 creating build/bdist.linux-armv7l/wheel/sequana/rules/prokka 2021-08-26T15:25:29,490 copying build/lib/sequana/rules/prokka/prokka.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/prokka 2021-08-26T15:25:29,499 creating build/bdist.linux-armv7l/wheel/sequana/rules/SARTools 2021-08-26T15:25:29,501 copying build/lib/sequana/rules/SARTools/SARTools.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SARTools 2021-08-26T15:25:29,511 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff 2021-08-26T15:25:29,515 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_dynamic 2021-08-26T15:25:29,519 copying build/lib/sequana/rules/SnpEff/snpeff_dynamic/snpeff_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_dynamic 2021-08-26T15:25:29,527 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff 2021-08-26T15:25:29,531 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.0 2021-08-26T15:25:29,535 copying build/lib/sequana/rules/SnpEff/snpeff/1.0/snpeff.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.0 2021-08-26T15:25:29,543 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.1 2021-08-26T15:25:29,546 copying build/lib/sequana/rules/SnpEff/snpeff/1.1/snpeff.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff/1.1 2021-08-26T15:25:29,554 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta 2021-08-26T15:25:29,559 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2021-08-26T15:25:29,562 copying build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0/snpeff_add_locus_in_fasta.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.0 2021-08-26T15:25:29,571 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2021-08-26T15:25:29,574 copying build/lib/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1/snpeff_add_locus_in_fasta.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_add_locus_in_fasta/1.1 2021-08-26T15:25:29,582 creating build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_create_database 2021-08-26T15:25:29,585 copying build/lib/sequana/rules/SnpEff/snpeff_create_database/snpeff_create_database.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff/snpeff_create_database 2021-08-26T15:25:29,592 copying build/lib/sequana/rules/SnpEff/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/SnpEff 2021-08-26T15:25:29,599 creating build/bdist.linux-armv7l/wheel/sequana/rules/star_index 2021-08-26T15:25:29,601 copying build/lib/sequana/rules/star_index/star_index.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/star_index 2021-08-26T15:25:29,610 creating build/bdist.linux-armv7l/wheel/sequana/rules/digital_normalisation 2021-08-26T15:25:29,612 copying build/lib/sequana/rules/digital_normalisation/digital_normalisation.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/digital_normalisation 2021-08-26T15:25:29,621 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken 2021-08-26T15:25:29,625 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.0 2021-08-26T15:25:29,629 copying build/lib/sequana/rules/kraken/1.0/kraken.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.0 2021-08-26T15:25:29,638 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken/2.0 2021-08-26T15:25:29,640 copying build/lib/sequana/rules/kraken/2.0/kraken.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/kraken/2.0 2021-08-26T15:25:29,649 creating build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.1 2021-08-26T15:25:29,652 copying build/lib/sequana/rules/kraken/1.1/kraken.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/kraken/1.1 2021-08-26T15:25:29,661 creating build/bdist.linux-armv7l/wheel/sequana/rules/samtools_depth 2021-08-26T15:25:29,664 copying build/lib/sequana/rules/samtools_depth/samtools_depth.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/samtools_depth 2021-08-26T15:25:29,672 creating build/bdist.linux-armv7l/wheel/sequana/rules/preSARTools 2021-08-26T15:25:29,675 copying build/lib/sequana/rules/preSARTools/preSARTools.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/preSARTools 2021-08-26T15:25:29,684 creating build/bdist.linux-armv7l/wheel/sequana/rules/Assembly 2021-08-26T15:25:29,688 creating build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/busco_analysis 2021-08-26T15:25:29,691 copying build/lib/sequana/rules/Assembly/busco_analysis/busco_analysis.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/busco_analysis 2021-08-26T15:25:29,700 creating build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/spades 2021-08-26T15:25:29,702 copying build/lib/sequana/rules/Assembly/spades/spades.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/spades 2021-08-26T15:25:29,711 creating build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/busco 2021-08-26T15:25:29,714 copying build/lib/sequana/rules/Assembly/busco/busco.