2021-09-01T17:03:18,770 Created temporary directory: /tmp/pip-ephem-wheel-cache-8v1o6hlv
2021-09-01T17:03:18,776 Created temporary directory: /tmp/pip-req-tracker-u3o37g8z
2021-09-01T17:03:18,777 Initialized build tracking at /tmp/pip-req-tracker-u3o37g8z
2021-09-01T17:03:18,777 Created build tracker: /tmp/pip-req-tracker-u3o37g8z
2021-09-01T17:03:18,777 Entered build tracker: /tmp/pip-req-tracker-u3o37g8z
2021-09-01T17:03:18,779 Created temporary directory: /tmp/pip-wheel-b8ek6hh4
2021-09-01T17:03:18,839 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-09-01T17:03:18,842 2 location(s) to search for versions of damona:
2021-09-01T17:03:18,842 * https://pypi.org/simple/damona/
2021-09-01T17:03:18,842 * https://www.piwheels.org/simple/damona/
2021-09-01T17:03:18,843 Fetching project page and analyzing links: https://pypi.org/simple/damona/
2021-09-01T17:03:18,845 Getting page https://pypi.org/simple/damona/
2021-09-01T17:03:18,849 Found index url https://pypi.org/simple
2021-09-01T17:03:19,186   Found link https://files.pythonhosted.org/packages/cd/9e/27ac1c5e27caa58f2d161dff75c5c4cdd92670440b07e7709802a9459b9c/damona-0.1.0.tar.gz#sha256=ffd1316e321796f0fa5a56b54f75dd4f5d927ecf0bc9c1a336f160f038ae6890 (from https://pypi.org/simple/damona/), version: 0.1.0
2021-09-01T17:03:19,188   Found link https://files.pythonhosted.org/packages/c9/20/7fe4d2f1c34300ed845a3b033a8cd8b3de72b82a25599330b10e2317ca48/damona-0.1.1.tar.gz#sha256=b5c70b83f51e4d32f2f3dda532abf3713a177b8e5ef7a0b26a44a801a0313236 (from https://pypi.org/simple/damona/), version: 0.1.1
2021-09-01T17:03:19,189   Found link https://files.pythonhosted.org/packages/36/9b/153b2e8849b6cf3b78ac13c3e30fbd4f1774c31b7b34cb849eb3a14bf69c/damona-0.2.0.tar.gz#sha256=6023b50d62eb18c216383a96021bf88cdf651ebc741397892b74bc49d642bdc1 (from https://pypi.org/simple/damona/), version: 0.2.0
2021-09-01T17:03:19,190   Found link https://files.pythonhosted.org/packages/5d/85/e936fbc729383625e399b7dabd3238995c915084986ec573588855c921ee/damona-0.2.1.tar.gz#sha256=69aa6cb1042ad0bf06363f68867de0fec1be4cf717d73574829d15967fadf019 (from https://pypi.org/simple/damona/), version: 0.2.1
2021-09-01T17:03:19,190   Found link https://files.pythonhosted.org/packages/d8/72/c819e18fd5dcf8abe904e97240b4adb023e80b73a311ca4cddd0f8b6509c/damona-0.2.2.tar.gz#sha256=e8eced44b5c69ff5c0b87977969c0942017163e78203fcdccd8591c5d78a7a22 (from https://pypi.org/simple/damona/), version: 0.2.2
2021-09-01T17:03:19,191   Found link https://files.pythonhosted.org/packages/2a/2f/3eca4d23aad1c0df2a1f708f49fd68de86b47fb3ff0b7270182074adbe24/damona-0.3.0.tar.gz#sha256=d87f56f4c50b9f87c6ef42a8c2ee9642e404889894524acd879dbfa301d88477 (from https://pypi.org/simple/damona/), version: 0.3.0
2021-09-01T17:03:19,192   Found link https://files.pythonhosted.org/packages/a4/85/cf3ba30aadaf7e322c200ff61874eb24a3ded6d64ad308d15760d26338f1/damona-0.3.1.tar.gz#sha256=a99d48dcfb750e079771ae08e93ade1b0223cc08744cc65bf5d9623771c74439 (from https://pypi.org/simple/damona/), version: 0.3.1
2021-09-01T17:03:19,193   Found link https://files.pythonhosted.org/packages/c2/ef/1a8417b608f9a1f46749cea5ef2cd0bef0e2e9449182baa65ef403b9bd6e/damona-0.4.0.tar.gz#sha256=533275af540923fe2ff8a67b0ee49852cfa322880906e32461b79019aecf444e (from https://pypi.org/simple/damona/), version: 0.4.0
2021-09-01T17:03:19,194   Found link https://files.pythonhosted.org/packages/66/87/cc314bac96ca0afc29e95d91a07d70c56df5c37cb4209f8bfc4eb959418a/damona-0.4.1.tar.gz#sha256=cc5f816a84aca53cae91d7c851a2023bbea9f9f6bf5c8a3f4ac2a3d5f7588340 (from https://pypi.org/simple/damona/), version: 0.4.1
2021-09-01T17:03:19,195   Found link https://files.pythonhosted.org/packages/50/5a/2b91d89732ad7eabd61d2060de0ecc94c4a04c25999f199d2cb93ff943e5/damona-0.4.2.tar.gz#sha256=13f160a7c327acad47e006164bd84e766c94e36f50fe0eef3617a0031b1a2a5f (from https://pypi.org/simple/damona/), version: 0.4.2
2021-09-01T17:03:19,196   Found link https://files.pythonhosted.org/packages/e5/d8/0d4fe942e4a6dd2b5a45ac16a038f99dbea115dde61c41aec5f2815ef2a6/damona-0.4.3.tar.gz#sha256=ccd9e632ac9e87e2dd4774cad490a80de8c91391ca9f1f42ca44f27a41782edc (from https://pypi.org/simple/damona/), version: 0.4.3
2021-09-01T17:03:19,197   Found link https://files.pythonhosted.org/packages/9e/e0/d085c328e8cc39ca40e2176f3c5c5ffeb66e1271abeeb36f863c5acb8bc1/damona-0.5.0.tar.gz#sha256=6742de042d81a26a288ad91fb2824fd5cede8f6f2d593238ab65ef88ddb85108 (from https://pypi.org/simple/damona/), version: 0.5.0