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/busco 2021-08-26T15:25:29,722 creating build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/spades_get_fastq 2021-08-26T15:25:29,725 copying build/lib/sequana/rules/Assembly/spades_get_fastq/spades_get_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/spades_get_fastq 2021-08-26T15:25:29,732 copying build/lib/sequana/rules/Assembly/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/Assembly 2021-08-26T15:25:29,738 creating build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/canu 2021-08-26T15:25:29,741 copying build/lib/sequana/rules/Assembly/canu/canu.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Assembly/canu 2021-08-26T15:25:29,749 creating build/bdist.linux-armv7l/wheel/sequana/rules/rnaseqc 2021-08-26T15:25:29,752 copying build/lib/sequana/rules/rnaseqc/rnaseqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/rnaseqc 2021-08-26T15:25:29,760 creating build/bdist.linux-armv7l/wheel/sequana/rules/tophat_mapping 2021-08-26T15:25:29,763 copying build/lib/sequana/rules/tophat_mapping/tophat_mapping.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/tophat_mapping 2021-08-26T15:25:29,771 creating build/bdist.linux-armv7l/wheel/sequana/rules/sequana_coverage 2021-08-26T15:25:29,774 copying build/lib/sequana/rules/sequana_coverage/sequana_coverage.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/sequana_coverage 2021-08-26T15:25:29,783 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen_report 2021-08-26T15:25:29,786 copying build/lib/sequana/rules/fastq_screen_report/fastq_screen_report.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_screen_report 2021-08-26T15:25:29,795 creating build/bdist.linux-armv7l/wheel/sequana/rules/bowtie1_mapping_dynamic 2021-08-26T15:25:29,798 copying build/lib/sequana/rules/bowtie1_mapping_dynamic/bowtie1_mapping_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bowtie1_mapping_dynamic 2021-08-26T15:25:29,807 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs 2021-08-26T15:25:29,811 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_gz 2021-08-26T15:25:29,814 copying build/lib/sequana/rules/codecs/dsrc_to_gz/dsrc_to_gz.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_gz 2021-08-26T15:25:29,823 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_gz 2021-08-26T15:25:29,825 copying build/lib/sequana/rules/codecs/bz2_to_gz/bz2_to_gz.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_gz 2021-08-26T15:25:29,834 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bam_to_fasta 2021-08-26T15:25:29,837 copying build/lib/sequana/rules/codecs/bam_to_fasta/bam_to_fasta.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bam_to_fasta 2021-08-26T15:25:29,845 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_dsrc 2021-08-26T15:25:29,848 copying build/lib/sequana/rules/codecs/gz_to_dsrc/gz_to_dsrc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_dsrc 2021-08-26T15:25:29,857 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_bz2 2021-08-26T15:25:29,860 copying build/lib/sequana/rules/codecs/dsrc_to_bz2/dsrc_to_bz2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_bz2 2021-08-26T15:25:29,868 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_fastq 2021-08-26T15:25:29,871 copying build/lib/sequana/rules/codecs/gz_to_fastq/gz_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_fastq 2021-08-26T15:25:29,880 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_fastq 2021-08-26T15:25:29,883 copying build/lib/sequana/rules/codecs/dsrc_to_fastq/dsrc_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/dsrc_to_fastq 2021-08-26T15:25:29,891 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_bz2 2021-08-26T15:25:29,894 copying build/lib/sequana/rules/codecs/gz_to_bz2/gz_to_bz2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/gz_to_bz2 2021-08-26T15:25:29,901 copying build/lib/sequana/rules/codecs/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs 2021-08-26T15:25:29,907 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_bz2 2021-08-26T15:25:29,910 copying build/lib/sequana/rules/codecs/fastq_to_bz2/fastq_to_bz2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_bz2 2021-08-26T15:25:29,918 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_fastq 2021-08-26T15:25:29,921 copying build/lib/sequana/rules/codecs/bz2_to_fastq/bz2_to_fastq.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_fastq 2021-08-26T15:25:29,930 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_dsrc 2021-08-26T15:25:29,933 copying build/lib/sequana/rules/codecs/fastq_to_dsrc/fastq_to_dsrc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_dsrc 2021-08-26T15:25:29,941 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_gz 2021-08-26T15:25:29,944 copying build/lib/sequana/rules/codecs/fastq_to_gz/fastq_to_gz.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/fastq_to_gz 2021-08-26T15:25:29,953 creating build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_dsrc 2021-08-26T15:25:29,956 copying build/lib/sequana/rules/codecs/bz2_to_dsrc/bz2_to_dsrc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/codecs/bz2_to_dsrc 2021-08-26T15:25:29,965 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastq_sampling 2021-08-26T15:25:29,968 copying build/lib/sequana/rules/fastq_sampling/fastq_sampling.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastq_sampling 2021-08-26T15:25:29,981 creating build/bdist.linux-armv7l/wheel/sequana/rules/peak_calling 2021-08-26T15:25:29,985 creating build/bdist.linux-armv7l/wheel/sequana/rules/peak_calling/macs2_dynamic 2021-08-26T15:25:29,989 copying build/lib/sequana/rules/peak_calling/macs2_dynamic/macs2_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/peak_calling/macs2_dynamic 2021-08-26T15:25:29,997 creating build/bdist.linux-armv7l/wheel/sequana/rules/samtools_sort 2021-08-26T15:25:29,1000 copying build/lib/sequana/rules/samtools_sort/samtools_sort.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/samtools_sort 2021-08-26T15:25:30,008 creating build/bdist.linux-armv7l/wheel/sequana/rules/miRNA_count_dynamic 2021-08-26T15:25:30,011 copying build/lib/sequana/rules/miRNA_count_dynamic/miRNA_count_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/miRNA_count_dynamic 2021-08-26T15:25:30,020 creating build/bdist.linux-armv7l/wheel/sequana/rules/Adapters 2021-08-26T15:25:30,024 creating build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/identify_adapters 2021-08-26T15:25:30,028 copying build/lib/sequana/rules/Adapters/identify_adapters/identify_adapters.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/identify_adapters 2021-08-26T15:25:30,036 creating build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/adapter_removal 2021-08-26T15:25:30,062 copying build/lib/sequana/rules/Adapters/adapter_removal/adapter_removal.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/adapter_removal 2021-08-26T15:25:30,075 creating build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/alien_trimmer 2021-08-26T15:25:30,078 copying build/lib/sequana/rules/Adapters/alien_trimmer/alien_trimmer.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/alien_trimmer 2021-08-26T15:25:30,085 copying build/lib/sequana/rules/Adapters/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/Adapters 2021-08-26T15:25:30,092 creating build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/cutadapt 2021-08-26T15:25:30,098 copying build/lib/sequana/rules/Adapters/cutadapt/cutadapt.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Adapters/cutadapt 2021-08-26T15:25:30,108 creating build/bdist.linux-armv7l/wheel/sequana/rules/multiqc 2021-08-26T15:25:30,111 copying build/lib/sequana/rules/multiqc/multiqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/multiqc 2021-08-26T15:25:30,120 creating build/bdist.linux-armv7l/wheel/sequana/rules/multiqc/2.0 2021-08-26T15:25:30,124 copying build/lib/sequana/rules/multiqc/2.0/multiqc.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/multiqc/2.0 2021-08-26T15:25:30,133 creating build/bdist.linux-armv7l/wheel/sequana/rules/falco_dynamic 2021-08-26T15:25:30,138 copying build/lib/sequana/rules/falco_dynamic/falco_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/falco_dynamic 2021-08-26T15:25:30,145 creating build/bdist.linux-armv7l/wheel/sequana/rules/bowtie1_index_dynamic 2021-08-26T15:25:30,148 copying build/lib/sequana/rules/bowtie1_index_dynamic/bowtie1_index_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bowtie1_index_dynamic 2021-08-26T15:25:30,155 creating build/bdist.linux-armv7l/wheel/sequana/rules/spikes_counting 2021-08-26T15:25:30,159 copying build/lib/sequana/rules/spikes_counting/spikes_counting.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/spikes_counting 2021-08-26T15:25:30,168 creating build/bdist.linux-armv7l/wheel/sequana/rules/macs3_dynamic 2021-08-26T15:25:30,172 copying build/lib/sequana/rules/macs3_dynamic/macs3_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/macs3_dynamic 2021-08-26T15:25:30,181 creating build/bdist.linux-armv7l/wheel/sequana/rules/bwa_index 2021-08-26T15:25:30,184 copying build/lib/sequana/rules/bwa_index/bwa_index.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bwa_index 2021-08-26T15:25:30,192 creating build/bdist.linux-armv7l/wheel/sequana/rules/extract_fasta_from_bed 2021-08-26T15:25:30,195 copying build/lib/sequana/rules/extract_fasta_from_bed/extract_fasta_from_bed.