2021-09-01T17:03:19,198   Found link https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz#sha256=3d74601d8dc7e8fea702c5932b8eb699b1e0496e01cd714051e05a63de254694 (from https://pypi.org/simple/damona/), version: 0.5.1
2021-09-01T17:03:19,198 Fetching project page and analyzing links: https://www.piwheels.org/simple/damona/
2021-09-01T17:03:19,199 Getting page https://www.piwheels.org/simple/damona/
2021-09-01T17:03:19,202 Found index url https://www.piwheels.org/simple
2021-09-01T17:03:19,371   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.2.2-py3-none-any.whl#sha256=9165891e105689e76d95ddf46067837a1ee8b13d1d3af36b5af846c1b8ee4b92 (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,372   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.0-py3-none-any.whl#sha256=b9bad2b5e81d6bdca4b895a2d7dfcd19a5450509889904d9840f447a3a5a5f11 (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,372   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.1-py3-none-any.whl#sha256=934799d1cf5a920bc199416dc79952e268359cc4ad20d561571fd85e4c2d84dc (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,373   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.0-py3-none-any.whl#sha256=131eb91e5a14664d9a717ad2a12025787ed02a761336318d57de6076bbfe0695 (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,374   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.1-py3-none-any.whl#sha256=87fafcd2a349a2c12e3f28edb48015a402a3e50f89c4da8072167483d0d7a200 (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,374   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.2-py3-none-any.whl#sha256=326ee5f5e021f463128cc57ff6f3ff6129f46271dfaf4f823a5645f2e94d7aa4 (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,375   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.3-py3-none-any.whl#sha256=7b05aa70e5bb4664074b7b3d9b63873f9aa72e29217bf7a971614685c338107e (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,375   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.0-py3-none-any.whl#sha256=2b105c2097bf8572e7d57f7b842123852413d4d1266886b21d4f1e94b0d25109 (from https://www.piwheels.org/simple/damona/)
2021-09-01T17:03:19,409 Given no hashes to check 1 links for project 'damona': discarding no candidates
2021-09-01T17:03:19,441 Collecting damona==0.5.1
2021-09-01T17:03:19,445   Created temporary directory: /tmp/pip-unpack-ymgxsy89
2021-09-01T17:03:19,678   Downloading damona-0.5.1.tar.gz (54 kB)
2021-09-01T17:03:20,350   Added damona==0.5.1 from https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz#sha256=3d74601d8dc7e8fea702c5932b8eb699b1e0496e01cd714051e05a63de254694 to build tracker '/tmp/pip-req-tracker-u3o37g8z'
2021-09-01T17:03:20,352     Running setup.py (path:/tmp/pip-wheel-b8ek6hh4/damona_45219902c2da4dbdab6db7a2b85fbfeb/setup.py) egg_info for package damona
2021-09-01T17:03:20,354     Created temporary directory: /tmp/pip-pip-egg-info-f8rvohsc
2021-09-01T17:03:20,354     Running command python setup.py egg_info
2021-09-01T17:03:22,676     running egg_info
2021-09-01T17:03:22,682     creating /tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info
2021-09-01T17:03:22,686     writing requirements to /tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/requires.txt
2021-09-01T17:03:22,688     writing top-level names to /tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/top_level.txt
2021-09-01T17:03:22,690     writing /tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/PKG-INFO
2021-09-01T17:03:22,697     writing dependency_links to /tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/dependency_links.txt
2021-09-01T17:03:22,700     writing entry points to /tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/entry_points.txt
2021-09-01T17:03:22,705     writing manifest file '/tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/SOURCES.txt'
2021-09-01T17:03:23,111     reading manifest file '/tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/SOURCES.txt'
2021-09-01T17:03:23,114     reading manifest template 'MANIFEST.in'
2021-09-01T17:03:23,117     warning: no previously-included files matching '__pycache__' found under directory '*'
2021-09-01T17:03:23,119     warning: no previously-included files matching '*pyc' found under directory '*'