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/extract_fasta_from_bed 2021-08-26T15:25:30,204 creating build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller 2021-08-26T15:25:30,210 creating build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/joint_freebayes_vcf_filter 2021-08-26T15:25:30,215 copying build/lib/sequana/rules/Variant_caller/joint_freebayes_vcf_filter/joint_freebayes_vcf_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/joint_freebayes_vcf_filter 2021-08-26T15:25:30,223 creating build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/freebayes_bcf_filter 2021-08-26T15:25:30,226 copying build/lib/sequana/rules/Variant_caller/freebayes_bcf_filter/freebayes_bcf_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/freebayes_bcf_filter 2021-08-26T15:25:30,234 creating build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/joint_freebayes 2021-08-26T15:25:30,236 copying build/lib/sequana/rules/Variant_caller/joint_freebayes/joint_freebayes.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/joint_freebayes 2021-08-26T15:25:30,245 creating build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/freebayes 2021-08-26T15:25:30,249 copying build/lib/sequana/rules/Variant_caller/freebayes/freebayes.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/freebayes 2021-08-26T15:25:30,259 creating build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/freebayes_vcf_filter 2021-08-26T15:25:30,263 copying build/lib/sequana/rules/Variant_caller/freebayes_vcf_filter/freebayes_vcf_filter.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller/freebayes_vcf_filter 2021-08-26T15:25:30,269 copying build/lib/sequana/rules/Variant_caller/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/Variant_caller 2021-08-26T15:25:30,275 creating build/bdist.linux-armv7l/wheel/sequana/rules/indel_realigner 2021-08-26T15:25:30,277 copying build/lib/sequana/rules/indel_realigner/indel_realigner.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/indel_realigner 2021-08-26T15:25:30,286 creating build/bdist.linux-armv7l/wheel/sequana/rules/mapping_analysis 2021-08-26T15:25:30,290 copying build/lib/sequana/rules/mapping_analysis/mapping_analysis.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/mapping_analysis 2021-08-26T15:25:30,300 creating build/bdist.linux-armv7l/wheel/sequana/rules/conda 2021-08-26T15:25:30,304 copying build/lib/sequana/rules/conda/conda.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/conda 2021-08-26T15:25:30,310 creating build/bdist.linux-armv7l/wheel/sequana/rules/DupRadar 2021-08-26T15:25:30,313 copying build/lib/sequana/rules/DupRadar/DupRadar.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/DupRadar 2021-08-26T15:25:30,320 creating build/bdist.linux-armv7l/wheel/sequana/rules/bam_analysis 2021-08-26T15:25:30,324 copying build/lib/sequana/rules/bam_analysis/bam_analysis.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bam_analysis 2021-08-26T15:25:30,333 creating build/bdist.linux-armv7l/wheel/sequana/rules/summary_pipeline 2021-08-26T15:25:30,336 copying build/lib/sequana/rules/summary_pipeline/summary_pipeline.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/summary_pipeline 2021-08-26T15:25:30,343 copying build/lib/sequana/rules/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules 2021-08-26T15:25:30,349 creating build/bdist.linux-armv7l/wheel/sequana/rules/star_mapping 2021-08-26T15:25:30,352 copying build/lib/sequana/rules/star_mapping/star_mapping.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/star_mapping 2021-08-26T15:25:30,361 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastp 2021-08-26T15:25:30,364 copying build/lib/sequana/rules/fastp/fastp.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastp 2021-08-26T15:25:30,370 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools 2021-08-26T15:25:30,374 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/add_read_group 2021-08-26T15:25:30,376 copying build/lib/sequana/rules/picard-tools/add_read_group/add_read_group.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/add_read_group 2021-08-26T15:25:30,382 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/CollectInsertSizeMetrics 2021-08-26T15:25:30,385 copying build/lib/sequana/rules/picard-tools/CollectInsertSizeMetrics/CollectInsertSizeMetrics.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/CollectInsertSizeMetrics 2021-08-26T15:25:30,391 copying build/lib/sequana/rules/picard-tools/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools 2021-08-26T15:25:30,398 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/mark_duplicates_dynamic 2021-08-26T15:25:30,401 copying build/lib/sequana/rules/picard-tools/mark_duplicates_dynamic/mark_duplicates_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/mark_duplicates_dynamic 2021-08-26T15:25:30,408 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/reorderSam 2021-08-26T15:25:30,410 copying build/lib/sequana/rules/picard-tools/reorderSam/reorderSam.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/reorderSam 2021-08-26T15:25:30,416 creating build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/create_sequence_dictionary 2021-08-26T15:25:30,418 copying build/lib/sequana/rules/picard-tools/create_sequence_dictionary/create_sequence_dictionary.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/picard-tools/create_sequence_dictionary 2021-08-26T15:25:30,425 creating build/bdist.linux-armv7l/wheel/sequana/rules/bowtie2_index 2021-08-26T15:25:30,428 copying build/lib/sequana/rules/bowtie2_index/bowtie2_index.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bowtie2_index 2021-08-26T15:25:30,437 creating build/bdist.linux-armv7l/wheel/sequana/rules/spp 2021-08-26T15:25:30,440 copying build/lib/sequana/rules/spp/spp.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/spp 2021-08-26T15:25:30,447 creating build/bdist.linux-armv7l/wheel/sequana/rules/revcomp_rule 2021-08-26T15:25:30,449 copying build/lib/sequana/rules/revcomp_rule/revcomp_rule.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/revcomp_rule 2021-08-26T15:25:30,455 creating build/bdist.linux-armv7l/wheel/sequana/rules/format_contigs 2021-08-26T15:25:30,457 copying build/lib/sequana/rules/format_contigs/format_contigs.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/format_contigs 2021-08-26T15:25:30,464 creating build/bdist.linux-armv7l/wheel/sequana/rules/Utils 2021-08-26T15:25:30,468 creating build/bdist.linux-armv7l/wheel/sequana/rules/Utils/dynamic_vcf_to_bcf 2021-08-26T15:25:30,471 copying build/lib/sequana/rules/Utils/dynamic_vcf_to_bcf/dynamic_vcf_to_bcf.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Utils/dynamic_vcf_to_bcf 2021-08-26T15:25:30,478 copying build/lib/sequana/rules/Utils/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/Utils 2021-08-26T15:25:30,485 creating build/bdist.linux-armv7l/wheel/sequana/rules/Utils/dynamic_copy 2021-08-26T15:25:30,487 copying build/lib/sequana/rules/Utils/dynamic_copy/dynamic_copy.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Utils/dynamic_copy 2021-08-26T15:25:30,493 creating build/bdist.linux-armv7l/wheel/sequana/rules/Utils/dynamic_unpigz 2021-08-26T15:25:30,495 copying build/lib/sequana/rules/Utils/dynamic_unpigz/dynamic_unpigz.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/Utils/dynamic_unpigz 2021-08-26T15:25:30,501 creating build/bdist.linux-armv7l/wheel/sequana/rules/feature_counts 2021-08-26T15:25:30,503 copying build/lib/sequana/rules/feature_counts/feature_counts.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/feature_counts 2021-08-26T15:25:30,510 creating build/bdist.linux-armv7l/wheel/sequana/rules/fastqc_dynamic 2021-08-26T15:25:30,513 copying build/lib/sequana/rules/fastqc_dynamic/fastqc_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/fastqc_dynamic 2021-08-26T15:25:30,522 creating build/bdist.linux-armv7l/wheel/sequana/rules/multiqc2 2021-08-26T15:25:30,525 copying build/lib/sequana/rules/multiqc2/multiqc2.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/multiqc2 2021-08-26T15:25:30,531 creating build/bdist.linux-armv7l/wheel/sequana/rules/Pacbio 2021-08-26T15:25:30,533 copying build/lib/sequana/rules/Pacbio/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/rules/Pacbio 2021-08-26T15:25:30,539 creating build/bdist.linux-armv7l/wheel/sequana/rules/quast 2021-08-26T15:25:30,540 copying build/lib/sequana/rules/quast/quast.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/quast 2021-08-26T15:25:30,548 creating build/bdist.linux-armv7l/wheel/sequana/rules/pacbio_quality 2021-08-26T15:25:30,551 copying build/lib/sequana/rules/pacbio_quality/pacbio_quality.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/pacbio_quality 2021-08-26T15:25:30,558 copying build/lib/sequana/rules/README.rst -> build/bdist.linux-armv7l/wheel/sequana/rules 2021-08-26T15:25:30,566 creating build/bdist.linux-armv7l/wheel/sequana/rules/salmon_index 2021-08-26T15:25:30,568 copying build/lib/sequana/rules/salmon_index/salmon_index.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/salmon_index 2021-08-26T15:25:30,574 creating build/bdist.linux-armv7l/wheel/sequana/rules/dag 2021-08-26T15:25:30,576 copying build/lib/sequana/rules/dag/dag.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/dag 2021-08-26T15:25:30,582 creating build/bdist.linux-armv7l/wheel/sequana/rules/bwa_mem_dynamic 2021-08-26T15:25:30,584 copying build/lib/sequana/rules/bwa_mem_dynamic/bwa_mem_dynamic.