2021-09-01T17:03:23,137     writing manifest file '/tmp/pip-pip-egg-info-f8rvohsc/damona.egg-info/SOURCES.txt'
2021-09-01T17:03:23,296   Source in /tmp/pip-wheel-b8ek6hh4/damona_45219902c2da4dbdab6db7a2b85fbfeb has version 0.5.1, which satisfies requirement damona==0.5.1 from https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz#sha256=3d74601d8dc7e8fea702c5932b8eb699b1e0496e01cd714051e05a63de254694
2021-09-01T17:03:23,298   Removed damona==0.5.1 from https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz#sha256=3d74601d8dc7e8fea702c5932b8eb699b1e0496e01cd714051e05a63de254694 from build tracker '/tmp/pip-req-tracker-u3o37g8z'
2021-09-01T17:03:23,312 Created temporary directory: /tmp/pip-unpack-6aqa3yii
2021-09-01T17:03:23,313 Building wheels for collected packages: damona
2021-09-01T17:03:23,322   Created temporary directory: /tmp/pip-wheel-w1v1s6nm
2021-09-01T17:03:23,324   Building wheel for damona (setup.py): started
2021-09-01T17:03:23,324   Destination directory: /tmp/pip-wheel-w1v1s6nm
2021-09-01T17:03:23,325   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b8ek6hh4/damona_45219902c2da4dbdab6db7a2b85fbfeb/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b8ek6hh4/damona_45219902c2da4dbdab6db7a2b85fbfeb/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-w1v1s6nm
2021-09-01T17:03:25,677   running bdist_wheel
2021-09-01T17:03:25,684   running build
2021-09-01T17:03:25,685   running build_py
2021-09-01T17:03:26,002   creating build
2021-09-01T17:03:26,003   creating build/lib
2021-09-01T17:03:26,005   creating build/lib/damona
2021-09-01T17:03:26,007   copying damona/common.py -> build/lib/damona
2021-09-01T17:03:26,013   copying damona/builders.py -> build/lib/damona
2021-09-01T17:03:26,018   copying damona/registry.py -> build/lib/damona
2021-09-01T17:03:26,023   copying damona/config.py -> build/lib/damona
2021-09-01T17:03:26,028   copying damona/colors.py -> build/lib/damona
2021-09-01T17:03:26,035   copying damona/script.py -> build/lib/damona
2021-09-01T17:03:26,042   copying damona/__init__.py -> build/lib/damona
2021-09-01T17:03:26,048   copying damona/install.py -> build/lib/damona
2021-09-01T17:03:26,056   copying damona/environ.py -> build/lib/damona
2021-09-01T17:03:26,064   creating build/lib/damona/recipes
2021-09-01T17:03:26,067   copying damona/recipes/__init__.py -> build/lib/damona/recipes
2021-09-01T17:03:26,141   creating build/lib/damona/recipes/quast
2021-09-01T17:03:26,143   copying damona/recipes/quast/Singularity.quast_5.0.2 -> build/lib/damona/recipes/quast
2021-09-01T17:03:26,149   creating build/lib/damona/recipes/minimap2
2021-09-01T17:03:26,150   copying damona/recipes/minimap2/Singularity.minimap2_2.17.0 -> build/lib/damona/recipes/minimap2
2021-09-01T17:03:26,155   creating build/lib/damona/recipes/rtools
2021-09-01T17:03:26,157   copying damona/recipes/rtools/Singularity.Rtools_1.1.0 -> build/lib/damona/recipes/rtools
2021-09-01T17:03:26,164   copying damona/recipes/rtools/Singularity.Rtools_1.0.0 -> build/lib/damona/recipes/rtools
2021-09-01T17:03:26,170   creating build/lib/damona/recipes/sequana
2021-09-01T17:03:26,173   copying damona/recipes/sequana/Singularity.sequana_0.9.1 -> build/lib/damona/recipes/sequana
2021-09-01T17:03:26,180   copying damona/recipes/sequana/Singularity.sequana_0.10.0 -> build/lib/damona/recipes/sequana
2021-09-01T17:03:26,187   creating build/lib/damona/recipes/R
2021-09-01T17:03:26,189   copying damona/recipes/R/Singularity.R_3.6.3 -> build/lib/damona/recipes/R
2021-09-01T17:03:26,196   copying damona/recipes/R/Singularity.R_4.0.2 -> build/lib/damona/recipes/R
2021-09-01T17:03:26,203   creating build/lib/damona/recipes/rnadiff
2021-09-01T17:03:26,205   copying damona/recipes/rnadiff/Singularity.rnadiff_1.7.1 -> build/lib/damona/recipes/rnadiff
2021-09-01T17:03:26,212   creating build/lib/damona/recipes/art
2021-09-01T17:03:26,215   copying damona/recipes/art/Singularity.art_3.11.14 -> build/lib/damona/recipes/art
2021-09-01T17:03:26,222   copying damona/recipes/art/Singularity.art_2.5.8 -> build/lib/damona/recipes/art
2021-09-01T17:03:26,228   creating build/lib/damona/recipes/canu
2021-09-01T17:03:26,230   copying damona/recipes/canu/Singularity.canu_1.6.0 -> build/lib/damona/recipes/canu
2021-09-01T17:03:26,237   copying damona/recipes/canu/Singularity.canu_1.8.0 -> build/lib/damona/recipes/canu
2021-09-01T17:03:26,242   creating build/lib/damona/recipes/deseq
2021-09-01T17:03:26,244   copying damona/recipes/deseq/Singularity.deseq2_2.0.0 -> build/lib/damona/recipes/deseq
2021-09-01T17:03:26,249   creating build/lib/damona/recipes/ubuntu
2021-09-01T17:03:26,251   copying damona/recipes/ubuntu/Singularity.ubuntu_16.04 -> build/lib/damona/recipes/ubuntu
2021-09-01T17:03:26,256   copying damona/recipes/ubuntu/Singularity.ubuntu_18.04 -> build/lib/damona/recipes/ubuntu
2021-09-01T17:03:26,260   creating build/lib/damona/recipes/ucsc
2021-09-01T17:03:26,262   copying damona/recipes/ucsc/Singularity.ucsc_0.1.0 -> build/lib/damona/recipes/ucsc
2021-09-01T17:03:26,267   creating build/lib/damona/recipes/kraken
2021-09-01T17:03:26,269   copying damona/recipes/kraken/Singularity.kraken_1.1 -> build/lib/damona/recipes/kraken
2021-09-01T17:03:26,274   copying damona/recipes/kraken/Singularity.kraken_2.0.9 -> build/lib/damona/recipes/kraken
2021-09-01T17:03:26,278   creating build/lib/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,280   copying damona/recipes/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/lib/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,285   copying damona/recipes/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/lib/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,290   creating build/lib/damona/recipes/damona
2021-09-01T17:03:26,291   copying damona/recipes/damona/Singularity.damona_0.3.0 -> build/lib/damona/recipes/damona
2021-09-01T17:03:26,296   copying damona/recipes/damona/Singularity.damona_0.4.2 -> build/lib/damona/recipes/damona
2021-09-01T17:03:26,301   creating build/lib/damona/recipes/conda
2021-09-01T17:03:26,303   copying damona/recipes/conda/Singularity.conda_4.7.12 -> build/lib/damona/recipes/conda
2021-09-01T17:03:26,308   copying damona/recipes/conda/Singularity.conda_4.9.2 -> build/lib/damona/recipes/conda
2021-09-01T17:03:26,312   creating build/lib/damona/recipes/rnaseqc
2021-09-01T17:03:26,314   copying damona/recipes/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/lib/damona/recipes/rnaseqc
2021-09-01T17:03:26,319   creating build/lib/damona/recipes/sequana_tools
2021-09-01T17:03:26,321   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/lib/damona/recipes/sequana_tools
2021-09-01T17:03:26,326   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/lib/damona/recipes/sequana_tools
2021-09-01T17:03:26,331   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/lib/damona/recipes/sequana_tools
2021-09-01T17:03:26,336   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/lib/damona/recipes/sequana_tools
2021-09-01T17:03:26,340   creating build/lib/damona/recipes/trf
2021-09-01T17:03:26,342   copying damona/recipes/trf/Singularity.trf_4.10.0 -> build/lib/damona/recipes/trf
2021-09-01T17:03:26,347   copying damona/recipes/trf/Singularity.trf_4.09 -> build/lib/damona/recipes/trf
2021-09-01T17:03:26,352   creating build/lib/damona/recipes/fastqc
2021-09-01T17:03:26,354   copying damona/recipes/fastqc/Singularity.fastqc_0.11.9 -> build/lib/damona/recipes/fastqc
2021-09-01T17:03:26,359   copying damona/recipes/fastqc/Singularity.fastqc_0.11.8 -> build/lib/damona/recipes/fastqc
2021-09-01T17:03:26,363   creating build/lib/damona/recipes/prokka
2021-09-01T17:03:26,365   copying damona/recipes/prokka/Singularity.prokka_1.14.5 -> build/lib/damona/recipes/prokka
2021-09-01T17:03:26,370   creating build/lib/damona/recipes/falco
2021-09-01T17:03:26,372   copying damona/recipes/falco/Singularity.falco_0.2.1 -> build/lib/damona/recipes/falco
2021-09-01T17:03:26,377   creating build/lib/damona/recipes/bcl2fastq
2021-09-01T17:03:26,379   copying damona/recipes/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/lib/damona/recipes/bcl2fastq
2021-09-01T17:03:26,384   creating build/lib/damona/recipes/phantompeakqualtools
2021-09-01T17:03:26,386   copying damona/recipes/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/lib/damona/recipes/phantompeakqualtools
2021-09-01T17:03:26,391   creating build/lib/damona/recipes/graphviz
2021-09-01T17:03:26,393   copying damona/recipes/graphviz/Singularity.graphviz_2.43.0 -> build/lib/damona/recipes/graphviz
2021-09-01T17:03:26,398   creating build/lib/damona/recipes/gffread