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/bwa_mem_dynamic 2021-08-26T15:25:30,594 creating build/bdist.linux-armv7l/wheel/sequana/rules/remove_blacklist 2021-08-26T15:25:30,596 copying build/lib/sequana/rules/remove_blacklist/remove_blacklist.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/remove_blacklist 2021-08-26T15:25:30,605 creating build/bdist.linux-armv7l/wheel/sequana/rules/chipuanar 2021-08-26T15:25:30,608 copying build/lib/sequana/rules/chipuanar/chipuanar.rules -> build/bdist.linux-armv7l/wheel/sequana/rules/chipuanar 2021-08-26T15:25:30,614 copying build/lib/sequana/taxonomy.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,620 copying build/lib/sequana/find_motif.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,626 copying build/lib/sequana/featurecounts.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,634 copying build/lib/sequana/__init__.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,641 copying build/lib/sequana/mh.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,648 copying build/lib/sequana/pacbio.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,657 copying build/lib/sequana/gtf.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,661 copying build/lib/sequana/lazyimports.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,666 copying build/lib/sequana/snpeff.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,674 copying build/lib/sequana/datatools.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,682 creating build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,686 copying build/lib/sequana/modules_report/fastq_stats.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,693 copying build/lib/sequana/modules_report/phix.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,698 copying build/lib/sequana/modules_report/rnadiff.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,705 copying build/lib/sequana/modules_report/summary.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,712 copying build/lib/sequana/modules_report/kraken.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,720 copying build/lib/sequana/modules_report/coverage.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,729 copying build/lib/sequana/modules_report/quast.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,734 copying build/lib/sequana/modules_report/cutadapt.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,740 copying build/lib/sequana/modules_report/trf.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,745 copying build/lib/sequana/modules_report/joint_calling.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,750 copying build/lib/sequana/modules_report/variant_calling.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,757 copying build/lib/sequana/modules_report/enrichment.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,766 copying build/lib/sequana/modules_report/fastqc.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,771 copying build/lib/sequana/modules_report/bwa_bam_to_fastq.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,776 copying build/lib/sequana/modules_report/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,780 copying build/lib/sequana/modules_report/base_module.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,786 copying build/lib/sequana/modules_report/pacbio_input_bam.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,792 copying build/lib/sequana/modules_report/multi_summary.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,800 copying build/lib/sequana/modules_report/bamqc.py -> build/bdist.linux-armv7l/wheel/sequana/modules_report 2021-08-26T15:25:30,806 copying build/lib/sequana/cnv.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,812 copying build/lib/sequana/lazy.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,818 copying build/lib/sequana/contigs.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,825 copying build/lib/sequana/stats.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,832 copying build/lib/sequana/gff3.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,842 creating build/bdist.linux-armv7l/wheel/sequana/enrichment 2021-08-26T15:25:30,845 copying build/lib/sequana/enrichment/mart.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2021-08-26T15:25:30,852 copying build/lib/sequana/enrichment/kegg.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2021-08-26T15:25:30,861 copying build/lib/sequana/enrichment/panther.