2021-09-01T17:03:26,399   copying damona/recipes/gffread/Singularity.gffread_0.12.1 -> build/lib/damona/recipes/gffread
2021-09-01T17:03:26,404   creating build/lib/damona/recipes/salmon
2021-09-01T17:03:26,406   copying damona/recipes/salmon/Singularity.salmon_1.3.0 -> build/lib/damona/recipes/salmon
2021-09-01T17:03:26,411   copying damona/recipes/quast/registry.yaml -> build/lib/damona/recipes/quast
2021-09-01T17:03:26,416   copying damona/recipes/minimap2/registry.yaml -> build/lib/damona/recipes/minimap2
2021-09-01T17:03:26,420   copying damona/recipes/rtools/registry.yaml -> build/lib/damona/recipes/rtools
2021-09-01T17:03:26,425   copying damona/recipes/sequana/registry.yaml -> build/lib/damona/recipes/sequana
2021-09-01T17:03:26,430   copying damona/recipes/R/registry.yaml -> build/lib/damona/recipes/R
2021-09-01T17:03:26,437   copying damona/recipes/rnadiff/registry.yaml -> build/lib/damona/recipes/rnadiff
2021-09-01T17:03:26,441   copying damona/recipes/art/registry.yaml -> build/lib/damona/recipes/art
2021-09-01T17:03:26,447   copying damona/recipes/canu/registry.yaml -> build/lib/damona/recipes/canu
2021-09-01T17:03:26,453   copying damona/recipes/deseq/registry.yaml -> build/lib/damona/recipes/deseq
2021-09-01T17:03:26,460   copying damona/recipes/ubuntu/registry.yaml -> build/lib/damona/recipes/ubuntu
2021-09-01T17:03:26,466   copying damona/recipes/ucsc/registry.yaml -> build/lib/damona/recipes/ucsc
2021-09-01T17:03:26,470   copying damona/recipes/kraken/registry.yaml -> build/lib/damona/recipes/kraken
2021-09-01T17:03:26,475   copying damona/recipes/sequana_perl_tools/registry.yaml -> build/lib/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,479   creating build/lib/damona/recipes/hisat2
2021-09-01T17:03:26,481   copying damona/recipes/hisat2/registry.yaml -> build/lib/damona/recipes/hisat2
2021-09-01T17:03:26,486   copying damona/recipes/damona/registry.yaml -> build/lib/damona/recipes/damona
2021-09-01T17:03:26,491   copying damona/recipes/conda/registry.yaml -> build/lib/damona/recipes/conda
2021-09-01T17:03:26,496   copying damona/recipes/rnaseqc/registry.yaml -> build/lib/damona/recipes/rnaseqc
2021-09-01T17:03:26,501   copying damona/recipes/sequana_tools/registry.yaml -> build/lib/damona/recipes/sequana_tools
2021-09-01T17:03:26,506   copying damona/recipes/trf/registry.yaml -> build/lib/damona/recipes/trf
2021-09-01T17:03:26,511   copying damona/recipes/fastqc/registry.yaml -> build/lib/damona/recipes/fastqc
2021-09-01T17:03:26,516   copying damona/recipes/prokka/registry.yaml -> build/lib/damona/recipes/prokka
2021-09-01T17:03:26,520   copying damona/recipes/falco/registry.yaml -> build/lib/damona/recipes/falco
2021-09-01T17:03:26,525   copying damona/recipes/bcl2fastq/registry.yaml -> build/lib/damona/recipes/bcl2fastq
2021-09-01T17:03:26,529   copying damona/recipes/phantompeakqualtools/registry.yaml -> build/lib/damona/recipes/phantompeakqualtools
2021-09-01T17:03:26,534   copying damona/recipes/graphviz/registry.yaml -> build/lib/damona/recipes/graphviz
2021-09-01T17:03:26,539   copying damona/recipes/gffread/registry.yaml -> build/lib/damona/recipes/gffread
2021-09-01T17:03:26,544   copying damona/recipes/salmon/registry.yaml -> build/lib/damona/recipes/salmon
2021-09-01T17:03:26,554   installing to build/bdist.linux-armv7l/wheel
2021-09-01T17:03:26,554   running install
2021-09-01T17:03:26,556   running install_lib
2021-09-01T17:03:26,565   creating build/bdist.linux-armv7l
2021-09-01T17:03:26,565   creating build/bdist.linux-armv7l/wheel
2021-09-01T17:03:26,569   creating build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,571   copying build/lib/damona/common.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,577   copying build/lib/damona/builders.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,582   copying build/lib/damona/registry.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,588   copying build/lib/damona/config.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,592   copying build/lib/damona/colors.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,596   copying build/lib/damona/script.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,603   copying build/lib/damona/__init__.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,607   copying build/lib/damona/install.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,615   copying build/lib/damona/environ.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-01T17:03:26,625   creating build/bdist.linux-armv7l/wheel/damona/recipes
2021-09-01T17:03:26,628   creating build/bdist.linux-armv7l/wheel/damona/recipes/quast
2021-09-01T17:03:26,630   copying build/lib/damona/recipes/quast/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/quast
2021-09-01T17:03:26,635   copying build/lib/damona/recipes/quast/Singularity.quast_5.0.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/quast
2021-09-01T17:03:26,640   creating build/bdist.linux-armv7l/wheel/damona/recipes/minimap2
2021-09-01T17:03:26,642   copying build/lib/damona/recipes/minimap2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/minimap2
2021-09-01T17:03:26,646   copying build/lib/damona/recipes/minimap2/Singularity.minimap2_2.17.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/minimap2
2021-09-01T17:03:26,651   creating build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-01T17:03:26,653   copying build/lib/damona/recipes/rtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-01T17:03:26,657   copying build/lib/damona/recipes/rtools/Singularity.Rtools_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-01T17:03:26,661   copying build/lib/damona/recipes/rtools/Singularity.Rtools_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-01T17:03:26,667   creating build/bdist.linux-armv7l/wheel/damona/recipes/sequana
2021-09-01T17:03:26,668   copying build/lib/damona/recipes/sequana/Singularity.sequana_0.9.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana
2021-09-01T17:03:26,673   copying build/lib/damona/recipes/sequana/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana
2021-09-01T17:03:26,677   copying build/lib/damona/recipes/sequana/Singularity.sequana_0.10.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana
2021-09-01T17:03:26,682   creating build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-01T17:03:26,684   copying build/lib/damona/recipes/R/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-01T17:03:26,688   copying build/lib/damona/recipes/R/Singularity.R_3.6.3 -> build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-01T17:03:26,692   copying build/lib/damona/recipes/R/Singularity.R_4.0.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-01T17:03:26,698   creating build/bdist.linux-armv7l/wheel/damona/recipes/rnadiff
2021-09-01T17:03:26,699   copying build/lib/damona/recipes/rnadiff/Singularity.rnadiff_1.7.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/rnadiff
2021-09-01T17:03:26,704   copying build/lib/damona/recipes/rnadiff/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/rnadiff
2021-09-01T17:03:26,709   creating build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-01T17:03:26,710   copying build/lib/damona/recipes/art/Singularity.art_3.11.14 -> build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-01T17:03:26,715   copying build/lib/damona/recipes/art/Singularity.art_2.5.8 -> build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-01T17:03:26,718   copying build/lib/damona/recipes/art/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-01T17:03:26,723   creating build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-01T17:03:26,725   copying build/lib/damona/recipes/canu/Singularity.canu_1.6.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-01T17:03:26,729   copying build/lib/damona/recipes/canu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-01T17:03:26,733   copying build/lib/damona/recipes/canu/Singularity.canu_1.8.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-01T17:03:26,738   creating build/bdist.linux-armv7l/wheel/damona/recipes/deseq
2021-09-01T17:03:26,740   copying build/lib/damona/recipes/deseq/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/deseq
2021-09-01T17:03:26,745   copying build/lib/damona/recipes/deseq/Singularity.deseq2_2.0.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/deseq
2021-09-01T17:03:26,750   creating build/bdist.linux-armv7l/wheel/damona/recipes/ubuntu
2021-09-01T17:03:26,752   copying build/lib/damona/recipes/ubuntu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/ubuntu
2021-09-01T17:03:26,756   copying build/lib/damona/recipes/ubuntu/Singularity.ubuntu_16.04 -> build/bdist.linux-armv7l/wheel/damona/recipes/ubuntu