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2021-08-26T15:25:30,871 copying build/lib/sequana/enrichment/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2021-08-26T15:25:30,877 copying build/lib/sequana/enrichment/gsea.py -> build/bdist.linux-armv7l/wheel/sequana/enrichment 2021-08-26T15:25:30,883 copying build/lib/sequana/busco.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,891 copying build/lib/sequana/assembly.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,898 copying build/lib/sequana/databases.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,906 copying build/lib/sequana/misc.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,912 copying build/lib/sequana/sniffer.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,919 copying build/lib/sequana/vst.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:30,927 creating build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,930 copying build/lib/sequana/viz/boxplot.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,937 copying build/lib/sequana/viz/dendogram.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,944 copying build/lib/sequana/viz/anova.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,950 copying build/lib/sequana/viz/corrplot.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,958 copying build/lib/sequana/viz/linkage.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,963 copying build/lib/sequana/viz/isomap.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,969 copying build/lib/sequana/viz/mds.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,975 copying build/lib/sequana/viz/heatmap.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,981 copying build/lib/sequana/viz/core.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,985 copying build/lib/sequana/viz/hinton.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,989 copying build/lib/sequana/viz/__init__.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,993 copying build/lib/sequana/viz/clusterisation.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:30,999 copying build/lib/sequana/viz/scatter.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:31,005 copying build/lib/sequana/viz/imshow.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:31,011 copying build/lib/sequana/viz/venn.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:31,016 copying build/lib/sequana/viz/volcano.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:31,023 copying build/lib/sequana/viz/pca.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:31,029 copying build/lib/sequana/viz/hist2d.py -> build/bdist.linux-armv7l/wheel/sequana/viz 2021-08-26T15:25:31,036 copying build/lib/sequana/isoseq.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:31,044 copying build/lib/sequana/iuapc.py -> build/bdist.linux-armv7l/wheel/sequana 2021-08-26T15:25:31,049 running install_egg_info 2021-08-26T15:25:31,094 running egg_info 2021-08-26T15:25:31,096 writing requirements to sequana.egg-info/requires.txt 2021-08-26T15:25:31,098 writing sequana.egg-info/PKG-INFO 2021-08-26T15:25:31,104 writing top-level names to sequana.egg-info/top_level.txt 2021-08-26T15:25:31,108 writing entry points to sequana.egg-info/entry_points.txt 2021-08-26T15:25:31,112 writing dependency_links to sequana.egg-info/dependency_links.txt 2021-08-26T15:25:31,408 reading manifest file 'sequana.egg-info/SOURCES.txt' 2021-08-26T15:25:31,444 reading manifest template 'MANIFEST.in' 2021-08-26T15:25:31,454 warning: no previously-included files matching '__pycache__' found under directory '*' 2021-08-26T15:25:31,462 warning: no previously-included files matching '*pyc' found under directory '*' 2021-08-26T15:25:36,552 warning: no previously-included files matching '*' found under directory 'sequana/methylation' 2021-08-26T15:25:36,559 warning: no previously-included files matching '*' found under directory 'test' 2021-08-26T15:25:36,566 warning: no previously-included files found matching 'sequana/rm2.py' 2021-08-26T15:25:36,656 writing manifest file 'sequana.egg-info/SOURCES.txt' 2021-08-26T15:25:36,663 Copying sequana.egg-info to build/bdist.linux-armv7l/wheel/sequana-0.12.0-py3.5.egg-info 2021-08-26T15:25:36,710 running install_scripts 2021-08-26T15:25:37,054 creating build/bdist.linux-armv7l/wheel/sequana-0.12.0.dist-info/WHEEL 2021-08-26T15:25:45,123 Building wheel for sequana (setup.py): finished with status 'done' 2021-08-26T15:25:45,354 Created wheel for sequana: filename=sequana-0.12.0-py3-none-any.whl size=13886734 sha256=e3ed03ed6d351f0d71eb767334572208493bb8a0b3a309f35f202a756f5feec9 2021-08-26T15:25:45,355 Stored in directory: /tmp/pip-ephem-wheel-cache-iq53wj55/wheels/2a/3f/28/b1c6b7107c5d9425aed198034467fb74bdf98deea94d9981a3 2021-08-26T15:25:45,428 Successfully built sequana 2021-08-26T15:25:47,833 Removed build tracker: '/tmp/pip-req-tracker-x8_h9pti'