2021-09-01T17:03:26,760   copying build/lib/damona/recipes/ubuntu/Singularity.ubuntu_18.04 -> build/bdist.linux-armv7l/wheel/damona/recipes/ubuntu
2021-09-01T17:03:26,765   creating build/bdist.linux-armv7l/wheel/damona/recipes/ucsc
2021-09-01T17:03:26,767   copying build/lib/damona/recipes/ucsc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/ucsc
2021-09-01T17:03:26,771   copying build/lib/damona/recipes/ucsc/Singularity.ucsc_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/ucsc
2021-09-01T17:03:26,776   creating build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-01T17:03:26,778   copying build/lib/damona/recipes/kraken/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-01T17:03:26,782   copying build/lib/damona/recipes/kraken/Singularity.kraken_1.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-01T17:03:26,786   copying build/lib/damona/recipes/kraken/Singularity.kraken_2.0.9 -> build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-01T17:03:26,790   copying build/lib/damona/recipes/__init__.py -> build/bdist.linux-armv7l/wheel/damona/recipes
2021-09-01T17:03:26,795   creating build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,797   copying build/lib/damona/recipes/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,801   copying build/lib/damona/recipes/sequana_perl_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,805   copying build/lib/damona/recipes/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-01T17:03:26,810   creating build/bdist.linux-armv7l/wheel/damona/recipes/hisat2
2021-09-01T17:03:26,811   copying build/lib/damona/recipes/hisat2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/hisat2
2021-09-01T17:03:26,817   creating build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-01T17:03:26,818   copying build/lib/damona/recipes/damona/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-01T17:03:26,823   copying build/lib/damona/recipes/damona/Singularity.damona_0.3.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-01T17:03:26,827   copying build/lib/damona/recipes/damona/Singularity.damona_0.4.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-01T17:03:26,832   creating build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-01T17:03:26,833   copying build/lib/damona/recipes/conda/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-01T17:03:26,837   copying build/lib/damona/recipes/conda/Singularity.conda_4.7.12 -> build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-01T17:03:26,842   copying build/lib/damona/recipes/conda/Singularity.conda_4.9.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-01T17:03:26,847   creating build/bdist.linux-armv7l/wheel/damona/recipes/rnaseqc
2021-09-01T17:03:26,849   copying build/lib/damona/recipes/rnaseqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/rnaseqc
2021-09-01T17:03:26,853   copying build/lib/damona/recipes/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/rnaseqc
2021-09-01T17:03:26,858   creating build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-01T17:03:26,860   copying build/lib/damona/recipes/sequana_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-01T17:03:26,864   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-01T17:03:26,868   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-01T17:03:26,872   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-01T17:03:26,876   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-01T17:03:26,881   creating build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-01T17:03:26,883   copying build/lib/damona/recipes/trf/Singularity.trf_4.10.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-01T17:03:26,888   copying build/lib/damona/recipes/trf/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-01T17:03:26,891   copying build/lib/damona/recipes/trf/Singularity.trf_4.09 -> build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-01T17:03:26,896   creating build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-01T17:03:26,898   copying build/lib/damona/recipes/fastqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-01T17:03:26,903   copying build/lib/damona/recipes/fastqc/Singularity.fastqc_0.11.9 -> build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-01T17:03:26,906   copying build/lib/damona/recipes/fastqc/Singularity.fastqc_0.11.8 -> build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-01T17:03:26,912   creating build/bdist.linux-armv7l/wheel/damona/recipes/prokka
2021-09-01T17:03:26,914   copying build/lib/damona/recipes/prokka/Singularity.prokka_1.14.5 -> build/bdist.linux-armv7l/wheel/damona/recipes/prokka
2021-09-01T17:03:26,918   copying build/lib/damona/recipes/prokka/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/prokka
2021-09-01T17:03:26,923   creating build/bdist.linux-armv7l/wheel/damona/recipes/falco
2021-09-01T17:03:26,925   copying build/lib/damona/recipes/falco/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/falco
2021-09-01T17:03:26,930   copying build/lib/damona/recipes/falco/Singularity.falco_0.2.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/falco
2021-09-01T17:03:26,935   creating build/bdist.linux-armv7l/wheel/damona/recipes/bcl2fastq
2021-09-01T17:03:26,937   copying build/lib/damona/recipes/bcl2fastq/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/bcl2fastq
2021-09-01T17:03:26,941   copying build/lib/damona/recipes/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/bcl2fastq
2021-09-01T17:03:26,946   creating build/bdist.linux-armv7l/wheel/damona/recipes/phantompeakqualtools
2021-09-01T17:03:26,948   copying build/lib/damona/recipes/phantompeakqualtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/phantompeakqualtools
2021-09-01T17:03:26,953   copying build/lib/damona/recipes/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/phantompeakqualtools
2021-09-01T17:03:26,958   creating build/bdist.linux-armv7l/wheel/damona/recipes/graphviz
2021-09-01T17:03:26,960   copying build/lib/damona/recipes/graphviz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/graphviz
2021-09-01T17:03:26,964   copying build/lib/damona/recipes/graphviz/Singularity.graphviz_2.43.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/graphviz
2021-09-01T17:03:26,970   creating build/bdist.linux-armv7l/wheel/damona/recipes/gffread
2021-09-01T17:03:26,972   copying build/lib/damona/recipes/gffread/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/gffread
2021-09-01T17:03:26,976   copying build/lib/damona/recipes/gffread/Singularity.gffread_0.12.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/gffread
2021-09-01T17:03:26,981   creating build/bdist.linux-armv7l/wheel/damona/recipes/salmon
2021-09-01T17:03:26,983   copying build/lib/damona/recipes/salmon/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/salmon
2021-09-01T17:03:26,987   copying build/lib/damona/recipes/salmon/Singularity.salmon_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/salmon
2021-09-01T17:03:26,991   running install_egg_info
2021-09-01T17:03:27,001   running egg_info
2021-09-01T17:03:27,003   writing entry points to damona.egg-info/entry_points.txt
2021-09-01T17:03:27,006   writing top-level names to damona.egg-info/top_level.txt
2021-09-01T17:03:27,008   writing dependency_links to damona.egg-info/dependency_links.txt
2021-09-01T17:03:27,011   writing damona.egg-info/PKG-INFO
2021-09-01T17:03:27,017   writing requirements to damona.egg-info/requires.txt
2021-09-01T17:03:27,037   reading manifest file 'damona.egg-info/SOURCES.txt'
2021-09-01T17:03:27,046   reading manifest template 'MANIFEST.in'
2021-09-01T17:03:27,050   warning: no previously-included files matching '__pycache__' found under directory '*'
2021-09-01T17:03:27,052   warning: no previously-included files matching '*pyc' found under directory '*'
2021-09-01T17:03:27,074   writing manifest file 'damona.egg-info/SOURCES.txt'
2021-09-01T17:03:27,078   Copying damona.egg-info to build/bdist.linux-armv7l/wheel/damona-0.5.1-py3.5.egg-info
2021-09-01T17:03:27,116   running install_scripts
2021-09-01T17:03:27,241   creating build/bdist.linux-armv7l/wheel/damona-0.5.1.dist-info/WHEEL
2021-09-01T17:03:27,841   Building wheel for damona (setup.py): finished with status 'done'
2021-09-01T17:03:27,846   Created wheel for damona: filename=damona-0.5.1-py3-none-any.whl size=76395 sha256=5a3fb6b370b13c5085238e60671c083d51b2afa8ca94314f8c382b46b4fecc0a
2021-09-01T17:03:27,847   Stored in directory: /tmp/pip-ephem-wheel-cache-8v1o6hlv/wheels/d6/41/98/2e9ab0d4b11da6c7cf2aef44ff51501e62c694a65e12f543aa
2021-09-01T17:03:27,874 Successfully built damona
2021-09-01T17:03:27,891 Removed build tracker: '/tmp/pip-req-tracker-u3o37g8z'